pycom04g19310

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0007420
Physical Location & Seq
Reverse (-)
21065316 .. 21069311
3996 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1782 bp
ATGGAAGATGATAGTTCAACTGTTGTCAATGGTTCTGGAAATGCAATTACTAGTTTACGTACTATCAGCTCTAGCAACAGCATTTCTATGCACACAACTCAGCCACATGGATATGTCCCAATCTCTGCCAAAGGTCATAAGGAATCAGTTTATGCATTGGCAATGAATGATAGTGGATCGCTTCTGGTCTCTGGTGGAACAGAGAAGGTTGTTCGTGTTTGGGATCCAAGAACAGGTTCGAAGAAAATGAAACTAAGAGGGCATACAGATAATATCAGGGCTCTGCTGATTGATTCTACTGGAAGATTTTGCTTGTCAGGATCTTCTGATTCAATGATCAGGCTATGGGATCTTGGTCAACAGCGATGTGTGCATTCTTATGCTGTGCATACAGATTCTGTTTGGGCACTTGCCAGTACCCCAACATTTAGTCATGTATATAGTGGTGGGAGAGACCTTTCTTTATACTTGACAGACTTGGCCACCAGAGAGAGTCTCTTGCTTTCCACAGGGGAACATCCCATTTTGCAGTTGGCTTTACATGATGATAGTATATGGGTTGCAACAACAGATTCTTCAGTTCATAGATGGCCTGCTGAAGGGAGTAATCCCCAGAAGATTATTCAAAGAGGTGGTGCATTCTTGGCTGGAAATTTATCCTTTTCAAGAGCAAGGGTATCCTTAGAAGGATCAACCCTAGTCCCTGTTAATAAAGAACCTATATTTACGATTCCTGGAACTCCTGGAATAGTGCAACATGAAATATTAAACAATAGAAGGCATGTCTTGACAAAGGACACTGCTGATTCAGTGAAGTTGTGGGAGATTACGAGGGGTGTTGTCATTGAGGATTATGGAAAGGTCAAATTTGAGGAGAAAAAAGAAGAGCTTTTTGAGATGGTGAGCATTCCTGCATGGTTCACTGTGGATACCAGACTTGGATGTTTATCTATACATTTAGATACCCCACAATGCTTTTCGGCGGAGATGTATTCAGCAGACCTTAACATTGTGGGGAAGCCTGAAGATGACAAGGTTAATCTAGCGCGAGAAACCCTTAAAGGACTCTTGGCTCATTGGTTGGCAAAAAGAAAGCAAGGGTTTGGACCACAAGCATCAGCTAATGGGGATGTGTCATCTGGAAAGGATATTACTACTAGAAGTATTACCCATTCAAGAATTGAGGTGGATAGTAATGCTGAAAATGATTCAATGGTCCATCCTCCCTTCGAATTTTCTACAACTTCCCCTCCTTCTGTTATTACTGAGGGCTCTCAGGGAGGTCCATGGAGGAAGAAAATCACTGACCTAGATGGCACTGAAGATGACAAGGACTTTCCTTGGTGGTGTCTCGATTGTGTGTTGAATAATCGCCTACCCCCTAGAGAAAATACCAAGTGCAGTTTTTATCTACATCCATGTGAAGGTTCAACTGTTCAGATCCTCACTCAAGGGAAACTAAGCGCCCCTCGTATTTTACGAATTCATAAAGTTGTTAATTATGTTGTTGAGAAGATGGTCCTTGACAAACCATTGGATAGTGCCAATCCTGATGCCACATTTGCTCCTGGTCTTGCTGGAGGGCCATTGCAGCTATCATCGGTTGGAGATGGATCTTTCCGATCTGGATTGAAGCCATGGCAAAAGCTTAAGCCTTCTATAGAGATATTGTGCAACAATCAGGTCTTGTCCCCAGACATGAGCTTAGCCACGGTGCGGGCTTATATATGGAAGAAATCTGAGGACCTGGTTCTCAATTACAGGGTGATTCAGGGCAGGTGA

Protein Analysis

594

Amino Acids

65.25

Weight (kDa)

6.66

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WDR55 PF24796 18 - 123 1.7e-10 WDR55
WD40_CDC20-Fz PF24807 19 - 95 2.9e-08 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 25 - 155 1.5e-26 WDR3 first beta-propeller domain
EIF3I PF24805 40 - 131 9.2e-11 EIF3I
Beta-prop_WDR3_2nd PF25172 42 - 117 6.5e-10 WDR3 second beta-propeller domain
Beta-prop_WDR41 PF25178 43 - 160 7.6e-07 WDR41
Beta-prop_TEP1_2nd PF25047 43 - 179 1.3e-08 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 43 - 208 1.5e-20 WDR5 beta-propeller domain
WD40 PF00400 44 - 75 7.9e-06 WD domain, G-beta repeat
WD40_Gbeta PF25391 44 - 170 8.6e-11 G protein beta WD-40 repeat protein
Beta-prop_CAF1B_HIR1 PF24105 44 - 127 3.8e-08 CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3 PF25174 46 - 204 7.3e-22 THOC3 beta-propeller domain
WD40_Prp19 PF24814 47 - 200 1.9e-19 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 47 - 130 1.2e-12 WDHD1 first WD40 domain
WD40 PF00400 81 - 117 2.9e-07 WD domain, G-beta repeat
Beta-prop_WDR3_2nd PF25172 83 - 197 2.9e-06 WDR3 second beta-propeller domain
DUF3337 PF11816 444 - 588 1.1e-29 Domain of unknown function (DUF3337)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1767
Acc36I ACCTGC 1 cut(s) 1767
AccII CGCG 1 cut(s) 1048
AciI CCGC 2 cut(s) 983, 1717
AclWI GGATC 8 cut(s) 184, 218, 231, 328, 357, 697, 1435, 1621
AcoI YGGCCR 1 cut(s) 480
AcsI RAATTY 4 cut(s) 652, 866, 1232, 1482
AcuI CTGAAG 4 cut(s) 561, 618, 1044, 1341
AfaI GTAC 2 cut(s) 61, 418
AfiI CCNNNNNNNGG 4 cut(s) 233, 599, 1424, 1716
AflII CTTAAG 1 cut(s) 1649
AgsI TTSAA 9 cut(s) 18, 333, 626, 666, 1176, 1212, 1366, 1431, 1633
AhlI ACTAGT 1 cut(s) 50
AjnI CCWGG 4 cut(s) 733, 742, 1567, 1746
AjuI GAANNNNNNNTTGG 2 cut(s) 220, 252
AluBI AGCT 6 cut(s) 69, 889, 1121, 1594, 1648, 1704
AluI AGCT 6 cut(s) 69, 889, 1121, 1594, 1648, 1704
Alw26I GTCTC 4 cut(s) 193, 447, 500, 1355
AlwI GGATC 8 cut(s) 184, 218, 231, 328, 357, 697, 1435, 1621
AlwNI CAGNNNCTG 1 cut(s) 398
AoxI GGCC 3 cut(s) 480, 590, 1583
ApeKI GCWGC 1 cut(s) 1591
ApoI RAATTY 4 cut(s) 652, 866, 1232, 1482
Asp700I GAANNNNTTC 1 cut(s) 235
AspLEI GCGC 2 cut(s) 1048, 1466
AspS9I GGNCC 6 cut(s) 1106, 1216, 1283, 1519, 1583, 1744
AsuHPI GGTGA 2 cut(s) 913, 1777
AsuII TTCGAA 2 cut(s) 239, 1230
AvaII GGWCC 5 cut(s) 1106, 1216, 1283, 1519, 1744
BaeGI GKGCMC 1 cut(s) 409
BalI TGGCCA 1 cut(s) 482
BamHI GGATCC 1 cut(s) 223
BanII GRGCYC 2 cut(s) 283, 1274
BbvI GCAGC 1 cut(s) 1603
BccI CCATC 6 cut(s) 582, 892, 1227, 1307, 1510, 1604
BciT130I CCWGG 4 cut(s) 735, 744, 1569, 1748
BciVI GTATCC 2 cut(s) 688, 922
BclI TGATCA 1 cut(s) 336
BcoDI GTCTC 4 cut(s) 193, 447, 500, 1355
BcuI ACTAGT 1 cut(s) 50
BfaI CTAG 7 cut(s) 51, 72, 698, 1043, 1158, 1310, 1383
BfmI CTRYAG 1 cut(s) 1659
BfoI RGCGCY 1 cut(s) 1467
BfrI CTTAAG 1 cut(s) 1649
BfuAI ACCTGC 1 cut(s) 1767
BfuI GTATCC 2 cut(s) 688, 922
BisI GCNGC 1 cut(s) 1592
BlpI GCTNAGC 1 cut(s) 1705
BlsI GCNGC 1 cut(s) 1593
Bme1390I CCNGG 4 cut(s) 735, 744, 1569, 1748
Bme18I GGWCC 5 cut(s) 1106, 1216, 1283, 1519, 1744
BmgT120I GGNCC 6 cut(s) 1106, 1216, 1283, 1519, 1583, 1744
BmiI GGNNCC 1 cut(s) 225
BmrFI CCNGG 4 cut(s) 735, 744, 1569, 1748
BmsI GCATC 2 cut(s) 1124, 1543
BplI GAGNNNNNCTC 2 cut(s) 480, 512
BpmI CTGGAG 1 cut(s) 1599
Bpu1102I GCTNAGC 1 cut(s) 1705
Bpu14I TTCGAA 2 cut(s) 239, 1230
BpuEI CTTGAG 1 cut(s) 1434
BsaAI YACGTR 1 cut(s) 59
BsaBI GATNNNNATC 1 cut(s) 946
BsaI GGTCTC 2 cut(s) 193, 447
BsaJI CCNNGG 4 cut(s) 1286, 1340, 1637, 1710
BsaXI ACNNNNNCTCC 4 cut(s) 1234, 1264, 1549, 1579
Bsc4I CCNNNNNNNGG 4 cut(s) 233, 599, 1424, 1716
Bse1I ACTGG 2 cut(s) 304, 414
Bse3DI GCAATG 2 cut(s) 168, 1586
Bse8I GATNNNNATC 1 cut(s) 946
BseBI CCWGG 4 cut(s) 735, 744, 1569, 1748
BseDI CCNNGG 4 cut(s) 1286, 1340, 1637, 1710
BseGI GGATG 5 cut(s) 517, 947, 1135, 1219, 1414
BseJI GATNNNNATC 1 cut(s) 946
BseLI CCNNNNNNNGG 4 cut(s) 233, 599, 1424, 1716
BseMI GCAATG 2 cut(s) 168, 1586
BseMII CTCAG 4 cut(s) 113, 1257, 1289, 1731
BseNI ACTGG 2 cut(s) 304, 414
BseRI GAGGAG 1 cut(s) 887
BseSI GKGCMC 1 cut(s) 409
BseXI GCAGC 1 cut(s) 1603
BsgI GTGCAG 1 cut(s) 1420
Bsh1236I CGCG 1 cut(s) 1048
BshFI GGCC 3 cut(s) 482, 592, 1585
BslFI GGGAC 3 cut(s) 101, 686, 1675
BslI CCNNNNNNNGG 4 cut(s) 233, 599, 1424, 1716
BsmAI GTCTC 4 cut(s) 193, 447, 500, 1355
BsmFI GGGAC 3 cut(s) 101, 686, 1675
BsmI GAATGC 3 cut(s) 373, 638, 906
BsnI GGCC 3 cut(s) 482, 592, 1585
Bso31I GGTCTC 2 cut(s) 193, 447
Bsp119I TTCGAA 2 cut(s) 239, 1230
Bsp1286I GDGCHC 3 cut(s) 283, 409, 1274
Bsp143I GATC 9 cut(s) 176, 223, 320, 336, 349, 689, 1440, 1613, 1622
Bsp1720I GCTNAGC 1 cut(s) 1705
Bsp19I CCATGG 2 cut(s) 1286, 1637
BspACI CCGC 2 cut(s) 983, 1717
BspANI GGCC 3 cut(s) 482, 592, 1585
BspCNI CTCAG 4 cut(s) 112, 1258, 1288, 1732
BspFNI CGCG 1 cut(s) 1048
BspLI GGNNCC 1 cut(s) 225
BspMI ACCTGC 1 cut(s) 1767
BspPI GGATC 8 cut(s) 184, 218, 231, 328, 357, 697, 1435, 1621
BspQI GCTCTTC 1 cut(s) 879
BspT104I TTCGAA 2 cut(s) 239, 1230
BspTI CTTAAG 1 cut(s) 1649
BspTNI GGTCTC 2 cut(s) 193, 447
BsrDI GCAATG 2 cut(s) 168, 1586
BsrI ACTGG 2 cut(s) 304, 414
BssECI CCNNGG 4 cut(s) 1286, 1340, 1637, 1710
BssMI GATC 9 cut(s) 176, 223, 320, 336, 349, 689, 1440, 1613, 1622
BssT1I CCWWGG 3 cut(s) 1286, 1340, 1637
Bst2UI CCWGG 4 cut(s) 735, 744, 1569, 1748
Bst4CI ACNGT 4 cut(s) 22, 925, 1435, 1714
Bst6I CTCTTC 1 cut(s) 879
BstAFI CTTAAG 1 cut(s) 1649
BstBAI YACGTR 1 cut(s) 59
BstBI TTCGAA 2 cut(s) 239, 1230
BstC8I GCNNGC 2 cut(s) 594, 1719
BstDEI CTNAG 8 cut(s) 99, 254, 682, 1266, 1275, 1460, 1705, 1740
BstDSI CCRYGG 3 cut(s) 1286, 1637, 1710
BstENI CCTNNNNNAGG 1 cut(s) 597
BstF5I GGATG 5 cut(s) 517, 947, 1135, 1219, 1414
BstFNI CGCG 1 cut(s) 1048
BstH2I RGCGCY 1 cut(s) 1467
BstHHI GCGC 2 cut(s) 1048, 1466
BstKTI GATC 9 cut(s) 179, 226, 323, 339, 352, 692, 1443, 1616, 1625
BstMAI GTCTC 4 cut(s) 193, 447, 500, 1355
BstMBI GATC 9 cut(s) 176, 223, 320, 336, 349, 689, 1440, 1613, 1622
BstMWI GCNNNNNNNGC 4 cut(s) 370, 644, 1562, 1591
BstNI CCWGG 4 cut(s) 735, 744, 1569, 1748
BstNSI RCATGY 1 cut(s) 785
BstSCI CCNGG 4 cut(s) 733, 742, 1567, 1746
BstSFI CTRYAG 1 cut(s) 1659
BstSLI GKGCMC 1 cut(s) 409
BstSNI TACGTA 1 cut(s) 59
BstUI CGCG 1 cut(s) 1048
BstV1I GCAGC 1 cut(s) 1603
BstX2I RGATCY 5 cut(s) 223, 320, 349, 1440, 1613
BstYI RGATCY 5 cut(s) 223, 320, 349, 1440, 1613
BsuI GTATCC 2 cut(s) 688, 922
BsuRI GGCC 3 cut(s) 482, 592, 1585
BtgI CCRYGG 3 cut(s) 1286, 1637, 1710
BtgZI GCGATG 1 cut(s) 379
BtsCI GGATG 5 cut(s) 517, 947, 1135, 1219, 1414
BtsI GCAGTG 1 cut(s) 798
BtsIMutI CAGTG 5 cut(s) 798, 816, 921, 1302, 1317
BveI ACCTGC 1 cut(s) 1767
Cac8I GCNNGC 2 cut(s) 594, 1719
CaiI CAGNNNCTG 1 cut(s) 398
CfoI GCGC 2 cut(s) 1048, 1466
Cfr13I GGNCC 6 cut(s) 1106, 1216, 1283, 1519, 1583, 1744
CsiI ACCWGGT 1 cut(s) 1746
Csp6I GTAC 2 cut(s) 60, 417
CviQI GTAC 2 cut(s) 60, 417
DdeI CTNAG 8 cut(s) 99, 254, 682, 1266, 1275, 1460, 1705, 1740
DpnI GATC 9 cut(s) 178, 225, 322, 338, 351, 691, 1442, 1615, 1624
DpnII GATC 9 cut(s) 176, 223, 320, 336, 349, 689, 1440, 1613, 1622
EaeI YGGCCR 1 cut(s) 480
Eam1104I CTCTTC 1 cut(s) 879
EarI CTCTTC 1 cut(s) 879
EciI GGCGGA 1 cut(s) 998
Eco105I TACGTA 1 cut(s) 59
Eco130I CCWWGG 3 cut(s) 1286, 1340, 1637
Eco24I GRGCYC 2 cut(s) 283, 1274
Eco31I GGTCTC 2 cut(s) 193, 447
Eco47I GGWCC 5 cut(s) 1106, 1216, 1283, 1519, 1744
Eco57I CTGAAG 4 cut(s) 561, 618, 1044, 1341
EcoNI CCTNNNNNAGG 1 cut(s) 597
EcoO109I RGGNCCY 1 cut(s) 1744
EcoRI GAATTC 1 cut(s) 1482
EcoRII CCWGG 4 cut(s) 733, 742, 1567, 1746
EcoT14I CCWWGG 3 cut(s) 1286, 1340, 1637
EcoT22I ATGCAT 1 cut(s) 157
EcoT38I GRGCYC 2 cut(s) 283, 1274
ErhI CCWWGG 3 cut(s) 1286, 1340, 1637
FalI AAGNNNNNCTT 2 cut(s) 873, 905
FaqI GGGAC 3 cut(s) 101, 686, 1675
FauI CCCGC 1 cut(s) 1710
FbaI TGATCA 1 cut(s) 336
Fnu4HI GCNGC 1 cut(s) 1592
FokI GGATG 5 cut(s) 504, 954, 1142, 1206, 1401
FriOI GRGCYC 2 cut(s) 283, 1274
Fsp4HI GCNGC 1 cut(s) 1592
FspBI CTAG 7 cut(s) 51, 72, 698, 1043, 1158, 1310, 1383
GlaI GCGC 2 cut(s) 1047, 1465
GluI GCNGC 1 cut(s) 1592
GsuI CTGGAG 1 cut(s) 1599
HaeII RGCGCY 1 cut(s) 1467
HaeIII GGCC 3 cut(s) 482, 592, 1585
HhaI GCGC 2 cut(s) 1048, 1466
Hin6I GCGC 2 cut(s) 1046, 1464
HinP1I GCGC 2 cut(s) 1046, 1464
HincII GTYRAC 1 cut(s) 359
HindII GTYRAC 1 cut(s) 359
HindIII AAGCTT 1 cut(s) 1646
HphI GGTGA 2 cut(s) 913, 1777
Hpy166II GTNNAC 3 cut(s) 56, 359, 921
Hpy188I TCNGA 4 cut(s) 328, 1440, 1622, 1741
Hpy188III TCNNGA 9 cut(s) 36, 318, 666, 787, 1140, 1176, 1352, 1550, 1626
Hpy8I GTNNAC 3 cut(s) 56, 359, 921
HpyAV CCTTC 8 cut(s) 199, 593, 680, 771, 1237, 1263, 1418, 1665
HpyCH4III ACNGT 4 cut(s) 22, 925, 1435, 1714
HpyCH4IV ACGT 1 cut(s) 58
HpyF10VI GCNNNNNNNGC 4 cut(s) 370, 644, 1562, 1591
HpyF3I CTNAG 8 cut(s) 99, 254, 682, 1266, 1275, 1460, 1705, 1740
HpySE526I ACGT 1 cut(s) 58
HspAI GCGC 2 cut(s) 1046, 1464
Ksp22I TGATCA 1 cut(s) 336
Kzo9I GATC 9 cut(s) 176, 223, 320, 336, 349, 689, 1440, 1613, 1622
LguI GCTCTTC 1 cut(s) 879
LmnI GCTCC 1 cut(s) 1570
Lsp1109I GCAGC 1 cut(s) 1603
LweI GCATC 2 cut(s) 1124, 1543
MabI ACCWGGT 1 cut(s) 1746
MaeI CTAG 7 cut(s) 51, 72, 698, 1043, 1158, 1310, 1383
MaeII ACGT 1 cut(s) 58
MalI GATC 9 cut(s) 178, 225, 322, 338, 351, 691, 1442, 1615, 1624
MboI GATC 9 cut(s) 176, 223, 320, 336, 349, 689, 1440, 1613, 1622
MflI RGATCY 5 cut(s) 223, 320, 349, 1440, 1613
MhlI GDGCHC 3 cut(s) 283, 409, 1274
MlsI TGGCCA 1 cut(s) 482
MluCI AATT 8 cut(s) 45, 652, 866, 1179, 1232, 1482, 1498, 1756
MluNI TGGCCA 1 cut(s) 482
MlyI GAGTC 2 cut(s) 502, 1059
MmeI TCCRAC 1 cut(s) 1585
Mox20I TGGCCA 1 cut(s) 482
Mph1103I ATGCAT 1 cut(s) 157
MroXI GAANNNNTTC 1 cut(s) 235
MscI TGGCCA 1 cut(s) 482
MseI TTAA 7 cut(s) 708, 767, 1005, 1038, 1059, 1497, 1650
MslI CAYNNNNRTG 4 cut(s) 86, 111, 378, 1419
Msp20I TGGCCA 1 cut(s) 482
MspCI CTTAAG 1 cut(s) 1649
MspR9I CCNGG 4 cut(s) 735, 744, 1569, 1748
Mva1269I GAATGC 3 cut(s) 373, 638, 906
MvaI CCWGG 4 cut(s) 735, 744, 1569, 1748
MvnI CGCG 1 cut(s) 1048
MwoI GCNNNNNNNGC 4 cut(s) 370, 644, 1562, 1591
NcoI CCATGG 2 cut(s) 1286, 1637
NdeII GATC 9 cut(s) 176, 223, 320, 336, 349, 689, 1440, 1613, 1622
NlaIV GGNNCC 1 cut(s) 225
NsiI ATGCAT 1 cut(s) 157
NspI RCATGY 1 cut(s) 785
NspV TTCGAA 2 cut(s) 239, 1230
PaqCI CACCTGC 1 cut(s) 1767
PciSI GCTCTTC 1 cut(s) 879
PcsI WCGNNNNNNNCGW 1 cut(s) 1477
PctI GAATGC 3 cut(s) 373, 638, 906
PdmI GAANNNNTTC 1 cut(s) 235
PfeI GAWTC 9 cut(s) 143, 293, 329, 395, 572, 730, 806, 1208, 1768
PfoI TCCNGGA 2 cut(s) 733, 742
PkrI GCNGC 1 cut(s) 1593
PleI GAGTC 2 cut(s) 501, 1059
PpsI GAGTC 2 cut(s) 501, 1059
Ppu21I YACGTR 1 cut(s) 59
PpuMI RGGWCCY 1 cut(s) 1744
Psp5II RGGWCCY 1 cut(s) 1744
Psp6I CCWGG 4 cut(s) 733, 742, 1567, 1746
PspGI CCWGG 4 cut(s) 733, 742, 1567, 1746
PspN4I GGNNCC 1 cut(s) 225
PspPI GGNCC 6 cut(s) 1106, 1216, 1283, 1519, 1583, 1744
PspPPI RGGWCCY 1 cut(s) 1744
PstNI CAGNNNCTG 1 cut(s) 398
PsuI RGATCY 5 cut(s) 223, 320, 349, 1440, 1613
RsaI GTAC 2 cut(s) 61, 418
RsaNI GTAC 2 cut(s) 60, 417
RseI CAYNNNNRTG 4 cut(s) 86, 111, 378, 1419
SapI GCTCTTC 1 cut(s) 879
SaqAI TTAA 7 cut(s) 708, 767, 1005, 1038, 1059, 1497, 1650
SatI GCNGC 1 cut(s) 1592
Sau3AI GATC 9 cut(s) 176, 223, 320, 336, 349, 689, 1440, 1613, 1622
Sau96I GGNCC 6 cut(s) 1106, 1216, 1283, 1519, 1583, 1744
SchI GAGTC 2 cut(s) 502, 1059
ScrFI CCNGG 4 cut(s) 735, 744, 1569, 1748
SduI GDGCHC 3 cut(s) 283, 409, 1274
SexAI ACCWGGT 1 cut(s) 1746
SfaNI GCATC 2 cut(s) 1124, 1543
SfcI CTRYAG 1 cut(s) 1659
SfuI TTCGAA 2 cut(s) 239, 1230
SinI GGWCC 5 cut(s) 1106, 1216, 1283, 1519, 1744
SmiMI CAYNNNNRTG 4 cut(s) 86, 111, 378, 1419
SmlI CTYRAG 2 cut(s) 1449, 1649
SmoI CTYRAG 2 cut(s) 1449, 1649
SnaBI TACGTA 1 cut(s) 59
SpeI ACTAGT 1 cut(s) 50
Sse9I AATT 8 cut(s) 45, 652, 866, 1179, 1232, 1482, 1498, 1756
SsiI CCGC 2 cut(s) 983, 1717
SspI AATATT 1 cut(s) 765
SspMI CTAG 7 cut(s) 51, 72, 698, 1043, 1158, 1310, 1383
StyD4I CCNGG 4 cut(s) 733, 742, 1567, 1746
StyI CCWWGG 3 cut(s) 1286, 1340, 1637
TaaI ACNGT 4 cut(s) 22, 925, 1435, 1714
TaiI ACGT 1 cut(s) 61
TaqI TCGA 3 cut(s) 239, 1230, 1353
TasI AATT 8 cut(s) 45, 652, 866, 1179, 1232, 1482, 1498, 1756
TfiI GAWTC 9 cut(s) 143, 293, 329, 395, 572, 730, 806, 1208, 1768
Tru1I TTAA 7 cut(s) 708, 767, 1005, 1038, 1059, 1497, 1650
Tru9I TTAA 7 cut(s) 708, 767, 1005, 1038, 1059, 1497, 1650
TscAI CASTG 5 cut(s) 805, 816, 928, 1309, 1324
TseI GCWGC 1 cut(s) 1591
TspDTI ATGAA 5 cut(s) 179, 263, 572, 774, 1475
TspRI CASTG 5 cut(s) 805, 816, 928, 1309, 1324
Vha464I CTTAAG 1 cut(s) 1649
VpaK11BI GGWCC 5 cut(s) 1106, 1216, 1283, 1519, 1744
XagI CCTNNNNNAGG 1 cut(s) 597
XapI RAATTY 4 cut(s) 652, 866, 1232, 1482
XceI RCATGY 1 cut(s) 785
XcmI CCANNNNNNNNNTGG 1 cut(s) 529
XmnI GAANNNNTTC 1 cut(s) 235
XspI CTAG 7 cut(s) 51, 72, 698, 1043, 1158, 1310, 1383
Zsp2I ATGCAT 1 cut(s) 157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.