Rmu_sc0003662.1_g000016

long-chain-alcohol O-fatty-acyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003662.1
OG0017348
Physical Location & Seq
Forward (+)
83021 .. 84118
1098 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003662.1_g000016.1.cds

Sequence Viewer

Length: 1098 bp
atgaatggtgaaatcaagactattttcaagataggcctctcggtcctggcatctctaagctacacctatttcatatcttctaagatcccccaaggcaaactcagattcttctgcctccttcccatcttctacctattcttcatcctccctctatctctatctaccgctctccccgccggagttatttctttgttcgtcacctgggttggtaccttcaagctcctcctcttctccttcgggtcgggcccgctttcgtctcaacaaccaccaaagtctctcctccacttcatcttcattgcttgcctcccaatcaaaacccaaagctcaaaccagagaagccccgaaaagtcgtccccagtttcagggaaaccacccaaagtccctctgaattttccaaccaaagtcgtgcttttttctattttggtggctctgacagactacaaacattacttgcaccccaagcttttgttagtccaatatggctgcatgttgtactttttcgtggacataatcgtcggctcctgcaatgttctcatgcgagcggctcttgggatcgaactcgaatcaccgtcagatgagccatacctctcgacatcgctgcaagatttctggggccgtaggtggaacctcatgataacgaacattctgcgcgacaccatatacaaacccgtacggtcagccatggcggccttcgtagggagcgattgggcgccactacctgccatgttggccgtctttttagtgtcgggtctaatgcacgagctcatatattactacatgacccgcgtgactcccacgtgggaggtcacgctgttcttcattcttcatggagtgtgtttggtggtggaggtcggtatgaaaaaggttttagctccaaagtggcggtggcggtggcattgggctgtgtctgtcccgatgacactcggcttcgtggctgtcaccgccatttggctgttcttcccgccgttggtgaggaatggcgtggatgcaaaggcgatcgaagagtgcaaggaattattagaattcatatttgaaaagttaaaattggattgtttggtttcatgggcatctctttcctcgatcgggtcattaggataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MBOAT_2

Protein Analysis

365

Amino Acids

41.13

Weight (kDa)

9.29

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017348)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44520
malus_domestica MD03G1191400.v1.1
prunus_persica Prupe.4G227300_v2.0.a1
pyrus_communis pycom03g14440
rosa_chinensis RchiOBHm_Chr2g0161741
rosa_laevigata RLG00000021297
rosa_multiflora Rmu_sc0000865.1_g000003 Rmu_sc0003662.1_g000016
rosa_roxburghii Rroxscaffold_2G00088640
rosa_rugosa Rorug02G0491800
rosa_samantha Rh2CG541300 Rh2DG580100
rosa_wichuraiana Rw2G046140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 512
Acc36I ACCTGC 1 cut(s) 727
Acc65I GGTACC 1 cut(s) 209
AccB1I GGYRCC 2 cut(s) 209, 709
AccBSI CCGCTC 2 cut(s) 167, 542
AccII CGCG 2 cut(s) 651, 786
AclWI GGATC 2 cut(s) 79, 560
AcoI YGGCCR 1 cut(s) 729
AcsI RAATTY 2 cut(s) 388, 1022
AcvI CACGTG 1 cut(s) 798
AcyI GRCGYC 1 cut(s) 710
AfaI GTAC 3 cut(s) 211, 494, 672
AfiI CCNNNNNNNGG 5 cut(s) 362, 696, 948, 967, 1083
AgsI TTSAA 3 cut(s) 28, 217, 1034
AjnI CCWGG 2 cut(s) 45, 200
AluBI AGCT 6 cut(s) 60, 220, 324, 463, 763, 872
AluI AGCT 6 cut(s) 60, 220, 324, 463, 763, 872
Alw21I GWGCWC 1 cut(s) 765
Alw26I GTCTC 2 cut(s) 261, 279
AlwI GGATC 2 cut(s) 79, 560
AoxI GGCC 5 cut(s) 34, 244, 613, 687, 729
ApaI GGGCCC 1 cut(s) 248
ApeKI GCWGC 2 cut(s) 483, 598
ApoI RAATTY 2 cut(s) 388, 1022
Asp718I GGTACC 1 cut(s) 209
AspLEI GCGC 2 cut(s) 651, 712
AspS9I GGNCC 4 cut(s) 43, 244, 245, 613
AsuHPI GGTGA 5 cut(s) 20, 190, 558, 931, 982
AvaII GGWCC 1 cut(s) 43
BaeGI GKGCMC 1 cut(s) 248
BanI GGYRCC 2 cut(s) 209, 709
BanII GRGCYC 2 cut(s) 248, 765
BauI CACGAG 1 cut(s) 758
BbrPI CACGTG 1 cut(s) 798
Bbv12I GWGCWC 1 cut(s) 765
BbvI GCAGC 2 cut(s) 470, 585
BccI CCATC 1 cut(s) 131
BceAI ACGGC 3 cut(s) 600, 716, 949
BcgI CGANNNNNNTGC 4 cut(s) 580, 614, 628, 662
BciT130I CCWGG 2 cut(s) 47, 202
BcoDI GTCTC 2 cut(s) 261, 279
BfoI RGCGCY 1 cut(s) 713
BfuAI ACCTGC 1 cut(s) 727
BglI GCCNNNNNGGC 2 cut(s) 686, 728
BisI GCNGC 4 cut(s) 484, 543, 599, 687
BlsI GCNGC 4 cut(s) 485, 544, 600, 688
Bme1390I CCNGG 2 cut(s) 47, 202
Bme18I GGWCC 1 cut(s) 43
BmgT120I GGNCC 4 cut(s) 43, 244, 245, 613
BmiI GGNNCC 6 cut(s) 211, 246, 520, 614, 626, 711
BmrFI CCNGG 2 cut(s) 47, 202
BmrI ACTGGG 1 cut(s) 350
BmsI GCATC 3 cut(s) 59, 976, 1076
BmuI ACTGGG 1 cut(s) 350
BsaAI YACGTR 1 cut(s) 798
BsaHI GRCGYC 1 cut(s) 710
BsaJI CCNNGG 3 cut(s) 91, 201, 681
Bsc4I CCNNNNNNNGG 5 cut(s) 362, 696, 948, 967, 1083
Bse1I ACTGG 1 cut(s) 356
Bse3DI GCAATG 2 cut(s) 294, 532
BseBI CCWGG 2 cut(s) 47, 202
BseDI CCNNGG 3 cut(s) 91, 201, 681
BseGI GGATG 2 cut(s) 141, 991
BseLI CCNNNNNNNGG 5 cut(s) 362, 696, 948, 967, 1083
BseMI GCAATG 2 cut(s) 294, 532
BseMII CTCAG 1 cut(s) 115
BseNI ACTGG 1 cut(s) 356
BseRI GAGGAG 3 cut(s) 212, 215, 269
BseSI GKGCMC 1 cut(s) 248
BseXI GCAGC 2 cut(s) 470, 585
Bsh1236I CGCG 2 cut(s) 651, 786
Bsh1285I CGRYCG 2 cut(s) 999, 1083
BshFI GGCC 5 cut(s) 36, 246, 615, 689, 731
BshNI GGYRCC 2 cut(s) 209, 709
BsiEI CGRYCG 2 cut(s) 999, 1083
BsiHKAI GWGCWC 1 cut(s) 765
BsiSI CCGG 1 cut(s) 177
BsiWI CGTACG 1 cut(s) 670
BslFI GGGAC 3 cut(s) 337, 365, 896
BslI CCNNNNNNNGG 5 cut(s) 362, 696, 948, 967, 1083
BsmAI GTCTC 2 cut(s) 261, 279
BsmBI CGTCTC 1 cut(s) 261
BsmFI GGGAC 3 cut(s) 337, 365, 896
BsnI GGCC 5 cut(s) 36, 246, 615, 689, 731
Bsp120I GGGCCC 1 cut(s) 244
Bsp1286I GDGCHC 2 cut(s) 248, 765
Bsp143I GATC 4 cut(s) 84, 552, 996, 1080
Bsp19I CCATGG 1 cut(s) 681
BspANI GGCC 5 cut(s) 36, 246, 615, 689, 731
BspCNI CTCAG 1 cut(s) 114
BspFNI CGCG 2 cut(s) 651, 786
BspHI TCATGA 1 cut(s) 630
BspLI GGNNCC 6 cut(s) 211, 246, 520, 614, 626, 711
BspMI ACCTGC 1 cut(s) 727
BspPI GGATC 2 cut(s) 79, 560
BspT107I GGYRCC 2 cut(s) 209, 709
BsrBI CCGCTC 2 cut(s) 167, 542
BsrDI GCAATG 2 cut(s) 294, 532
BsrI ACTGG 1 cut(s) 356
BssECI CCNNGG 3 cut(s) 91, 201, 681
BssMI GATC 4 cut(s) 84, 552, 996, 1080
BssNI GRCGYC 1 cut(s) 710
BssSI CACGAG 1 cut(s) 758
BssT1I CCWWGG 2 cut(s) 91, 681
Bst2BI CACGAG 1 cut(s) 758
Bst2UI CCWGG 2 cut(s) 47, 202
Bst4CI ACNGT 2 cut(s) 570, 675
Bst6I CTCTTC 2 cut(s) 233, 996
BstACI GRCGYC 1 cut(s) 710
BstBAI YACGTR 1 cut(s) 798
BstC8I GCNNGC 3 cut(s) 248, 301, 540
BstDEI CTNAG 3 cut(s) 56, 81, 101
BstDSI CCRYGG 1 cut(s) 681
BstF5I GGATG 2 cut(s) 141, 991
BstFNI CGCG 2 cut(s) 651, 786
BstH2I RGCGCY 1 cut(s) 713
BstHHI GCGC 2 cut(s) 651, 712
BstKTI GATC 4 cut(s) 87, 555, 999, 1083
BstMAI GTCTC 2 cut(s) 261, 279
BstMBI GATC 4 cut(s) 84, 552, 996, 1080
BstMCI CGRYCG 2 cut(s) 999, 1083
BstMWI GCNNNNNNNGC 5 cut(s) 173, 460, 686, 728, 941
BstNI CCWGG 2 cut(s) 47, 202
BstNSI RCATGY 1 cut(s) 490
BstSCI CCNGG 2 cut(s) 45, 200
BstSLI GKGCMC 1 cut(s) 248
BstUI CGCG 2 cut(s) 651, 786
BstV1I GCAGC 2 cut(s) 470, 585
BstX2I RGATCY 1 cut(s) 84
BstYI RGATCY 1 cut(s) 84
BsuRI GGCC 5 cut(s) 36, 246, 615, 689, 731
BtgI CCRYGG 1 cut(s) 681
BtgZI GCGATG 1 cut(s) 579
BtsCI GGATG 2 cut(s) 141, 991
BveI ACCTGC 1 cut(s) 727
Cac8I GCNNGC 3 cut(s) 248, 301, 540
CciI TCATGA 1 cut(s) 630
CfoI GCGC 2 cut(s) 651, 712
Cfr13I GGNCC 4 cut(s) 43, 244, 245, 613
Csp6I GTAC 3 cut(s) 210, 493, 671
CviAII CATG 8 cut(s) 487, 535, 631, 682, 724, 778, 827, 1062
CviQI GTAC 3 cut(s) 210, 493, 671
DdeI CTNAG 3 cut(s) 56, 81, 101
DinI GGCGCC 1 cut(s) 711
DpnI GATC 4 cut(s) 86, 554, 998, 1082
DpnII GATC 4 cut(s) 84, 552, 996, 1080
DrdI GACNNNNNNGTC 1 cut(s) 512
DseDI GACNNNNNNGTC 1 cut(s) 512
EaeI YGGCCR 1 cut(s) 729
Eam1104I CTCTTC 2 cut(s) 233, 996
EarI CTCTTC 2 cut(s) 233, 996
Ecl136II GAGCTC 1 cut(s) 763
Eco130I CCWWGG 2 cut(s) 91, 681
Eco147I AGGCCT 1 cut(s) 36
Eco24I GRGCYC 2 cut(s) 248, 765
Eco47I GGWCC 1 cut(s) 43
Eco53kI GAGCTC 1 cut(s) 763
Eco72I CACGTG 1 cut(s) 798
EcoICRI GAGCTC 1 cut(s) 763
EcoRI GAATTC 1 cut(s) 1022
EcoRII CCWGG 2 cut(s) 45, 200
EcoT14I CCWWGG 2 cut(s) 91, 681
EcoT38I GRGCYC 2 cut(s) 248, 765
EgeI GGCGCC 1 cut(s) 711
EheI GGCGCC 1 cut(s) 711
ErhI CCWWGG 2 cut(s) 91, 681
Esp3I CGTCTC 1 cut(s) 261
FaeI CATG 8 cut(s) 490, 538, 634, 685, 727, 781, 830, 1065
FalI AAGNNNNNCTT 2 cut(s) 393, 425
FaqI GGGAC 3 cut(s) 337, 365, 896
FatI CATG 8 cut(s) 486, 534, 630, 681, 723, 777, 826, 1061
FauI CCCGC 4 cut(s) 181, 255, 791, 969
Fnu4HI GCNGC 4 cut(s) 484, 543, 599, 687
FokI GGATG 2 cut(s) 128, 998
FriOI GRGCYC 2 cut(s) 248, 765
Fsp4HI GCNGC 4 cut(s) 484, 543, 599, 687
GlaI GCGC 2 cut(s) 650, 711
GluI GCNGC 4 cut(s) 484, 543, 599, 687
HaeII RGCGCY 1 cut(s) 713
HaeIII GGCC 5 cut(s) 36, 246, 615, 689, 731
HapII CCGG 1 cut(s) 177
HhaI GCGC 2 cut(s) 651, 712
Hin1I GRCGYC 1 cut(s) 710
Hin1II CATG 8 cut(s) 490, 538, 634, 685, 727, 781, 830, 1065
Hin6I GCGC 2 cut(s) 649, 710
HinP1I GCGC 2 cut(s) 649, 710
HindIII AAGCTT 1 cut(s) 461
HinfI GANTC 3 cut(s) 105, 563, 790
HpaII CCGG 1 cut(s) 177
HphI GGTGA 5 cut(s) 20, 190, 558, 931, 982
Hpy166II GTNNAC 1 cut(s) 505
Hpy188I TCNGA 4 cut(s) 104, 387, 432, 574
Hpy188III TCNNGA 5 cut(s) 16, 28, 589, 631, 913
Hpy8I GTNNAC 1 cut(s) 505
Hpy99I CGWCG 1 cut(s) 518
HpyAV CCTTC 4 cut(s) 128, 223, 244, 700
HpyCH4III ACNGT 2 cut(s) 570, 675
HpyCH4IV ACGT 1 cut(s) 797
HpyCH4V TGCA 7 cut(s) 454, 486, 525, 601, 757, 989, 1008
HpyF10VI GCNNNNNNNGC 5 cut(s) 173, 460, 686, 728, 941
HpyF3I CTNAG 3 cut(s) 56, 81, 101
HpySE526I ACGT 1 cut(s) 797
Hsp92I GRCGYC 1 cut(s) 710
Hsp92II CATG 8 cut(s) 490, 538, 634, 685, 727, 781, 830, 1065
HspAI GCGC 2 cut(s) 649, 710
KasI GGCGCC 1 cut(s) 709
KpnI GGTACC 1 cut(s) 213
Kzo9I GATC 4 cut(s) 84, 552, 996, 1080
LmnI GCTCC 4 cut(s) 225, 524, 699, 877
Lsp1109I GCAGC 2 cut(s) 470, 585
LweI GCATC 3 cut(s) 59, 976, 1076
MaeII ACGT 1 cut(s) 797
MaeIII GTNAC 4 cut(s) 196, 787, 805, 937
MalI GATC 4 cut(s) 86, 554, 998, 1082
MbiI CCGCTC 2 cut(s) 167, 542
MboI GATC 4 cut(s) 84, 552, 996, 1080
MflI RGATCY 1 cut(s) 84
MhlI GDGCHC 2 cut(s) 248, 765
MluCI AATT 4 cut(s) 388, 1013, 1022, 1043
Mly113I GGCGCC 1 cut(s) 710
MlyI GAGTC 1 cut(s) 784
MmeI TCCRAC 1 cut(s) 419
MseI TTAA 1 cut(s) 1040
MspI CCGG 1 cut(s) 177
MspR9I CCNGG 2 cut(s) 47, 202
MvaI CCWGG 2 cut(s) 47, 202
MvnI CGCG 2 cut(s) 651, 786
MwoI GCNNNNNNNGC 5 cut(s) 173, 460, 686, 728, 941
NarI GGCGCC 1 cut(s) 710
NcoI CCATGG 1 cut(s) 681
NdeII GATC 4 cut(s) 84, 552, 996, 1080
NlaIII CATG 8 cut(s) 490, 538, 634, 685, 727, 781, 830, 1065
NlaIV GGNNCC 6 cut(s) 211, 246, 520, 614, 626, 711
NmeAIII GCCGAG 1 cut(s) 903
NmuCI GTSAC 4 cut(s) 196, 787, 805, 937
NspI RCATGY 1 cut(s) 490
PagI TCATGA 1 cut(s) 630
PceI AGGCCT 1 cut(s) 36
PcsI WCGNNNNNNNCGW 1 cut(s) 699
PfeI GAWTC 2 cut(s) 105, 563
Pfl23II CGTACG 1 cut(s) 670
PkrI GCNGC 4 cut(s) 485, 544, 600, 688
Ple19I CGATCG 2 cut(s) 999, 1083
PleI GAGTC 1 cut(s) 784
PluTI GGCGCC 1 cut(s) 713
PmaCI CACGTG 1 cut(s) 798
PmlI CACGTG 1 cut(s) 798
PpsI GAGTC 1 cut(s) 784
Ppu21I YACGTR 1 cut(s) 798
Psp124BI GAGCTC 1 cut(s) 765
Psp6I CCWGG 2 cut(s) 45, 200
PspCI CACGTG 1 cut(s) 798
PspGI CCWGG 2 cut(s) 45, 200
PspLI CGTACG 1 cut(s) 670
PspN4I GGNNCC 6 cut(s) 211, 246, 520, 614, 626, 711
PspOMI GGGCCC 1 cut(s) 244
PspPI GGNCC 4 cut(s) 43, 244, 245, 613
PsuI RGATCY 1 cut(s) 84
PvuI CGATCG 2 cut(s) 999, 1083
RsaI GTAC 3 cut(s) 211, 494, 672
RsaNI GTAC 3 cut(s) 210, 493, 671
SacI GAGCTC 1 cut(s) 765
SaqAI TTAA 1 cut(s) 1040
SatI GCNGC 4 cut(s) 484, 543, 599, 687
Sau3AI GATC 4 cut(s) 84, 552, 996, 1080
Sau96I GGNCC 4 cut(s) 43, 244, 245, 613
SchI GAGTC 1 cut(s) 784
ScrFI CCNGG 2 cut(s) 47, 202
SduI GDGCHC 2 cut(s) 248, 765
SfaNI GCATC 3 cut(s) 59, 976, 1076
SfoI GGCGCC 1 cut(s) 711
SinI GGWCC 1 cut(s) 43
Sse9I AATT 4 cut(s) 388, 1013, 1022, 1043
SseBI AGGCCT 1 cut(s) 36
SspDI GGCGCC 1 cut(s) 709
SstI GAGCTC 1 cut(s) 765
StuI AGGCCT 1 cut(s) 36
StyD4I CCNGG 2 cut(s) 45, 200
StyI CCWWGG 2 cut(s) 91, 681
TaaI ACNGT 2 cut(s) 570, 675
TaiI ACGT 1 cut(s) 800
TaqI TCGA 5 cut(s) 555, 561, 590, 999, 1079
TaqII GACCGA 1 cut(s) 31
TasI AATT 4 cut(s) 388, 1013, 1022, 1043
TatI WGTACW 1 cut(s) 492
TauI GCSGC 2 cut(s) 545, 689
TfiI GAWTC 2 cut(s) 105, 563
Tru1I TTAA 1 cut(s) 1040
Tru9I TTAA 1 cut(s) 1040
TseFI GTSAC 4 cut(s) 196, 787, 805, 937
TseI GCWGC 2 cut(s) 483, 598
Tsp45I GTSAC 4 cut(s) 196, 787, 805, 937
VpaK11BI GGWCC 1 cut(s) 43
XapI RAATTY 2 cut(s) 388, 1022
XceI RCATGY 1 cut(s) 490
XcmI CCANNNNNNNNNTGG 1 cut(s) 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.