pycom03g22200

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0009284
Physical Location & Seq
Reverse (-)
22380444 .. 22384529
4086 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1689 bp
ATGAACCAAAAGAAAGAGAGAGAAAATGTGAAGCCAAAAAGGCCGATAGCAGCAGACAGTACGAATACGTTCTCTTTAAGACGGGAAATAAGAGAGGCAGCAATAAAGCTTCGCCATCACTGTGAAGCAACCGTCTCCGTTCCTCTCTCTCTCTCTCTCTCCTCTTTCTCTCACACTCTCTTCCGCTCGATCGAGCTTCTCCGATCCTTCAAGGCCTCTCTAGAAGGGTGGTGGGAATCCTGTACAGCTCTCCCTTTCCCCCTTACTCTGCTCATCATAGTTGCTGCAGGTGTACAGCAAACCCAACACGCCGCCGTTTTTGTGATGGAGTTGTACGGACGAAGCCCCGCCAGAAACGGGTCGAACCAGGAATGGAGCCCCGCAGCCGGAGAGACCGGCCTCGAAGAGCAAATGTGGCAATTGGGGCTGACGAGCAGCGAATCGTACCCGGAGAGACCCGGCGTGCCCAACTGTGTCTACTACATGCGAACCGGGTTCTGTGGATACGGTGGTCGGTGCCGGTACAGCCATCCTCGAGATCGTGCTGCGGTTGTGGCAACTGTAAGAGCTACAGGGGATTACCCAGAGAGAGTTGGGGAACCTGTATGTCAGTATTATTTAAAGACTGGGACCTGTAAATTTGGTGCGTCCTGCAAGTTCCACCATCCAAAACATGGAACTGGATCCTTAAACCGAGCTCCCCTAAATATTTATGGATACCCATTACGACCGGGCGAGAATGAATGCTCCTACTATTTGAAAACGGGGCAATGCAAATTTGGCATAACCTGTAAATTCCATCATCCACACCCTGCTGGAACAACAATACCGGCTTCTGCACCCCAATTTTATCCGTCGGTGCAGTCTCCTGTTCCTTTGGCAGAACAGTATGGGGGGGCATCCACCAGTTTGAGGGTGGCTAGGCCTCCACTATTAACTGGATCATATGTGCAAGGGACTTACGGTCCTGTCTTGATTCCTCCTGGAGTTGTTCCGATTCAGGGTTGGAGTCCGTATTCGGCACCTCTTAGTCCTGTACCATCTCCTGGAGCTCAACCCACAGTTGGAGCAACTTCTTTATACGGAGTAACACAGCTATCTTCTCCAACACACGGACTTGCAAGCCCTTATACCTCCATACCCTCTTCTGTTGGTCCTTCTAGCAGCAACCCGAGTGAACAAGTTTTCCCAGAGAGGCCTGGCGAACTTGAATGCCAGTACTATCTGAAAACTGGGGACTGTAAATATGGACCATCTTGTAGCATCAACCAACAGGGGCTCAGTAGGGTGGCTGAGGCACATGGGTTTGTCCTGTGCGGTCTCAGGTTTGAAACCCAAAGATTCTACCTGCAAAATGGTCAGTGCAAGTTTGGATCTACATGCAAATTTGACCATCCAATGCAGACCATGAGGTACAACCTCTCAGCTTCATCTCTCGTTGATATGCCTGTTGTTCAATATCCGGTTGGGTCTCTGCTGGCCACCCTGGCTCCATCATCCTCATCATCGAATCTCCGGCCCGATTTACTTTCTTCTTCCGGGAACACCTCAAGTAGTTCTGGTGGATTGATTTTTTCACAGAGCGGTTCTGTTTCACTATCTGATGTGCAACTGTCCAGTCAGACTTCATCTCCTTTAAGCAATAGCAGAAGGGCGAGACCAGGTGGCGAGTTTCGTCGATCGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

563

Amino Acids

60.83

Weight (kDa)

9.08

Isoelectric Point (pI)

54.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 154 - 179 6.9e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 200 - 224 2.1e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 245 - 269 1.6e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 447 - 467 7.6e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 278
Acc36I ACCTGC 2 cut(s) 278, 1356
AccB1I GGYRCC 2 cut(s) 516, 1021
AccB7I CCANNNNNTGG 2 cut(s) 674, 1046
AccBSI CCGCTC 2 cut(s) 186, 1584
AccI GTMKAC 1 cut(s) 477
AciI CCGC 7 cut(s) 184, 312, 348, 381, 548, 1317, 1584
AclWI GGATC 5 cut(s) 198, 678, 691, 949, 1381
AcoI YGGCCR 1 cut(s) 1479
AcsI RAATTY 4 cut(s) 638, 776, 794, 1385
AfaI GTAC 9 cut(s) 61, 244, 294, 335, 446, 524, 1038, 1220, 1415
AfiI CCNNNNNNNGG 8 cut(s) 357, 386, 674, 912, 1001, 1046, 1064, 1112
AgsI TTSAA 5 cut(s) 211, 760, 1211, 1331, 1457
AhdI GACNNNNNGTC 1 cut(s) 963
AjnI CCWGG 6 cut(s) 366, 982, 1045, 1198, 1485, 1660
AloI GAACNNNNNNTCC 2 cut(s) 1170, 1202
AluBI AGCT 8 cut(s) 109, 196, 248, 569, 698, 1052, 1096, 1427
AluI AGCT 8 cut(s) 109, 196, 248, 569, 698, 1052, 1096, 1427
Alw21I GWGCWC 2 cut(s) 700, 1054
Alw26I GTCTC 7 cut(s) 139, 386, 448, 870, 1325, 1476, 1651
AlwI GGATC 5 cut(s) 198, 678, 691, 949, 1381
Ama87I CYCGRG 2 cut(s) 534, 1171
AoxI GGCC 7 cut(s) 41, 213, 397, 923, 1196, 1479, 1517
ApeKI GCWGC 7 cut(s) 50, 98, 284, 383, 435, 545, 1164
ApoI RAATTY 4 cut(s) 638, 776, 794, 1385
Asp700I GAANNNNTTC 1 cut(s) 68
AspS9I GGNCC 5 cut(s) 630, 965, 1154, 1250, 1518
AsuC2I CCSGG 5 cut(s) 449, 459, 493, 732, 1540
AvaI CYCGRG 2 cut(s) 534, 1171
AvaII GGWCC 4 cut(s) 630, 965, 1154, 1250
BaeGI GKGCMC 1 cut(s) 468
BaeI ACNNNNGTAYC 2 cut(s) 496, 529
BalI TGGCCA 1 cut(s) 1481
BamHI GGATCC 1 cut(s) 683
BanI GGYRCC 2 cut(s) 516, 1021
BanII GRGCYC 4 cut(s) 380, 700, 1054, 1281
Bbv12I GWGCWC 2 cut(s) 700, 1054
BbvCI CCTCAGC 1 cut(s) 1293
BbvI GCAGC 7 cut(s) 62, 110, 271, 395, 447, 532, 1176
BccI CCATC 9 cut(s) 123, 319, 537, 672, 807, 1048, 1261, 1401, 1501
BceAI ACGGC 1 cut(s) 299
BciT130I CCWGG 6 cut(s) 368, 984, 1047, 1200, 1487, 1662
BciVI GTATCC 2 cut(s) 497, 710
BcnI CCSGG 5 cut(s) 449, 459, 493, 732, 1540
BcoDI GTCTC 7 cut(s) 139, 386, 448, 870, 1325, 1476, 1651
BfaI CTAG 3 cut(s) 221, 921, 1161
BfmI CTRYAG 2 cut(s) 285, 570
BfuAI ACCTGC 2 cut(s) 278, 1356
BfuI GTATCC 2 cut(s) 497, 710
BglI GCCNNNNNGGC 2 cut(s) 40, 1487
BisI GCNGC 8 cut(s) 51, 99, 285, 312, 384, 436, 546, 1165
BlsI GCNGC 8 cut(s) 52, 100, 286, 313, 385, 437, 547, 1166
BmcAI AGTACT 1 cut(s) 1220
Bme18I GGWCC 4 cut(s) 630, 965, 1154, 1250
BmeRI GACNNNNNGTC 1 cut(s) 963
BmeT110I CYCGRG 2 cut(s) 534, 1171
BmgT120I GGNCC 5 cut(s) 630, 965, 1154, 1250, 1518
BmiI GGNNCC 7 cut(s) 377, 518, 600, 631, 685, 1023, 1491
BmrI ACTGGG 2 cut(s) 636, 1242
BmsI GCATC 2 cut(s) 908, 1272
BmuI ACTGGG 2 cut(s) 636, 1242
BpmI CTGGAG 2 cut(s) 1005, 1068
Bpu10I CCTNAGC 1 cut(s) 1293
BpuEI CTTGAG 1 cut(s) 1534
BpuMI CCSGG 5 cut(s) 449, 459, 493, 732, 1540
Bsa29I ATCGAT 1 cut(s) 1682
BsaI GGTCTC 5 cut(s) 386, 448, 1325, 1476, 1651
BsaJI CCNNGG 1 cut(s) 1485
BsaWI WCCGGW 1 cut(s) 1462
BsaXI ACNNNNNCTCC 4 cut(s) 1474, 1504, 1615, 1645
Bsc4I CCNNNNNNNGG 8 cut(s) 357, 386, 674, 912, 1001, 1046, 1064, 1112
Bse118I RCCGGY 3 cut(s) 395, 519, 829
Bse1I ACTGG 7 cut(s) 631, 685, 906, 943, 1216, 1237, 1617
Bse3DI GCAATG 1 cut(s) 776
BseBI CCWGG 6 cut(s) 368, 984, 1047, 1200, 1487, 1662
BseCI ATCGAT 1 cut(s) 1682
BseDI CCNNGG 1 cut(s) 1485
BseGI GGATG 6 cut(s) 529, 664, 802, 899, 1393, 1496
BseLI CCNNNNNNNGG 8 cut(s) 357, 386, 674, 912, 1001, 1046, 1064, 1112
BseMI GCAATG 1 cut(s) 776
BseMII CTCAG 4 cut(s) 1284, 1294, 1336, 1437
BseNI ACTGG 7 cut(s) 631, 685, 906, 943, 1216, 1237, 1617
BseRI GAGGAG 1 cut(s) 151
BseSI GKGCMC 1 cut(s) 468
BseXI GCAGC 7 cut(s) 62, 110, 271, 395, 447, 532, 1176
BsgI GTGCAG 2 cut(s) 822, 881
Bsh1285I CGRYCG 3 cut(s) 192, 731, 1682
BshFI GGCC 7 cut(s) 43, 215, 399, 925, 1198, 1481, 1519
BshNI GGYRCC 2 cut(s) 516, 1021
BshVI ATCGAT 1 cut(s) 1682
BsiEI CGRYCG 3 cut(s) 192, 731, 1682
BsiHKAI GWGCWC 2 cut(s) 700, 1054
BsiHKCI CYCGRG 2 cut(s) 534, 1171
BslFI GGGAC 3 cut(s) 643, 970, 1250
BslI CCNNNNNNNGG 8 cut(s) 357, 386, 674, 912, 1001, 1046, 1064, 1112
BsmAI GTCTC 7 cut(s) 139, 386, 448, 870, 1325, 1476, 1651
BsmBI CGTCTC 1 cut(s) 139
BsmFI GGGAC 3 cut(s) 643, 970, 1250
BsmI GAATGC 2 cut(s) 749, 1217
BsnI GGCC 7 cut(s) 43, 215, 399, 925, 1198, 1481, 1519
Bso31I GGTCTC 5 cut(s) 386, 448, 1325, 1476, 1651
BsoBI CYCGRG 2 cut(s) 534, 1171
Bsp1286I GDGCHC 5 cut(s) 380, 468, 700, 1054, 1281
Bsp1407I TGTACA 2 cut(s) 242, 292
Bsp143I GATC 7 cut(s) 189, 203, 538, 683, 941, 1373, 1679
BspACI CCGC 7 cut(s) 184, 312, 348, 381, 548, 1317, 1584
BspANI GGCC 7 cut(s) 43, 215, 399, 925, 1198, 1481, 1519
BspCNI CTCAG 4 cut(s) 1285, 1293, 1335, 1436
BspDI ATCGAT 1 cut(s) 1682
BspLI GGNNCC 7 cut(s) 377, 518, 600, 631, 685, 1023, 1491
BspMAI CTGCAG 1 cut(s) 289
BspMI ACCTGC 2 cut(s) 278, 1356
BspPI GGATC 5 cut(s) 198, 678, 691, 949, 1381
BspQI GCTCTTC 1 cut(s) 399
BspT107I GGYRCC 2 cut(s) 516, 1021
BspTNI GGTCTC 5 cut(s) 386, 448, 1325, 1476, 1651
BsrBI CCGCTC 2 cut(s) 186, 1584
BsrDI GCAATG 1 cut(s) 776
BsrFI RCCGGY 3 cut(s) 395, 519, 829
BsrGI TGTACA 2 cut(s) 242, 292
BsrI ACTGG 7 cut(s) 631, 685, 906, 943, 1216, 1237, 1617
BssAI RCCGGY 3 cut(s) 395, 519, 829
BssECI CCNNGG 1 cut(s) 1485
BssMI GATC 7 cut(s) 189, 203, 538, 683, 941, 1373, 1679
Bst2UI CCWGG 6 cut(s) 368, 984, 1047, 1200, 1487, 1662
Bst6I CTCTTC 3 cut(s) 185, 399, 1150
BstAUI TGTACA 2 cut(s) 242, 292
BstC8I GCNNGC 3 cut(s) 464, 1123, 1479
BstDEI CTNAG 5 cut(s) 1028, 1280, 1293, 1322, 1423
BstF5I GGATG 6 cut(s) 529, 664, 802, 899, 1393, 1496
BstKTI GATC 7 cut(s) 192, 206, 541, 686, 944, 1376, 1682
BstMAI GTCTC 7 cut(s) 139, 386, 448, 870, 1325, 1476, 1651
BstMBI GATC 7 cut(s) 189, 203, 538, 683, 941, 1373, 1679
BstMCI CGRYCG 3 cut(s) 192, 731, 1682
BstMWI GCNNNNNNNGC 7 cut(s) 40, 415, 424, 525, 554, 780, 1487
BstNI CCWGG 6 cut(s) 368, 984, 1047, 1200, 1487, 1662
BstNSI RCATGY 2 cut(s) 487, 1383
BstSFI CTRYAG 2 cut(s) 285, 570
BstSLI GKGCMC 1 cut(s) 468
BstV1I GCAGC 7 cut(s) 62, 110, 271, 395, 447, 532, 1176
BstX2I RGATCY 2 cut(s) 683, 1373
BstYI RGATCY 2 cut(s) 683, 1373
Bsu15I ATCGAT 1 cut(s) 1682
BsuI GTATCC 2 cut(s) 497, 710
BsuRI GGCC 7 cut(s) 43, 215, 399, 925, 1198, 1481, 1519
BsuTUI ATCGAT 1 cut(s) 1682
BtsCI GGATG 6 cut(s) 529, 664, 802, 899, 1393, 1496
BtsIMutI CAGTG 2 cut(s) 118, 1367
BveI ACCTGC 2 cut(s) 278, 1356
Cac8I GCNNGC 3 cut(s) 464, 1123, 1479
Cfr10I RCCGGY 3 cut(s) 395, 519, 829
Cfr13I GGNCC 5 cut(s) 630, 965, 1154, 1250, 1518
ClaI ATCGAT 1 cut(s) 1682
CseI GACGC 1 cut(s) 636
CsiI ACCWGGT 1 cut(s) 1660
Csp6I GTAC 9 cut(s) 60, 243, 293, 334, 445, 523, 1037, 1219, 1414
CviAII CATG 5 cut(s) 484, 674, 1301, 1380, 1408
CviQI GTAC 9 cut(s) 60, 243, 293, 334, 445, 523, 1037, 1219, 1414
DdeI CTNAG 5 cut(s) 1028, 1280, 1293, 1322, 1423
DpnI GATC 7 cut(s) 191, 205, 540, 685, 943, 1375, 1681
DpnII GATC 7 cut(s) 189, 203, 538, 683, 941, 1373, 1679
DraI TTTAAA 1 cut(s) 621
DriI GACNNNNNGTC 1 cut(s) 963
EaeI YGGCCR 1 cut(s) 1479
Eam1104I CTCTTC 3 cut(s) 185, 399, 1150
Eam1105I GACNNNNNGTC 1 cut(s) 963
EarI CTCTTC 3 cut(s) 185, 399, 1150
Ecl136II GAGCTC 2 cut(s) 698, 1052
Eco147I AGGCCT 3 cut(s) 215, 925, 1198
Eco24I GRGCYC 4 cut(s) 380, 700, 1054, 1281
Eco31I GGTCTC 5 cut(s) 386, 448, 1325, 1476, 1651
Eco47I GGWCC 4 cut(s) 630, 965, 1154, 1250
Eco53kI GAGCTC 2 cut(s) 698, 1052
Eco88I CYCGRG 2 cut(s) 534, 1171
EcoICRI GAGCTC 2 cut(s) 698, 1052
EcoO109I RGGNCCY 1 cut(s) 630
EcoRII CCWGG 6 cut(s) 366, 982, 1045, 1198, 1485, 1660
EcoT38I GRGCYC 4 cut(s) 380, 700, 1054, 1281
Esp3I CGTCTC 1 cut(s) 139
FaeI CATG 5 cut(s) 487, 677, 1304, 1383, 1411
FaqI GGGAC 3 cut(s) 643, 970, 1250
FatI CATG 5 cut(s) 483, 673, 1300, 1379, 1407
FauI CCCGC 2 cut(s) 355, 388
FauNDI CATATG 1 cut(s) 946
FblI GTMKAC 1 cut(s) 477
Fnu4HI GCNGC 8 cut(s) 51, 99, 285, 312, 384, 436, 546, 1165
FokI GGATG 6 cut(s) 516, 651, 789, 886, 1380, 1483
FriOI GRGCYC 4 cut(s) 380, 700, 1054, 1281
Fsp4HI GCNGC 8 cut(s) 51, 99, 285, 312, 384, 436, 546, 1165
FspBI CTAG 3 cut(s) 221, 921, 1161
GluI GCNGC 8 cut(s) 51, 99, 285, 312, 384, 436, 546, 1165
GsuI CTGGAG 2 cut(s) 1005, 1068
HaeIII GGCC 7 cut(s) 43, 215, 399, 925, 1198, 1481, 1519
HgaI GACGC 1 cut(s) 636
Hin1II CATG 5 cut(s) 487, 677, 1304, 1383, 1411
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 7 cut(s) 236, 440, 976, 997, 1009, 1341, 1510
Hpy166II GTNNAC 3 cut(s) 293, 478, 1178
Hpy188I TCNGA 5 cut(s) 203, 996, 1227, 1603, 1623
Hpy188III TCNNGA 3 cut(s) 221, 536, 973
Hpy8I GTNNAC 3 cut(s) 293, 478, 1178
Hpy99I CGWCG 2 cut(s) 859, 1680
HpyAV CCTTC 4 cut(s) 217, 218, 1167, 1644
HpyCH4IV ACGT 1 cut(s) 68
HpyF10VI GCNNNNNNNGC 7 cut(s) 40, 415, 424, 525, 554, 780, 1487
HpyF3I CTNAG 5 cut(s) 1028, 1280, 1293, 1322, 1423
HpySE526I ACGT 1 cut(s) 68
Hsp92II CATG 5 cut(s) 487, 677, 1304, 1383, 1411
Kzo9I GATC 7 cut(s) 189, 203, 538, 683, 941, 1373, 1679
LguI GCTCTTC 1 cut(s) 399
LmnI GCTCC 6 cut(s) 375, 703, 752, 1049, 1067, 1495
Lsp1109I GCAGC 7 cut(s) 62, 110, 271, 395, 447, 532, 1176
LweI GCATC 2 cut(s) 908, 1272
MabI ACCWGGT 1 cut(s) 1660
MaeI CTAG 3 cut(s) 221, 921, 1161
MaeII ACGT 1 cut(s) 68
MaeIII GTNAC 1 cut(s) 1087
MalI GATC 7 cut(s) 191, 205, 540, 685, 943, 1375, 1681
MbiI CCGCTC 2 cut(s) 186, 1584
MboI GATC 7 cut(s) 189, 203, 538, 683, 941, 1373, 1679
MboII GAAGA 6 cut(s) 172, 416, 1092, 1137, 1524, 1527
MfeI CAATTG 1 cut(s) 419
MflI RGATCY 2 cut(s) 683, 1373
MhlI GDGCHC 5 cut(s) 380, 468, 700, 1054, 1281
MlsI TGGCCA 1 cut(s) 1481
MluCI AATT 6 cut(s) 419, 638, 776, 794, 845, 1385
MluNI TGGCCA 1 cut(s) 1481
MlyI GAGTC 1 cut(s) 1018
MmeI TCCRAC 3 cut(s) 986, 1045, 1130
Mox20I TGGCCA 1 cut(s) 1481
MroXI GAANNNNTTC 1 cut(s) 68
MscI TGGCCA 1 cut(s) 1481
MseI TTAA 6 cut(s) 77, 620, 689, 935, 1637, 1687
MslI CAYNNNNRTG 1 cut(s) 120
Msp20I TGGCCA 1 cut(s) 1481
MunI CAATTG 1 cut(s) 419
Mva1269I GAATGC 2 cut(s) 749, 1217
MvaI CCWGG 6 cut(s) 368, 984, 1047, 1200, 1487, 1662
MwoI GCNNNNNNNGC 7 cut(s) 40, 415, 424, 525, 554, 780, 1487
NciI CCSGG 5 cut(s) 449, 459, 493, 732, 1540
NdeI CATATG 1 cut(s) 946
NdeII GATC 7 cut(s) 189, 203, 538, 683, 941, 1373, 1679
NlaIII CATG 5 cut(s) 487, 677, 1304, 1383, 1411
NlaIV GGNNCC 7 cut(s) 377, 518, 600, 631, 685, 1023, 1491
NspI RCATGY 2 cut(s) 487, 1383
PaeR7I CTCGAG 1 cut(s) 534
PaqCI CACCTGC 1 cut(s) 278
PceI AGGCCT 3 cut(s) 215, 925, 1198
PciSI GCTCTTC 1 cut(s) 399
PctI GAATGC 2 cut(s) 749, 1217
PdmI GAANNNNTTC 1 cut(s) 68
PfeI GAWTC 6 cut(s) 236, 440, 976, 997, 1341, 1510
PflMI CCANNNNNTGG 2 cut(s) 674, 1046
PfoI TCCNGGA 3 cut(s) 982, 1045, 1538
PkrI GCNGC 8 cut(s) 52, 100, 286, 313, 385, 437, 547, 1166
Ple19I CGATCG 2 cut(s) 192, 1682
PleI GAGTC 1 cut(s) 1017
PpsI GAGTC 1 cut(s) 1017
PpuMI RGGWCCY 1 cut(s) 630
Psp124BI GAGCTC 2 cut(s) 700, 1054
Psp5II RGGWCCY 1 cut(s) 630
Psp6I CCWGG 6 cut(s) 366, 982, 1045, 1198, 1485, 1660
PspGI CCWGG 6 cut(s) 366, 982, 1045, 1198, 1485, 1660
PspN4I GGNNCC 7 cut(s) 377, 518, 600, 631, 685, 1023, 1491
PspPI GGNCC 5 cut(s) 630, 965, 1154, 1250, 1518
PspPPI RGGWCCY 1 cut(s) 630
PstI CTGCAG 1 cut(s) 289
PsuI RGATCY 2 cut(s) 683, 1373
PvuI CGATCG 2 cut(s) 192, 1682
RsaI GTAC 9 cut(s) 61, 244, 294, 335, 446, 524, 1038, 1220, 1415
RsaNI GTAC 9 cut(s) 60, 243, 293, 334, 445, 523, 1037, 1219, 1414
RseI CAYNNNNRTG 1 cut(s) 120
SacI GAGCTC 2 cut(s) 700, 1054
SapI GCTCTTC 1 cut(s) 399
SaqAI TTAA 6 cut(s) 77, 620, 689, 935, 1637, 1687
SatI GCNGC 8 cut(s) 51, 99, 285, 312, 384, 436, 546, 1165
Sau3AI GATC 7 cut(s) 189, 203, 538, 683, 941, 1373, 1679
Sau96I GGNCC 5 cut(s) 630, 965, 1154, 1250, 1518
ScaI AGTACT 1 cut(s) 1220
SchI GAGTC 1 cut(s) 1018
SduI GDGCHC 5 cut(s) 380, 468, 700, 1054, 1281
SexAI ACCWGGT 1 cut(s) 1660
SfaNI GCATC 2 cut(s) 908, 1272
SfcI CTRYAG 2 cut(s) 285, 570
Sfr274I CTCGAG 1 cut(s) 534
SinI GGWCC 4 cut(s) 630, 965, 1154, 1250
SlaI CTCGAG 1 cut(s) 534
SmiMI CAYNNNNRTG 1 cut(s) 120
SmlI CTYRAG 2 cut(s) 534, 1549
SmoI CTYRAG 2 cut(s) 534, 1549
Sse9I AATT 6 cut(s) 419, 638, 776, 794, 845, 1385
SseBI AGGCCT 3 cut(s) 215, 925, 1198
SsiI CCGC 7 cut(s) 184, 312, 348, 381, 548, 1317, 1584
SspI AATATT 1 cut(s) 709
SspMI CTAG 3 cut(s) 221, 921, 1161
SstI GAGCTC 2 cut(s) 700, 1054
StuI AGGCCT 3 cut(s) 215, 925, 1198
TaiI ACGT 1 cut(s) 71
TaqI TCGA 8 cut(s) 188, 192, 362, 402, 535, 1508, 1678, 1682
TasI AATT 6 cut(s) 419, 638, 776, 794, 845, 1385
TatI WGTACW 3 cut(s) 242, 292, 1218
TauI GCSGC 1 cut(s) 314
TfiI GAWTC 6 cut(s) 236, 440, 976, 997, 1341, 1510
Tru1I TTAA 6 cut(s) 77, 620, 689, 935, 1637, 1687
Tru9I TTAA 6 cut(s) 77, 620, 689, 935, 1637, 1687
TscAI CASTG 2 cut(s) 125, 1367
TseI GCWGC 7 cut(s) 50, 98, 284, 383, 435, 545, 1164
TspDTI ATGAA 4 cut(s) 17, 756, 1419, 1617
TspGWI ACGGA 6 cut(s) 127, 351, 843, 1002, 1098, 1128
TspRI CASTG 2 cut(s) 125, 1367
Van91I CCANNNNNTGG 2 cut(s) 674, 1046
VpaK11BI GGWCC 4 cut(s) 630, 965, 1154, 1250
XapI RAATTY 4 cut(s) 638, 776, 794, 1385
XbaI TCTAGA 1 cut(s) 220
XceI RCATGY 2 cut(s) 487, 1383
XcmI CCANNNNNNNNNTGG 2 cut(s) 671, 913
XhoI CTCGAG 1 cut(s) 534
XmiI GTMKAC 1 cut(s) 477
XmnI GAANNNNTTC 1 cut(s) 68
XspI CTAG 3 cut(s) 221, 921, 1161
ZrmI AGTACT 1 cut(s) 1220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.