Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0012517

Physical Location & Seq

Genomic Coordinates Forward (+)

16141714 .. 16143641

Gene Structure 1928 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g13140.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGCTGATCCGGCTTAAGAGTCTTACACCAACAGAGGGTGCTGCAGGGGCAAAACACTTGCCAGCAGAGACTGTGACCGTTGCATGCCCTGACCACCTTGTACTTGCTGATCTTCCTGTGGCAAGGGGCATTGGTGCAGTAACCACCACTACTCTTGTCAAGAATGTAGGCCGCAGGTCCCGTCGCCAGCTTGGAGAACGCGTCCACTTCTGTGTTAGCTGTGATTTTCCAATTGCTATCTATGGACGCCTGAGCCCTTGTGAGCATGCTTTTTGTCTGGATTGTGCTAGGAGTTACTCAATATGCTATCTTTGCGACGAACGCATCCAGAAGATTCAGACAATCAAAATGATGGAGGGGATCTTCATTTGTGCAGCCCCTCACTGTCTGAAATCTTTTCTGAAGAGGGGTGAATTTGAATCTCATATCCATGAGAACCATGCTTACCTTCTTCAGCCAAATGCAGGCAAAATGGATGGAAATGAATCAGAATCTCAGAATTCCAAACAATGTACAGTATCTGAATCCACAGCTCGAGCTCCACCAAGGCCATTAGTTTCTCCTGGTTCAAATTCTCAGCTCTATGATCGTGAGGACAAAGCTCAGCTTCAACAGACTAGAGAACAATCACTTCCAAGGCCAGTCATGCAGCCCAACCCAGCCCCAGATTTTGGGCAAGTCCAGAATAACCCTCCAGACCCCAGTCGCCCCCCAGGCTTTGACAGGCCTGCTCCCCTCAGTCTCTTCCATCAACAAAGCTATGATTCAATGGGTGCCCCAATGCAGGAATCTGGCCAATTTTCCGATAAGCAGCAAGGAATTTTATCTGAGACTCCCTTTTCTGAATATCCACCCATGCATTCCATTCCACCCCCTAATTATGCAATTCCTGTTAATTCCAATCAAGTGCGGATGCCTCTTCCATTTGGCCTTCCCTTTCTAGTTGATGGATCCCAGCAAGTTTATGGTGCTCCCTATGAGGAGATGGCACGACAGGATTCCGCCCCAGATGTTGGACCAGAACAGGGGTCATTACTGGGTTTCCCCCCTGGTTCGGTAGGTAAAATGAACTTTCCAGCTAGTTATCCACACTCTTGGAATGCAGGACAAGCTGGTGCTCCTTTTGAAGCTGCAGCAGGGGGTCAAGGAAATGCAGATAGTTTCTCTAACTCTGCAGAGCCTCAAGGACAAACTGCATTTTATCAAGGAGAATATGGACGGAATCCTGGTGGTATGCCCTTCAATTCTCCGCAAATGAGCAACACCGCAATGGAACAAGTGCAGGGTGGTAATATCATGGATCCCAGGGACGGCAAGGGTGTTTTAGCAGCACAGCCAATGTCACTTCCTCCGCCACCTCCACCCCCACCTCACATGTCACAACTCAAACGTAAGTTTTATCAAGGCGATACAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006464 GO:0006725 GO:0006807 GO:0007162 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030100 GO:0030155 GO:0030334 GO:0030335 GO:0032259 GO:0032446 GO:0032879 GO:0032991 GO:0034641 GO:0034708 GO:0036211 GO:0036396 GO:0040012 GO:0040017 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045293 GO:0045807 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051270 GO:0051272 GO:0060627 GO:0065007 GO:0070647 GO:0071704 GO:0080009 GO:0090304 GO:0140096 GO:1901360 GO:1901564 GO:1902494 GO:1990234 GO:2000145 GO:2000147

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

473

Amino Acids

51.22

Weight (kDa)

6.07

Isoelectric Point (pI)

65.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012517)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01160 AT5G01160
fragaria_vesca	FvH4_6g12190 FvH4_6g12190
malus_domestica	MD04G1145200.v1.1 MD12G1159000.v1.1
prunus_persica	Prupe.6G269500_v2.0.a1
pyrus_communis	pycom04g13140 pycom12g15090
rosa_chinensis	RchiOBHm_Chr3g0463991
rosa_laevigata	RLG00000024729
rosa_multiflora	Rmu_sc0006492.1_g000009
rosa_roxburghii	Rroxscaffold_6G00416080
rosa_rugosa	Rorug03G0069900
rosa_samantha	Rh3AG126800 Rh3BG130700 Rh3CG133300 Rh3DG132200
rosa_wichuraiana	Rw3G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	165
AccB1I	GGYRCC	1 cut(s)	773
AccB7I	CCANNNNNTGG	2 cut(s)	671, 1013
AccII	CGCG	1 cut(s)	201
AciI	CCGC	6 cut(s)	172, 910, 1002, 1250, 1266, 1352
AclWI	GGATC	5 cut(s)	368, 945, 958, 1295, 1308
AcoI	YGGCCR	1 cut(s)	793
AcsI	RAATTY	4 cut(s)	413, 499, 571, 819
AcuI	CTGAAG	2 cut(s)	422, 437
AcyI	GRCGYC	1 cut(s)	247
AfaI	GTAC	2 cut(s)	102, 514
AfiI	CCNNNNNNNGG	8 cut(s)	35, 464, 671, 784, 1013, 1025, 1054, 1310
AflII	CTTAAG	1 cut(s)	14
AflIII	ACRYGT	2 cut(s)	199, 1374
AgsI	TTSAA	6 cut(s)	419, 570, 611, 768, 1127, 1243
AjnI	CCWGG	5 cut(s)	562, 712, 1048, 1225, 1304
AleI	CACNNNNGTG	1 cut(s)	210
Alw21I	GWGCWC	3 cut(s)	541, 973, 1120
Alw26I	GTCTC	3 cut(s)	62, 746, 824
AlwI	GGATC	5 cut(s)	368, 945, 958, 1295, 1308
AlwNI	CAGNNNCTG	2 cut(s)	71, 521
Ama87I	CYCGRG	1 cut(s)	534
AoxI	GGCC	6 cut(s)	169, 548, 638, 725, 793, 928
ApeKI	GCWGC	7 cut(s)	41, 374, 649, 811, 1130, 1133, 1328
ApoI	RAATTY	4 cut(s)	413, 499, 571, 819
AspS9I	GGNCC	2 cut(s)	177, 1016
AsuHPI	GGTGA	1 cut(s)	422
AvaI	CYCGRG	1 cut(s)	534
AvaII	GGWCC	2 cut(s)	177, 1016
BaeGI	GKGCMC	1 cut(s)	778
BalI	TGGCCA	1 cut(s)	795
BamHI	GGATCC	2 cut(s)	950, 1300
BanI	GGYRCC	1 cut(s)	773
BanII	GRGCYC	2 cut(s)	257, 541
Bbv12I	GWGCWC	3 cut(s)	541, 973, 1120
BbvI	GCAGC	7 cut(s)	28, 386, 661, 823, 1117, 1145, 1340
BccI	CCATC	5 cut(s)	346, 470, 756, 941, 979
BceAI	ACGGC	1 cut(s)	1327
BciT130I	CCWGG	5 cut(s)	564, 714, 1050, 1227, 1306
BcoDI	GTCTC	3 cut(s)	62, 746, 824
BfaI	CTAG	4 cut(s)	288, 618, 941, 1080
BfmI	CTRYAG	3 cut(s)	42, 1131, 1173
BfrI	CTTAAG	1 cut(s)	14
BfuAI	ACCTGC	1 cut(s)	165
BglI	GCCNNNNNGGC	1 cut(s)	714
BisI	GCNGC	8 cut(s)	42, 172, 375, 650, 812, 1131, 1134, 1329
BlpI	GCTNAGC	1 cut(s)	603
BlsI	GCNGC	8 cut(s)	43, 173, 376, 651, 813, 1132, 1135, 1330
Bme1390I	CCNGG	5 cut(s)	564, 714, 1050, 1227, 1306
Bme18I	GGWCC	2 cut(s)	177, 1016
BmeT110I	CYCGRG	1 cut(s)	534
BmgT120I	GGNCC	2 cut(s)	177, 1016
BmiI	GGNNCC	4 cut(s)	179, 775, 952, 1302
BmrFI	CCNGG	5 cut(s)	564, 714, 1050, 1227, 1306
BmrI	ACTGGG	2 cut(s)	696, 1046
BmsI	GCATC	2 cut(s)	333, 903
BmuI	ACTGGG	2 cut(s)	696, 1046
BoxI	GACNNNNGTC	1 cut(s)	702
BpmI	CTGGAG	1 cut(s)	678
Bpu10I	CCTNAGC	1 cut(s)	251
Bpu1102I	GCTNAGC	1 cut(s)	603
BpuEI	CTTGAG	1 cut(s)	1167
BsaHI	GRCGYC	1 cut(s)	247
BsaJI	CCNNGG	6 cut(s)	545, 635, 712, 1048, 1304, 1305
BsaXI	ACNNNNNCTCC	2 cut(s)	186, 216
Bsc4I	CCNNNNNNNGG	8 cut(s)	35, 464, 671, 784, 1013, 1025, 1054, 1310
Bse1I	ACTGG	3 cut(s)	641, 702, 1041
Bse3DI	GCAATG	1 cut(s)	1275
BseBI	CCWGG	5 cut(s)	564, 714, 1050, 1227, 1306
BseDI	CCNNGG	6 cut(s)	545, 635, 712, 1048, 1304, 1305
BseGI	GGATG	3 cut(s)	324, 481, 918
BseLI	CCNNNNNNNGG	8 cut(s)	35, 464, 671, 784, 1013, 1025, 1054, 1310
BseMI	GCAATG	1 cut(s)	1275
BseMII	CTCAG	6 cut(s)	242, 509, 590, 617, 751, 819
BseNI	ACTGG	3 cut(s)	641, 702, 1041
BseRI	GAGGAG	1 cut(s)	995
BseSI	GKGCMC	1 cut(s)	778
BseXI	GCAGC	7 cut(s)	28, 386, 661, 823, 1117, 1145, 1340
BseYI	CCCAGC	2 cut(s)	658, 954
BsgI	GTGCAG	3 cut(s)	156, 393, 1301
Bsh1236I	CGCG	1 cut(s)	201
BshFI	GGCC	6 cut(s)	171, 550, 640, 727, 795, 930
BshNI	GGYRCC	1 cut(s)	773
BsiHKAI	GWGCWC	3 cut(s)	541, 973, 1120
BsiHKCI	CYCGRG	1 cut(s)	534
BsiSI	CCGG	1 cut(s)	10
BslFI	GGGAC	2 cut(s)	163, 1322
BslI	CCNNNNNNNGG	8 cut(s)	35, 464, 671, 784, 1013, 1025, 1054, 1310
BsmAI	GTCTC	3 cut(s)	62, 746, 824
BsmFI	GGGAC	2 cut(s)	163, 1322
BsmI	GAATGC	2 cut(s)	859, 1105
BsnI	GGCC	6 cut(s)	171, 550, 640, 727, 795, 930
BsoBI	CYCGRG	1 cut(s)	534
Bsp1286I	GDGCHC	5 cut(s)	257, 541, 778, 973, 1120
Bsp1407I	TGTACA	1 cut(s)	512
Bsp143I	GATC	6 cut(s)	6, 109, 360, 586, 950, 1300
Bsp1720I	GCTNAGC	1 cut(s)	603
BspACI	CCGC	6 cut(s)	172, 910, 1002, 1250, 1266, 1352
BspANI	GGCC	6 cut(s)	171, 550, 640, 727, 795, 930
BspCNI	CTCAG	6 cut(s)	243, 508, 589, 616, 750, 820
BspFNI	CGCG	1 cut(s)	201
BspLI	GGNNCC	4 cut(s)	179, 775, 952, 1302
BspMAI	CTGCAG	3 cut(s)	46, 1135, 1177
BspMI	ACCTGC	1 cut(s)	165
BspPI	GGATC	5 cut(s)	368, 945, 958, 1295, 1308
BspT107I	GGYRCC	1 cut(s)	773
BspTI	CTTAAG	1 cut(s)	14
BsrDI	GCAATG	1 cut(s)	1275
BsrGI	TGTACA	1 cut(s)	512
BsrI	ACTGG	3 cut(s)	641, 702, 1041
BssECI	CCNNGG	6 cut(s)	545, 635, 712, 1048, 1304, 1305
BssMI	GATC	6 cut(s)	6, 109, 360, 586, 950, 1300
BssNI	GRCGYC	1 cut(s)	247
BssT1I	CCWWGG	2 cut(s)	545, 635
Bst2UI	CCWGG	5 cut(s)	564, 714, 1050, 1227, 1306
Bst4CI	ACNGT	4 cut(s)	73, 79, 386, 517
Bst6I	CTCTTC	3 cut(s)	398, 749, 924
BstACI	GRCGYC	1 cut(s)	247
BstAFI	CTTAAG	1 cut(s)	14
BstAUI	TGTACA	1 cut(s)	512
BstC8I	GCNNGC	6 cut(s)	63, 85, 188, 267, 466, 729
BstDEI	CTNAG	6 cut(s)	251, 495, 576, 603, 737, 828
BstF5I	GGATG	3 cut(s)	324, 481, 918
BstFNI	CGCG	1 cut(s)	201
BstKTI	GATC	6 cut(s)	9, 112, 363, 589, 953, 1303
BstMAI	GTCTC	3 cut(s)	62, 746, 824
BstMBI	GATC	6 cut(s)	6, 109, 360, 586, 950, 1300
BstMWI	GCNNNNNNNGC	7 cut(s)	10, 47, 312, 321, 646, 714, 1109
BstNI	CCWGG	5 cut(s)	564, 714, 1050, 1227, 1306
BstNSI	RCATGY	3 cut(s)	87, 269, 1378
BstPAI	GACNNNNGTC	1 cut(s)	702
BstSCI	CCNGG	5 cut(s)	562, 712, 1048, 1225, 1304
BstSFI	CTRYAG	3 cut(s)	42, 1131, 1173
BstSLI	GKGCMC	1 cut(s)	778
BstUI	CGCG	1 cut(s)	201
BstV1I	GCAGC	7 cut(s)	28, 386, 661, 823, 1117, 1145, 1340
BstX2I	RGATCY	3 cut(s)	360, 950, 1300
BstXI	CCANNNNNNTGG	1 cut(s)	1095
BstYI	RGATCY	3 cut(s)	360, 950, 1300
BsuRI	GGCC	6 cut(s)	171, 550, 640, 727, 795, 930
BtsCI	GGATG	3 cut(s)	324, 481, 918
BtsIMutI	CAGTG	1 cut(s)	382
BveI	ACCTGC	1 cut(s)	165
Cac8I	GCNNGC	6 cut(s)	63, 85, 188, 267, 466, 729
CaiI	CAGNNNCTG	2 cut(s)	71, 521
Cfr13I	GGNCC	2 cut(s)	177, 1016
CseI	GACGC	2 cut(s)	190, 255
Csp6I	GTAC	2 cut(s)	101, 513
CspCI	CAANNNNNGTGG	2 cut(s)	136, 171
CviAII	CATG	8 cut(s)	84, 266, 431, 440, 646, 856, 1297, 1375
CviQI	GTAC	2 cut(s)	101, 513
DdeI	CTNAG	6 cut(s)	251, 495, 576, 603, 737, 828
DpnI	GATC	6 cut(s)	8, 111, 362, 588, 952, 1302
DpnII	GATC	6 cut(s)	6, 109, 360, 586, 950, 1300
EaeI	YGGCCR	1 cut(s)	793
Eam1104I	CTCTTC	3 cut(s)	398, 749, 924
EarI	CTCTTC	3 cut(s)	398, 749, 924
EciI	GGCGGA	2 cut(s)	991, 1341
Ecl136II	GAGCTC	1 cut(s)	539
Eco130I	CCWWGG	2 cut(s)	545, 635
Eco147I	AGGCCT	1 cut(s)	727
Eco24I	GRGCYC	2 cut(s)	257, 541
Eco47I	GGWCC	2 cut(s)	177, 1016
Eco53kI	GAGCTC	1 cut(s)	539
Eco57I	CTGAAG	2 cut(s)	422, 437
Eco88I	CYCGRG	1 cut(s)	534
EcoICRI	GAGCTC	1 cut(s)	539
EcoO109I	RGGNCCY	1 cut(s)	177
EcoRI	GAATTC	1 cut(s)	499
EcoRII	CCWGG	5 cut(s)	562, 712, 1048, 1225, 1304
EcoT14I	CCWWGG	2 cut(s)	545, 635
EcoT22I	ATGCAT	1 cut(s)	861
EcoT38I	GRGCYC	2 cut(s)	257, 541
ErhI	CCWWGG	2 cut(s)	545, 635
FaeI	CATG	8 cut(s)	87, 269, 434, 443, 649, 859, 1300, 1378
FalI	AAGNNNNNCTT	2 cut(s)	591, 623
FaqI	GGGAC	2 cut(s)	163, 1322
FatI	CATG	8 cut(s)	83, 265, 430, 439, 645, 855, 1296, 1374
Fnu4HI	GCNGC	8 cut(s)	42, 172, 375, 650, 812, 1131, 1134, 1329
FokI	GGATG	3 cut(s)	311, 488, 925
FriOI	GRGCYC	2 cut(s)	257, 541
Fsp4HI	GCNGC	8 cut(s)	42, 172, 375, 650, 812, 1131, 1134, 1329
FspBI	CTAG	4 cut(s)	288, 618, 941, 1080
GluI	GCNGC	8 cut(s)	42, 172, 375, 650, 812, 1131, 1134, 1329
GsaI	CCCAGC	2 cut(s)	662, 958
GsuI	CTGGAG	1 cut(s)	678
HaeIII	GGCC	6 cut(s)	171, 550, 640, 727, 795, 930
HapII	CCGG	1 cut(s)	10
HgaI	GACGC	2 cut(s)	190, 255
Hin1I	GRCGYC	1 cut(s)	247
Hin1II	CATG	8 cut(s)	87, 269, 434, 443, 649, 859, 1300, 1378
HpaII	CCGG	1 cut(s)	10
HphI	GGTGA	1 cut(s)	422
Hpy166II	GTNNAC	1 cut(s)	205
Hpy188I	TCNGA	9 cut(s)	339, 390, 402, 490, 498, 523, 805, 829, 844
Hpy188III	TCNNGA	6 cut(s)	160, 278, 328, 590, 682, 695
Hpy8I	GTNNAC	1 cut(s)	205
Hpy99I	CGWCG	2 cut(s)	186, 320
HpyAV	CCTTC	3 cut(s)	458, 941, 1249
HpyCH4III	ACNGT	4 cut(s)	73, 79, 386, 517
HpyCH4IV	ACGT	1 cut(s)	1390
HpyF10VI	GCNNNNNNNGC	7 cut(s)	10, 47, 312, 321, 646, 714, 1109
HpyF3I	CTNAG	6 cut(s)	251, 495, 576, 603, 737, 828
HpySE526I	ACGT	1 cut(s)	1390
Hsp92I	GRCGYC	1 cut(s)	247
Hsp92II	CATG	8 cut(s)	87, 269, 434, 443, 649, 859, 1300, 1378
Kzo9I	GATC	6 cut(s)	6, 109, 360, 586, 950, 1300
LmnI	GCTCC	4 cut(s)	544, 736, 976, 1123
Lsp1109I	GCAGC	7 cut(s)	28, 386, 661, 823, 1117, 1145, 1340
LweI	GCATC	2 cut(s)	333, 903
MaeI	CTAG	4 cut(s)	288, 618, 941, 1080
MaeII	ACGT	1 cut(s)	1390
MaeIII	GTNAC	5 cut(s)	73, 139, 293, 1341, 1377
MalI	GATC	6 cut(s)	8, 111, 362, 588, 952, 1302
MboI	GATC	6 cut(s)	6, 109, 360, 586, 950, 1300
MboII	GAAGA	7 cut(s)	104, 343, 355, 415, 443, 736, 911
MfeI	CAATTG	1 cut(s)	231
MflI	RGATCY	3 cut(s)	360, 950, 1300
MhlI	GDGCHC	5 cut(s)	257, 541, 778, 973, 1120
MlsI	TGGCCA	1 cut(s)	795
MluI	ACGCGT	1 cut(s)	199
MluNI	TGGCCA	1 cut(s)	795
MlyI	GAGTC	2 cut(s)	28, 826
MmeI	TCCRAC	1 cut(s)	994
Mox20I	TGGCCA	1 cut(s)	795
Mph1103I	ATGCAT	1 cut(s)	861
MscI	TGGCCA	1 cut(s)	795
MseI	TTAA	2 cut(s)	15, 894
MslI	CAYNNNNRTG	3 cut(s)	210, 429, 1268
Msp20I	TGGCCA	1 cut(s)	795
MspCI	CTTAAG	1 cut(s)	14
MspI	CCGG	1 cut(s)	10
MspR9I	CCNGG	5 cut(s)	564, 714, 1050, 1227, 1306
MunI	CAATTG	1 cut(s)	231
Mva1269I	GAATGC	2 cut(s)	859, 1105
MvaI	CCWGG	5 cut(s)	564, 714, 1050, 1227, 1306
MvnI	CGCG	1 cut(s)	201
MwoI	GCNNNNNNNGC	7 cut(s)	10, 47, 312, 321, 646, 714, 1109
NdeII	GATC	6 cut(s)	6, 109, 360, 586, 950, 1300
NlaIII	CATG	8 cut(s)	87, 269, 434, 443, 649, 859, 1300, 1378
NlaIV	GGNNCC	4 cut(s)	179, 775, 952, 1302
NmuCI	GTSAC	3 cut(s)	73, 1341, 1377
NsiI	ATGCAT	1 cut(s)	861
NspI	RCATGY	3 cut(s)	87, 269, 1378
OliI	CACNNNNGTG	1 cut(s)	210
PaeI	GCATGC	2 cut(s)	87, 269
PaeR7I	CTCGAG	1 cut(s)	534
PasI	CCCWGGG	1 cut(s)	1305
PceI	AGGCCT	1 cut(s)	727
PciI	ACATGT	1 cut(s)	1374
PctI	GAATGC	2 cut(s)	859, 1105
PfeI	GAWTC	9 cut(s)	334, 419, 485, 491, 524, 764, 788, 998, 1222
PflMI	CCANNNNNTGG	2 cut(s)	671, 1013
PkrI	GCNGC	8 cut(s)	43, 173, 376, 651, 813, 1132, 1135, 1330
PleI	GAGTC	2 cut(s)	27, 826
PpsI	GAGTC	2 cut(s)	27, 826
PpuMI	RGGWCCY	1 cut(s)	177
PscI	ACATGT	1 cut(s)	1374
PshAI	GACNNNNGTC	1 cut(s)	702
Psp124BI	GAGCTC	1 cut(s)	541
Psp5II	RGGWCCY	1 cut(s)	177
Psp6I	CCWGG	5 cut(s)	562, 712, 1048, 1225, 1304
PspFI	CCCAGC	2 cut(s)	658, 954
PspGI	CCWGG	5 cut(s)	562, 712, 1048, 1225, 1304
PspN4I	GGNNCC	4 cut(s)	179, 775, 952, 1302
PspPI	GGNCC	2 cut(s)	177, 1016
PspPPI	RGGWCCY	1 cut(s)	177
PspXI	VCTCGAGB	1 cut(s)	534
PsrI	GAACNNNNNNTAC	2 cut(s)	428, 460
PstI	CTGCAG	3 cut(s)	46, 1135, 1177
PstNI	CAGNNNCTG	2 cut(s)	71, 521
PsuI	RGATCY	3 cut(s)	360, 950, 1300
RsaI	GTAC	2 cut(s)	102, 514
RsaNI	GTAC	2 cut(s)	101, 513
RseI	CAYNNNNRTG	3 cut(s)	210, 429, 1268
SacI	GAGCTC	1 cut(s)	541
SaqAI	TTAA	2 cut(s)	15, 894
SatI	GCNGC	8 cut(s)	42, 172, 375, 650, 812, 1131, 1134, 1329
Sau3AI	GATC	6 cut(s)	6, 109, 360, 586, 950, 1300
Sau96I	GGNCC	2 cut(s)	177, 1016
SchI	GAGTC	2 cut(s)	28, 826
ScrFI	CCNGG	5 cut(s)	564, 714, 1050, 1227, 1306
SduI	GDGCHC	5 cut(s)	257, 541, 778, 973, 1120
SfaNI	GCATC	2 cut(s)	333, 903
SfcI	CTRYAG	3 cut(s)	42, 1131, 1173
Sfr274I	CTCGAG	1 cut(s)	534
SinI	GGWCC	2 cut(s)	177, 1016
SlaI	CTCGAG	1 cut(s)	534
SmiMI	CAYNNNNRTG	3 cut(s)	210, 429, 1268
SmlI	CTYRAG	3 cut(s)	14, 534, 1182
SmoI	CTYRAG	3 cut(s)	14, 534, 1182
SphI	GCATGC	2 cut(s)	87, 269
SseBI	AGGCCT	1 cut(s)	727
SsiI	CCGC	6 cut(s)	172, 910, 1002, 1250, 1266, 1352
SspMI	CTAG	4 cut(s)	288, 618, 941, 1080
SstI	GAGCTC	1 cut(s)	541
StuI	AGGCCT	1 cut(s)	727
StyD4I	CCNGG	5 cut(s)	562, 712, 1048, 1225, 1304
StyI	CCWWGG	2 cut(s)	545, 635
TaaI	ACNGT	4 cut(s)	73, 79, 386, 517
TaiI	ACGT	1 cut(s)	1393
TaqI	TCGA	1 cut(s)	535
TatI	WGTACW	2 cut(s)	100, 512
TauI	GCSGC	1 cut(s)	174
TfiI	GAWTC	9 cut(s)	334, 419, 485, 491, 524, 764, 788, 998, 1222
Tru1I	TTAA	2 cut(s)	15, 894
Tru9I	TTAA	2 cut(s)	15, 894
TscAI	CASTG	1 cut(s)	389
TseFI	GTSAC	3 cut(s)	73, 1341, 1377
TseI	GCWGC	7 cut(s)	41, 374, 649, 811, 1130, 1133, 1328
Tsp45I	GTSAC	3 cut(s)	73, 1341, 1377
TspDTI	ATGAA	3 cut(s)	355, 498, 1082
TspGWI	ACGGA	1 cut(s)	1234
TspRI	CASTG	1 cut(s)	389
Van91I	CCANNNNNTGG	2 cut(s)	671, 1013
Vha464I	CTTAAG	1 cut(s)	14
VpaK11BI	GGWCC	2 cut(s)	177, 1016
XapI	RAATTY	4 cut(s)	413, 499, 571, 819
XceI	RCATGY	3 cut(s)	87, 269, 1378
XcmI	CCANNNNNNNNNTGG	1 cut(s)	962
XhoI	CTCGAG	1 cut(s)	534
XspI	CTAG	4 cut(s)	288, 618, 941, 1080
Zsp2I	ATGCAT	1 cut(s)	861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.