Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0005401

Physical Location & Seq

Genomic Coordinates Reverse (-)

19739720 .. 19743592

Gene Structure 3873 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g17380.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGTGTATACTTTGTGTGATTCAGAAGTGGTCTCGCCGGGTTGCTACAATGCTTCCTTGGTTAGTTATTCCATTAATAGGACTGTGGGGTCTCTCTCAGCTTCTACCACCAGCTTTCCGATTTGAGATAACTTCGCCTAGACTCGCTTGTGTTGTTGTGCTCTTGGTTACTCTCTTCTGGTATGAGGTTTTGATGCCTCAGCTTTCAGCTTGGCGCGTGCGGAGGAATGCAATGCTTAGAGAGAGGAAAAGGTTTGAGGCAATAGAGTTGCAAAAGCTGAGGAAAACAGCAACAAGGCGGTGTCGAAACTGCTCGACACCATATAGGGATCAGAATCCTGGTGGTGGTCGGTTTATGTGTTCGTATTGTGGGCATTTATCAAAGAGACCGGTTTTGGACTTACCTGAGGTACCCGGGATGGGACTTTCGAAGTCTGGGATCATCAAAGATTTAGTTGGAAAGGGTGGAAAGATATTGAATGGAAAGGCGTGGTCTGAAAATGGGTGGATGCAAGGTCAAGATTGGTCGGAGAATGGAAATTGGGTCAATAGTTCTGTTGGAGGAAAGTCTAGTTATTGGAGAAAGGATGGGAGCAGTGTTTTTGGAGGGGATGAGAGTTGTTTGGCAGAGAAGTCATATTCAGGTGTTGTTAATTTTGCTTGCAAGCTACTAACCTTTTTTTTCTTGAGTGTTAGATGGCTTTGGAGAAAGCTTTTTAGTAGTAGTACATCAGATGATGCATCTGACGGAGATCGTAAAGGATTGGCCAAGAGGGGCGAGAATGGGGCCAACTTGAATGAAAGTAGAGGAGAAAAGGCCCGCAGAAAAGCTGAAGAGAAGAGACTGGCTAAGATAGAGAAGGAGCTTTTGGAGGAGGAAGAAAGAAAGCAGAGGGAGGAAGTTGCAAGGTTGGTGGAGGAACGCAGGAGACTTAGGGATGAGAAAAAGGAAGCTGAGCATGGGAAATCATCACCACCTGTGAGGGAAAAAGATACTAAGAAGGAAGCAGAAAAGAAACGACAGGAAAGAAGGAAAGAGAAAGACAAGGGTTCTAGCAAGAGCAACTCTGATGCAGAAGAGCTGGAAAAGAGAGCAGGTAAGGAAAGTGAACGAAAGCGGGACCTTGACAAGAAGAGTGACATTGACCGCCGGGAACATCTGAAATCAGGGGCAGATTTTCTTAAGGGACAAAGCACAGAGATGGGGCATAATATTAAAAATGCATCTGCAAACAATTTTATTCAGGGAAATGCTGGATCTAGGTACCTGGACCGCATGAGGGGTACGATTTTTAATTCTTCAAAGGCATTTGGTGGAGGTAGTTTCTTTGTAAAGGATGCTAATGCTACAATGACAAAAGAAACCAAATCTAGCAGTTCTGTAGATCATGTCCATAGTTATGCCCAGAAGAGAGACTTATGTCCACCTGAGCGCGTAGCTGCAAGACCTTTTATTAATGGAGATGATAAGAGTGTCCACCGCCCTGTTCACTCAGAACCACAGTCAGGGACTGCACCTAAAAAATCATGGCAGCAGTTGTTTACTCGTTCATCGCCAGTGCCTTCATCATCAAGTGTAAATGTAATAAGTAGACCAAATGCAAAGTCTCAGACAAAAGTTCAAAGTCCTCAGTTATCTGGCCAGTCGTCGTCAATCCAATCATTCGATAATCCAATCAACTTTGGGCTGCCATCACCATTCGCTTTATCTACTACCTATCCAAAAGGATCGACTAGCAGCAGTTTAGGTTTTTCACCTGCAATTGATCCCATATTTCCTCGCATTGGGGAAGGACATCATGAACTTATACCTGAGGAGCCAGAGCTTTTTGAAGACCCATGTTACGTCCCTGATCCAGTATCCTTGCTTGGGCCAGTTTCTGAGTCACTTGATAATTTTCAATTAAACATGGGATTGGAGAGGCCTCGCACTTTGAAGAATGGACCTGCTTCATCTGAAATGAACAAGCCATCTCCAATTGAGTCACCAATGTCGCGAGAAAAGCTTAATAATTCTAGTCGCTTCCCAAGTACCCCAAAGGCCCATGATATGCATGCTTACCCCTTGGATGATGCAAGTGCAAATGATAAGGGAACATGGCAAATGTGGAACAGTTGCCCTCTTGGTCAGGAAGGTCTAGGTTTTGCAGGTGGCTCTCCAAGCTGGTTTCTACCTCCAGAACTGAACAGATCAAACAAGGATGATCTTTTGCACCCGTCATCAGTATCACTGTTTACTACAGAAGATCAGGTTGTTTCTGGCTCTCAATCTCCTAAGAATCAGAGAATTTTCCTTGGAAATGGCCAGAATGGCGGAACCTTTAGCCCTGTTACTGGTTCCGGTGATCATGATCCTTGGTTGCAGAAAGCCTTTTTTCCTCCATTGTCAACAGCTGAAAACCATTTTCATCTGAGACCTCCAGATGAAACTTCGAAGAATGAACTGATTTTTGGGAGTCCCATCAGAGCTACTGGGAACCATCCATTTGAGCTGCCTCAAGCGAATGGTTGGTCCGAGAGAAAGGAATGGGATGAATGCGCTGTGACGGGAGCAGGGGACGGTGTTGGAAAGCCATATGTGTTGAGGCCTCCTGTCAGGGGTCTGTATCCCACCCCGAATCCGAATGTACAGCCGCTTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

881

Amino Acids

98.13

Weight (kDa)

9.28

Isoelectric Point (pI)

58.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51640 AT3G51640 AT3G51640 AT3G51650 AT3G51650 AT3G51650 AT3G51650
fragaria_vesca	FvH4_6g10170 FvH4_6g10170 FvH4_6g10170
malus_domestica	MD04G1172000.v1.1 MD12G1185300.v1.1
prunus_persica	Prupe.6G290600_v2.0.a1 Prupe.6G290600_v2.0.a1
pyrus_communis	pycom04g15200 pycom12g17380
rosa_chinensis	RchiOBHm_Chr3g0460911
rosa_laevigata	RLG00000024966
rosa_multiflora	Rmu_sc0008258.1_g000012 Rmu_sc0021377.1_g000004
rosa_roxburghii	Rroxscaffold_6G00419040
rosa_rugosa	Rorug03G0047000 Rorug03G0047000 Rorug03G0047000
rosa_samantha	Rh3AG104400 Rh3BG108100 Rh3CG109800 Rh3DG109900
rosa_wichuraiana	Rw3G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1765, 2138
AasI	GACNNNNNNGTC	1 cut(s)	87
Acc36I	ACCTGC	4 cut(s)	1085, 1765, 1954, 2138
Acc65I	GGTACC	2 cut(s)	409, 1263
AccB1I	GGYRCC	2 cut(s)	409, 1263
AccI	GTMKAC	2 cut(s)	7, 1591
AccII	CGCG	3 cut(s)	216, 1434, 1996
AciI	CCGC	9 cut(s)	220, 298, 820, 1117, 1147, 1273, 1480, 2313, 2633
AclWI	GGATC	7 cut(s)	336, 446, 1264, 1735, 1760, 1847, 2345
AcoI	YGGCCR	3 cut(s)	765, 1639, 2302
AcsI	RAATTY	1 cut(s)	2286
AcuI	CTGAAG	1 cut(s)	852
AfaI	GTAC	6 cut(s)	411, 727, 1265, 1285, 2032, 2628
AfiI	CCNNNNNNNGG	9 cut(s)	77, 344, 419, 1279, 1505, 1784, 1869, 2333, 2597
AflII	CTTAAG	1 cut(s)	1181
AgeI	ACCGGT	1 cut(s)	388
AgsI	TTSAA	7 cut(s)	478, 796, 1302, 1622, 1832, 1901, 1936
AjnI	CCWGG	2 cut(s)	337, 1266
AjuI	GAANNNNNNNTTGG	4 cut(s)	851, 883, 2433, 2465
Alw21I	GWGCWC	1 cut(s)	162
Alw26I	GTCTC	8 cut(s)	36, 95, 379, 835, 922, 1407, 1611, 2407
AlwI	GGATC	7 cut(s)	336, 446, 1264, 1735, 1760, 1847, 2345
AlwNI	CAGNNNCTG	2 cut(s)	1511, 1880
Ama87I	CYCGRG	1 cut(s)	413
AoxI	GGCC	9 cut(s)	765, 786, 816, 1639, 1871, 1922, 2040, 2302, 2585
ApeKI	GCWGC	5 cut(s)	1439, 1531, 1687, 1737, 2491
ApoI	RAATTY	1 cut(s)	2286
ArsI	GACNNNNNNTTYG	4 cut(s)	1589, 1621, 2495, 2527
AseI	ATTAAT	2 cut(s)	74, 1455
AsiGI	ACCGGT	1 cut(s)	388
Asp718I	GGTACC	2 cut(s)	409, 1263
AspLEI	GCGC	3 cut(s)	216, 1434, 2540
AspS9I	GGNCC	8 cut(s)	786, 817, 1120, 1270, 1871, 1943, 2041, 2511
AsuC2I	CCSGG	4 cut(s)	38, 414, 415, 1151
AsuHPI	GGTGA	5 cut(s)	963, 1686, 1746, 1977, 2354
AsuII	TTCGAA	2 cut(s)	428, 2432
AvaI	CYCGRG	1 cut(s)	413
AvaII	GGWCC	4 cut(s)	1120, 1270, 1943, 2511
AxyI	CCTNAGG	2 cut(s)	405, 1812
BalI	TGGCCA	3 cut(s)	767, 1641, 2304
BanI	GGYRCC	2 cut(s)	409, 1263
BbsI	GAAGAC	1 cut(s)	1839
Bbv12I	GWGCWC	1 cut(s)	162
BbvCI	CCTCAGC	2 cut(s)	198, 278
BbvI	GCAGC	5 cut(s)	1426, 1543, 1674, 1749, 2478
BccI	CCATC	8 cut(s)	412, 581, 690, 1195, 1699, 1978, 2468, 2487
BciT130I	CCWGG	2 cut(s)	339, 1268
BciVI	GTATCC	2 cut(s)	1870, 2616
BclI	TGATCA	1 cut(s)	2344
BcnI	CCSGG	4 cut(s)	38, 414, 415, 1151
BcoDI	GTCTC	8 cut(s)	36, 95, 379, 835, 922, 1407, 1611, 2407
BfaI	CTAG	8 cut(s)	138, 570, 1053, 1260, 1371, 1734, 2016, 2138
BfmI	CTRYAG	2 cut(s)	1380, 2238
BfrI	CTTAAG	1 cut(s)	1181
BfuAI	ACCTGC	4 cut(s)	1085, 1765, 1954, 2138
BfuI	GTATCC	2 cut(s)	1870, 2616
BglI	GCCNNNNNGGC	1 cut(s)	2310
BisI	GCNGC	6 cut(s)	1440, 1532, 1688, 1738, 2492, 2633
BlpI	GCTNAGC	1 cut(s)	954
BlsI	GCNGC	6 cut(s)	1441, 1533, 1689, 1739, 2493, 2634
Bme1390I	CCNGG	6 cut(s)	38, 339, 414, 415, 1151, 1268
Bme18I	GGWCC	4 cut(s)	1120, 1270, 1943, 2511
BmeT110I	CYCGRG	1 cut(s)	413
BmgT120I	GGNCC	8 cut(s)	786, 817, 1120, 1270, 1871, 1943, 2041, 2511
BmiI	GGNNCC	8 cut(s)	411, 787, 1121, 1265, 1818, 2317, 2338, 2477
BmrFI	CCNGG	6 cut(s)	38, 339, 414, 415, 1151, 1268
BmrI	ACTGGG	1 cut(s)	2481
BmsI	GCATC	8 cut(s)	183, 498, 727, 749, 1060, 1232, 1327, 2062
BmuI	ACTGGG	1 cut(s)	2481
BoxI	GACNNNNGTC	1 cut(s)	1419
BpiI	GAAGAC	1 cut(s)	1839
BpmI	CTGGAG	2 cut(s)	2160, 2403
Bpu10I	CCTNAGC	3 cut(s)	198, 278, 1428
Bpu1102I	GCTNAGC	1 cut(s)	954
Bpu14I	TTCGAA	2 cut(s)	428, 2432
BpuEI	CTTGAG	2 cut(s)	706, 2481
BpuMI	CCSGG	4 cut(s)	38, 414, 415, 1151
BsaBI	GATNNNNATC	2 cut(s)	333, 2349
BsaI	GGTCTC	4 cut(s)	36, 95, 379, 2407
BsaJI	CCNNGG	5 cut(s)	56, 413, 2064, 2293, 2354
BsaWI	WCCGGW	2 cut(s)	388, 2339
Bsc4I	CCNNNNNNNGG	9 cut(s)	77, 344, 419, 1279, 1505, 1784, 1869, 2333, 2597
Bse118I	RCCGGY	1 cut(s)	388
Bse1I	ACTGG	7 cut(s)	849, 1556, 1642, 1856, 1874, 2338, 2476
Bse21I	CCTNAGG	2 cut(s)	405, 1812
Bse3DI	GCAATG	1 cut(s)	237
Bse8I	GATNNNNATC	2 cut(s)	333, 2349
BseBI	CCWGG	2 cut(s)	339, 1268
BseDI	CCNNGG	5 cut(s)	56, 413, 2064, 2293, 2354
BseJI	GATNNNNATC	2 cut(s)	333, 2349
BseLI	CCNNNNNNNGG	9 cut(s)	77, 344, 419, 1279, 1505, 1784, 1869, 2333, 2597
BseMI	GCAATG	1 cut(s)	237
BseNI	ACTGG	7 cut(s)	849, 1556, 1642, 1856, 1874, 2338, 2476
BseRI	GAGGAG	3 cut(s)	822, 887, 1829
BseXI	GCAGC	5 cut(s)	1426, 1543, 1674, 1749, 2478
BsgI	GTGCAG	1 cut(s)	1497
Bsh1236I	CGCG	3 cut(s)	216, 1434, 1996
BshFI	GGCC	9 cut(s)	767, 788, 818, 1641, 1873, 1924, 2042, 2304, 2587
BshNI	GGYRCC	2 cut(s)	409, 1263
BshTI	ACCGGT	1 cut(s)	388
BsiHKAI	GWGCWC	1 cut(s)	162
BsiHKCI	CYCGRG	1 cut(s)	413
BsiSI	CCGG	5 cut(s)	37, 389, 414, 1150, 2340
BslFI	GGGAC	7 cut(s)	435, 1133, 1200, 1522, 1832, 2442, 2570
BslI	CCNNNNNNNGG	9 cut(s)	77, 344, 419, 1279, 1505, 1784, 1869, 2333, 2597
BsmAI	GTCTC	8 cut(s)	36, 95, 379, 835, 922, 1407, 1611, 2407
BsmFI	GGGAC	7 cut(s)	435, 1133, 1200, 1522, 1832, 2442, 2570
BsmI	GAATGC	2 cut(s)	232, 2540
BsnI	GGCC	9 cut(s)	767, 788, 818, 1641, 1873, 1924, 2042, 2304, 2587
Bso31I	GGTCTC	4 cut(s)	36, 95, 379, 2407
BsoBI	CYCGRG	1 cut(s)	413
Bsp119I	TTCGAA	2 cut(s)	428, 2432
Bsp1286I	GDGCHC	1 cut(s)	162
Bsp1407I	TGTACA	1 cut(s)	2626
Bsp1720I	GCTNAGC	1 cut(s)	954
Bsp68I	TCGCGA	1 cut(s)	1996
BspACI	CCGC	9 cut(s)	220, 298, 820, 1117, 1147, 1273, 1480, 2313, 2633
BspANI	GGCC	9 cut(s)	767, 788, 818, 1641, 1873, 1924, 2042, 2304, 2587
BspFNI	CGCG	3 cut(s)	216, 1434, 1996
BspHI	TCATGA	2 cut(s)	1798, 2347
BspLI	GGNNCC	8 cut(s)	411, 787, 1121, 1265, 1818, 2317, 2338, 2477
BspMI	ACCTGC	4 cut(s)	1085, 1765, 1954, 2138
BspPI	GGATC	7 cut(s)	336, 446, 1264, 1735, 1760, 1847, 2345
BspQI	GCTCTTC	1 cut(s)	1071
BspT104I	TTCGAA	2 cut(s)	428, 2432
BspT107I	GGYRCC	2 cut(s)	409, 1263
BspTI	CTTAAG	1 cut(s)	1181
BspTNI	GGTCTC	4 cut(s)	36, 95, 379, 2407
BsrDI	GCAATG	1 cut(s)	237
BsrFI	RCCGGY	1 cut(s)	388
BsrGI	TGTACA	1 cut(s)	2626
BsrI	ACTGG	7 cut(s)	849, 1556, 1642, 1856, 1874, 2338, 2476
BssAI	RCCGGY	1 cut(s)	388
BssECI	CCNNGG	5 cut(s)	56, 413, 2064, 2293, 2354
BssNAI	GTATAC	1 cut(s)	8
BssT1I	CCWWGG	4 cut(s)	56, 2064, 2293, 2354
Bst1107I	GTATAC	1 cut(s)	8
Bst2UI	CCWGG	2 cut(s)	339, 1268
Bst4CI	ACNGT	5 cut(s)	84, 1503, 2114, 2232, 2561
Bst6I	CTCTTC	6 cut(s)	179, 828, 833, 1071, 1127, 1403
BstAFI	CTTAAG	1 cut(s)	1181
BstAUI	TGTACA	1 cut(s)	2626
BstBI	TTCGAA	2 cut(s)	428, 2432
BstC8I	GCNNGC	5 cut(s)	218, 661, 665, 820, 2055
BstFNI	CGCG	3 cut(s)	216, 1434, 1996
BstHHI	GCGC	3 cut(s)	216, 1434, 2540
BstMAI	GTCTC	8 cut(s)	36, 95, 379, 835, 922, 1407, 1611, 2407
BstMWI	GCNNNNNNNGC	3 cut(s)	2002, 2160, 2310
BstNI	CCWGG	2 cut(s)	339, 1268
BstNSI	RCATGY	1 cut(s)	2057
BstPAI	GACNNNNGTC	1 cut(s)	1419
BstSCI	CCNGG	6 cut(s)	36, 337, 412, 413, 1149, 1266
BstSFI	CTRYAG	2 cut(s)	1380, 2238
BstUI	CGCG	3 cut(s)	216, 1434, 1996
BstV1I	GCAGC	5 cut(s)	1426, 1543, 1674, 1749, 2478
BstV2I	GAAGAC	1 cut(s)	1839
BstX2I	RGATCY	1 cut(s)	1256
BstYI	RGATCY	1 cut(s)	1256
BstZ17I	GTATAC	1 cut(s)	8
Bsu36I	CCTNAGG	2 cut(s)	405, 1812
BsuI	GTATCC	2 cut(s)	1870, 2616
BsuRI	GGCC	9 cut(s)	767, 788, 818, 1641, 1873, 1924, 2042, 2304, 2587
BtgZI	GCGATG	1 cut(s)	1536
BtsI	GCAGTG	1 cut(s)	601
BtsIMutI	CAGTG	3 cut(s)	601, 1563, 2228
BtuMI	TCGCGA	1 cut(s)	1996
BveI	ACCTGC	4 cut(s)	1085, 1765, 1954, 2138
Cac8I	GCNNGC	5 cut(s)	218, 661, 665, 820, 2055
CaiI	CAGNNNCTG	2 cut(s)	1511, 1880
CciI	TCATGA	2 cut(s)	1798, 2347
CfoI	GCGC	3 cut(s)	216, 1434, 2540
Cfr10I	RCCGGY	1 cut(s)	388
Cfr13I	GGNCC	8 cut(s)	786, 817, 1120, 1270, 1871, 1943, 2041, 2511
Cfr9I	CCCGGG	1 cut(s)	413
Csp6I	GTAC	6 cut(s)	410, 726, 1264, 1284, 2031, 2627
CspAI	ACCGGT	1 cut(s)	388
CspCI	CAANNNNNGTGG	2 cut(s)	894, 929
CviQI	GTAC	6 cut(s)	410, 726, 1264, 1284, 2031, 2627
DrdI	GACNNNNNNGTC	1 cut(s)	87
DseDI	GACNNNNNNGTC	1 cut(s)	87
EaeI	YGGCCR	3 cut(s)	765, 1639, 2302
Eam1104I	CTCTTC	6 cut(s)	179, 828, 833, 1071, 1127, 1403
EarI	CTCTTC	6 cut(s)	179, 828, 833, 1071, 1127, 1403
EciI	GGCGGA	1 cut(s)	2328
Eco130I	CCWWGG	4 cut(s)	56, 2064, 2293, 2354
Eco147I	AGGCCT	2 cut(s)	1924, 2587
Eco31I	GGTCTC	4 cut(s)	36, 95, 379, 2407
Eco47I	GGWCC	4 cut(s)	1120, 1270, 1943, 2511
Eco57I	CTGAAG	1 cut(s)	852
Eco81I	CCTNAGG	2 cut(s)	405, 1812
Eco88I	CYCGRG	1 cut(s)	413
EcoO109I	RGGNCCY	1 cut(s)	1120
EcoRII	CCWGG	2 cut(s)	337, 1266
EcoT14I	CCWWGG	4 cut(s)	56, 2064, 2293, 2354
EcoT22I	ATGCAT	3 cut(s)	742, 1225, 2055
ErhI	CCWWGG	4 cut(s)	56, 2064, 2293, 2354
FalI	AAGNNNNNCTT	2 cut(s)	1400, 1432
FaqI	GGGAC	7 cut(s)	435, 1133, 1200, 1522, 1832, 2442, 2570
FauI	CCCGC	2 cut(s)	827, 1110
FauNDI	CATATG	1 cut(s)	2575
FbaI	TGATCA	1 cut(s)	2344
FblI	GTMKAC	2 cut(s)	7, 1591
Fnu4HI	GCNGC	6 cut(s)	1440, 1532, 1688, 1738, 2492, 2633
Fsp4HI	GCNGC	6 cut(s)	1440, 1532, 1688, 1738, 2492, 2633
FspBI	CTAG	8 cut(s)	138, 570, 1053, 1260, 1371, 1734, 2016, 2138
GlaI	GCGC	3 cut(s)	215, 1433, 2539
GluI	GCNGC	6 cut(s)	1440, 1532, 1688, 1738, 2492, 2633
GsuI	CTGGAG	2 cut(s)	2160, 2403
HaeIII	GGCC	9 cut(s)	767, 788, 818, 1641, 1873, 1924, 2042, 2304, 2587
HapII	CCGG	5 cut(s)	37, 389, 414, 1150, 2340
HhaI	GCGC	3 cut(s)	216, 1434, 2540
Hin6I	GCGC	3 cut(s)	214, 1432, 2538
HinP1I	GCGC	3 cut(s)	214, 1432, 2538
HincII	GTYRAC	1 cut(s)	2388
HindII	GTYRAC	1 cut(s)	2388
HindIII	AAGCTT	2 cut(s)	710, 2003
HinfI	GANTC	8 cut(s)	19, 141, 334, 1883, 1982, 2278, 2455, 2617
HpaII	CCGG	5 cut(s)	37, 389, 414, 1150, 2340
HphI	GGTGA	5 cut(s)	963, 1686, 1746, 1977, 2354
Hpy166II	GTNNAC	9 cut(s)	8, 1109, 1424, 1477, 1489, 1542, 1592, 2235, 2388
Hpy188III	TCNNGA	8 cut(s)	518, 685, 1799, 1995, 2129, 2177, 2348, 2420
Hpy8I	GTNNAC	9 cut(s)	8, 1109, 1424, 1477, 1489, 1542, 1592, 2235, 2388
Hpy99I	CGWCG	1 cut(s)	1651
HpyAV	CCTTC	6 cut(s)	853, 994, 1023, 1572, 1784, 2126
HpyCH4III	ACNGT	5 cut(s)	84, 1503, 2114, 2232, 2561
HpyCH4IV	ACGT	1 cut(s)	1845
HpyF10VI	GCNNNNNNNGC	3 cut(s)	2002, 2160, 2310
HpySE526I	ACGT	1 cut(s)	1845
HspAI	GCGC	3 cut(s)	214, 1432, 2538
KpnI	GGTACC	2 cut(s)	413, 1267
Ksp22I	TGATCA	1 cut(s)	2344
LguI	GCTCTTC	1 cut(s)	1071
LmnI	GCTCC	4 cut(s)	591, 862, 1816, 2549
Lsp1109I	GCAGC	5 cut(s)	1426, 1543, 1674, 1749, 2478
LweI	GCATC	8 cut(s)	183, 498, 727, 749, 1060, 1232, 1327, 2062
MaeI	CTAG	8 cut(s)	138, 570, 1053, 1260, 1371, 1734, 2016, 2138
MaeII	ACGT	1 cut(s)	1845
MaeIII	GTNAC	7 cut(s)	166, 1136, 1841, 1884, 1983, 2329, 2542
MfeI	CAATTG	2 cut(s)	1761, 1977
MflI	RGATCY	1 cut(s)	1256
MhlI	GDGCHC	1 cut(s)	162
MlsI	TGGCCA	3 cut(s)	767, 1641, 2304
MluNI	TGGCCA	3 cut(s)	767, 1641, 2304
MlyI	GAGTC	4 cut(s)	135, 1892, 1991, 2464
MmeI	TCCRAC	4 cut(s)	436, 507, 538, 2545
Mox20I	TGGCCA	3 cut(s)	767, 1641, 2304
Mph1103I	ATGCAT	3 cut(s)	742, 1225, 2055
MscI	TGGCCA	3 cut(s)	767, 1641, 2304
MseI	TTAA	8 cut(s)	74, 651, 1182, 1215, 1293, 1455, 1904, 2007
MslI	CAYNNNNRTG	2 cut(s)	1199, 1398
Msp20I	TGGCCA	3 cut(s)	767, 1641, 2304
MspA1I	CMGCKG	1 cut(s)	2393
MspCI	CTTAAG	1 cut(s)	1181
MspI	CCGG	5 cut(s)	37, 389, 414, 1150, 2340
MspR9I	CCNGG	6 cut(s)	38, 339, 414, 415, 1151, 1268
MunI	CAATTG	2 cut(s)	1761, 1977
Mva1269I	GAATGC	2 cut(s)	232, 2540
MvaI	CCWGG	2 cut(s)	339, 1268
MvnI	CGCG	3 cut(s)	216, 1434, 1996
MwoI	GCNNNNNNNGC	3 cut(s)	2002, 2160, 2310
NciI	CCSGG	4 cut(s)	38, 414, 415, 1151
NdeI	CATATG	1 cut(s)	2575
NlaIV	GGNNCC	8 cut(s)	411, 787, 1121, 1265, 1818, 2317, 2338, 2477
NmuCI	GTSAC	4 cut(s)	1136, 1884, 1983, 2542
NruI	TCGCGA	1 cut(s)	1996
NsiI	ATGCAT	3 cut(s)	742, 1225, 2055
NspI	RCATGY	1 cut(s)	2057
NspV	TTCGAA	2 cut(s)	428, 2432
PaeI	GCATGC	1 cut(s)	2057
PagI	TCATGA	2 cut(s)	1798, 2347
PaqCI	CACCTGC	2 cut(s)	1765, 2138
PceI	AGGCCT	2 cut(s)	1924, 2587
PciSI	GCTCTTC	1 cut(s)	1071
PctI	GAATGC	2 cut(s)	232, 2540
PfeI	GAWTC	4 cut(s)	19, 334, 2278, 2617
PinAI	ACCGGT	1 cut(s)	388
PkrI	GCNGC	6 cut(s)	1441, 1533, 1689, 1739, 2493, 2634
PleI	GAGTC	4 cut(s)	135, 1891, 1990, 2463
PpsI	GAGTC	4 cut(s)	135, 1891, 1990, 2463
PpuMI	RGGWCCY	1 cut(s)	1120
PshAI	GACNNNNGTC	1 cut(s)	1419
PshBI	ATTAAT	2 cut(s)	74, 1455
Psp5II	RGGWCCY	1 cut(s)	1120
Psp6I	CCWGG	2 cut(s)	337, 1266
PspGI	CCWGG	2 cut(s)	337, 1266
PspN4I	GGNNCC	8 cut(s)	411, 787, 1121, 1265, 1818, 2317, 2338, 2477
PspPI	GGNCC	8 cut(s)	786, 817, 1120, 1270, 1871, 1943, 2041, 2511
PspPPI	RGGWCCY	1 cut(s)	1120
PstNI	CAGNNNCTG	2 cut(s)	1511, 1880
PsuI	RGATCY	1 cut(s)	1256
PvuII	CAGCTG	1 cut(s)	2393
RruI	TCGCGA	1 cut(s)	1996
RsaI	GTAC	6 cut(s)	411, 727, 1265, 1285, 2032, 2628
RsaNI	GTAC	6 cut(s)	410, 726, 1264, 1284, 2031, 2627
RseI	CAYNNNNRTG	2 cut(s)	1199, 1398
SapI	GCTCTTC	1 cut(s)	1071
SaqAI	TTAA	8 cut(s)	74, 651, 1182, 1215, 1293, 1455, 1904, 2007
SatI	GCNGC	6 cut(s)	1440, 1532, 1688, 1738, 2492, 2633
Sau96I	GGNCC	8 cut(s)	786, 817, 1120, 1270, 1871, 1943, 2041, 2511
SchI	GAGTC	4 cut(s)	135, 1892, 1991, 2464
ScrFI	CCNGG	6 cut(s)	38, 339, 414, 415, 1151, 1268
SduI	GDGCHC	1 cut(s)	162
SfaNI	GCATC	8 cut(s)	183, 498, 727, 749, 1060, 1232, 1327, 2062
SfcI	CTRYAG	2 cut(s)	1380, 2238
SfuI	TTCGAA	2 cut(s)	428, 2432
SinI	GGWCC	4 cut(s)	1120, 1270, 1943, 2511
SmaI	CCCGGG	1 cut(s)	415
SmiMI	CAYNNNNRTG	2 cut(s)	1199, 1398
SmlI	CTYRAG	3 cut(s)	685, 1181, 2496
SmoI	CTYRAG	3 cut(s)	685, 1181, 2496
SphI	GCATGC	1 cut(s)	2057
SseBI	AGGCCT	2 cut(s)	1924, 2587
SsiI	CCGC	9 cut(s)	220, 298, 820, 1117, 1147, 1273, 1480, 2313, 2633
SspI	AATATT	1 cut(s)	1213
SspMI	CTAG	8 cut(s)	138, 570, 1053, 1260, 1371, 1734, 2016, 2138
StuI	AGGCCT	2 cut(s)	1924, 2587
StyD4I	CCNGG	6 cut(s)	36, 337, 412, 413, 1149, 1266
StyI	CCWWGG	4 cut(s)	56, 2064, 2293, 2354
TaaI	ACNGT	5 cut(s)	84, 1503, 2114, 2232, 2561
TaiI	ACGT	1 cut(s)	1848
TaqI	TCGA	6 cut(s)	304, 314, 428, 1665, 1730, 2432
TatI	WGTACW	2 cut(s)	725, 2626
TauI	GCSGC	1 cut(s)	2635
TfiI	GAWTC	4 cut(s)	19, 334, 2278, 2617
Tru1I	TTAA	8 cut(s)	74, 651, 1182, 1215, 1293, 1455, 1904, 2007
Tru9I	TTAA	8 cut(s)	74, 651, 1182, 1215, 1293, 1455, 1904, 2007
TscAI	CASTG	3 cut(s)	601, 1563, 2235
TseFI	GTSAC	4 cut(s)	1136, 1884, 1983, 2542
TseI	GCWGC	5 cut(s)	1439, 1531, 1687, 1737, 2491
Tsp45I	GTSAC	4 cut(s)	1136, 1884, 1983, 2542
TspGWI	ACGGA	1 cut(s)	762
TspMI	CCCGGG	1 cut(s)	413
TspRI	CASTG	3 cut(s)	601, 1563, 2235
Vha464I	CTTAAG	1 cut(s)	1181
VpaK11BI	GGWCC	4 cut(s)	1120, 1270, 1943, 2511
VspI	ATTAAT	2 cut(s)	74, 1455
XapI	RAATTY	1 cut(s)	2286
XceI	RCATGY	1 cut(s)	2057
XmaI	CCCGGG	1 cut(s)	413
XmiI	GTMKAC	2 cut(s)	7, 1591
XspI	CTAG	8 cut(s)	138, 570, 1053, 1260, 1371, 1734, 2016, 2138
Zsp2I	ATGCAT	3 cut(s)	742, 1225, 2055

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.