pycom03g14440

long-chain-alcohol O-fatty-acyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0017348
Physical Location & Seq
Forward (+)
15764236 .. 15765342
1107 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g14440.1

Sequence Viewer

Length: 1107 bp
ATGAAACAAATTAAAAGAGTATCAATCAATCAACCGATCATGGGATCAATGGAGGAAGAAATCAAGAGCTTAATCAAGGTATGCCTTTCCATCTTTGCCTCTCTTTGCTACACCTATTTCATAGCTTCTAAAATCCCCAAAGGCAAACTCAGGCTCCTCTCTCTCCTCCCTATTTTCTACCTCTTCACCACCCTCCCTCTCTCTCTCTCCACCGCCCTCCCCGCCGGAGTGTTTGCCATGTTCATTACCTGGGTTGGTAGCTTCAAGCTCCTCCTCTTCTCCTTTGGTCATGGCCCACTTTCATCTGACCCACCCCTAAACTCCCTCCTCCTCTTCATCTTCACTGCTTGCCTCCCAATCAAAACATCTCAACAGTTATTTCCAAATTTGGAAAGAACCCCTAAGTTGCCTCTGAATTTGCCAACCAAAATCTTGCTTTTCGGCATATTGGTTGCCCTAACTGACTACAAAAAATATTTGCACCCCAGAATTCTATTAGGTCAGTATTGTTGCATGTTGTATCTTTTTGTGGACGTGTTAGTAGGCGTAGCCAACGCAACGATGCGAGCGGTTCTCGGAATCGAGCTCGAATCGCCGTCCAACGAGCCTTACCTTTCAACTTCGCTACAAGATTTTTGGGGTAGGAGGTGGAACCTTATGATAACAAATACGTTGCGCCAGACTGTGCACAAACCCGTGCGGTCAGCGGCCGAGACCTTCTTGGGGACTGCATGGGCCCCACTGCCGGCCGTGTTAGCCACGTTTTTGGTATCGGGTTTGATGCACGAGCTCATATACTTCTACATGACGCGTGCGACTCCCACCTGGGAGGTTACGTGGTTCTTTGTTCTTCATGGGGTGTGTTTGGTCGTCGAGTTCGGCGTGAAGAAGGCGTTGGGTGGAAGGTGGCGGCTGCATTGGGTTGTGTCAACACCGTTGACCATCGTTTTCGTGGTGGCCACCGCGACTTGGTTGTTCTTTCCACCGTTGGTCGGGAACGGCGTGGATACAAGAGCTATTGAGGAGTGCAAGGAATTGGTAGAATTTGTAAAGCAAAAGTTGAAATGGGACCAATTTTCATGGCCGATCATTTCTTTAGGACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MBOAT_2

Protein Analysis

369

Amino Acids

41.61

Weight (kDa)

9.4

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MBOAT_2 PF13813 201 - 283 1.4e-17 Membrane bound O-acyl transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017348)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44520
malus_domestica MD03G1191400.v1.1
prunus_persica Prupe.4G227300_v2.0.a1
pyrus_communis pycom03g14440
rosa_chinensis RchiOBHm_Chr2g0161741
rosa_laevigata RLG00000021297
rosa_multiflora Rmu_sc0000865.1_g000003 Rmu_sc0003662.1_g000016
rosa_roxburghii Rroxscaffold_2G00088640
rosa_rugosa Rorug02G0491800
rosa_samantha Rh2CG541300 Rh2DG580100
rosa_wichuraiana Rw2G046140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 569
AccII CGCG 2 cut(s) 811, 965
AciI CCGC 7 cut(s) 213, 222, 569, 700, 707, 910, 963
AclWI GGATC 1 cut(s) 52
AcoI YGGCCR 4 cut(s) 708, 747, 957, 1082
AcsI RAATTY 4 cut(s) 385, 415, 489, 1043
AfiI CCNNNNNNNGG 5 cut(s) 41, 723, 745, 969, 992
AflIII ACRYGT 2 cut(s) 534, 809
AgsI TTSAA 3 cut(s) 265, 618, 1063
AjiI CACGTC 1 cut(s) 535
AjnI CCWGG 2 cut(s) 248, 824
AjuI GAANNNNNNNTTGG 2 cut(s) 878, 910
AluBI AGCT 7 cut(s) 69, 125, 261, 268, 586, 790, 1016
AluI AGCT 7 cut(s) 69, 125, 261, 268, 586, 790, 1016
Alw21I GWGCWC 3 cut(s) 588, 690, 792
Alw26I GTCTC 1 cut(s) 707
Alw44I GTGCAC 1 cut(s) 686
AlwI GGATC 1 cut(s) 52
AoxI GGCC 6 cut(s) 292, 708, 735, 747, 957, 1082
ApaI GGGCCC 1 cut(s) 739
ApaLI GTGCAC 1 cut(s) 686
ApeKI GCWGC 1 cut(s) 913
ApoI RAATTY 4 cut(s) 385, 415, 489, 1043
AspLEI GCGC 1 cut(s) 678
AspS9I GGNCC 4 cut(s) 293, 735, 736, 1069
AsuHPI GGTGA 1 cut(s) 178
AvaII GGWCC 1 cut(s) 1069
BaeGI GKGCMC 2 cut(s) 690, 739
BalI TGGCCA 1 cut(s) 959
BanII GRGCYC 3 cut(s) 588, 739, 792
BauI CACGAG 1 cut(s) 785
Bbv12I GWGCWC 3 cut(s) 588, 690, 792
BbvI GCAGC 1 cut(s) 900
BccI CCATC 2 cut(s) 98, 950
BceAI ACGGC 3 cut(s) 580, 734, 1015
BciT130I CCWGG 2 cut(s) 250, 826
BciVI GTATCC 1 cut(s) 1000
BcoDI GTCTC 1 cut(s) 707
BfuI GTATCC 1 cut(s) 1000
BisI GCNGC 3 cut(s) 708, 911, 914
BlsI GCNGC 3 cut(s) 709, 912, 915
Bme1390I CCNGG 2 cut(s) 250, 826
Bme18I GGWCC 1 cut(s) 1069
BmgBI CACGTC 1 cut(s) 535
BmgT120I GGNCC 4 cut(s) 293, 735, 736, 1069
BmiI GGNNCC 5 cut(s) 155, 653, 737, 738, 1070
BmrFI CCNGG 2 cut(s) 250, 826
BmsI GCATC 2 cut(s) 552, 771
BplI GAGNNNNNCTC 2 cut(s) 558, 590
BsaAI YACGTR 1 cut(s) 837
BsaI GGTCTC 1 cut(s) 707
BsaJI CCNNGG 2 cut(s) 249, 825
BsaXI ACNNNNNCTCC 4 cut(s) 138, 168, 821, 851
Bsc4I CCNNNNNNNGG 5 cut(s) 41, 723, 745, 969, 992
Bse118I RCCGGY 1 cut(s) 745
BseBI CCWGG 2 cut(s) 250, 826
BseDI CCNNGG 2 cut(s) 249, 825
BseLI CCNNNNNNNGG 5 cut(s) 41, 723, 745, 969, 992
BseMII CTCAG 1 cut(s) 163
BseRI GAGGAG 7 cut(s) 146, 155, 260, 263, 317, 320, 1037
BseSI GKGCMC 2 cut(s) 690, 739
BseX3I CGGCCG 2 cut(s) 708, 747
BseXI GCAGC 1 cut(s) 900
Bsh1236I CGCG 2 cut(s) 811, 965
Bsh1285I CGRYCG 2 cut(s) 711, 750
BshFI GGCC 6 cut(s) 294, 710, 737, 749, 959, 1084
BsiEI CGRYCG 2 cut(s) 711, 750
BsiHKAI GWGCWC 3 cut(s) 588, 690, 792
BsiSI CCGG 2 cut(s) 225, 746
BslFI GGGAC 2 cut(s) 739, 1082
BslI CCNNNNNNNGG 5 cut(s) 41, 723, 745, 969, 992
BsmAI GTCTC 1 cut(s) 707
BsmFI GGGAC 2 cut(s) 739, 1082
BsnI GGCC 6 cut(s) 294, 710, 737, 749, 959, 1084
Bso31I GGTCTC 1 cut(s) 707
Bsp120I GGGCCC 1 cut(s) 735
Bsp1286I GDGCHC 4 cut(s) 588, 690, 739, 792
Bsp143I GATC 3 cut(s) 36, 44, 1086
BspACI CCGC 7 cut(s) 213, 222, 569, 700, 707, 910, 963
BspANI GGCC 6 cut(s) 294, 710, 737, 749, 959, 1084
BspCNI CTCAG 1 cut(s) 162
BspFNI CGCG 2 cut(s) 811, 965
BspLI GGNNCC 5 cut(s) 155, 653, 737, 738, 1070
BspPI GGATC 1 cut(s) 52
BspTNI GGTCTC 1 cut(s) 707
BsrBI CCGCTC 1 cut(s) 569
BsrFI RCCGGY 1 cut(s) 745
BssAI RCCGGY 1 cut(s) 745
BssECI CCNNGG 2 cut(s) 249, 825
BssMI GATC 3 cut(s) 36, 44, 1086
BssSI CACGAG 1 cut(s) 785
Bst2BI CACGAG 1 cut(s) 785
Bst2UI CCWGG 2 cut(s) 250, 826
Bst4CI ACNGT 4 cut(s) 375, 685, 936, 987
Bst6I CTCTTC 3 cut(s) 188, 281, 338
BstBAI YACGTR 1 cut(s) 837
BstC8I GCNNGC 4 cut(s) 349, 567, 747, 813
BstDEI CTNAG 2 cut(s) 149, 402
BstFNI CGCG 2 cut(s) 811, 965
BstHHI GCGC 1 cut(s) 678
BstKTI GATC 3 cut(s) 39, 47, 1089
BstMAI GTCTC 1 cut(s) 707
BstMBI GATC 3 cut(s) 36, 44, 1086
BstMCI CGRYCG 2 cut(s) 711, 750
BstMWI GCNNNNNNNGC 3 cut(s) 221, 592, 755
BstNI CCWGG 2 cut(s) 250, 826
BstNSI RCATGY 1 cut(s) 517
BstSCI CCNGG 2 cut(s) 248, 824
BstSLI GKGCMC 2 cut(s) 690, 739
BstUI CGCG 2 cut(s) 811, 965
BstV1I GCAGC 1 cut(s) 900
BstXI CCANNNNNNTGG 1 cut(s) 766
BstZI CGGCCG 2 cut(s) 708, 747
BsuI GTATCC 1 cut(s) 1000
BsuRI GGCC 6 cut(s) 294, 710, 737, 749, 959, 1084
BtrI CACGTC 1 cut(s) 535
BtsI GCAGTG 2 cut(s) 342, 740
BtsIMutI CAGTG 2 cut(s) 342, 740
Cac8I GCNNGC 4 cut(s) 349, 567, 747, 813
CfoI GCGC 1 cut(s) 678
Cfr10I RCCGGY 1 cut(s) 745
Cfr13I GGNCC 4 cut(s) 293, 735, 736, 1069
CseI GACGC 1 cut(s) 817
CviAII CATG 8 cut(s) 40, 238, 290, 514, 732, 805, 854, 1080
DdeI CTNAG 2 cut(s) 149, 402
DpnI GATC 3 cut(s) 38, 46, 1088
DpnII GATC 3 cut(s) 36, 44, 1086
EaeI YGGCCR 4 cut(s) 708, 747, 957, 1082
EagI CGGCCG 2 cut(s) 708, 747
Eam1104I CTCTTC 3 cut(s) 188, 281, 338
EarI CTCTTC 3 cut(s) 188, 281, 338
Ecl136II GAGCTC 2 cut(s) 586, 790
EclXI CGGCCG 2 cut(s) 708, 747
Eco24I GRGCYC 3 cut(s) 588, 739, 792
Eco31I GGTCTC 1 cut(s) 707
Eco47I GGWCC 1 cut(s) 1069
Eco52I CGGCCG 2 cut(s) 708, 747
Eco53kI GAGCTC 2 cut(s) 586, 790
EcoICRI GAGCTC 2 cut(s) 586, 790
EcoO109I RGGNCCY 1 cut(s) 736
EcoRI GAATTC 1 cut(s) 489
EcoRII CCWGG 2 cut(s) 248, 824
EcoT38I GRGCYC 3 cut(s) 588, 739, 792
FaeI CATG 8 cut(s) 43, 241, 293, 517, 735, 808, 857, 1083
FaqI GGGAC 2 cut(s) 739, 1082
FatI CATG 8 cut(s) 39, 237, 289, 513, 731, 804, 853, 1079
FauI CCCGC 1 cut(s) 229
Fnu4HI GCNGC 3 cut(s) 708, 911, 914
FriOI GRGCYC 3 cut(s) 588, 739, 792
Fsp4HI GCNGC 3 cut(s) 708, 911, 914
GlaI GCGC 1 cut(s) 677
GluI GCNGC 3 cut(s) 708, 911, 914
HaeIII GGCC 6 cut(s) 294, 710, 737, 749, 959, 1084
HapII CCGG 2 cut(s) 225, 746
HgaI GACGC 1 cut(s) 817
HhaI GCGC 1 cut(s) 678
Hin1II CATG 8 cut(s) 43, 241, 293, 517, 735, 808, 857, 1083
Hin6I GCGC 1 cut(s) 676
HinP1I GCGC 1 cut(s) 676
HincII GTYRAC 2 cut(s) 930, 939
HindII GTYRAC 2 cut(s) 930, 939
HinfI GANTC 3 cut(s) 579, 590, 817
HpaII CCGG 2 cut(s) 225, 746
HphI GGTGA 1 cut(s) 178
Hpy166II GTNNAC 4 cut(s) 532, 688, 930, 939
Hpy188I TCNGA 3 cut(s) 307, 414, 578
Hpy188III TCNNGA 2 cut(s) 64, 994
Hpy8I GTNNAC 4 cut(s) 532, 688, 930, 939
Hpy99I CGWCG 1 cut(s) 875
HpyAV CCTTC 3 cut(s) 727, 883, 897
HpyCH4III ACNGT 4 cut(s) 375, 685, 936, 987
HpyCH4IV ACGT 4 cut(s) 534, 671, 761, 836
HpyCH4V TGCA 7 cut(s) 481, 513, 688, 731, 784, 916, 1029
HpyF10VI GCNNNNNNNGC 3 cut(s) 221, 592, 755
HpyF3I CTNAG 2 cut(s) 149, 402
HpySE526I ACGT 4 cut(s) 534, 671, 761, 836
Hsp92II CATG 8 cut(s) 43, 241, 293, 517, 735, 808, 857, 1083
HspAI GCGC 1 cut(s) 676
KroI GCCGGC 1 cut(s) 745
KroNI GCCGGC 1 cut(s) 747
Kzo9I GATC 3 cut(s) 36, 44, 1086
LmnI GCTCC 2 cut(s) 159, 273
LpnPI CCDG 9 cut(s) 136, 235, 238, 262, 499, 692, 759, 811, 838
Lsp1109I GCAGC 1 cut(s) 900
LweI GCATC 2 cut(s) 552, 771
MaeII ACGT 4 cut(s) 534, 671, 761, 836
MaeIII GTNAC 1 cut(s) 832
MalI GATC 3 cut(s) 38, 46, 1088
MbiI CCGCTC 1 cut(s) 569
MboI GATC 3 cut(s) 36, 44, 1086
MboII GAAGA 7 cut(s) 68, 175, 268, 325, 331, 842, 898
MhlI GDGCHC 4 cut(s) 588, 690, 739, 792
MlsI TGGCCA 1 cut(s) 959
MluCI AATT 7 cut(s) 9, 385, 415, 489, 1034, 1043, 1073
MluI ACGCGT 1 cut(s) 809
MluNI TGGCCA 1 cut(s) 959
MlyI GAGTC 1 cut(s) 811
MmeI TCCRAC 1 cut(s) 624
Mox20I TGGCCA 1 cut(s) 959
MroNI GCCGGC 1 cut(s) 745
MscI TGGCCA 1 cut(s) 959
MseI TTAA 3 cut(s) 12, 71, 1105
Msp20I TGGCCA 1 cut(s) 959
MspA1I CMGCKG 1 cut(s) 707
MspI CCGG 2 cut(s) 225, 746
MspR9I CCNGG 2 cut(s) 250, 826
MvaI CCWGG 2 cut(s) 250, 826
MvnI CGCG 2 cut(s) 811, 965
MwoI GCNNNNNNNGC 3 cut(s) 221, 592, 755
NaeI GCCGGC 1 cut(s) 747
NdeII GATC 3 cut(s) 36, 44, 1086
NgoMIV GCCGGC 1 cut(s) 745
NlaIII CATG 8 cut(s) 43, 241, 293, 517, 735, 808, 857, 1083
NlaIV GGNNCC 5 cut(s) 155, 653, 737, 738, 1070
NmeAIII GCCGAG 1 cut(s) 736
NspI RCATGY 1 cut(s) 517
PcsI WCGNNNNNNNCGW 2 cut(s) 879, 999
PdiI GCCGGC 1 cut(s) 747
PfeI GAWTC 2 cut(s) 579, 590
PkrI GCNGC 3 cut(s) 709, 912, 915
PleI GAGTC 1 cut(s) 811
PpsI GAGTC 1 cut(s) 811
Ppu21I YACGTR 1 cut(s) 837
Psp124BI GAGCTC 2 cut(s) 588, 792
Psp6I CCWGG 2 cut(s) 248, 824
PspGI CCWGG 2 cut(s) 248, 824
PspN4I GGNNCC 5 cut(s) 155, 653, 737, 738, 1070
PspOMI GGGCCC 1 cut(s) 735
PspPI GGNCC 4 cut(s) 293, 735, 736, 1069
SacI GAGCTC 2 cut(s) 588, 792
SaqAI TTAA 3 cut(s) 12, 71, 1105
SatI GCNGC 3 cut(s) 708, 911, 914
Sau3AI GATC 3 cut(s) 36, 44, 1086
Sau96I GGNCC 4 cut(s) 293, 735, 736, 1069
SchI GAGTC 1 cut(s) 811
ScrFI CCNGG 2 cut(s) 250, 826
SduI GDGCHC 4 cut(s) 588, 690, 739, 792
SfaNI GCATC 2 cut(s) 552, 771
SinI GGWCC 1 cut(s) 1069
Sse9I AATT 7 cut(s) 9, 385, 415, 489, 1034, 1043, 1073
SsiI CCGC 7 cut(s) 213, 222, 569, 700, 707, 910, 963
SspI AATATT 1 cut(s) 476
SstI GAGCTC 2 cut(s) 588, 792
StyD4I CCNGG 2 cut(s) 248, 824
TaaI ACNGT 4 cut(s) 375, 685, 936, 987
TaiI ACGT 4 cut(s) 537, 674, 764, 839
TaqI TCGA 3 cut(s) 582, 588, 873
TasI AATT 7 cut(s) 9, 385, 415, 489, 1034, 1043, 1073
TauI GCSGC 2 cut(s) 710, 913
TfiI GAWTC 2 cut(s) 579, 590
Tru1I TTAA 3 cut(s) 12, 71, 1105
Tru9I TTAA 3 cut(s) 12, 71, 1105
TscAI CASTG 2 cut(s) 349, 747
TseI GCWGC 1 cut(s) 913
TspDTI ATGAA 7 cut(s) 17, 109, 232, 291, 325, 842, 1068
TspRI CASTG 2 cut(s) 349, 747
VneI GTGCAC 1 cut(s) 686
VpaK11BI GGWCC 1 cut(s) 1069
XapI RAATTY 4 cut(s) 385, 415, 489, 1043
XceI RCATGY 1 cut(s) 517
XcmI CCANNNNNNNNNTGG 1 cut(s) 949
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.