Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0008307

Physical Location & Seq

Genomic Coordinates Forward (+)

23291513 .. 23297347

Gene Structure 5835 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g23490.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGCTGCTCCCACGCCCGCCATTATTAAGCTCTGCAGCCTTCTCCTTCTTTTACTTTTAGTTTGCGGTCTTTTCGAGCAACCCAAAACTTGCGAAGCCGGTGAGTCCTTCGCTTGCAACCCAAAAGATGCGGCAACCAAGGACTTGCCGTTTTGCCGTGCGACATTGCCCGTACAAGACAGAGTGAGGGACCTTCTCGGAAGGTTGACATTGCAAGAGAAGGTTAAGCTGCTGGTGAACACTGCTCTGCCTGTCCCACGCCTTGGCATCAAAGGCTACGAATGGTGGTCCGAGGCACTTCACGGCGTTTCCAATGTGGGCCCCGGGACTAAGTTTGGTGGGGACTTCCCTGGCGCCACTAGCTTCCCTCAAGTCATTACAACCACTGCTTCCTTCAATGCTTCTCTGTGGGAAGCCATCGGACGGGTCGTGTCAGACGAAGCAAGAGCAATGTACAACGGCGGTGTGGCTGGCCTTACGTATTGGAGCCCAAATGTGAACGTACTGAGAGACCCACGGTGGGGCCGGGCACAGGAGACTCCCGGTGAAGACCCAACCGTGGTGGGTAGATATGCTGCCAGCTACGTTAGGGGGTTGCAGGGAAATGACGGTAACCGGTTGAAGGTGGCGGCTTGCTGTAAGCACTTCACCGCTTATGACCTCGACAACTGGAATGGAGTTGATCGTTTTCACTTTAACGCCAAGGTGAGCAAGCAGGACATGGAGGACACATTCGATGTGCCATTTAGGATGTGCGTCGAGGAAGGAAAGGTGGCGAGTGTCATGTGTTCTTACAATCAGGTCAATGGTGTCCCCACCTGTGCCGACCCTAATCTCCTCAAAAAAACTGTACGCGGTGCATGGCGCCTCGACGGCTACATTGTGTCCGATTGCGACTCAGTGGGAGTGTTCTATAATAGTCAACACTACACCTCAACGCCCGAAGAAGCCGCTGCCGATGCCATTAAAGCAGGTTTGGATTTAGACTGTGGGTCATTCCTGGCCGTGCACTCGGAGGAAGCAGTGAACAAGGGGTTGTTGAAGGAGGTTGACGTCAACAATGCATTGGTGAATACTGTGACTGTCCAAATGAGACTCGGGATGTTTGATGGAGACCGCGGGGCCTATGCAAGATTGGGCCCCAAAGATGTATGCAGCCCACCTCATCAGGATCTCGCGCTTGAGGCCGCCACGCAAGGCATCGTCCTCCTCAAGAATCACGGGCCTTCGCTCCCATTGTCCACCCATCGTCACCACACTCTTGCTGTCATCGGCCCCAATTCTGATGTGACTCTCACAATGATTGGCAACTATGCCGGTGTGGCATGTGGATACACCACGCCCCTCCAAGGGCTTGGGAGTTTTGCACGCACAATACACCGGTGGGGTTGTGCGGATGTTGCATGCGCCAACAACACGTTATTCGGTGCAGCCATCGACGCATCCCGGGAAGCGGATGCTACTGTTTTGGTGATGGGACTTGACCAATCCATTGAGGCTGAATTTAGAGACCGAGCTGGGCTGCTTTTGCCTGGAGGACAACAAGACCTCATATCAAAGGTTGCCGCAGCATCCAAAGGCCCAACTATTTTGGTATTGATGTCTGGTGGCCCAGTTGACGTGTCTTTTGCTAACAATGACCCGCGCATCGGTGGAATCGTATGGGCTGGGTACCCGGGCCAAGCTGGTGGAGCAGCCATCGCTCGTGTTCTGTTTGGAATCATAAACCCAGGAGGAAAGCTGCCTATGACGTGGTATCAAGAGGAGTACCTTAAAAATTTGGCAATGACATCGATGAACATGAGGTCAAACCCATCAAAAGGGTACCCGGGAAGAACCTACAGATTCTACAAAGGGCCAGTGGTTTACCCATTTGGGCATGGATTAAGCTACACCAAATTTATTCTTAGCATAGCAGCCGGTACTGCACCCACCGTGGTTGGAATCCCGCTCGATGGCCGTCATCGCGCCTCTCAAATTAACACAACCACAACCGTTGATTCGGACAATGTCAAGGCGATCCGAGTGACACATGCAAAATGCAGTAGGGTTTCGGTGAGTTTTGATGTGGACGTGAGAAATGTGGGCAACAGAGACGGGTCTCACACTTTGTTAGTGCTCTCTACCCCTCCAGCACAAGACTGGGCTCCTCACAAACAGCTGGTTGCCTTTGAGAAAGTGTATGTTCCGGCCAGGGCTCAACGGCGGGTGCGAATCAAAATTCATGTGTGCAAGTCCCTTAGTGTGGTGGACAGGTTTGGAATTCGAAGAATTCCAATGGGACAACACAATCTTCACATTGGTGACCTCATGCACTCTGTCTCCCTCAAACCCGCCACTTCATTAGGGTTGGGGGTCATCAAATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0009505 GO:0030312 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

790

Amino Acids

84.99

Weight (kDa)

8.65

Isoelectric Point (pI)

29.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02640
fragaria_vesca	FvH4_5g39430 FvH4_5g39430 FvH4_5g39430 FvH4_5g39430
malus_domestica	MD03G1296500.v1.1 MD11G1315900.v1.1
prunus_persica	Prupe.8G270800_v2.0.a1 Prupe.8G270800_v2.0.a1
pyrus_communis	pycom03g23490 pycom11g27580
rosa_chinensis	RchiOBHm_Chr7g0241741
rosa_laevigata	RLG00000000548
rosa_multiflora	Rmu_co8482979.1_g000001 Rmu_sc0010736.1_g000003 Rmu_sc0029163.1_g000002
rosa_roxburghii	Rroxscaffold_3G00218710
rosa_rugosa	Rorug07G0346900
rosa_samantha	Rh7AG501300 Rh7BG472600 Rh7CG517600 Rh7DG486300
rosa_wichuraiana	Rw7G042370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1056
Acc36I	ACCTGC	1 cut(s)	962
Acc65I	GGTACC	2 cut(s)	1671, 1824
AccB1I	GGYRCC	4 cut(s)	353, 864, 1671, 1824
AccB7I	CCANNNNNTGG	1 cut(s)	263
AccBSI	CCGCTC	1 cut(s)	1951
AccII	CGCG	5 cut(s)	855, 1119, 1178, 1645, 1968
AclWI	GGATC	2 cut(s)	1179, 2014
AcoI	YGGCCR	3 cut(s)	1002, 1957, 2190
AcsI	RAATTY	6 cut(s)	1502, 1777, 1898, 2220, 2262, 2271
AcyI	GRCGYC	3 cut(s)	354, 865, 1053
AfaI	GTAC	8 cut(s)	174, 455, 504, 852, 1673, 1769, 1826, 1924
AflIII	ACRYGT	2 cut(s)	1416, 1620
AgeI	ACCGGT	2 cut(s)	615, 1380
AgsI	TTSAA	3 cut(s)	397, 622, 1042
AhdI	GACNNNNNGTC	1 cut(s)	991
AjiI	CACGTC	3 cut(s)	1621, 1752, 2074
AjnI	CCWGG	5 cut(s)	349, 999, 1531, 1729, 2192
AleI	CACNNNNGTG	1 cut(s)	2301
AluBI	AGCT	9 cut(s)	31, 229, 363, 582, 1517, 1685, 1741, 1890, 2161
AluI	AGCT	9 cut(s)	31, 229, 363, 582, 1517, 1685, 1741, 1890, 2161
Alw21I	GWGCWC	2 cut(s)	1011, 2121
Alw26I	GTCTC	8 cut(s)	504, 530, 1087, 1107, 1503, 2088, 2106, 2326
Alw44I	GTGCAC	1 cut(s)	1007
AlwI	GGATC	2 cut(s)	1179, 2014
Ama87I	CYCGRG	5 cut(s)	323, 1097, 1446, 1675, 1828
ApaI	GGGCCC	2 cut(s)	323, 1142
ApaLI	GTGCAC	1 cut(s)	1007
ApoI	RAATTY	6 cut(s)	1502, 1777, 1898, 2220, 2262, 2271
ArsI	GACNNNNNNTTYG	2 cut(s)	1610, 1642
AsiGI	ACCGGT	2 cut(s)	615, 1380
Asp718I	GGTACC	2 cut(s)	1671, 1824
AspLEI	GCGC	6 cut(s)	356, 867, 1180, 1409, 1647, 1970
AsuII	TTCGAA	1 cut(s)	2266
AvaI	CYCGRG	5 cut(s)	323, 1097, 1446, 1675, 1828
AvaII	GGWCC	2 cut(s)	190, 288
BaeGI	GKGCMC	4 cut(s)	323, 532, 1011, 1142
BanI	GGYRCC	4 cut(s)	353, 864, 1671, 1824
BanII	GRGCYC	5 cut(s)	323, 491, 1142, 2149, 2200
BauI	CACGAG	1 cut(s)	1704
BbsI	GAAGAC	1 cut(s)	555
Bbv12I	GWGCWC	2 cut(s)	1011, 2121
BccI	CCATC	8 cut(s)	425, 1103, 1254, 1442, 1468, 1706, 1822, 1949
BceAI	ACGGC	8 cut(s)	133, 141, 319, 475, 889, 989, 1944, 2219
BcgI	CGANNNNNNTGC	2 cut(s)	1773, 1807
BciT130I	CCWGG	5 cut(s)	351, 1001, 1533, 1731, 2194
BciVI	GTATCC	1 cut(s)	1325
BcoDI	GTCTC	8 cut(s)	504, 530, 1087, 1107, 1503, 2088, 2106, 2326
BfaI	CTAG	1 cut(s)	360
BfmI	CTRYAG	2 cut(s)	34, 1840
BfoI	RGCGCY	2 cut(s)	357, 868
BfuAI	ACCTGC	1 cut(s)	962
BfuI	GTATCC	1 cut(s)	1325
BglI	GCCNNNNNGGC	2 cut(s)	873, 1322
Bme18I	GGWCC	2 cut(s)	190, 288
BmeRI	GACNNNNNGTC	1 cut(s)	991
BmeT110I	CYCGRG	5 cut(s)	323, 1097, 1446, 1675, 1828
BmgBI	CACGTC	3 cut(s)	1621, 1752, 2074
BmrI	ACTGGG	2 cut(s)	1607, 2152
BmsI	GCATC	8 cut(s)	118, 276, 949, 1209, 1447, 1451, 1580, 1656
BmuI	ACTGGG	2 cut(s)	1607, 2152
BpiI	GAAGAC	1 cut(s)	555
BpmI	CTGGAG	2 cut(s)	1554, 2115
Bpu14I	TTCGAA	1 cut(s)	2266
BpuEI	CTTGAG	3 cut(s)	354, 1196, 1202
Bsa29I	ATCGAT	1 cut(s)	1793
BsaAI	YACGTR	1 cut(s)	480
BsaHI	GRCGYC	3 cut(s)	354, 865, 1053
BsaI	GGTCTC	4 cut(s)	504, 1107, 1503, 2106
BsaWI	WCCGGW	2 cut(s)	615, 1380
BsaXI	ACNNNNNCTCC	2 cut(s)	2306, 2336
Bse118I	RCCGGY	5 cut(s)	98, 615, 1316, 1380, 1919
Bse1I	ACTGG	4 cut(s)	674, 1613, 1859, 2147
Bse3DI	GCAATG	4 cut(s)	164, 209, 456, 1791
BseBI	CCWGG	5 cut(s)	351, 1001, 1533, 1731, 2194
BseCI	ATCGAT	1 cut(s)	1793
BseGI	GGATG	6 cut(s)	756, 1107, 1402, 1442, 1462, 1571
BseMI	GCAATG	4 cut(s)	164, 209, 456, 1791
BseMII	CTCAG	2 cut(s)	497, 912
BseNI	ACTGG	4 cut(s)	674, 1613, 1859, 2147
BseRI	GAGGAG	4 cut(s)	827, 1199, 1778, 2139
BseSI	GKGCMC	4 cut(s)	323, 532, 1011, 1142
BseYI	CCCAGC	2 cut(s)	1517, 1667
BsgI	GTGCAG	2 cut(s)	1449, 1911
Bsh1236I	CGCG	5 cut(s)	855, 1119, 1178, 1645, 1968
BshNI	GGYRCC	4 cut(s)	353, 864, 1671, 1824
BshTI	ACCGGT	2 cut(s)	615, 1380
BshVI	ATCGAT	1 cut(s)	1793
BsiHKAI	GWGCWC	2 cut(s)	1011, 2121
BsiHKCI	CYCGRG	5 cut(s)	323, 1097, 1446, 1675, 1828
BslFI	GGGAC	8 cut(s)	203, 239, 340, 356, 797, 1491, 2221, 2295
BsmAI	GTCTC	8 cut(s)	504, 530, 1087, 1107, 1503, 2088, 2106, 2326
BsmBI	CGTCTC	1 cut(s)	2088
BsmFI	GGGAC	8 cut(s)	203, 239, 340, 356, 797, 1491, 2221, 2295
Bso31I	GGTCTC	4 cut(s)	504, 1107, 1503, 2106
BsoBI	CYCGRG	5 cut(s)	323, 1097, 1446, 1675, 1828
Bsp119I	TTCGAA	1 cut(s)	2266
Bsp120I	GGGCCC	2 cut(s)	319, 1138
Bsp1286I	GDGCHC	8 cut(s)	323, 491, 532, 1011, 1142, 2121, 2149, 2200
Bsp1407I	TGTACA	1 cut(s)	453
Bsp143I	GATC	3 cut(s)	682, 1171, 2019
BspCNI	CTCAG	2 cut(s)	498, 911
BspDI	ATCGAT	1 cut(s)	1793
BspFNI	CGCG	5 cut(s)	855, 1119, 1178, 1645, 1968
BspMAI	CTGCAG	1 cut(s)	38
BspMI	ACCTGC	1 cut(s)	962
BspPI	GGATC	2 cut(s)	1179, 2014
BspT104I	TTCGAA	1 cut(s)	2266
BspT107I	GGYRCC	4 cut(s)	353, 864, 1671, 1824
BspTNI	GGTCTC	4 cut(s)	504, 1107, 1503, 2106
BsrBI	CCGCTC	1 cut(s)	1951
BsrDI	GCAATG	4 cut(s)	164, 209, 456, 1791
BsrFI	RCCGGY	5 cut(s)	98, 615, 1316, 1380, 1919
BsrGI	TGTACA	1 cut(s)	453
BsrI	ACTGG	4 cut(s)	674, 1613, 1859, 2147
BssAI	RCCGGY	5 cut(s)	98, 615, 1316, 1380, 1919
BssMI	GATC	3 cut(s)	682, 1171, 2019
BssNI	GRCGYC	3 cut(s)	354, 865, 1053
BssSI	CACGAG	1 cut(s)	1704
BssT1I	CCWWGG	4 cut(s)	138, 262, 702, 1348
Bst2BI	CACGAG	1 cut(s)	1704
Bst2UI	CCWGG	5 cut(s)	351, 1001, 1533, 1731, 2194
BstACI	GRCGYC	3 cut(s)	354, 865, 1053
BstAUI	TGTACA	1 cut(s)	453
BstBAI	YACGTR	1 cut(s)	480
BstBI	TTCGAA	1 cut(s)	2266
BstC8I	GCNNGC	8 cut(s)	18, 115, 472, 580, 634, 713, 1369, 1405
BstDEI	CTNAG	5 cut(s)	330, 506, 898, 1907, 2240
BstDSI	CCRYGG	4 cut(s)	515, 558, 1117, 1935
BstEII	GGTNACC	2 cut(s)	611, 2303
BstF5I	GGATG	6 cut(s)	756, 1107, 1402, 1442, 1462, 1571
BstFNI	CGCG	5 cut(s)	855, 1119, 1178, 1645, 1968
BstH2I	RGCGCY	2 cut(s)	357, 868
BstHHI	GCGC	6 cut(s)	356, 867, 1180, 1409, 1647, 1970
BstKTI	GATC	3 cut(s)	685, 1174, 2022
BstMAI	GTCTC	8 cut(s)	504, 530, 1087, 1107, 1503, 2088, 2106, 2326
BstMBI	GATC	3 cut(s)	682, 1171, 2019
BstNI	CCWGG	5 cut(s)	351, 1001, 1533, 1731, 2194
BstNSI	RCATGY	3 cut(s)	1329, 1407, 2036
BstPI	GGTNACC	2 cut(s)	611, 2303
BstSFI	CTRYAG	2 cut(s)	34, 1840
BstSLI	GKGCMC	4 cut(s)	323, 532, 1011, 1142
BstSNI	TACGTA	1 cut(s)	480
BstUI	CGCG	5 cut(s)	855, 1119, 1178, 1645, 1968
BstV2I	GAAGAC	1 cut(s)	555
BstX2I	RGATCY	1 cut(s)	1171
BstXI	CCANNNNNNTGG	2 cut(s)	1355, 1688
BstYI	RGATCY	1 cut(s)	1171
Bsu15I	ATCGAT	1 cut(s)	1793
BsuI	GTATCC	1 cut(s)	1325
BsuTUI	ATCGAT	1 cut(s)	1793
BtgI	CCRYGG	4 cut(s)	515, 558, 1117, 1935
BtgZI	GCGATG	2 cut(s)	1684, 1949
BtrI	CACGTC	3 cut(s)	1621, 1752, 2074
BtsCI	GGATG	6 cut(s)	756, 1107, 1402, 1442, 1462, 1571
BtsI	GCAGTG	3 cut(s)	240, 384, 1029
BtsIMutI	CAGTG	5 cut(s)	240, 384, 906, 1029, 1866
BveI	ACCTGC	1 cut(s)	962
Cac8I	GCNNGC	8 cut(s)	18, 115, 472, 580, 634, 713, 1369, 1405
CfoI	GCGC	6 cut(s)	356, 867, 1180, 1409, 1647, 1970
Cfr10I	RCCGGY	5 cut(s)	98, 615, 1316, 1380, 1919
Cfr42I	CCGCGG	1 cut(s)	1120
Cfr9I	CCCGGG	4 cut(s)	323, 1446, 1675, 1828
ClaI	ATCGAT	1 cut(s)	1793
CseI	GACGC	2 cut(s)	745, 1448
Csp6I	GTAC	8 cut(s)	173, 454, 503, 851, 1672, 1768, 1825, 1923
CspAI	ACCGGT	2 cut(s)	615, 1380
CspCI	CAANNNNNGTGG	6 cut(s)	543, 578, 1921, 1956, 1978, 2013
CviQI	GTAC	8 cut(s)	173, 454, 503, 851, 1672, 1768, 1825, 1923
DdeI	CTNAG	5 cut(s)	330, 506, 898, 1907, 2240
DinI	GGCGCC	2 cut(s)	355, 866
DpnI	GATC	3 cut(s)	684, 1173, 2021
DpnII	GATC	3 cut(s)	682, 1171, 2019
DriI	GACNNNNNGTC	1 cut(s)	991
EaeI	YGGCCR	3 cut(s)	1002, 1957, 2190
Eam1105I	GACNNNNNGTC	1 cut(s)	991
Eco105I	TACGTA	1 cut(s)	480
Eco130I	CCWWGG	4 cut(s)	138, 262, 702, 1348
Eco24I	GRGCYC	5 cut(s)	323, 491, 1142, 2149, 2200
Eco31I	GGTCTC	4 cut(s)	504, 1107, 1503, 2106
Eco47I	GGWCC	2 cut(s)	190, 288
Eco88I	CYCGRG	5 cut(s)	323, 1097, 1446, 1675, 1828
Eco91I	GGTNACC	2 cut(s)	611, 2303
EcoO109I	RGGNCCY	4 cut(s)	190, 320, 1122, 1139
EcoO65I	GGTNACC	2 cut(s)	611, 2303
EcoRI	GAATTC	2 cut(s)	2262, 2271
EcoRII	CCWGG	5 cut(s)	349, 999, 1531, 1729, 2192
EcoT14I	CCWWGG	4 cut(s)	138, 262, 702, 1348
EcoT22I	ATGCAT	1 cut(s)	1066
EcoT38I	GRGCYC	5 cut(s)	323, 491, 1142, 2149, 2200
EgeI	GGCGCC	2 cut(s)	355, 866
EheI	GGCGCC	2 cut(s)	355, 866
ErhI	CCWWGG	4 cut(s)	138, 262, 702, 1348
Esp3I	CGTCTC	1 cut(s)	2088
FaqI	GGGAC	8 cut(s)	203, 239, 340, 356, 797, 1491, 2221, 2295
FauI	CCCGC	6 cut(s)	25, 1112, 1650, 1956, 2199, 2341
FokI	GGATG	6 cut(s)	763, 1114, 1409, 1429, 1469, 1558
FriOI	GRGCYC	5 cut(s)	323, 491, 1142, 2149, 2200
FspBI	CTAG	1 cut(s)	360
GlaI	GCGC	6 cut(s)	355, 866, 1179, 1408, 1646, 1969
GsaI	CCCAGC	2 cut(s)	1521, 1671
GsuI	CTGGAG	2 cut(s)	1554, 2115
HaeII	RGCGCY	2 cut(s)	357, 868
HgaI	GACGC	2 cut(s)	745, 1448
HhaI	GCGC	6 cut(s)	356, 867, 1180, 1409, 1647, 1970
Hin1I	GRCGYC	3 cut(s)	354, 865, 1053
Hin6I	GCGC	6 cut(s)	354, 865, 1178, 1407, 1645, 1968
HinP1I	GCGC	6 cut(s)	354, 865, 1178, 1407, 1645, 1968
HincII	GTYRAC	5 cut(s)	207, 923, 1051, 1057, 1618
HindII	GTYRAC	5 cut(s)	207, 923, 1051, 1057, 1618
Hpy188I	TCNGA	9 cut(s)	200, 292, 422, 436, 889, 1015, 1285, 2005, 2024
Hpy188III	TCNNGA	4 cut(s)	1099, 1169, 1213, 1760
Hpy99I	CGWCG	3 cut(s)	761, 875, 1442
HpyCH4IV	ACGT	8 cut(s)	479, 501, 585, 1053, 1418, 1620, 1751, 2073
HpyF3I	CTNAG	5 cut(s)	330, 506, 898, 1907, 2240
HpySE526I	ACGT	8 cut(s)	479, 501, 585, 1053, 1418, 1620, 1751, 2073
Hsp92I	GRCGYC	3 cut(s)	354, 865, 1053
HspAI	GCGC	6 cut(s)	354, 865, 1178, 1407, 1645, 1968
KasI	GGCGCC	2 cut(s)	353, 864
KpnI	GGTACC	2 cut(s)	1675, 1828
KspI	CCGCGG	1 cut(s)	1120
Kzo9I	GATC	3 cut(s)	682, 1171, 2019
LmnI	GCTCC	5 cut(s)	13, 486, 1236, 1691, 2152
LweI	GCATC	8 cut(s)	118, 276, 949, 1209, 1447, 1451, 1580, 1656
MaeI	CTAG	1 cut(s)	360
MaeII	ACGT	8 cut(s)	479, 501, 585, 1053, 1418, 1620, 1751, 2073
MaeIII	GTNAC	6 cut(s)	611, 1078, 1250, 1288, 2026, 2303
MalI	GATC	3 cut(s)	684, 1173, 2021
MbiI	CCGCTC	1 cut(s)	1951
MboI	GATC	3 cut(s)	682, 1171, 2019
MboII	GAAGA	5 cut(s)	560, 956, 1845, 2280, 2285
MflI	RGATCY	1 cut(s)	1171
MhlI	GDGCHC	8 cut(s)	323, 491, 532, 1011, 1142, 2121, 2149, 2200
MluCI	AATT	8 cut(s)	1279, 1502, 1777, 1898, 1977, 2220, 2262, 2271
Mly113I	GGCGCC	2 cut(s)	354, 865
MlyI	GAGTC	5 cut(s)	113, 532, 890, 1089, 1285
MmeI	TCCRAC	1 cut(s)	1921
Mph1103I	ATGCAT	1 cut(s)	1066
MseI	TTAA	8 cut(s)	27, 225, 696, 966, 1773, 1886, 1980, 2368
MslI	CAYNNNNRTG	1 cut(s)	2301
MspA1I	CMGCKG	3 cut(s)	953, 1119, 2161
MvaI	CCWGG	5 cut(s)	351, 1001, 1533, 1731, 2194
MvnI	CGCG	5 cut(s)	855, 1119, 1178, 1645, 1968
NarI	GGCGCC	2 cut(s)	354, 865
NdeII	GATC	3 cut(s)	682, 1171, 2019
NmuCI	GTSAC	5 cut(s)	1078, 1250, 1288, 2026, 2303
NsiI	ATGCAT	1 cut(s)	1066
NspI	RCATGY	3 cut(s)	1329, 1407, 2036
NspV	TTCGAA	1 cut(s)	2266
OliI	CACNNNNGTG	1 cut(s)	2301
PaeI	GCATGC	1 cut(s)	1407
PcsI	WCGNNNNNNNCGW	4 cut(s)	426, 435, 1656, 2209
PfeI	GAWTC	7 cut(s)	1216, 1656, 1719, 1845, 1944, 2000, 2214
PflFI	GACNNNGTC	1 cut(s)	2009
PflMI	CCANNNNNTGG	1 cut(s)	263
PinAI	ACCGGT	2 cut(s)	615, 1380
PleI	GAGTC	5 cut(s)	112, 532, 890, 1089, 1285
PluTI	GGCGCC	2 cut(s)	357, 868
PpsI	GAGTC	5 cut(s)	112, 532, 890, 1089, 1285
Ppu21I	YACGTR	1 cut(s)	480
PpuMI	RGGWCCY	1 cut(s)	190
Psp5II	RGGWCCY	1 cut(s)	190
Psp6I	CCWGG	5 cut(s)	349, 999, 1531, 1729, 2192
PspEI	GGTNACC	2 cut(s)	611, 2303
PspFI	CCCAGC	2 cut(s)	1517, 1667
PspGI	CCWGG	5 cut(s)	349, 999, 1531, 1729, 2192
PspOMI	GGGCCC	2 cut(s)	319, 1138
PspPPI	RGGWCCY	1 cut(s)	190
PstI	CTGCAG	1 cut(s)	38
PsuI	RGATCY	1 cut(s)	1171
PsyI	GACNNNGTC	1 cut(s)	2009
PvuII	CAGCTG	1 cut(s)	2161
RsaI	GTAC	8 cut(s)	174, 455, 504, 852, 1673, 1769, 1826, 1924
RsaNI	GTAC	8 cut(s)	173, 454, 503, 851, 1672, 1768, 1825, 1923
RseI	CAYNNNNRTG	1 cut(s)	2301
SacII	CCGCGG	1 cut(s)	1120
SaqAI	TTAA	8 cut(s)	27, 225, 696, 966, 1773, 1886, 1980, 2368
Sau3AI	GATC	3 cut(s)	682, 1171, 2019
SchI	GAGTC	5 cut(s)	113, 532, 890, 1089, 1285
SduI	GDGCHC	8 cut(s)	323, 491, 532, 1011, 1142, 2121, 2149, 2200
SfaNI	GCATC	8 cut(s)	118, 276, 949, 1209, 1447, 1451, 1580, 1656
SfcI	CTRYAG	2 cut(s)	34, 1840
SfoI	GGCGCC	2 cut(s)	355, 866
Sfr303I	CCGCGG	1 cut(s)	1120
SfuI	TTCGAA	1 cut(s)	2266
SgrAI	CRCCGGYG	1 cut(s)	1380
SgrBI	CCGCGG	1 cut(s)	1120
SinI	GGWCC	2 cut(s)	190, 288
SmaI	CCCGGG	4 cut(s)	325, 1448, 1677, 1830
SmiMI	CAYNNNNRTG	1 cut(s)	2301
SmlI	CTYRAG	3 cut(s)	369, 1181, 1211
SmoI	CTYRAG	3 cut(s)	369, 1181, 1211
SnaBI	TACGTA	1 cut(s)	480
SphI	GCATGC	1 cut(s)	1407
Sse9I	AATT	8 cut(s)	1279, 1502, 1777, 1898, 1977, 2220, 2262, 2271
SspDI	GGCGCC	2 cut(s)	353, 864
SspMI	CTAG	1 cut(s)	360
StyI	CCWWGG	4 cut(s)	138, 262, 702, 1348
TaiI	ACGT	8 cut(s)	482, 504, 588, 1056, 1421, 1623, 1754, 2076
TaqI	TCGA	9 cut(s)	75, 663, 735, 759, 870, 1437, 1793, 1953, 2266
TaqII	GACCGA	1 cut(s)	1527
TasI	AATT	8 cut(s)	1279, 1502, 1777, 1898, 1977, 2220, 2262, 2271
TatI	WGTACW	1 cut(s)	453
TauI	GCSGC	5 cut(s)	134, 632, 953, 1190, 1568
TfiI	GAWTC	7 cut(s)	1216, 1656, 1719, 1845, 1944, 2000, 2214
Tru1I	TTAA	8 cut(s)	27, 225, 696, 966, 1773, 1886, 1980, 2368
Tru9I	TTAA	8 cut(s)	27, 225, 696, 966, 1773, 1886, 1980, 2368
TscAI	CASTG	5 cut(s)	247, 391, 906, 1029, 1866
TseFI	GTSAC	5 cut(s)	1078, 1250, 1288, 2026, 2303
Tsp45I	GTSAC	5 cut(s)	1078, 1250, 1288, 2026, 2303
TspDTI	ATGAA	3 cut(s)	1811, 2213, 2331
TspMI	CCCGGG	4 cut(s)	323, 1446, 1675, 1828
TspRI	CASTG	5 cut(s)	247, 391, 906, 1029, 1866
Tth111I	GACNNNGTC	1 cut(s)	2009
Van91I	CCANNNNNTGG	1 cut(s)	263
VneI	GTGCAC	1 cut(s)	1007
VpaK11BI	GGWCC	2 cut(s)	190, 288
XapI	RAATTY	6 cut(s)	1502, 1777, 1898, 2220, 2262, 2271
XceI	RCATGY	3 cut(s)	1329, 1407, 2036
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2139
XmaI	CCCGGG	4 cut(s)	323, 1446, 1675, 1828
XspI	CTAG	1 cut(s)	360
ZraI	GACGTC	1 cut(s)	1054
Zsp2I	ATGCAT	1 cut(s)	1066

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.