Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0005401

Physical Location & Seq

Genomic Coordinates Reverse (-)

18071987 .. 18075913

Gene Structure 3927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g15200.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

ATGTGTATACTTTGTGTGATTCAGAAGTGGTCTCGCCGGGTTGCTACGATGCTTCCTTGGTTAGTTATTCCATTAATAGGACTATGGGGTCTCTCTCAGCTTCTACCACCAGCTTTCCGATTTGAGATAACTTCGCCTAGACTCGCTTGTGTTGTTGTGCTCTTGGTTACTCTCTTCTGGTATGAGGTTTTGATGCCTCAGCTTTCAGCTTGGCGGGTGCGGAGGAATGCAATGCTTAGAGAGAGGAAAAGGTTTGAGGCAATAGAGTTGCACAAGCTGAGGAAAACAGCAACGAGGCGGTGTCGAAACTGCAAGACTCCGTATAGGGATCAGAATCCTGGCGGTGGTCGGTTTATGTGTTCGTATTGTGGGCATATGTCAAAGAGACCAGTTTTAGACTTACCTGTGCCCGGGATGGGACTCTCGAATTCTGGGATCATCAAAGTGTTAGTTGAAAAGGTTGGAAGGATATTGACTGGAAAGGTGTGGTCTGAAAATGGGTCGATGTACGGTCAAGATTCGTTGGAGAATGGAAATTGGGTCGGTGGTTCTATTACTGGGAAGTCTAGTTATTGCAGAAAGGACGGGAGCAGTGTTTTTGGAGGGGATGAGAGTTGTTTGGCAGAGAAGTCGTATTCAGGTGTTGTTAATTTTGCTTGCAAGCTACTAACTTCTTTTTTCTTGAGTGTTAGATGGCTTTGGAGAAAGCTTTTTAGGATTAGTACATCAGGGGAAGATGATGCATCTGACACAGACCATAATGGATCGGCCAAAAGGGGCGAGAATGGGGCCAACTTGAATGAGAGTAGAGGAGAAAAGGCTCGCAGAAAAGCTGAAGAGAAGAGACAGGCTAGGATAGAGAAGGAGCTTTTAGAGGAGGAAGAAAGAAAGCAGAGGGAGGAAGTTGCAAGGTTGGTGGAGGAACGCAGGAGAATTAGGGATGAGAAAAAGGAAGCTGAACGTGGGAAATCATCACCACCTGCAAGGGAAAAAGATACTAAGAGAGAAGCAGAAAAGAAACGACAGGAAAGAAGGAAAGAGAAGGACAAGGGTTCTAGCAAGAGCAACTCTGAAGCAGAAGAGCTGGAAAAGAGAGCAGGTAAGGAAAGTGAACGAAAGCGGGACTTTGACAAGAAGAGTGATATTGACCGCCACGAACTTCTGAAATCAGGGGTAGATTTTCTTAAGGGACAAAGCACAGAGACGGGGCATAGTGTAAAAAGTTCATATACAAACAATTTTATTCAGGGAAATGCTGGATCTAGGTACCTGGACCGTATGAGGGGTACAATTTTTAATTCTTCAAAGGCCTTTGGTGGTGGTAGTTTCTTTGGAAAGGGTGCTAATACTGCAGTGACAAAAGAAACCCAATCTAGCAGTTCTGTAGATCATGTCCATATTTATGCCCAGAAGAGAGACTTATATCCACCTGAGCGCGTAGCTGCGAGACCTTTTATGAATGGAGATGATAAGAGTGTCCACCGCCCTGTTCACTCAGAACCACAGACAGGGACTGCACCCAAAAAATCATGGCAGCAATTGTTTACTCGTTCATCTTCCGTGCCTTCATCATCTAGTGTAAATGTAATAAGTAGACCAAATGCAAAGTCTCAGACAGAAGTTCAAAGTCCTCAGTTATCTGGTCAGTCCTCGTCAGTACAATCATTTGATAATCCAATCAACTTTGGGCTGCCATCACCATTCGTTTTATCAACTACCTATCCAAAAGCATCTACTAGCAGCAGTTTAGGTTTTTCACCTGCAATTGATCCCATACTTCCTCGCATTGGTGAAGGGCATCATGAACGTATACCTGAGGAGCCAGAGCTTTTTGAAGACCCATGTTACATCCCTGATCCAGTATCCTTGCTTGGGCCTGTTTCTGAGTCACTTGATAATTTTCAATTGGACATGGGGACTGGTTTTGTGAAAGATATGGGATTGGAGAGGTCTCGCACATTGAAGAATGGACCTGCTTCTTCTGAAGTGAACAAGCCATCTCCAATTGAGTCACCAATGTCACGAGAAAAGCATAATAACTCTAGTCGCTTCCCTAGTACCCCAAAGGCCCAAGATATGCATGCTTCACCCCTGGATGATGCAAATGCAAATGATAAGGGAACGTGGCAAATGTGGAACAGTTGTCCTCTTGGTCACGATGGTCTAGGTTTTGCAGGTGGCTCTCCAAGCTGGTTTTTGCCTCCAGAACTAAACAGATCAAACAAGGATGATCTCACACACCCTTCATCAGTATCACTATTTACTTCAGAAGATCAGGTTGTTTCTGGCTCTCAATCTCCTAAGAATCAGAGCATTTTTCTTGGCAATGGCCAGAATGGCGGAACTTTTAGCCCTGTTACTGGTTCCAGTGATCATGATCCTTGGTTGCAGAAAGCCTTTTTTCCTCCATTGTCAACTGCTGAAAACCATTGTCCTCTCAGACCTCCGGGCGAAACTACTAAGAATGAACTGATTTTTGGGAGTACCATCAGAGCTACTGGAAACCATCCATTTGAGCTGTCTCAAGCAAACGGGTGGTCAAACGGAAAGGAATGGGATGAATGCTCTGTGAAGGGAACGGGGGACGGTGTTGGAAAGCCATCTGTGTTGAGGCCTCATAGCAGGGGTCTGTATCCCACCCTGAATGTACAGCCGCTTTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

888

Amino Acids

98.57

Weight (kDa)

9.21

Isoelectric Point (pI)

58.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51640 AT3G51640 AT3G51640 AT3G51650 AT3G51650 AT3G51650 AT3G51650
fragaria_vesca	FvH4_6g10170 FvH4_6g10170 FvH4_6g10170
malus_domestica	MD04G1172000.v1.1 MD12G1185300.v1.1
prunus_persica	Prupe.6G290600_v2.0.a1 Prupe.6G290600_v2.0.a1
pyrus_communis	pycom04g15200 pycom12g17380
rosa_chinensis	RchiOBHm_Chr3g0460911
rosa_laevigata	RLG00000024966
rosa_multiflora	Rmu_sc0008258.1_g000012 Rmu_sc0021377.1_g000004
rosa_roxburghii	Rroxscaffold_6G00419040
rosa_rugosa	Rorug03G0047000 Rorug03G0047000 Rorug03G0047000
rosa_samantha	Rh3AG104400 Rh3BG108100 Rh3CG109800 Rh3DG109900
rosa_wichuraiana	Rw3G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	988, 1768, 2165
AasI	GACNNNNNNGTC	1 cut(s)	87
Acc36I	ACCTGC	5 cut(s)	988, 1088, 1768, 1981, 2165
Acc65I	GGTACC	1 cut(s)	1266
AccB1I	GGYRCC	1 cut(s)	1266
AccI	GTMKAC	3 cut(s)	7, 1594, 1810
AccII	CGCG	1 cut(s)	1437
AciI	CCGC	9 cut(s)	214, 220, 298, 342, 1120, 1150, 1483, 2340, 2654
AclWI	GGATC	7 cut(s)	336, 443, 772, 1267, 1763, 1850, 2372
AcoI	YGGCCR	2 cut(s)	768, 2329
AcsI	RAATTY	1 cut(s)	427
AcuI	CTGAAG	4 cut(s)	855, 1092, 2004, 2250
AfaI	GTAC	8 cut(s)	509, 724, 1268, 1288, 1659, 2059, 2485, 2649
AfiI	CCNNNNNNNGG	9 cut(s)	77, 344, 410, 416, 1282, 1508, 1787, 1872, 2360
AflII	CTTAAG	1 cut(s)	1184
AgsI	TTSAA	7 cut(s)	455, 799, 1305, 1625, 1835, 1904, 1963
AjnI	CCWGG	3 cut(s)	337, 1269, 2091
AjuI	GAANNNNNNNTTGG	2 cut(s)	2460, 2492
Alw21I	GWGCWC	1 cut(s)	162
AlwI	GGATC	7 cut(s)	336, 443, 772, 1267, 1763, 1850, 2372
AlwNI	CAGNNNCTG	1 cut(s)	1514
Ama87I	CYCGRG	1 cut(s)	410
AoxI	GGCC	7 cut(s)	768, 789, 1308, 1874, 2067, 2329, 2612
ApeKI	GCWGC	4 cut(s)	1442, 1534, 1690, 1740
ApoI	RAATTY	1 cut(s)	427
ArsI	GACNNNNNNTTYG	4 cut(s)	1592, 1624, 2522, 2554
AseI	ATTAAT	1 cut(s)	74
Asp718I	GGTACC	1 cut(s)	1266
AspLEI	GCGC	1 cut(s)	1437
AspS9I	GGNCC	5 cut(s)	789, 1273, 1874, 1970, 2068
AsuC2I	CCSGG	4 cut(s)	38, 411, 412, 2448
AsuHPI	GGTGA	6 cut(s)	966, 1689, 1749, 1802, 2004, 2079
AvaI	CYCGRG	1 cut(s)	410
AvaII	GGWCC	2 cut(s)	1273, 1970
AxyI	CCTNAGG	1 cut(s)	1815
BaeGI	GKGCMC	1 cut(s)	411
BalI	TGGCCA	1 cut(s)	2331
BanI	GGYRCC	1 cut(s)	1266
BauI	CACGAG	1 cut(s)	2022
BbsI	GAAGAC	1 cut(s)	1842
Bbv12I	GWGCWC	1 cut(s)	162
BbvCI	CCTCAGC	2 cut(s)	198, 278
BbvI	GCAGC	4 cut(s)	1429, 1546, 1677, 1752
BccI	CCATC	8 cut(s)	409, 687, 1702, 2005, 2153, 2495, 2514, 2608
BcgI	CGANNNNNNTGC	2 cut(s)	612, 646
BciT130I	CCWGG	3 cut(s)	339, 1271, 2093
BciVI	GTATCC	2 cut(s)	1873, 2643
BclI	TGATCA	1 cut(s)	2371
BcnI	CCSGG	4 cut(s)	38, 411, 412, 2448
BfmI	CTRYAG	2 cut(s)	1350, 1383
BfrI	CTTAAG	1 cut(s)	1184
BfuAI	ACCTGC	5 cut(s)	988, 1088, 1768, 1981, 2165
BfuI	GTATCC	2 cut(s)	1873, 2643
BglI	GCCNNNNNGGC	1 cut(s)	2337
BisI	GCNGC	5 cut(s)	1443, 1535, 1691, 1741, 2654
BlsI	GCNGC	5 cut(s)	1444, 1536, 1692, 1742, 2655
Bme1390I	CCNGG	7 cut(s)	38, 339, 411, 412, 1271, 2093, 2448
Bme18I	GGWCC	2 cut(s)	1273, 1970
BmeT110I	CYCGRG	1 cut(s)	410
BmgT120I	GGNCC	5 cut(s)	789, 1273, 1874, 1970, 2068
BmiI	GGNNCC	4 cut(s)	790, 1268, 1821, 2365
BmrFI	CCNGG	7 cut(s)	38, 339, 411, 412, 1271, 2093, 2448
BmrI	ACTGGG	1 cut(s)	567
BmsI	GCATC	7 cut(s)	39, 183, 730, 752, 1739, 1807, 2089
BmuI	ACTGGG	1 cut(s)	567
BpiI	GAAGAC	1 cut(s)	1842
BpmI	CTGGAG	1 cut(s)	2187
Bpu10I	CCTNAGC	3 cut(s)	198, 278, 1431
BpuEI	CTTGAG	2 cut(s)	703, 2508
BpuMI	CCSGG	4 cut(s)	38, 411, 412, 2448
BsaBI	GATNNNNATC	2 cut(s)	333, 2376
BsaI	GGTCTC	5 cut(s)	36, 95, 379, 1441, 1956
BsaJI	CCNNGG	4 cut(s)	56, 410, 2091, 2381
Bsc4I	CCNNNNNNNGG	9 cut(s)	77, 344, 410, 416, 1282, 1508, 1787, 1872, 2360
Bse1I	ACTGG	8 cut(s)	389, 481, 562, 1859, 1924, 2365, 2367, 2503
Bse21I	CCTNAGG	1 cut(s)	1815
Bse3DI	GCAATG	2 cut(s)	237, 2332
Bse8I	GATNNNNATC	2 cut(s)	333, 2376
BseBI	CCWGG	3 cut(s)	339, 1271, 2093
BseDI	CCNNGG	4 cut(s)	56, 410, 2091, 2381
BseGI	GGATG	8 cut(s)	420, 613, 946, 1848, 2101, 2233, 2506, 2563
BseJI	GATNNNNATC	2 cut(s)	333, 2376
BseLI	CCNNNNNNNGG	9 cut(s)	77, 344, 410, 416, 1282, 1508, 1787, 1872, 2360
BseMI	GCAATG	2 cut(s)	237, 2332
BseNI	ACTGG	8 cut(s)	389, 481, 562, 1859, 1924, 2365, 2367, 2503
BseRI	GAGGAG	3 cut(s)	825, 890, 1832
BseSI	GKGCMC	1 cut(s)	411
BseXI	GCAGC	4 cut(s)	1429, 1546, 1677, 1752
BsgI	GTGCAG	1 cut(s)	1500
Bsh1236I	CGCG	1 cut(s)	1437
BshFI	GGCC	7 cut(s)	770, 791, 1310, 1876, 2069, 2331, 2614
BshNI	GGYRCC	1 cut(s)	1266
BsiHKAI	GWGCWC	1 cut(s)	162
BsiHKCI	CYCGRG	1 cut(s)	410
BsiSI	CCGG	3 cut(s)	37, 411, 2447
BslFI	GGGAC	6 cut(s)	432, 1136, 1203, 1525, 1930, 2597
BslI	CCNNNNNNNGG	9 cut(s)	77, 344, 410, 416, 1282, 1508, 1787, 1872, 2360
BsmBI	CGTCTC	1 cut(s)	1196
BsmFI	GGGAC	6 cut(s)	432, 1136, 1203, 1525, 1930, 2597
BsmI	GAATGC	2 cut(s)	232, 2567
BsnI	GGCC	7 cut(s)	770, 791, 1310, 1876, 2069, 2331, 2614
Bso31I	GGTCTC	5 cut(s)	36, 95, 379, 1441, 1956
BsoBI	CYCGRG	1 cut(s)	410
Bsp1286I	GDGCHC	2 cut(s)	162, 411
Bsp1407I	TGTACA	1 cut(s)	2647
BspACI	CCGC	9 cut(s)	214, 220, 298, 342, 1120, 1150, 1483, 2340, 2654
BspANI	GGCC	7 cut(s)	770, 791, 1310, 1876, 2069, 2331, 2614
BspFNI	CGCG	1 cut(s)	1437
BspHI	TCATGA	2 cut(s)	1801, 2374
BspLI	GGNNCC	4 cut(s)	790, 1268, 1821, 2365
BspMAI	CTGCAG	1 cut(s)	1354
BspMI	ACCTGC	5 cut(s)	988, 1088, 1768, 1981, 2165
BspPI	GGATC	7 cut(s)	336, 443, 772, 1267, 1763, 1850, 2372
BspQI	GCTCTTC	1 cut(s)	1074
BspT107I	GGYRCC	1 cut(s)	1266
BspTI	CTTAAG	1 cut(s)	1184
BspTNI	GGTCTC	5 cut(s)	36, 95, 379, 1441, 1956
BsrDI	GCAATG	2 cut(s)	237, 2332
BsrGI	TGTACA	1 cut(s)	2647
BsrI	ACTGG	8 cut(s)	389, 481, 562, 1859, 1924, 2365, 2367, 2503
BssECI	CCNNGG	4 cut(s)	56, 410, 2091, 2381
BssNAI	GTATAC	2 cut(s)	8, 1811
BssSI	CACGAG	1 cut(s)	2022
BssT1I	CCWWGG	2 cut(s)	56, 2381
Bst1107I	GTATAC	2 cut(s)	8, 1811
Bst2BI	CACGAG	1 cut(s)	2022
Bst2UI	CCWGG	3 cut(s)	339, 1271, 2093
Bst4CI	ACNGT	4 cut(s)	512, 1277, 2141, 2588
Bst6I	CTCTTC	6 cut(s)	179, 831, 836, 1074, 1130, 1406
BstAFI	CTTAAG	1 cut(s)	1184
BstAUI	TGTACA	1 cut(s)	2647
BstC8I	GCNNGC	4 cut(s)	658, 662, 823, 2082
BstF5I	GGATG	8 cut(s)	420, 613, 946, 1848, 2101, 2233, 2506, 2563
BstFNI	CGCG	1 cut(s)	1437
BstHHI	GCGC	1 cut(s)	1437
BstMWI	GCNNNNNNNGC	3 cut(s)	1349, 2187, 2337
BstNI	CCWGG	3 cut(s)	339, 1271, 2093
BstNSI	RCATGY	1 cut(s)	2084
BstSCI	CCNGG	7 cut(s)	36, 337, 409, 410, 1269, 2091, 2446
BstSFI	CTRYAG	2 cut(s)	1350, 1383
BstSLI	GKGCMC	1 cut(s)	411
BstUI	CGCG	1 cut(s)	1437
BstV1I	GCAGC	4 cut(s)	1429, 1546, 1677, 1752
BstV2I	GAAGAC	1 cut(s)	1842
BstX2I	RGATCY	1 cut(s)	1259
BstYI	RGATCY	1 cut(s)	1259
BstZ17I	GTATAC	2 cut(s)	8, 1811
Bsu36I	CCTNAGG	1 cut(s)	1815
BsuI	GTATCC	2 cut(s)	1873, 2643
BsuRI	GGCC	7 cut(s)	770, 791, 1310, 1876, 2069, 2331, 2614
BtsCI	GGATG	8 cut(s)	420, 613, 946, 1848, 2101, 2233, 2506, 2563
BtsI	GCAGTG	2 cut(s)	598, 1359
BtsIMutI	CAGTG	3 cut(s)	598, 1359, 2374
BveI	ACCTGC	5 cut(s)	988, 1088, 1768, 1981, 2165
Cac8I	GCNNGC	4 cut(s)	658, 662, 823, 2082
CaiI	CAGNNNCTG	1 cut(s)	1514
CciI	TCATGA	2 cut(s)	1801, 2374
CfoI	GCGC	1 cut(s)	1437
Cfr13I	GGNCC	5 cut(s)	789, 1273, 1874, 1970, 2068
Cfr9I	CCCGGG	1 cut(s)	410
Csp6I	GTAC	8 cut(s)	508, 723, 1267, 1287, 1658, 2058, 2484, 2648
CspCI	CAANNNNNGTGG	2 cut(s)	897, 932
CviAII	CATG	7 cut(s)	1391, 1530, 1802, 1842, 1912, 2081, 2375
CviQI	GTAC	8 cut(s)	508, 723, 1267, 1287, 1658, 2058, 2484, 2648
DrdI	GACNNNNNNGTC	1 cut(s)	87
DseDI	GACNNNNNNGTC	1 cut(s)	87
EaeI	YGGCCR	2 cut(s)	768, 2329
Eam1104I	CTCTTC	6 cut(s)	179, 831, 836, 1074, 1130, 1406
EarI	CTCTTC	6 cut(s)	179, 831, 836, 1074, 1130, 1406
EciI	GGCGGA	1 cut(s)	2355
Eco130I	CCWWGG	2 cut(s)	56, 2381
Eco147I	AGGCCT	2 cut(s)	1310, 2614
Eco31I	GGTCTC	5 cut(s)	36, 95, 379, 1441, 1956
Eco47I	GGWCC	2 cut(s)	1273, 1970
Eco57I	CTGAAG	4 cut(s)	855, 1092, 2004, 2250
Eco81I	CCTNAGG	1 cut(s)	1815
Eco88I	CYCGRG	1 cut(s)	410
EcoRI	GAATTC	1 cut(s)	427
EcoRII	CCWGG	3 cut(s)	337, 1269, 2091
EcoT14I	CCWWGG	2 cut(s)	56, 2381
EcoT22I	ATGCAT	2 cut(s)	745, 2082
ErhI	CCWWGG	2 cut(s)	56, 2381
Esp3I	CGTCTC	1 cut(s)	1196
FaeI	CATG	7 cut(s)	1394, 1533, 1805, 1845, 1915, 2084, 2378
FalI	AAGNNNNNCTT	4 cut(s)	1109, 1141, 1403, 1435
FaqI	GGGAC	6 cut(s)	432, 1136, 1203, 1525, 1930, 2597
FatI	CATG	7 cut(s)	1390, 1529, 1801, 1841, 1911, 2080, 2374
FauI	CCCGC	2 cut(s)	207, 1113
FauNDI	CATATG	1 cut(s)	375
FbaI	TGATCA	1 cut(s)	2371
FblI	GTMKAC	3 cut(s)	7, 1594, 1810
Fnu4HI	GCNGC	5 cut(s)	1443, 1535, 1691, 1741, 2654
FokI	GGATG	8 cut(s)	427, 620, 953, 1835, 2108, 2240, 2493, 2570
Fsp4HI	GCNGC	5 cut(s)	1443, 1535, 1691, 1741, 2654
GlaI	GCGC	1 cut(s)	1436
GluI	GCNGC	5 cut(s)	1443, 1535, 1691, 1741, 2654
GsuI	CTGGAG	1 cut(s)	2187
HaeIII	GGCC	7 cut(s)	770, 791, 1310, 1876, 2069, 2331, 2614
HapII	CCGG	3 cut(s)	37, 411, 2447
HhaI	GCGC	1 cut(s)	1437
Hin1II	CATG	7 cut(s)	1394, 1533, 1805, 1845, 1915, 2084, 2378
Hin6I	GCGC	1 cut(s)	1435
HinP1I	GCGC	1 cut(s)	1435
HincII	GTYRAC	1 cut(s)	2415
HindII	GTYRAC	1 cut(s)	2415
HindIII	AAGCTT	1 cut(s)	707
HinfI	GANTC	9 cut(s)	19, 141, 316, 334, 420, 518, 1886, 2009, 2305
HpaII	CCGG	3 cut(s)	37, 411, 2447
HphI	GGTGA	6 cut(s)	966, 1689, 1749, 1802, 2004, 2079
Hpy166II	GTNNAC	9 cut(s)	8, 1112, 1480, 1492, 1545, 1595, 1811, 1990, 2415
Hpy188III	TCNNGA	8 cut(s)	424, 515, 682, 1802, 2022, 2156, 2204, 2375
Hpy8I	GTNNAC	9 cut(s)	8, 1112, 1480, 1492, 1545, 1595, 1811, 1990, 2415
HpyAV	CCTTC	8 cut(s)	459, 856, 1026, 1036, 1575, 1787, 2253, 2566
HpyCH4III	ACNGT	4 cut(s)	512, 1277, 2141, 2588
HpyCH4IV	ACGT	3 cut(s)	961, 1807, 2123
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1349, 2187, 2337
HpySE526I	ACGT	3 cut(s)	961, 1807, 2123
Hsp92II	CATG	7 cut(s)	1394, 1533, 1805, 1845, 1915, 2084, 2378
HspAI	GCGC	1 cut(s)	1435
KpnI	GGTACC	1 cut(s)	1270
Ksp22I	TGATCA	1 cut(s)	2371
LguI	GCTCTTC	1 cut(s)	1074
LmnI	GCTCC	3 cut(s)	588, 865, 1819
Lsp1109I	GCAGC	4 cut(s)	1429, 1546, 1677, 1752
LweI	GCATC	7 cut(s)	39, 183, 730, 752, 1739, 1807, 2089
MaeII	ACGT	3 cut(s)	961, 1807, 2123
MaeIII	GTNAC	8 cut(s)	166, 1354, 1844, 1887, 2010, 2019, 2153, 2356
MfeI	CAATTG	4 cut(s)	1538, 1764, 1904, 2004
MflI	RGATCY	1 cut(s)	1259
MhlI	GDGCHC	2 cut(s)	162, 411
MlsI	TGGCCA	1 cut(s)	2331
MluNI	TGGCCA	1 cut(s)	2331
MlyI	GAGTC	5 cut(s)	135, 310, 414, 1895, 2018
MmeI	TCCRAC	3 cut(s)	442, 504, 2572
Mox20I	TGGCCA	1 cut(s)	2331
Mph1103I	ATGCAT	2 cut(s)	745, 2082
MscI	TGGCCA	1 cut(s)	2331
MseI	TTAA	4 cut(s)	74, 648, 1185, 1296
MslI	CAYNNNNRTG	2 cut(s)	443, 1401
Msp20I	TGGCCA	1 cut(s)	2331
MspCI	CTTAAG	1 cut(s)	1184
MspI	CCGG	3 cut(s)	37, 411, 2447
MspR9I	CCNGG	7 cut(s)	38, 339, 411, 412, 1271, 2093, 2448
MunI	CAATTG	4 cut(s)	1538, 1764, 1904, 2004
Mva1269I	GAATGC	2 cut(s)	232, 2567
MvaI	CCWGG	3 cut(s)	339, 1271, 2093
MvnI	CGCG	1 cut(s)	1437
MwoI	GCNNNNNNNGC	3 cut(s)	1349, 2187, 2337
NciI	CCSGG	4 cut(s)	38, 411, 412, 2448
NdeI	CATATG	1 cut(s)	375
NlaIII	CATG	7 cut(s)	1394, 1533, 1805, 1845, 1915, 2084, 2378
NlaIV	GGNNCC	4 cut(s)	790, 1268, 1821, 2365
NmuCI	GTSAC	5 cut(s)	1354, 1887, 2010, 2019, 2153
NsiI	ATGCAT	2 cut(s)	745, 2082
NspI	RCATGY	1 cut(s)	2084
PaeI	GCATGC	1 cut(s)	2084
PagI	TCATGA	2 cut(s)	1801, 2374
PaqCI	CACCTGC	3 cut(s)	988, 1768, 2165
PceI	AGGCCT	2 cut(s)	1310, 2614
PciSI	GCTCTTC	1 cut(s)	1074
PctI	GAATGC	2 cut(s)	232, 2567
PfeI	GAWTC	4 cut(s)	19, 334, 518, 2305
PkrI	GCNGC	5 cut(s)	1444, 1536, 1692, 1742, 2655
PleI	GAGTC	5 cut(s)	135, 310, 414, 1894, 2017
PpsI	GAGTC	5 cut(s)	135, 310, 414, 1894, 2017
PshBI	ATTAAT	1 cut(s)	74
Psp6I	CCWGG	3 cut(s)	337, 1269, 2091
PspGI	CCWGG	3 cut(s)	337, 1269, 2091
PspN4I	GGNNCC	4 cut(s)	790, 1268, 1821, 2365
PspPI	GGNCC	5 cut(s)	789, 1273, 1874, 1970, 2068
PstI	CTGCAG	1 cut(s)	1354
PstNI	CAGNNNCTG	1 cut(s)	1514
PsuI	RGATCY	1 cut(s)	1259
RsaI	GTAC	8 cut(s)	509, 724, 1268, 1288, 1659, 2059, 2485, 2649
RsaNI	GTAC	8 cut(s)	508, 723, 1267, 1287, 1658, 2058, 2484, 2648
RseI	CAYNNNNRTG	2 cut(s)	443, 1401
SapI	GCTCTTC	1 cut(s)	1074
SaqAI	TTAA	4 cut(s)	74, 648, 1185, 1296
SatI	GCNGC	5 cut(s)	1443, 1535, 1691, 1741, 2654
Sau96I	GGNCC	5 cut(s)	789, 1273, 1874, 1970, 2068
SchI	GAGTC	5 cut(s)	135, 310, 414, 1895, 2018
ScrFI	CCNGG	7 cut(s)	38, 339, 411, 412, 1271, 2093, 2448
SduI	GDGCHC	2 cut(s)	162, 411
SfaNI	GCATC	7 cut(s)	39, 183, 730, 752, 1739, 1807, 2089
SfcI	CTRYAG	2 cut(s)	1350, 1383
SinI	GGWCC	2 cut(s)	1273, 1970
SmaI	CCCGGG	1 cut(s)	412
SmiMI	CAYNNNNRTG	2 cut(s)	443, 1401
SmlI	CTYRAG	3 cut(s)	682, 1184, 2523
SmoI	CTYRAG	3 cut(s)	682, 1184, 2523
SphI	GCATGC	1 cut(s)	2084
SseBI	AGGCCT	2 cut(s)	1310, 2614
SsiI	CCGC	9 cut(s)	214, 220, 298, 342, 1120, 1150, 1483, 2340, 2654
StuI	AGGCCT	2 cut(s)	1310, 2614
StyD4I	CCNGG	7 cut(s)	36, 337, 409, 410, 1269, 2091, 2446
StyI	CCWWGG	2 cut(s)	56, 2381
TaaI	ACNGT	4 cut(s)	512, 1277, 2141, 2588
TaiI	ACGT	3 cut(s)	964, 1810, 2126
TaqI	TCGA	3 cut(s)	304, 425, 503
TatI	WGTACW	3 cut(s)	722, 1657, 2647
TauI	GCSGC	1 cut(s)	2656
TfiI	GAWTC	4 cut(s)	19, 334, 518, 2305
Tru1I	TTAA	4 cut(s)	74, 648, 1185, 1296
Tru9I	TTAA	4 cut(s)	74, 648, 1185, 1296
TscAI	CASTG	3 cut(s)	598, 1359, 2374
TseFI	GTSAC	5 cut(s)	1354, 1887, 2010, 2019, 2153
TseI	GCWGC	4 cut(s)	1442, 1534, 1690, 1740
Tsp45I	GTSAC	5 cut(s)	1354, 1887, 2010, 2019, 2153
TspDTI	ATGAA	8 cut(s)	1215, 1472, 1542, 1557, 1818, 2235, 2481, 2574
TspGWI	ACGGA	3 cut(s)	309, 1549, 2559
TspMI	CCCGGG	1 cut(s)	410
TspRI	CASTG	3 cut(s)	598, 1359, 2374
Vha464I	CTTAAG	1 cut(s)	1184
VpaK11BI	GGWCC	2 cut(s)	1273, 1970
VspI	ATTAAT	1 cut(s)	74
XapI	RAATTY	1 cut(s)	427
XceI	RCATGY	1 cut(s)	2084
XmaI	CCCGGG	1 cut(s)	410
XmiI	GTMKAC	3 cut(s)	7, 1594, 1810
Zsp2I	ATGCAT	2 cut(s)	745, 2082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.