Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0012517

Physical Location & Seq

Genomic Coordinates Reverse (-)

10336184 .. 10338092

Gene Structure 1909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G010710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGCTTCAGATCCGACTAAAGAGCGTTACACCCACCGAGGGCTCTCCCGGAGCAAAACACTTGCCGGCGGAGACCGTCACCGTCGCTTGCCCTGACCACCTCGTCCTCGCCGACCTTCCCGTGGCCAAGGGCATTGGCTCGGCCACCGCCACTTCGCTTGTCAAGACTATCGGTCGCCGGTCCCGTCGGCAGCTCGGTGAACGTGTCCACTTTTGTGTTCGCTGCGATTTCCCGATTGCTATCTATGGACGACTGAGCCCTTGTGAACATGCGTTTTGCTTGGATTGTGCTAGGAGTGATTCAATCTGCTACCTCTGTGATGAACGTATTCAGAAGATTCAGACTATCAAAATCATGGAGGGGATCTTCATTTGTGCTGCACCTCACTGTCTCAAATCTTTTCTAAAGAGGAGTGAATTTGAATCTCACATCCATGAGACACACGCGCACCTTCTTCAGCCAAATGCGGAGAAAATGGATGGAAATGAATCAGAAGCCCGGAGTAAAAACCAAGTAACGCCATCTGAATCCACCGCTCGTGCTCCACCAAGGCCAGTCTTTTCTCCTAGTTCAAATTCCCAGTTCCATGACCGTGATGACAAAGCTCGTCTTCAACGAGAACAATCACTTCCAAGGCCAGTCATGCAGCCTACACCACCTCCAGGTTTTGGGCAAATTCAGAATAATCCACCAGATCTCAGCCGACCGCCAGGCTTTGACAGGCCTGTTCCCCAGAATCTCTACCATCAACAAAGCTTTGATTCATCCGGTGCTCCCATACCGGAGTCTGGCCAGTTTTCAGATAAGCAGCAAGGAATGATATCCGAGACTCCCTTTTCTGAATATCCACCCATGCATTCTATTCAGCCTCCCAATTATGCATATGGCTTTCCTTTCCCAGTTGATGGATCTCAACCATTTTATGGTGCTCCCTATCAGATGGTACGACAGGATTCTGGACAGGATATGGGACAAGAACAGGGATCGTTGTTGGGTTTTCCCCCAGGTTCAGTACCTAACATGAATTTTGCAGCTGGTTATCCGCAGTCTTGGCATGCAGGACAGGCTGGTGTTCCTTTTGAACAAGCTACACCAGGTGGTCAAGGAACTGCAGATGGTTTCCCCAACTCCTCAGATCCTCAAGGAAATGCCACATATTATCAAGGCGGCATGCCTTTCAATCCTCAGCAGATGACAAACAAAGCAATGGAACAACCACCCCAGGGTGGTAATGCTATGGATCCGAGGGATAGCAAAGGTATATTAGCATCACAGCCCATGTCGCTTCCTCCGCCTCCTCCACCGCCGCAGCTCAAACGCAAGTTTTATCATGGTGACACAGGTCGAGATGGCCAGAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006464 GO:0006725 GO:0006807 GO:0007162 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030100 GO:0030155 GO:0030334 GO:0030335 GO:0032259 GO:0032446 GO:0032879 GO:0032991 GO:0034641 GO:0034708 GO:0036211 GO:0036396 GO:0040012 GO:0040017 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045293 GO:0045807 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051270 GO:0051272 GO:0060627 GO:0065007 GO:0070647 GO:0071704 GO:0080009 GO:0090304 GO:0140096 GO:1901360 GO:1901564 GO:1902494 GO:1990234 GO:2000145 GO:2000147

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

453

Amino Acids

49.5

Weight (kDa)

6.53

Isoelectric Point (pI)

70.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012517)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01160 AT5G01160
fragaria_vesca	FvH4_6g12190 FvH4_6g12190
malus_domestica	MD04G1145200.v1.1 MD12G1159000.v1.1
prunus_persica	Prupe.6G269500_v2.0.a1
pyrus_communis	pycom04g13140 pycom12g15090
rosa_chinensis	RchiOBHm_Chr3g0463991
rosa_laevigata	RLG00000024729
rosa_multiflora	Rmu_sc0006492.1_g000009
rosa_roxburghii	Rroxscaffold_6G00416080
rosa_rugosa	Rorug03G0069900
rosa_samantha	Rh3AG126800 Rh3BG130700 Rh3CG133300 Rh3DG132200
rosa_wichuraiana	Rw3G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	101
AccB7I	CCANNNNNTGG	3 cut(s)	668, 905, 923
AccBSI	CCGCTC	1 cut(s)	536
AccII	CGCG	1 cut(s)	446
AclWI	GGATC	7 cut(s)	4, 371, 916, 991, 1130, 1235, 1248
AcoI	YGGCCR	4 cut(s)	123, 141, 790, 1351
AcsI	RAATTY	4 cut(s)	416, 574, 675, 1024
AcuI	CTGAAG	1 cut(s)	440
AdeI	CACNNNGTG	1 cut(s)	1097
AfaI	GTAC	2 cut(s)	945, 1014
AfiI	CCNNNNNNNGG	9 cut(s)	38, 121, 662, 668, 788, 905, 923, 1223, 1226
AflIII	ACRYGT	1 cut(s)	202
AgsI	TTSAA	6 cut(s)	303, 422, 573, 614, 1082, 1180
AhdI	GACNNNNNGTC	1 cut(s)	171
AjnI	CCWGG	5 cut(s)	661, 709, 1003, 1093, 1221
AleI	CACNNNNGTG	1 cut(s)	213
AluBI	AGCT	7 cut(s)	193, 605, 756, 1034, 1088, 1312, 1359
AluI	AGCT	7 cut(s)	193, 605, 756, 1034, 1088, 1312, 1359
Alw21I	GWGCWC	3 cut(s)	544, 775, 931
Alw26I	GTCTC	4 cut(s)	65, 395, 431, 821
AlwI	GGATC	7 cut(s)	4, 371, 916, 991, 1130, 1235, 1248
AoxI	GGCC	7 cut(s)	123, 141, 551, 635, 722, 790, 1351
ApeKI	GCWGC	7 cut(s)	190, 222, 377, 646, 808, 1031, 1309
ApoI	RAATTY	4 cut(s)	416, 574, 675, 1024
Asp700I	GAANNNNTTC	1 cut(s)	327
AspLEI	GCGC	1 cut(s)	448
AspS9I	GGNCC	1 cut(s)	180
AsuC2I	CCSGG	2 cut(s)	48, 499
AsuHPI	GGTGA	3 cut(s)	70, 209, 1346
AvaII	GGWCC	1 cut(s)	180
BalI	TGGCCA	3 cut(s)	125, 792, 1353
BamHI	GGATCC	1 cut(s)	1240
BanII	GRGCYC	2 cut(s)	44, 260
BauI	CACGAG	1 cut(s)	537
BbsI	GAAGAC	1 cut(s)	602
Bbv12I	GWGCWC	3 cut(s)	544, 775, 931
BbvCI	CCTCAGC	1 cut(s)	1185
BbvI	GCAGC	7 cut(s)	202, 209, 364, 658, 820, 1043, 1321
BccI	CCATC	7 cut(s)	473, 529, 753, 899, 934, 1109, 1343
BciT130I	CCWGG	5 cut(s)	663, 711, 1005, 1095, 1223
BcnI	CCSGG	2 cut(s)	48, 499
BcoDI	GTCTC	4 cut(s)	65, 395, 431, 821
BfaI	CTAG	3 cut(s)	291, 567, 1360
BfmI	CTRYAG	1 cut(s)	1110
BglII	AGATCT	1 cut(s)	694
BisI	GCNGC	9 cut(s)	191, 223, 378, 647, 809, 1032, 1168, 1307, 1310
BlsI	GCNGC	9 cut(s)	192, 224, 379, 648, 810, 1033, 1169, 1308, 1311
Bme1390I	CCNGG	7 cut(s)	48, 499, 663, 711, 1005, 1095, 1223
Bme18I	GGWCC	1 cut(s)	180
BmeRI	GACNNNNNGTC	1 cut(s)	171
BmgT120I	GGNCC	1 cut(s)	180
BmiI	GGNNCC	2 cut(s)	182, 1242
BmrFI	CCNGG	7 cut(s)	48, 499, 663, 711, 1005, 1095, 1223
BmrI	ACTGGG	2 cut(s)	574, 893
BmsI	GCATC	1 cut(s)	1277
BmuI	ACTGGG	2 cut(s)	574, 893
BoxI	GACNNNNGTC	1 cut(s)	1341
BpiI	GAAGAC	1 cut(s)	602
BpmI	CTGGAG	1 cut(s)	645
Bpu10I	CCTNAGC	1 cut(s)	1185
BpuEI	CTTGAG	1 cut(s)	1125
BpuMI	CCSGG	2 cut(s)	48, 499
BsaBI	GATNNNNATC	1 cut(s)	239
BsaI	GGTCTC	1 cut(s)	65
BsaJI	CCNNGG	9 cut(s)	36, 120, 126, 548, 632, 1003, 1221, 1222, 1244
BsaWI	WCCGGW	2 cut(s)	767, 781
BsaXI	ACNNNNNCTCC	2 cut(s)	643, 673
Bsc4I	CCNNNNNNNGG	9 cut(s)	38, 121, 662, 668, 788, 905, 923, 1223, 1226
Bse118I	RCCGGY	2 cut(s)	64, 177
Bse1I	ACTGG	5 cut(s)	554, 580, 638, 793, 899
Bse3DI	GCAATG	1 cut(s)	1212
Bse8I	GATNNNNATC	1 cut(s)	239
BseBI	CCWGG	5 cut(s)	663, 711, 1005, 1095, 1223
BseDI	CCNNGG	9 cut(s)	36, 120, 126, 548, 632, 1003, 1221, 1222, 1244
BseGI	GGATG	3 cut(s)	429, 484, 764
BseJI	GATNNNNATC	1 cut(s)	239
BseLI	CCNNNNNNNGG	9 cut(s)	38, 121, 662, 668, 788, 905, 923, 1223, 1226
BseMI	GCAATG	1 cut(s)	1212
BseMII	CTCAG	4 cut(s)	245, 712, 1146, 1199
BseNI	ACTGG	5 cut(s)	554, 580, 638, 793, 899
BseRI	GAGGAG	3 cut(s)	424, 1120, 1287
BseXI	GCAGC	7 cut(s)	202, 209, 364, 658, 820, 1043, 1321
BsgI	GTGCAG	1 cut(s)	363
Bsh1236I	CGCG	1 cut(s)	446
Bsh1285I	CGRYCG	2 cut(s)	175, 707
BshFI	GGCC	7 cut(s)	125, 143, 553, 637, 724, 792, 1353
BsiEI	CGRYCG	2 cut(s)	175, 707
BsiHKAI	GWGCWC	3 cut(s)	544, 775, 931
BsiSI	CCGG	6 cut(s)	48, 65, 178, 499, 768, 782
BslFI	GGGAC	2 cut(s)	166, 984
BslI	CCNNNNNNNGG	9 cut(s)	38, 121, 662, 668, 788, 905, 923, 1223, 1226
BsmAI	GTCTC	4 cut(s)	65, 395, 431, 821
BsmFI	GGGAC	2 cut(s)	166, 984
BsmI	GAATGC	1 cut(s)	856
BsnI	GGCC	7 cut(s)	125, 143, 553, 637, 724, 792, 1353
Bso31I	GGTCTC	1 cut(s)	65
Bsp1286I	GDGCHC	5 cut(s)	44, 260, 544, 775, 931
Bsp143I	GATC	7 cut(s)	9, 363, 694, 908, 983, 1135, 1240
BspANI	GGCC	7 cut(s)	125, 143, 553, 637, 724, 792, 1353
BspCNI	CTCAG	4 cut(s)	246, 711, 1145, 1198
BspFNI	CGCG	1 cut(s)	446
BspLI	GGNNCC	2 cut(s)	182, 1242
BspMAI	CTGCAG	1 cut(s)	1114
BspPI	GGATC	7 cut(s)	4, 371, 916, 991, 1130, 1235, 1248
BspTNI	GGTCTC	1 cut(s)	65
BsrBI	CCGCTC	1 cut(s)	536
BsrDI	GCAATG	1 cut(s)	1212
BsrFI	RCCGGY	2 cut(s)	64, 177
BsrI	ACTGG	5 cut(s)	554, 580, 638, 793, 899
BssAI	RCCGGY	2 cut(s)	64, 177
BssECI	CCNNGG	9 cut(s)	36, 120, 126, 548, 632, 1003, 1221, 1222, 1244
BssMI	GATC	7 cut(s)	9, 363, 694, 908, 983, 1135, 1240
BssSI	CACGAG	1 cut(s)	537
BssT1I	CCWWGG	3 cut(s)	126, 548, 632
Bst2BI	CACGAG	1 cut(s)	537
Bst2UI	CCWGG	5 cut(s)	663, 711, 1005, 1095, 1223
Bst4CI	ACNGT	4 cut(s)	76, 82, 389, 593
BstC8I	GCNNGC	4 cut(s)	66, 88, 1056, 1172
BstDEI	CTNAG	4 cut(s)	254, 698, 1132, 1185
BstDSI	CCRYGG	1 cut(s)	120
BstF5I	GGATG	3 cut(s)	429, 484, 764
BstFNI	CGCG	1 cut(s)	446
BstHHI	GCGC	1 cut(s)	448
BstKTI	GATC	7 cut(s)	12, 366, 697, 911, 986, 1138, 1243
BstMAI	GTCTC	4 cut(s)	65, 395, 431, 821
BstMBI	GATC	7 cut(s)	9, 363, 694, 908, 983, 1135, 1240
BstMCI	CGRYCG	2 cut(s)	175, 707
BstMWI	GCNNNNNNNGC	5 cut(s)	643, 1051, 1064, 1282, 1291
BstNI	CCWGG	5 cut(s)	663, 711, 1005, 1095, 1223
BstNSI	RCATGY	3 cut(s)	272, 1058, 1174
BstPAI	GACNNNNGTC	1 cut(s)	1341
BstSCI	CCNGG	7 cut(s)	46, 497, 661, 709, 1003, 1093, 1221
BstSFI	CTRYAG	1 cut(s)	1110
BstUI	CGCG	1 cut(s)	446
BstV1I	GCAGC	7 cut(s)	202, 209, 364, 658, 820, 1043, 1321
BstV2I	GAAGAC	1 cut(s)	602
BstX2I	RGATCY	6 cut(s)	9, 363, 694, 908, 1135, 1240
BstYI	RGATCY	6 cut(s)	9, 363, 694, 908, 1135, 1240
BsuRI	GGCC	7 cut(s)	125, 143, 553, 637, 724, 792, 1353
BtgI	CCRYGG	1 cut(s)	120
BtsCI	GGATG	3 cut(s)	429, 484, 764
BtsIMutI	CAGTG	1 cut(s)	385
Cac8I	GCNNGC	4 cut(s)	66, 88, 1056, 1172
CfoI	GCGC	1 cut(s)	448
Cfr10I	RCCGGY	2 cut(s)	64, 177
Cfr13I	GGNCC	1 cut(s)	180
CsiI	ACCWGGT	1 cut(s)	1093
Csp6I	GTAC	2 cut(s)	944, 1013
CspCI	CAANNNNNGTGG	2 cut(s)	139, 174
CviQI	GTAC	2 cut(s)	944, 1013
DdeI	CTNAG	4 cut(s)	254, 698, 1132, 1185
DpnI	GATC	7 cut(s)	11, 365, 696, 910, 985, 1137, 1242
DpnII	GATC	7 cut(s)	9, 363, 694, 908, 983, 1135, 1240
DraIII	CACNNNGTG	1 cut(s)	1097
DrdI	GACNNNNNNGTC	1 cut(s)	101
DriI	GACNNNNNGTC	1 cut(s)	171
DseDI	GACNNNNNNGTC	1 cut(s)	101
EaeI	YGGCCR	4 cut(s)	123, 141, 790, 1351
Eam1105I	GACNNNNNGTC	1 cut(s)	171
EciI	GGCGGA	2 cut(s)	83, 1281
Eco130I	CCWWGG	3 cut(s)	126, 548, 632
Eco147I	AGGCCT	1 cut(s)	724
Eco24I	GRGCYC	2 cut(s)	44, 260
Eco31I	GGTCTC	1 cut(s)	65
Eco32I	GATATC	1 cut(s)	822
Eco47I	GGWCC	1 cut(s)	180
Eco57I	CTGAAG	1 cut(s)	440
EcoRII	CCWGG	5 cut(s)	661, 709, 1003, 1093, 1221
EcoRV	GATATC	1 cut(s)	822
EcoT14I	CCWWGG	3 cut(s)	126, 548, 632
EcoT22I	ATGCAT	2 cut(s)	858, 883
EcoT38I	GRGCYC	2 cut(s)	44, 260
ErhI	CCWWGG	3 cut(s)	126, 548, 632
FalI	AAGNNNNNCTT	2 cut(s)	594, 626
FaqI	GGGAC	2 cut(s)	166, 984
FauNDI	CATATG	1 cut(s)	883
Fnu4HI	GCNGC	9 cut(s)	191, 223, 378, 647, 809, 1032, 1168, 1307, 1310
FokI	GGATG	3 cut(s)	416, 491, 751
FriOI	GRGCYC	2 cut(s)	44, 260
Fsp4HI	GCNGC	9 cut(s)	191, 223, 378, 647, 809, 1032, 1168, 1307, 1310
FspBI	CTAG	3 cut(s)	291, 567, 1360
GlaI	GCGC	1 cut(s)	447
GluI	GCNGC	9 cut(s)	191, 223, 378, 647, 809, 1032, 1168, 1307, 1310
GsuI	CTGGAG	1 cut(s)	645
HaeIII	GGCC	7 cut(s)	125, 143, 553, 637, 724, 792, 1353
HapII	CCGG	6 cut(s)	48, 65, 178, 499, 768, 782
HhaI	GCGC	1 cut(s)	448
Hin6I	GCGC	1 cut(s)	446
HinP1I	GCGC	1 cut(s)	446
HindIII	AAGCTT	1 cut(s)	754
HpaII	CCGG	6 cut(s)	48, 65, 178, 499, 768, 782
HphI	GGTGA	3 cut(s)	70, 209, 1346
Hpy166II	GTNNAC	3 cut(s)	200, 208, 266
Hpy188III	TCNNGA	4 cut(s)	163, 232, 957, 1346
Hpy8I	GTNNAC	3 cut(s)	200, 208, 266
Hpy99I	CGWCG	2 cut(s)	86, 189
HpyAV	CCTTC	2 cut(s)	125, 461
HpyCH4III	ACNGT	4 cut(s)	76, 82, 389, 593
HpyCH4IV	ACGT	2 cut(s)	202, 325
HpyCH4V	TGCA	7 cut(s)	380, 646, 856, 881, 1031, 1058, 1112
HpyF10VI	GCNNNNNNNGC	5 cut(s)	643, 1051, 1064, 1282, 1291
HpyF3I	CTNAG	4 cut(s)	254, 698, 1132, 1185
HpySE526I	ACGT	2 cut(s)	202, 325
HspAI	GCGC	1 cut(s)	446
KroI	GCCGGC	1 cut(s)	64
KroNI	GCCGGC	1 cut(s)	66
Kzo9I	GATC	7 cut(s)	9, 363, 694, 908, 983, 1135, 1240
LmnI	GCTCC	4 cut(s)	50, 547, 778, 934
Lsp1109I	GCAGC	7 cut(s)	202, 209, 364, 658, 820, 1043, 1321
LweI	GCATC	1 cut(s)	1277
MabI	ACCWGGT	1 cut(s)	1093
MaeI	CTAG	3 cut(s)	291, 567, 1360
MaeII	ACGT	2 cut(s)	202, 325
MaeIII	GTNAC	4 cut(s)	25, 76, 514, 1334
MalI	GATC	7 cut(s)	11, 365, 696, 910, 985, 1137, 1242
MbiI	CCGCTC	1 cut(s)	536
MboI	GATC	7 cut(s)	9, 363, 694, 908, 983, 1135, 1240
MboII	GAAGA	4 cut(s)	346, 358, 446, 602
MflI	RGATCY	6 cut(s)	9, 363, 694, 908, 1135, 1240
MhlI	GDGCHC	5 cut(s)	44, 260, 544, 775, 931
MlsI	TGGCCA	3 cut(s)	125, 792, 1353
MluCI	AATT	5 cut(s)	416, 574, 675, 874, 1024
MluNI	TGGCCA	3 cut(s)	125, 792, 1353
MlyI	GAGTC	2 cut(s)	794, 823
MmeI	TCCRAC	1 cut(s)	37
Mox20I	TGGCCA	3 cut(s)	125, 792, 1353
Mph1103I	ATGCAT	2 cut(s)	858, 883
MroNI	GCCGGC	1 cut(s)	64
MroXI	GAANNNNTTC	1 cut(s)	327
MscI	TGGCCA	3 cut(s)	125, 792, 1353
MslI	CAYNNNNRTG	3 cut(s)	213, 432, 591
Msp20I	TGGCCA	3 cut(s)	125, 792, 1353
MspA1I	CMGCKG	1 cut(s)	1034
MspI	CCGG	6 cut(s)	48, 65, 178, 499, 768, 782
MspR9I	CCNGG	7 cut(s)	48, 499, 663, 711, 1005, 1095, 1223
Mva1269I	GAATGC	1 cut(s)	856
MvaI	CCWGG	5 cut(s)	663, 711, 1005, 1095, 1223
MvnI	CGCG	1 cut(s)	446
MwoI	GCNNNNNNNGC	5 cut(s)	643, 1051, 1064, 1282, 1291
NaeI	GCCGGC	1 cut(s)	66
NciI	CCSGG	2 cut(s)	48, 499
NdeI	CATATG	1 cut(s)	883
NdeII	GATC	7 cut(s)	9, 363, 694, 908, 983, 1135, 1240
NgoMIV	GCCGGC	1 cut(s)	64
NlaIV	GGNNCC	2 cut(s)	182, 1242
NmeAIII	GCCGAG	1 cut(s)	119
NmuCI	GTSAC	2 cut(s)	76, 1334
NsiI	ATGCAT	2 cut(s)	858, 883
NspI	RCATGY	3 cut(s)	272, 1058, 1174
OliI	CACNNNNGTG	1 cut(s)	213
PaeI	GCATGC	2 cut(s)	1058, 1174
PasI	CCCWGGG	1 cut(s)	1222
PceI	AGGCCT	1 cut(s)	724
PcsI	WCGNNNNNNNCGW	3 cut(s)	108, 181, 613
PctI	GAATGC	1 cut(s)	856
PdiI	GCCGGC	1 cut(s)	66
PdmI	GAANNNNTTC	1 cut(s)	327
PfeI	GAWTC	8 cut(s)	299, 337, 422, 488, 527, 736, 761, 953
PflMI	CCANNNNNTGG	3 cut(s)	668, 905, 923
PfoI	TCCNGGA	1 cut(s)	46
PkrI	GCNGC	9 cut(s)	192, 224, 379, 648, 810, 1033, 1169, 1308, 1311
PleI	GAGTC	2 cut(s)	793, 823
PpsI	GAGTC	2 cut(s)	793, 823
PshAI	GACNNNNGTC	1 cut(s)	1341
Psp6I	CCWGG	5 cut(s)	661, 709, 1003, 1093, 1221
PspGI	CCWGG	5 cut(s)	661, 709, 1003, 1093, 1221
PspN4I	GGNNCC	2 cut(s)	182, 1242
PspPI	GGNCC	1 cut(s)	180
PstI	CTGCAG	1 cut(s)	1114
PsuI	RGATCY	6 cut(s)	9, 363, 694, 908, 1135, 1240
PvuII	CAGCTG	1 cut(s)	1034
RsaI	GTAC	2 cut(s)	945, 1014
RsaNI	GTAC	2 cut(s)	944, 1013
RseI	CAYNNNNRTG	3 cut(s)	213, 432, 591
SatI	GCNGC	9 cut(s)	191, 223, 378, 647, 809, 1032, 1168, 1307, 1310
Sau3AI	GATC	7 cut(s)	9, 363, 694, 908, 983, 1135, 1240
Sau96I	GGNCC	1 cut(s)	180
SchI	GAGTC	2 cut(s)	794, 823
ScrFI	CCNGG	7 cut(s)	48, 499, 663, 711, 1005, 1095, 1223
SduI	GDGCHC	5 cut(s)	44, 260, 544, 775, 931
SexAI	ACCWGGT	1 cut(s)	1093
SfaNI	GCATC	1 cut(s)	1277
SfcI	CTRYAG	1 cut(s)	1110
SinI	GGWCC	1 cut(s)	180
SmiMI	CAYNNNNRTG	3 cut(s)	213, 432, 591
SmlI	CTYRAG	1 cut(s)	1140
SmoI	CTYRAG	1 cut(s)	1140
SphI	GCATGC	2 cut(s)	1058, 1174
Sse9I	AATT	5 cut(s)	416, 574, 675, 874, 1024
SseBI	AGGCCT	1 cut(s)	724
SspMI	CTAG	3 cut(s)	291, 567, 1360
StuI	AGGCCT	1 cut(s)	724
StyD4I	CCNGG	7 cut(s)	46, 497, 661, 709, 1003, 1093, 1221
StyI	CCWWGG	3 cut(s)	126, 548, 632
TaaI	ACNGT	4 cut(s)	76, 82, 389, 593
TaiI	ACGT	2 cut(s)	205, 328
TaqI	TCGA	1 cut(s)	1345
TaqII	GACCGA	1 cut(s)	161
TasI	AATT	5 cut(s)	416, 574, 675, 874, 1024
TauI	GCSGC	2 cut(s)	1170, 1309
TfiI	GAWTC	8 cut(s)	299, 337, 422, 488, 527, 736, 761, 953
TscAI	CASTG	1 cut(s)	392
TseFI	GTSAC	2 cut(s)	76, 1334
TseI	GCWGC	7 cut(s)	190, 222, 377, 646, 808, 1031, 1309
Tsp45I	GTSAC	2 cut(s)	76, 1334
TspDTI	ATGAA	5 cut(s)	336, 358, 501, 753, 1037
TspRI	CASTG	1 cut(s)	392
Van91I	CCANNNNNTGG	3 cut(s)	668, 905, 923
VpaK11BI	GGWCC	1 cut(s)	180
XapI	RAATTY	4 cut(s)	416, 574, 675, 1024
XceI	RCATGY	3 cut(s)	272, 1058, 1174
XmnI	GAANNNNTTC	1 cut(s)	327
XspI	CTAG	3 cut(s)	291, 567, 1360
Zsp2I	ATGCAT	2 cut(s)	858, 883

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.