Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0008307

Physical Location & Seq

Genomic Coordinates Forward (+)

69641403 .. 69646299

Gene Structure 4897 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG517600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGCTTCCACCACCACCATGGCCTCCCTCTGCCTTTTACTCTTCATCCTTTTGCAAACAACTAGCAGCAAAGCGGCCGGCGAGTCTCCGACGTCATTCGCTTGCAGCCCGAACGACGCAAGCACCAAGGACTTGCCGTTTTGCCGCGTAAAGTTGCCGATACATGTGAGAGTGAGGGACCTGATCGGAAGGCTGACGTTGCAAGAGAAGGTGAAGCTGCTGGTGAACACTGCCAAGGCCGTGCCGCGCCTTGGGATCAAAGACTATGAATGGTGGTCGGAGGCACTTCATGGGGTCTCCAATGTGGGTCCCGGAACCAAGTTTGGCGGGGCGTTTCCGGGAGCCACCAGCTTCCCTCAGGTCATCACCACCGCTGCTTCCTTCAATGCTTCTCTGTGGGAAGCCATCGGACGGGTTGTGTCAGACGAAGCAAGAGCAATGTATAATGGAGGTATGGGCGGGCTCACGTATTGGAGTCCAAATGTGAACGTACTCAGAGACCCGAGATGGGGCCGCGGACAGGAAACTCCCGGTGAAGATCCGGTTGTGGTCGGAGCATATGCTGCCAGCTACGTCAGGGGTTTACAGGGAAATGACGGCGGCGGTCACCACTTGAAGGTGGCTGCTTGCTGTAAACACTTCACGGCTTACGACCTTGATAACTGGCATGGAGTCGATCGATTTCACTTCAACGCTAGGGTTAGCAAGCAGGACATGGAGGACACATTCGACGTTCCTTTCAGGATGTGCGTCAAAGATGGAAAGGTGGCGAGTGTTATGTGCTCTTACAATCAGGTCAATGGTATCCCAACCTGTGCAGATCCTAATCTCCTCAAGAAAACTGTACGTGCTCAATGGGGGCTTGATGGCTACATTGTGTCTGATTGCGATTCAGTGGGCGTTTTCTATGACAACCAACACTACACATCAACACCAGAAGAAGCAGCTGCTGCTGCCCTCAAAGCAGGTTTGGATTTAGACTGTGGCCCATTCCTGGGGTTGCACACTGAGGATGCAGTGAAGAAGGGTTTGTTGAGTGAGGTTGATCATATCGACCTTGCATTGGCTAATACACTCACAGTCCAAATGAGACTGGGCATGTTTGATGGATCTGCGCATCCTTATGCTAATTTAGGTCCCAGGGATGTCTGCAGCCCAGCTCACCAGCAACTCGCTCTTGACGCTGCCACCCAAGGCATTGTTCTTCTCAAGAACCGTGGCTCTTCCCTGCCTTTATCCACCCGCCGCCACCGCACTGTAGCTGTCATTGGTCCCAATTCTGATGTTACTGTTACTATGATCGGTAACTATGCCGGTGTTGCTTGTGGGTACACTACACCCCTACAAGGAATAGGAAAATACACCAGGACAGTTCACCAGCAGGGTTGCAGCGATGTAGCTTGCAAAGACGACACATTGTTTGGTGCAGCCATTGATGCAGCTCGTCAAGCCGATGCGACCATTTTAGTAATGGGCCTCGACCAGTCCATCGAGGCGGAGTTCAGAGACCGAGTCGGGCTACTTTTACCTGGACGGCAACAAGAGCTCATATCTAAAGTTGCTGCATCCTCTAAAGGCCCAACCATTCTGGTCTTGATGTCTGGCGGCCCAGTTGATGTTACTTTTGCTAAGAATGACCCACGTATCGCTGGCATTGTATGGGCCGGATACCCAGGACAAGCCGGTGGACAAGCCATTGCTGATATTGTGTTTGGAATATCAAATCCAGGAGGAAAGCTGCCTATGACATGGTACCCAGACGAGTATCTTAAAAATTTGGAAATGACAGACATGGGGATGAGGTCAAGGCCATCAAAAGGGTACCCTGGAAGAACCTACAGATTCTACAAAGGGCCAATAGTATACCCATTTGGACATGGATTGGGTTACACTAAATTTGTGCAAACCGTAGCGAGCGCCCCCACTGTAGTTGCAATCGTTCTTGATGGTCACCATACTGAGACTAGTACTAGTGCGGGTAACGGTACTAGTACTAGGTCATTCACAACTGCCGGGAAGGCAATTCGCGTGACACATGCGAAATGCAGCAAGCTTTCGCTCGTTGTCGATGTGGATGTGAGAAATGTGGGCAACAGAGACGGGTCTCACACTTTGCTAGTGTACTCAAGCCCTCCAGCCGCTGCCGGACACTGGGTGCCACACAAACAATTGGTTGCCTTTGAGAAAGTACATGTCCTGGCAAGGACTCAACAGCGAGTCCGATTCAACATTCATGTGTGCAAGCACCTTAGTGTGGTGGACAGGTCTGGGATTCGAAGAATTCCGATGGGACGGCACGACCTCCACATTGGTGATCATGTCGTCCACTCTTTCTCCGTCCAAGCCGCTTCACTGGGGTTGGGGGTCATCAAATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0009505 GO:0030312 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

792

Amino Acids

85.1

Weight (kDa)

8.76

Isoelectric Point (pI)

30.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	112 - 327	9.9e-37	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	400 - 630	7.1e-51	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	704 - 773	3.3e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02640
fragaria_vesca	FvH4_5g39430 FvH4_5g39430 FvH4_5g39430 FvH4_5g39430
malus_domestica	MD03G1296500.v1.1 MD11G1315900.v1.1
prunus_persica	Prupe.8G270800_v2.0.a1 Prupe.8G270800_v2.0.a1
pyrus_communis	pycom03g23490 pycom11g27580
rosa_chinensis	RchiOBHm_Chr7g0241741
rosa_laevigata	RLG00000000548
rosa_multiflora	Rmu_co8482979.1_g000001 Rmu_sc0010736.1_g000003 Rmu_sc0029163.1_g000002
rosa_roxburghii	Rroxscaffold_3G00218710
rosa_rugosa	Rorug07G0346900
rosa_samantha	Rh7AG501300 Rh7BG472600 Rh7CG517600 Rh7DG486300
rosa_wichuraiana	Rw7G042370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	95
Acc16I	TGCGCA	1 cut(s)	1116
Acc36I	ACCTGC	1 cut(s)	956
Acc65I	GGTACC	2 cut(s)	1752, 1821
AccB1I	GGYRCC	3 cut(s)	1752, 1821, 2155
AccI	GTMKAC	1 cut(s)	1863
AccII	CGCG	4 cut(s)	147, 247, 516, 2028
AclWI	GGATC	4 cut(s)	263, 533, 815, 1117
AcoI	YGGCCR	1 cut(s)	75
AcsI	RAATTY	3 cut(s)	1774, 1895, 2280
AcyI	GRCGYC	1 cut(s)	92
AdeI	CACNNNGTG	1 cut(s)	2155
AflIII	ACRYGT	2 cut(s)	163, 2191
AgsI	TTSAA	4 cut(s)	385, 616, 691, 2227
AhlI	ACTAGT	3 cut(s)	1964, 1970, 1988
AjnI	CCWGG	8 cut(s)	993, 1139, 1364, 1528, 1672, 1726, 1825, 2196
AjuI	GAANNNNNNNTTGG	2 cut(s)	1185, 1217
AleI	CACNNNNGTG	2 cut(s)	2250, 2310
Alw21I	GWGCWC	3 cut(s)	785, 853, 1548
Alw26I	GTCTC	8 cut(s)	90, 301, 492, 1084, 1500, 1955, 2091, 2109
AlwI	GGATC	4 cut(s)	263, 533, 815, 1117
AlwNI	CAGNNNCTG	2 cut(s)	950, 2141
Ama87I	CYCGRG	1 cut(s)	502
ApoI	RAATTY	3 cut(s)	1774, 1895, 2280
ArsI	GACNNNNNNTTYG	2 cut(s)	1403, 1435
Asp718I	GGTACC	2 cut(s)	1752, 1821
AspLEI	GCGC	3 cut(s)	249, 1117, 1919
AsuC2I	CCSGG	4 cut(s)	312, 339, 531, 2014
AsuHPI	GGTGA	9 cut(s)	223, 235, 358, 545, 599, 1154, 1367, 1943, 2324
AsuII	TTCGAA	1 cut(s)	2275
AvaI	CYCGRG	1 cut(s)	502
AvaII	GGWCC	4 cut(s)	178, 308, 1136, 1271
AxyI	CCTNAGG	1 cut(s)	357
BaeI	ACNNNNGTAYC	2 cut(s)	1627, 1660
BanI	GGYRCC	3 cut(s)	1752, 1821, 2155
BanII	GRGCYC	2 cut(s)	465, 1548
Bbv12I	GWGCWC	3 cut(s)	785, 853, 1548
BccI	CCATC	9 cut(s)	413, 501, 752, 860, 1100, 1496, 1819, 1940, 2281
BceAI	ACGGC	6 cut(s)	121, 224, 613, 660, 1550, 2309
BciT130I	CCWGG	8 cut(s)	995, 1141, 1366, 1530, 1674, 1728, 1827, 2198
BciVI	GTATCC	2 cut(s)	815, 1661
BclI	TGATCA	2 cut(s)	1045, 2314
BcnI	CCSGG	4 cut(s)	312, 339, 531, 2014
BcoDI	GTCTC	8 cut(s)	90, 301, 492, 1084, 1500, 1955, 2091, 2109
BcuI	ACTAGT	3 cut(s)	1964, 1970, 1988
BfaI	CTAG	7 cut(s)	63, 696, 1965, 1971, 1989, 1995, 2117
BfmI	CTRYAG	4 cut(s)	1150, 1257, 1837, 1926
BfoI	RGCGCY	1 cut(s)	1920
BfuAI	ACCTGC	1 cut(s)	956
BfuI	GTATCC	2 cut(s)	815, 1661
BglI	GCCNNNNNGGC	1 cut(s)	2018
BmcAI	AGTACT	2 cut(s)	1969, 1993
Bme18I	GGWCC	4 cut(s)	178, 308, 1136, 1271
BmeT110I	CYCGRG	1 cut(s)	502
BmrI	ACTGGG	4 cut(s)	1103, 1604, 2161, 2363
BmsI	GCATC	5 cut(s)	1003, 1126, 1426, 1444, 1574
BmuI	ACTGGG	4 cut(s)	1103, 1604, 2161, 2363
BpmI	CTGGAG	1 cut(s)	2118
Bpu14I	TTCGAA	1 cut(s)	2275
BpuEI	CTTGAG	3 cut(s)	818, 1193, 2110
BpuMI	CCSGG	4 cut(s)	312, 339, 531, 2014
Bsa29I	ATCGAT	1 cut(s)	679
BsaAI	YACGTR	3 cut(s)	468, 848, 1643
BsaBI	GATNNNNATC	1 cut(s)	825
BsaHI	GRCGYC	1 cut(s)	92
BsaI	GGTCTC	4 cut(s)	301, 492, 1500, 2109
BsaWI	WCCGGW	1 cut(s)	541
BsaXI	ACNNNNNCTCC	2 cut(s)	2318, 2348
Bse118I	RCCGGY	3 cut(s)	77, 1313, 1682
Bse1I	ACTGG	6 cut(s)	668, 1098, 1483, 1610, 2156, 2358
Bse21I	CCTNAGG	1 cut(s)	357
Bse3DI	GCAATG	2 cut(s)	444, 1695
Bse8I	GATNNNNATC	1 cut(s)	825
BseBI	CCWGG	8 cut(s)	995, 1141, 1366, 1530, 1674, 1728, 1827, 2198
BseCI	ATCGAT	1 cut(s)	679
BseGI	GGATG	8 cut(s)	45, 750, 1018, 1117, 1150, 1565, 1803, 2080
BseJI	GATNNNNATC	1 cut(s)	825
BseMI	GCAATG	2 cut(s)	444, 1695
BseMII	CTCAG	4 cut(s)	371, 508, 999, 1950
BseNI	ACTGG	6 cut(s)	668, 1098, 1483, 1610, 2156, 2358
BseRI	GAGGAG	1 cut(s)	821
BseX3I	CGGCCG	1 cut(s)	75
BseYI	CCCAGC	1 cut(s)	1156
BsgI	GTGCAG	2 cut(s)	837, 1446
Bsh1236I	CGCG	4 cut(s)	147, 247, 516, 2028
Bsh1285I	CGRYCG	2 cut(s)	78, 679
BshNI	GGYRCC	3 cut(s)	1752, 1821, 2155
BshVI	ATCGAT	1 cut(s)	679
BsiEI	CGRYCG	2 cut(s)	78, 679
BsiHKAI	GWGCWC	3 cut(s)	785, 853, 1548
BsiHKCI	CYCGRG	1 cut(s)	502
BslFI	GGGAC	5 cut(s)	191, 294, 1122, 1257, 2304
BsmAI	GTCTC	8 cut(s)	90, 301, 492, 1084, 1500, 1955, 2091, 2109
BsmBI	CGTCTC	1 cut(s)	2091
BsmFI	GGGAC	5 cut(s)	191, 294, 1122, 1257, 2304
Bso31I	GGTCTC	4 cut(s)	301, 492, 1500, 2109
BsoBI	CYCGRG	1 cut(s)	502
Bsp119I	TTCGAA	1 cut(s)	2275
Bsp1286I	GDGCHC	4 cut(s)	465, 785, 853, 1548
Bsp143I	GATC	9 cut(s)	183, 255, 538, 676, 820, 1045, 1109, 1299, 2314
Bsp19I	CCATGG	1 cut(s)	18
BspCNI	CTCAG	4 cut(s)	370, 507, 1000, 1951
BspDI	ATCGAT	1 cut(s)	679
BspFNI	CGCG	4 cut(s)	147, 247, 516, 2028
BspMAI	CTGCAG	1 cut(s)	1154
BspMI	ACCTGC	1 cut(s)	956
BspPI	GGATC	4 cut(s)	263, 533, 815, 1117
BspQI	GCTCTTC	1 cut(s)	1228
BspT104I	TTCGAA	1 cut(s)	2275
BspT107I	GGYRCC	3 cut(s)	1752, 1821, 2155
BspTNI	GGTCTC	4 cut(s)	301, 492, 1500, 2109
BsrDI	GCAATG	2 cut(s)	444, 1695
BsrFI	RCCGGY	3 cut(s)	77, 1313, 1682
BsrI	ACTGG	6 cut(s)	668, 1098, 1483, 1610, 2156, 2358
BssAI	RCCGGY	3 cut(s)	77, 1313, 1682
BssMI	GATC	9 cut(s)	183, 255, 538, 676, 820, 1045, 1109, 1299, 2314
BssNAI	GTATAC	1 cut(s)	1864
BssNI	GRCGYC	1 cut(s)	92
BssT1I	CCWWGG	5 cut(s)	18, 126, 234, 250, 1192
Bst1107I	GTATAC	1 cut(s)	1864
Bst2UI	CCWGG	8 cut(s)	995, 1141, 1366, 1530, 1674, 1728, 1827, 2198
Bst6I	CTCTTC	2 cut(s)	47, 1228
BstACI	GRCGYC	1 cut(s)	92
BstAPI	GCANNNNNTGC	2 cut(s)	563, 950
BstBAI	YACGTR	3 cut(s)	468, 848, 1643
BstBI	TTCGAA	1 cut(s)	2275
BstDEI	CTNAG	6 cut(s)	357, 494, 1008, 1629, 1959, 2249
BstDSI	CCRYGG	3 cut(s)	18, 514, 1216
BstEII	GGTNACC	2 cut(s)	605, 1949
BstF5I	GGATG	8 cut(s)	45, 750, 1018, 1117, 1150, 1565, 1803, 2080
BstFNI	CGCG	4 cut(s)	147, 247, 516, 2028
BstH2I	RGCGCY	1 cut(s)	1920
BstHHI	GCGC	3 cut(s)	249, 1117, 1919
BstKTI	GATC	9 cut(s)	186, 258, 541, 679, 823, 1048, 1112, 1302, 2317
BstMAI	GTCTC	8 cut(s)	90, 301, 492, 1084, 1500, 1955, 2091, 2109
BstMBI	GATC	9 cut(s)	183, 255, 538, 676, 820, 1045, 1109, 1299, 2314
BstMCI	CGRYCG	2 cut(s)	78, 679
BstNI	CCWGG	8 cut(s)	995, 1141, 1366, 1530, 1674, 1728, 1827, 2198
BstNSI	RCATGY	4 cut(s)	167, 1102, 2039, 2195
BstPI	GGTNACC	2 cut(s)	605, 1949
BstSFI	CTRYAG	4 cut(s)	1150, 1257, 1837, 1926
BstUI	CGCG	4 cut(s)	147, 247, 516, 2028
BstX2I	RGATCY	3 cut(s)	538, 820, 1109
BstXI	CCANNNNNNTGG	1 cut(s)	19
BstYI	RGATCY	3 cut(s)	538, 820, 1109
BstZ17I	GTATAC	1 cut(s)	1864
BstZI	CGGCCG	1 cut(s)	75
Bsu15I	ATCGAT	1 cut(s)	679
Bsu36I	CCTNAGG	1 cut(s)	357
BsuI	GTATCC	2 cut(s)	815, 1661
BsuTUI	ATCGAT	1 cut(s)	679
BtgI	CCRYGG	3 cut(s)	18, 514, 1216
BtgZI	GCGATG	1 cut(s)	1407
BtsCI	GGATG	8 cut(s)	45, 750, 1018, 1117, 1150, 1565, 1803, 2080
BtsI	GCAGTG	2 cut(s)	228, 1023
BtsIMutI	CAGTG	8 cut(s)	228, 900, 1005, 1023, 1254, 1923, 2149, 2351
BveI	ACCTGC	1 cut(s)	956
CaiI	CAGNNNCTG	2 cut(s)	950, 2141
CfoI	GCGC	3 cut(s)	249, 1117, 1919
Cfr10I	RCCGGY	3 cut(s)	77, 1313, 1682
Cfr42I	CCGCGG	1 cut(s)	517
ClaI	ATCGAT	1 cut(s)	679
CseI	GACGC	3 cut(s)	125, 739, 1190
CspCI	CAANNNNNGTGG	4 cut(s)	1198, 1233, 1912, 1947
DdeI	CTNAG	6 cut(s)	357, 494, 1008, 1629, 1959, 2249
DpnI	GATC	9 cut(s)	185, 257, 540, 678, 822, 1047, 1111, 1301, 2316
DpnII	GATC	9 cut(s)	183, 255, 538, 676, 820, 1045, 1109, 1299, 2314
DraIII	CACNNNGTG	1 cut(s)	2155
EaeI	YGGCCR	1 cut(s)	75
EagI	CGGCCG	1 cut(s)	75
Eam1104I	CTCTTC	2 cut(s)	47, 1228
EarI	CTCTTC	2 cut(s)	47, 1228
EciI	GGCGGA	1 cut(s)	1511
Ecl136II	GAGCTC	1 cut(s)	1546
EclXI	CGGCCG	1 cut(s)	75
Eco130I	CCWWGG	5 cut(s)	18, 126, 234, 250, 1192
Eco24I	GRGCYC	2 cut(s)	465, 1548
Eco31I	GGTCTC	4 cut(s)	301, 492, 1500, 2109
Eco47I	GGWCC	4 cut(s)	178, 308, 1136, 1271
Eco52I	CGGCCG	1 cut(s)	75
Eco53kI	GAGCTC	1 cut(s)	1546
Eco81I	CCTNAGG	1 cut(s)	357
Eco88I	CYCGRG	1 cut(s)	502
Eco91I	GGTNACC	2 cut(s)	605, 1949
EcoICRI	GAGCTC	1 cut(s)	1546
EcoO109I	RGGNCCY	3 cut(s)	178, 308, 1136
EcoO65I	GGTNACC	2 cut(s)	605, 1949
EcoRI	GAATTC	1 cut(s)	2280
EcoRII	CCWGG	8 cut(s)	993, 1139, 1364, 1528, 1672, 1726, 1825, 2196
EcoT14I	CCWWGG	5 cut(s)	18, 126, 234, 250, 1192
EcoT38I	GRGCYC	2 cut(s)	465, 1548
ErhI	CCWWGG	5 cut(s)	18, 126, 234, 250, 1192
Esp3I	CGTCTC	1 cut(s)	2091
FaqI	GGGAC	5 cut(s)	191, 294, 1122, 1257, 2304
FauI	CCCGC	4 cut(s)	320, 452, 1250, 1969
FauNDI	CATATG	1 cut(s)	559
FbaI	TGATCA	2 cut(s)	1045, 2314
FblI	GTMKAC	1 cut(s)	1863
FokI	GGATG	8 cut(s)	32, 757, 1025, 1104, 1157, 1552, 1810, 2087
FriOI	GRGCYC	2 cut(s)	465, 1548
FspBI	CTAG	7 cut(s)	63, 696, 1965, 1971, 1989, 1995, 2117
FspI	TGCGCA	1 cut(s)	1116
GlaI	GCGC	3 cut(s)	248, 1116, 1918
GsaI	CCCAGC	1 cut(s)	1160
GsuI	CTGGAG	1 cut(s)	2118
HaeII	RGCGCY	1 cut(s)	1920
HgaI	GACGC	3 cut(s)	125, 739, 1190
HhaI	GCGC	3 cut(s)	249, 1117, 1919
Hin1I	GRCGYC	1 cut(s)	92
Hin6I	GCGC	3 cut(s)	247, 1115, 1917
HinP1I	GCGC	3 cut(s)	247, 1115, 1917
HindIII	AAGCTT	1 cut(s)	2051
HphI	GGTGA	9 cut(s)	223, 235, 358, 545, 599, 1154, 1367, 1943, 2324
Hpy188III	TCNNGA	7 cut(s)	742, 835, 1178, 1210, 1594, 1943, 2376
Hpy99I	CGWCG	3 cut(s)	94, 119, 734
HpyAV	CCTTC	6 cut(s)	183, 202, 391, 610, 1018, 2011
HpyCH4IV	ACGT	8 cut(s)	92, 197, 467, 489, 573, 732, 847, 1642
HpyF3I	CTNAG	6 cut(s)	357, 494, 1008, 1629, 1959, 2249
HpySE526I	ACGT	8 cut(s)	92, 197, 467, 489, 573, 732, 847, 1642
Hsp92I	GRCGYC	1 cut(s)	92
HspAI	GCGC	3 cut(s)	247, 1115, 1917
KflI	GGGWCCC	1 cut(s)	308
KpnI	GGTACC	2 cut(s)	1756, 1825
KroI	GCCGGC	1 cut(s)	77
KroNI	GCCGGC	1 cut(s)	79
Ksp22I	TGATCA	2 cut(s)	1045, 2314
KspI	CCGCGG	1 cut(s)	517
Kzo9I	GATC	9 cut(s)	183, 255, 538, 676, 820, 1045, 1109, 1299, 2314
LguI	GCTCTTC	1 cut(s)	1228
LmnI	GCTCC	2 cut(s)	341, 554
LweI	GCATC	5 cut(s)	1003, 1126, 1426, 1444, 1574
MaeI	CTAG	7 cut(s)	63, 696, 1965, 1971, 1989, 1995, 2117
MaeII	ACGT	8 cut(s)	92, 197, 467, 489, 573, 732, 847, 1642
MaeIII	GTNAC	9 cut(s)	605, 1285, 1291, 1304, 1618, 1886, 1949, 1979, 2029
MalI	GATC	9 cut(s)	185, 257, 540, 678, 822, 1047, 1111, 1301, 2316
MboI	GATC	9 cut(s)	183, 255, 538, 676, 820, 1045, 1109, 1299, 2314
MboII	GAAGA	8 cut(s)	34, 548, 950, 1033, 1196, 1215, 1842, 2289
MfeI	CAATTG	1 cut(s)	2168
MflI	RGATCY	3 cut(s)	538, 820, 1109
MhlI	GDGCHC	4 cut(s)	465, 785, 853, 1548
MluCI	AATT	7 cut(s)	1129, 1276, 1774, 1895, 2022, 2168, 2280
MlyI	GAGTC	6 cut(s)	92, 484, 681, 1521, 2200, 2226
MmeI	TCCRAC	3 cut(s)	113, 258, 532
MroNI	GCCGGC	1 cut(s)	77
MseI	TTAA	1 cut(s)	1770
MslI	CAYNNNNRTG	6 cut(s)	17, 1122, 1796, 2234, 2250, 2310
MspA1I	CMGCKG	4 cut(s)	374, 516, 947, 2141
MunI	CAATTG	1 cut(s)	2168
MvaI	CCWGG	8 cut(s)	995, 1141, 1366, 1530, 1674, 1728, 1827, 2198
MvnI	CGCG	4 cut(s)	147, 247, 516, 2028
NaeI	GCCGGC	1 cut(s)	79
NciI	CCSGG	4 cut(s)	312, 339, 531, 2014
NcoI	CCATGG	1 cut(s)	18
NdeI	CATATG	1 cut(s)	559
NdeII	GATC	9 cut(s)	183, 255, 538, 676, 820, 1045, 1109, 1299, 2314
NgoMIV	GCCGGC	1 cut(s)	77
NmuCI	GTSAC	3 cut(s)	605, 1949, 2029
NsbI	TGCGCA	1 cut(s)	1116
NspI	RCATGY	4 cut(s)	167, 1102, 2039, 2195
NspV	TTCGAA	1 cut(s)	2275
OliI	CACNNNNGTG	2 cut(s)	2250, 2310
PasI	CCCWGGG	1 cut(s)	1140
PciI	ACATGT	2 cut(s)	163, 2191
PciSI	GCTCTTC	1 cut(s)	1228
PdiI	GCCGGC	1 cut(s)	79
PfeI	GAWTC	4 cut(s)	890, 1842, 2223, 2272
PflFI	GACNNNGTC	1 cut(s)	1511
PfoI	TCCNGGA	3 cut(s)	310, 337, 1726
Ple19I	CGATCG	1 cut(s)	679
PleI	GAGTC	6 cut(s)	91, 483, 680, 1520, 2200, 2225
PpsI	GAGTC	6 cut(s)	91, 483, 680, 1520, 2200, 2225
Ppu21I	YACGTR	3 cut(s)	468, 848, 1643
PpuMI	RGGWCCY	3 cut(s)	178, 308, 1136
PscI	ACATGT	2 cut(s)	163, 2191
Psp124BI	GAGCTC	1 cut(s)	1548
Psp5II	RGGWCCY	3 cut(s)	178, 308, 1136
Psp6I	CCWGG	8 cut(s)	993, 1139, 1364, 1528, 1672, 1726, 1825, 2196
PspEI	GGTNACC	2 cut(s)	605, 1949
PspFI	CCCAGC	1 cut(s)	1156
PspGI	CCWGG	8 cut(s)	993, 1139, 1364, 1528, 1672, 1726, 1825, 2196
PspPPI	RGGWCCY	3 cut(s)	178, 308, 1136
PstI	CTGCAG	1 cut(s)	1154
PstNI	CAGNNNCTG	2 cut(s)	950, 2141
PsuI	RGATCY	3 cut(s)	538, 820, 1109
PsyI	GACNNNGTC	1 cut(s)	1511
PvuI	CGATCG	1 cut(s)	679
PvuII	CAGCTG	1 cut(s)	947
RseI	CAYNNNNRTG	6 cut(s)	17, 1122, 1796, 2234, 2250, 2310
SacI	GAGCTC	1 cut(s)	1548
SacII	CCGCGG	1 cut(s)	517
SapI	GCTCTTC	1 cut(s)	1228
SaqAI	TTAA	1 cut(s)	1770
Sau3AI	GATC	9 cut(s)	183, 255, 538, 676, 820, 1045, 1109, 1299, 2314
ScaI	AGTACT	2 cut(s)	1969, 1993
SchI	GAGTC	6 cut(s)	92, 484, 681, 1521, 2200, 2226
SduI	GDGCHC	4 cut(s)	465, 785, 853, 1548
SfaNI	GCATC	5 cut(s)	1003, 1126, 1426, 1444, 1574
SfcI	CTRYAG	4 cut(s)	1150, 1257, 1837, 1926
Sfr303I	CCGCGG	1 cut(s)	517
SfuI	TTCGAA	1 cut(s)	2275
SgrBI	CCGCGG	1 cut(s)	517
SinI	GGWCC	4 cut(s)	178, 308, 1136, 1271
SmiMI	CAYNNNNRTG	6 cut(s)	17, 1122, 1796, 2234, 2250, 2310
SmlI	CTYRAG	3 cut(s)	833, 1208, 2125
SmoI	CTYRAG	3 cut(s)	833, 1208, 2125
SpeI	ACTAGT	3 cut(s)	1964, 1970, 1988
Sse9I	AATT	7 cut(s)	1129, 1276, 1774, 1895, 2022, 2168, 2280
SspMI	CTAG	7 cut(s)	63, 696, 1965, 1971, 1989, 1995, 2117
SstI	GAGCTC	1 cut(s)	1548
StyI	CCWWGG	5 cut(s)	18, 126, 234, 250, 1192
TaiI	ACGT	8 cut(s)	95, 200, 470, 492, 576, 735, 850, 1645
TaqI	TCGA	8 cut(s)	675, 679, 729, 1053, 1479, 1491, 2067, 2275
TaqII	GACCGA	1 cut(s)	1524
TasI	AATT	7 cut(s)	1129, 1276, 1774, 1895, 2022, 2168, 2280
TatI	WGTACW	4 cut(s)	1967, 1991, 2121, 2188
TauI	GCSGC	9 cut(s)	77, 147, 247, 516, 603, 1248, 1608, 2141, 2348
TfiI	GAWTC	4 cut(s)	890, 1842, 2223, 2272
Tru1I	TTAA	1 cut(s)	1770
Tru9I	TTAA	1 cut(s)	1770
TscAI	CASTG	8 cut(s)	235, 900, 1012, 1023, 1261, 1930, 2156, 2358
TseFI	GTSAC	3 cut(s)	605, 1949, 2029
Tsp45I	GTSAC	3 cut(s)	605, 1949, 2029
TspDTI	ATGAA	4 cut(s)	34, 278, 282, 2222
TspGWI	ACGGA	1 cut(s)	2326
TspRI	CASTG	8 cut(s)	235, 900, 1012, 1023, 1261, 1930, 2156, 2358
Tth111I	GACNNNGTC	1 cut(s)	1511
VpaK11BI	GGWCC	4 cut(s)	178, 308, 1136, 1271
XapI	RAATTY	3 cut(s)	1774, 1895, 2280
XceI	RCATGY	4 cut(s)	167, 1102, 2039, 2195
XcmI	CCANNNNNNNNNTGG	2 cut(s)	16, 1468
XmiI	GTMKAC	1 cut(s)	1863
XspI	CTAG	7 cut(s)	63, 696, 1965, 1971, 1989, 1995, 2117
ZraI	GACGTC	1 cut(s)	93
ZrmI	AGTACT	2 cut(s)	1969, 1993

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.