Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0008307

Physical Location & Seq

Genomic Coordinates Reverse (-)

1004516 .. 1009569

Gene Structure 5054 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00218710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

ATGGCTTCCACCACCACCACCACCACCATGGCCTCCCTCTGCCTTTTCCTCCTCTTCATCCTTTTGCAAACAACTGGCAGCAAAGCGGCCGGCGAGTCTCCGACGTCATTCGCTTGCAACCCGCAAGACGCAAGCACCAAGGACTTGCCGTTTTGCCGCGTAAAGTTGCCGATACATGTGAGAGTGAGGGACCTGATCGGAAGGCTGACGTTGCAAGAGAAGGTGAAGCTGCTGGTGAACACTGCCAAGGCCGTGCCGCGCCTTGGGATCAAAGACTATGAATGGTGGTCGGAGGCACTTCATGGGGTCTCCAATGTGGGTCCCGGAACCAAGTTTGGCGGGGAGTTTCCGGGAGCCACCAGCTTCCCTCAGGTCATCACCACCGCTGCTTCCTTCAATGCTTCTCTGTGGGAAGCCATCGGACGGGTTGTGTCAGACGAAGCAAGAGCAATGTATAATGGAGGTATGGGCGGGCTCACGTATTGGAGTCCAAATGTGAACGTACTCAGAGACCCGAGATGGGGCCGTGGACAGGAGACTCCCGGCGAAGATCCGGTGGTGGTCGGAGCATATGCTGCCAGCTACGTCAGGGGTTTACAGGGCAATGACGGTGGCGGTCACCAGTTGAAGGTGGCTGCTTGCTGTAAACACTTCACGGCTTACGACCTTGATAACTGGCATGGAGTCGATCGATTTCACTTCAACGCTAGGGTTAGCAAGCAGGACATGGAGGACACATTCGACGTTCCTTTCAGGATGTGCGTCCAAGATGGAAAGGTGGCGAGTGTTATGTGCTCTTACAATCAGGTCAATGGTGTCCCAACCTGTGCAGATCCTAATCTCCTCAAGAAAACTGTACGTGCTCAATGGGGGCTTGATGGCTACATTGTCTCTGATTGCGATTCAGTGGGCGTTTTCTATGACAACCAACACTACACGTCAACACCAGAAGAAGCAGCTGCTGCTGCCCTCAAAGCAGGTTTGGATTTAGACTGTGGCCCATTCCTGGGGTTGCACACTGAGGATGCAGTGAAGAAGGGTTTGTTGAGTGAGGTTGATCATATCGATCTTGCTTTGGCTAATACACTCACAGTCCAAATGAGACTGGGCATGTTTGATGGATCTGCGCATCCATATGCTAATTTAGGTCCCAGGGATGTCTGCAGCCCAGCTCACCAGCAACTCGCTCTTGACGCTGCCACCCAAGGCATTGTTCTTCTCAAGAACCGTGGCCCTTCCCTGCCTTTATCCACCCGCCGCCACCGCAGTGTAGCTGTCATTGGTCCCAATTCTGATGTTACTGTTACTATGATCGGTAACTATGCCGGTGTTGCTTGTGGGTACACTACACCCCTACAAGGAATAGGAAAATACACCAGGACAGTTCACCAGCAGGGTTGCAGCGATGTAGCTTGCAAAGACGACACATTGTTTGGTGCAGCCATTGATGCAGCTCGTCAAGCCGATGCGACCATTTTAGTAATGGGCCTTGACCAGTCCATCGAGGCGGAGTTCAGAGACCGAGTCGGGCTACTTTTACCTGGACGGCAACAAGAGCTCATATCTAAAGTTGCTGCATCCGCTAAAGGCCCAACCATTCTGGTCTTGATGTCTGGCGGCCCAGTTGATGTTACTTTTGCCAAGAATGACCCGCGTATCGCTGGCATTGTATGGGCCGGATACCCAGGACAAGCTGGTGGACAAGCCATTGCTGATATTGTGTTTGGAATATCAAATCCAGGAGGAAAGCTGCCTATGACATGGTACCCAGACGAGTATCTTAGAAATTTGGAAATGACAGACATGGGGATGAGGTCAAGGCCATCAAAAGGGTACCCTGGAAGAACCTACAGATTCTACGAAGGGCCAATAGTATACCCATTTGGACATGGATTGGGTTACACTAAATTTGTGCAAACCGTAGCGAGCGCCCCCACTGTAGTTGCAATCGTTCTTGATGGTCACCATATTGAGACTAGTACTAGTGCCGGTAACGGTACTAGTACTAGGTCATTCGCAACTGCCGGGAAGGCAATTCGCGTGACACATGCGAAATGCAGCAAGCTTTCGCTCGTTGTCGATGTGGATGTGAGAAATGTGGGCAACAGAGACGGGTCTCACACTTTGCTAGTGTACTCGAGCCCTCCAGCTGCTGCCGGACACTGGGTGCCACACAAACAATTGGTTGCCTTTGAGAAAGTACATGTCCTGGCAAGGACTCAACAGCGAGTCCGATTCAACATTCATGTGTGCAAGCACCTTAGTGTGGTGGACAGGTCTGGGATTCGAAGAATTCCGATGGGACGGCACGACCTCCACATTGGTGATCATGTCGTCCACTCTTTCTCTGTCCAAGCCTCTTCATTGGGGTTGGGAATCATCAAATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0009505 GO:0030312 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

796

Amino Acids

85.61

Weight (kDa)

8.46

Isoelectric Point (pI)

32.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	116 - 331	4.2e-37	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	404 - 634	1.4e-50	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	708 - 777	3.3e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02640
fragaria_vesca	FvH4_5g39430 FvH4_5g39430 FvH4_5g39430 FvH4_5g39430
malus_domestica	MD03G1296500.v1.1 MD11G1315900.v1.1
prunus_persica	Prupe.8G270800_v2.0.a1 Prupe.8G270800_v2.0.a1
pyrus_communis	pycom03g23490 pycom11g27580
rosa_chinensis	RchiOBHm_Chr7g0241741
rosa_laevigata	RLG00000000548
rosa_multiflora	Rmu_co8482979.1_g000001 Rmu_sc0010736.1_g000003 Rmu_sc0029163.1_g000002
rosa_roxburghii	Rroxscaffold_3G00218710
rosa_rugosa	Rorug07G0346900
rosa_samantha	Rh7AG501300 Rh7BG472600 Rh7CG517600 Rh7DG486300
rosa_wichuraiana	Rw7G042370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	107
Acc16I	TGCGCA	1 cut(s)	1128
Acc36I	ACCTGC	1 cut(s)	968
Acc65I	GGTACC	2 cut(s)	1764, 1833
AccB1I	GGYRCC	3 cut(s)	1764, 1833, 2167
AccI	GTMKAC	1 cut(s)	1875
AccII	CGCG	4 cut(s)	159, 259, 1654, 2040
AclWI	GGATC	4 cut(s)	275, 545, 827, 1129
AcoI	YGGCCR	1 cut(s)	87
AcsI	RAATTY	3 cut(s)	1786, 1907, 2292
AcyI	GRCGYC	1 cut(s)	104
AdeI	CACNNNGTG	1 cut(s)	2167
AflIII	ACRYGT	3 cut(s)	175, 936, 2203
AgsI	TTSAA	4 cut(s)	397, 628, 703, 2239
AhlI	ACTAGT	3 cut(s)	1976, 1982, 2000
AjiI	CACGTC	1 cut(s)	939
AjnI	CCWGG	8 cut(s)	1005, 1151, 1376, 1540, 1684, 1738, 1837, 2208
AjuI	GAANNNNNNNTTGG	2 cut(s)	1197, 1229
AleI	CACNNNNGTG	3 cut(s)	1266, 2262, 2322
Alw21I	GWGCWC	3 cut(s)	797, 865, 1560
AlwI	GGATC	4 cut(s)	275, 545, 827, 1129
AlwNI	CAGNNNCTG	2 cut(s)	962, 2153
Ama87I	CYCGRG	2 cut(s)	514, 2137
ApoI	RAATTY	3 cut(s)	1786, 1907, 2292
ArsI	GACNNNNNNTTYG	2 cut(s)	1415, 1447
Asp718I	GGTACC	2 cut(s)	1764, 1833
AspLEI	GCGC	3 cut(s)	261, 1129, 1931
AsuC2I	CCSGG	4 cut(s)	324, 351, 543, 2026
AsuHPI	GGTGA	8 cut(s)	235, 247, 370, 611, 1166, 1379, 1955, 2336
AsuII	TTCGAA	1 cut(s)	2287
AvaI	CYCGRG	2 cut(s)	514, 2137
AvaII	GGWCC	4 cut(s)	190, 320, 1148, 1283
AxyI	CCTNAGG	1 cut(s)	369
BaeI	ACNNNNGTAYC	2 cut(s)	1639, 1672
BanI	GGYRCC	3 cut(s)	1764, 1833, 2167
BanII	GRGCYC	3 cut(s)	477, 1560, 2144
Bbv12I	GWGCWC	3 cut(s)	797, 865, 1560
BccI	CCATC	9 cut(s)	425, 513, 764, 872, 1112, 1508, 1831, 1952, 2293
BceAI	ACGGC	6 cut(s)	133, 236, 510, 672, 1562, 2321
BciT130I	CCWGG	8 cut(s)	1007, 1153, 1378, 1542, 1686, 1740, 1839, 2210
BciVI	GTATCC	1 cut(s)	1673
BclI	TGATCA	2 cut(s)	1057, 2326
BcnI	CCSGG	4 cut(s)	324, 351, 543, 2026
BcuI	ACTAGT	3 cut(s)	1976, 1982, 2000
BfaI	CTAG	6 cut(s)	708, 1977, 1983, 2001, 2007, 2129
BfmI	CTRYAG	3 cut(s)	1162, 1849, 1938
BfoI	RGCGCY	1 cut(s)	1932
BfuAI	ACCTGC	1 cut(s)	968
BfuI	GTATCC	1 cut(s)	1673
BglI	GCCNNNNNGGC	1 cut(s)	2030
BmcAI	AGTACT	2 cut(s)	1981, 2005
Bme18I	GGWCC	4 cut(s)	190, 320, 1148, 1283
BmeT110I	CYCGRG	2 cut(s)	514, 2137
BmgBI	CACGTC	1 cut(s)	939
BmrI	ACTGGG	3 cut(s)	1115, 1616, 2173
BmsI	GCATC	5 cut(s)	1015, 1138, 1438, 1456, 1586
BmuI	ACTGGG	3 cut(s)	1115, 1616, 2173
BpmI	CTGGAG	1 cut(s)	2130
Bpu14I	TTCGAA	1 cut(s)	2287
BpuEI	CTTGAG	2 cut(s)	830, 1205
BpuMI	CCSGG	4 cut(s)	324, 351, 543, 2026
Bsa29I	ATCGAT	2 cut(s)	691, 1065
BsaAI	YACGTR	2 cut(s)	480, 860
BsaBI	GATNNNNATC	1 cut(s)	837
BsaHI	GRCGYC	1 cut(s)	104
BsaI	GGTCTC	4 cut(s)	313, 504, 1512, 2121
BsaWI	WCCGGW	1 cut(s)	553
Bse118I	RCCGGY	3 cut(s)	89, 1325, 1988
Bse1I	ACTGG	7 cut(s)	79, 622, 680, 1110, 1495, 1622, 2168
Bse21I	CCTNAGG	1 cut(s)	369
Bse3DI	GCAATG	3 cut(s)	456, 610, 1707
Bse8I	GATNNNNATC	1 cut(s)	837
BseBI	CCWGG	8 cut(s)	1007, 1153, 1378, 1542, 1686, 1740, 1839, 2210
BseCI	ATCGAT	2 cut(s)	691, 1065
BseGI	GGATG	8 cut(s)	57, 762, 1030, 1129, 1162, 1577, 1815, 2092
BseJI	GATNNNNATC	1 cut(s)	837
BseMI	GCAATG	3 cut(s)	456, 610, 1707
BseMII	CTCAG	3 cut(s)	383, 520, 1011
BseNI	ACTGG	7 cut(s)	79, 622, 680, 1110, 1495, 1622, 2168
BseRI	GAGGAG	2 cut(s)	41, 833
BseX3I	CGGCCG	1 cut(s)	87
BseYI	CCCAGC	1 cut(s)	1168
BsgI	GTGCAG	2 cut(s)	849, 1458
Bsh1236I	CGCG	4 cut(s)	159, 259, 1654, 2040
Bsh1285I	CGRYCG	2 cut(s)	90, 691
BshNI	GGYRCC	3 cut(s)	1764, 1833, 2167
BshVI	ATCGAT	2 cut(s)	691, 1065
BsiEI	CGRYCG	2 cut(s)	90, 691
BsiHKAI	GWGCWC	3 cut(s)	797, 865, 1560
BsiHKCI	CYCGRG	2 cut(s)	514, 2137
BslFI	GGGAC	6 cut(s)	203, 306, 803, 1134, 1269, 2316
BsmBI	CGTCTC	1 cut(s)	2103
BsmFI	GGGAC	6 cut(s)	203, 306, 803, 1134, 1269, 2316
Bso31I	GGTCTC	4 cut(s)	313, 504, 1512, 2121
BsoBI	CYCGRG	2 cut(s)	514, 2137
Bsp119I	TTCGAA	1 cut(s)	2287
Bsp1286I	GDGCHC	5 cut(s)	477, 797, 865, 1560, 2144
Bsp19I	CCATGG	1 cut(s)	27
BspCNI	CTCAG	3 cut(s)	382, 519, 1012
BspDI	ATCGAT	2 cut(s)	691, 1065
BspFNI	CGCG	4 cut(s)	159, 259, 1654, 2040
BspMAI	CTGCAG	1 cut(s)	1166
BspMI	ACCTGC	1 cut(s)	968
BspPI	GGATC	4 cut(s)	275, 545, 827, 1129
BspT104I	TTCGAA	1 cut(s)	2287
BspT107I	GGYRCC	3 cut(s)	1764, 1833, 2167
BspTNI	GGTCTC	4 cut(s)	313, 504, 1512, 2121
BsrDI	GCAATG	3 cut(s)	456, 610, 1707
BsrFI	RCCGGY	3 cut(s)	89, 1325, 1988
BsrI	ACTGG	7 cut(s)	79, 622, 680, 1110, 1495, 1622, 2168
BssAI	RCCGGY	3 cut(s)	89, 1325, 1988
BssNAI	GTATAC	1 cut(s)	1876
BssNI	GRCGYC	1 cut(s)	104
BssT1I	CCWWGG	5 cut(s)	27, 138, 246, 262, 1204
Bst1107I	GTATAC	1 cut(s)	1876
Bst2UI	CCWGG	8 cut(s)	1007, 1153, 1378, 1542, 1686, 1740, 1839, 2210
Bst6I	CTCTTC	2 cut(s)	59, 2365
BstACI	GRCGYC	1 cut(s)	104
BstAPI	GCANNNNNTGC	2 cut(s)	575, 962
BstBAI	YACGTR	2 cut(s)	480, 860
BstBI	TTCGAA	1 cut(s)	2287
BstDEI	CTNAG	5 cut(s)	369, 506, 1020, 1781, 2261
BstDSI	CCRYGG	3 cut(s)	27, 526, 1228
BstEII	GGTNACC	2 cut(s)	617, 1961
BstF5I	GGATG	8 cut(s)	57, 762, 1030, 1129, 1162, 1577, 1815, 2092
BstFNI	CGCG	4 cut(s)	159, 259, 1654, 2040
BstH2I	RGCGCY	1 cut(s)	1932
BstHHI	GCGC	3 cut(s)	261, 1129, 1931
BstMCI	CGRYCG	2 cut(s)	90, 691
BstNI	CCWGG	8 cut(s)	1007, 1153, 1378, 1542, 1686, 1740, 1839, 2210
BstNSI	RCATGY	4 cut(s)	179, 1114, 2051, 2207
BstPI	GGTNACC	2 cut(s)	617, 1961
BstSFI	CTRYAG	3 cut(s)	1162, 1849, 1938
BstUI	CGCG	4 cut(s)	159, 259, 1654, 2040
BstX2I	RGATCY	3 cut(s)	550, 832, 1121
BstXI	CCANNNNNNTGG	1 cut(s)	28
BstYI	RGATCY	3 cut(s)	550, 832, 1121
BstZ17I	GTATAC	1 cut(s)	1876
BstZI	CGGCCG	1 cut(s)	87
Bsu15I	ATCGAT	2 cut(s)	691, 1065
Bsu36I	CCTNAGG	1 cut(s)	369
BsuI	GTATCC	1 cut(s)	1673
BsuTUI	ATCGAT	2 cut(s)	691, 1065
BtgI	CCRYGG	3 cut(s)	27, 526, 1228
BtgZI	GCGATG	1 cut(s)	1419
BtrI	CACGTC	1 cut(s)	939
BtsCI	GGATG	8 cut(s)	57, 762, 1030, 1129, 1162, 1577, 1815, 2092
BtsI	GCAGTG	3 cut(s)	240, 1035, 1273
BtsIMutI	CAGTG	7 cut(s)	240, 912, 1017, 1035, 1273, 1935, 2161
BveI	ACCTGC	1 cut(s)	968
CaiI	CAGNNNCTG	2 cut(s)	962, 2153
CfoI	GCGC	3 cut(s)	261, 1129, 1931
Cfr10I	RCCGGY	3 cut(s)	89, 1325, 1988
ClaI	ATCGAT	2 cut(s)	691, 1065
CseI	GACGC	3 cut(s)	137, 751, 1202
CspCI	CAANNNNNGTGG	6 cut(s)	592, 627, 1210, 1245, 1924, 1959
DdeI	CTNAG	5 cut(s)	369, 506, 1020, 1781, 2261
DraIII	CACNNNGTG	1 cut(s)	2167
EaeI	YGGCCR	1 cut(s)	87
EagI	CGGCCG	1 cut(s)	87
Eam1104I	CTCTTC	2 cut(s)	59, 2365
EarI	CTCTTC	2 cut(s)	59, 2365
EciI	GGCGGA	1 cut(s)	1523
Ecl136II	GAGCTC	1 cut(s)	1558
EclXI	CGGCCG	1 cut(s)	87
Eco130I	CCWWGG	5 cut(s)	27, 138, 246, 262, 1204
Eco24I	GRGCYC	3 cut(s)	477, 1560, 2144
Eco31I	GGTCTC	4 cut(s)	313, 504, 1512, 2121
Eco47I	GGWCC	4 cut(s)	190, 320, 1148, 1283
Eco52I	CGGCCG	1 cut(s)	87
Eco53kI	GAGCTC	1 cut(s)	1558
Eco81I	CCTNAGG	1 cut(s)	369
Eco88I	CYCGRG	2 cut(s)	514, 2137
Eco91I	GGTNACC	2 cut(s)	617, 1961
EcoICRI	GAGCTC	1 cut(s)	1558
EcoO109I	RGGNCCY	3 cut(s)	190, 320, 1148
EcoO65I	GGTNACC	2 cut(s)	617, 1961
EcoRI	GAATTC	1 cut(s)	2292
EcoRII	CCWGG	8 cut(s)	1005, 1151, 1376, 1540, 1684, 1738, 1837, 2208
EcoT14I	CCWWGG	5 cut(s)	27, 138, 246, 262, 1204
EcoT38I	GRGCYC	3 cut(s)	477, 1560, 2144
ErhI	CCWWGG	5 cut(s)	27, 138, 246, 262, 1204
Esp3I	CGTCTC	1 cut(s)	2103
FaqI	GGGAC	6 cut(s)	203, 306, 803, 1134, 1269, 2316
FauI	CCCGC	5 cut(s)	129, 332, 464, 1262, 1659
FauNDI	CATATG	2 cut(s)	571, 1135
FbaI	TGATCA	2 cut(s)	1057, 2326
FblI	GTMKAC	1 cut(s)	1875
FokI	GGATG	8 cut(s)	44, 769, 1037, 1116, 1169, 1564, 1822, 2099
FriOI	GRGCYC	3 cut(s)	477, 1560, 2144
FspBI	CTAG	6 cut(s)	708, 1977, 1983, 2001, 2007, 2129
FspI	TGCGCA	1 cut(s)	1128
GlaI	GCGC	3 cut(s)	260, 1128, 1930
GsaI	CCCAGC	1 cut(s)	1172
GsuI	CTGGAG	1 cut(s)	2130
HaeII	RGCGCY	1 cut(s)	1932
HgaI	GACGC	3 cut(s)	137, 751, 1202
HhaI	GCGC	3 cut(s)	261, 1129, 1931
Hin1I	GRCGYC	1 cut(s)	104
Hin6I	GCGC	3 cut(s)	259, 1127, 1929
HinP1I	GCGC	3 cut(s)	259, 1127, 1929
HincII	GTYRAC	1 cut(s)	942
HindII	GTYRAC	1 cut(s)	942
HindIII	AAGCTT	1 cut(s)	2063
HphI	GGTGA	8 cut(s)	235, 247, 370, 611, 1166, 1379, 1955, 2336
Hpy188III	TCNNGA	7 cut(s)	754, 847, 1190, 1222, 1606, 1955, 2388
Hpy99I	CGWCG	2 cut(s)	106, 746
HpyAV	CCTTC	8 cut(s)	195, 214, 403, 622, 1030, 1245, 1856, 2023
HpyCH4IV	ACGT	8 cut(s)	104, 209, 479, 501, 585, 744, 859, 938
HpyF3I	CTNAG	5 cut(s)	369, 506, 1020, 1781, 2261
HpySE526I	ACGT	8 cut(s)	104, 209, 479, 501, 585, 744, 859, 938
Hsp92I	GRCGYC	1 cut(s)	104
HspAI	GCGC	3 cut(s)	259, 1127, 1929
KflI	GGGWCCC	1 cut(s)	320
KpnI	GGTACC	2 cut(s)	1768, 1837
KroI	GCCGGC	1 cut(s)	89
KroNI	GCCGGC	1 cut(s)	91
Ksp22I	TGATCA	2 cut(s)	1057, 2326
LmnI	GCTCC	2 cut(s)	353, 566
LweI	GCATC	5 cut(s)	1015, 1138, 1438, 1456, 1586
MaeI	CTAG	6 cut(s)	708, 1977, 1983, 2001, 2007, 2129
MaeII	ACGT	8 cut(s)	104, 209, 479, 501, 585, 744, 859, 938
MaeIII	GTNAC	9 cut(s)	617, 1297, 1303, 1316, 1630, 1898, 1961, 1991, 2041
MboII	GAAGA	8 cut(s)	46, 560, 962, 1045, 1208, 1854, 2301, 2352
MfeI	CAATTG	1 cut(s)	2180
MflI	RGATCY	3 cut(s)	550, 832, 1121
MhlI	GDGCHC	5 cut(s)	477, 797, 865, 1560, 2144
MluCI	AATT	7 cut(s)	1141, 1288, 1786, 1907, 2034, 2180, 2292
MlyI	GAGTC	7 cut(s)	104, 496, 532, 693, 1533, 2212, 2238
MmeI	TCCRAC	3 cut(s)	125, 270, 544
MroNI	GCCGGC	1 cut(s)	89
MslI	CAYNNNNRTG	7 cut(s)	26, 1134, 1266, 1808, 2246, 2262, 2322
MspA1I	CMGCKG	3 cut(s)	386, 959, 2150
MunI	CAATTG	1 cut(s)	2180
MvaI	CCWGG	8 cut(s)	1007, 1153, 1378, 1542, 1686, 1740, 1839, 2210
MvnI	CGCG	4 cut(s)	159, 259, 1654, 2040
NaeI	GCCGGC	1 cut(s)	91
NciI	CCSGG	4 cut(s)	324, 351, 543, 2026
NcoI	CCATGG	1 cut(s)	27
NdeI	CATATG	2 cut(s)	571, 1135
NgoMIV	GCCGGC	1 cut(s)	89
NmuCI	GTSAC	3 cut(s)	617, 1961, 2041
NsbI	TGCGCA	1 cut(s)	1128
NspI	RCATGY	4 cut(s)	179, 1114, 2051, 2207
NspV	TTCGAA	1 cut(s)	2287
OliI	CACNNNNGTG	3 cut(s)	1266, 2262, 2322
PaeR7I	CTCGAG	1 cut(s)	2137
PasI	CCCWGGG	1 cut(s)	1152
PciI	ACATGT	2 cut(s)	175, 2203
PdiI	GCCGGC	1 cut(s)	91
PfeI	GAWTC	5 cut(s)	902, 1854, 2235, 2284, 2376
PflFI	GACNNNGTC	1 cut(s)	1523
PfoI	TCCNGGA	3 cut(s)	322, 349, 1738
Ple19I	CGATCG	1 cut(s)	691
PleI	GAGTC	7 cut(s)	103, 495, 532, 692, 1532, 2212, 2237
PpsI	GAGTC	7 cut(s)	103, 495, 532, 692, 1532, 2212, 2237
Ppu21I	YACGTR	2 cut(s)	480, 860
PpuMI	RGGWCCY	3 cut(s)	190, 320, 1148
PscI	ACATGT	2 cut(s)	175, 2203
Psp124BI	GAGCTC	1 cut(s)	1560
Psp5II	RGGWCCY	3 cut(s)	190, 320, 1148
Psp6I	CCWGG	8 cut(s)	1005, 1151, 1376, 1540, 1684, 1738, 1837, 2208
PspEI	GGTNACC	2 cut(s)	617, 1961
PspFI	CCCAGC	1 cut(s)	1168
PspGI	CCWGG	8 cut(s)	1005, 1151, 1376, 1540, 1684, 1738, 1837, 2208
PspPPI	RGGWCCY	3 cut(s)	190, 320, 1148
PspXI	VCTCGAGB	1 cut(s)	2137
PstI	CTGCAG	1 cut(s)	1166
PstNI	CAGNNNCTG	2 cut(s)	962, 2153
PsuI	RGATCY	3 cut(s)	550, 832, 1121
PsyI	GACNNNGTC	1 cut(s)	1523
PvuI	CGATCG	1 cut(s)	691
PvuII	CAGCTG	2 cut(s)	959, 2150
RseI	CAYNNNNRTG	7 cut(s)	26, 1134, 1266, 1808, 2246, 2262, 2322
SacI	GAGCTC	1 cut(s)	1560
ScaI	AGTACT	2 cut(s)	1981, 2005
SchI	GAGTC	7 cut(s)	104, 496, 532, 693, 1533, 2212, 2238
SduI	GDGCHC	5 cut(s)	477, 797, 865, 1560, 2144
SfaNI	GCATC	5 cut(s)	1015, 1138, 1438, 1456, 1586
SfcI	CTRYAG	3 cut(s)	1162, 1849, 1938
Sfr274I	CTCGAG	1 cut(s)	2137
SfuI	TTCGAA	1 cut(s)	2287
SinI	GGWCC	4 cut(s)	190, 320, 1148, 1283
SlaI	CTCGAG	1 cut(s)	2137
SmiMI	CAYNNNNRTG	7 cut(s)	26, 1134, 1266, 1808, 2246, 2262, 2322
SmlI	CTYRAG	3 cut(s)	845, 1220, 2137
SmoI	CTYRAG	3 cut(s)	845, 1220, 2137
SpeI	ACTAGT	3 cut(s)	1976, 1982, 2000
Sse9I	AATT	7 cut(s)	1141, 1288, 1786, 1907, 2034, 2180, 2292
SspMI	CTAG	6 cut(s)	708, 1977, 1983, 2001, 2007, 2129
SstI	GAGCTC	1 cut(s)	1560
StyI	CCWWGG	5 cut(s)	27, 138, 246, 262, 1204
TaiI	ACGT	8 cut(s)	107, 212, 482, 504, 588, 747, 862, 941
TaqI	TCGA	8 cut(s)	687, 691, 741, 1065, 1503, 2079, 2138, 2287
TaqII	GACCGA	1 cut(s)	1536
TasI	AATT	7 cut(s)	1141, 1288, 1786, 1907, 2034, 2180, 2292
TatI	WGTACW	4 cut(s)	1979, 2003, 2133, 2200
TauI	GCSGC	5 cut(s)	89, 159, 259, 1260, 1620
TfiI	GAWTC	5 cut(s)	902, 1854, 2235, 2284, 2376
TscAI	CASTG	7 cut(s)	247, 912, 1024, 1035, 1273, 1942, 2168
TseFI	GTSAC	3 cut(s)	617, 1961, 2041
Tsp45I	GTSAC	3 cut(s)	617, 1961, 2041
TspDTI	ATGAA	5 cut(s)	46, 290, 294, 2234, 2352
TspRI	CASTG	7 cut(s)	247, 912, 1024, 1035, 1273, 1942, 2168
Tth111I	GACNNNGTC	1 cut(s)	1523
VpaK11BI	GGWCC	4 cut(s)	190, 320, 1148, 1283
XapI	RAATTY	3 cut(s)	1786, 1907, 2292
XceI	RCATGY	4 cut(s)	179, 1114, 2051, 2207
XcmI	CCANNNNNNNNNTGG	2 cut(s)	25, 1480
XhoI	CTCGAG	1 cut(s)	2137
XmiI	GTMKAC	1 cut(s)	1875
XspI	CTAG	6 cut(s)	708, 1977, 1983, 2001, 2007, 2129
ZraI	GACGTC	1 cut(s)	105
ZrmI	AGTACT	2 cut(s)	1981, 2005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.