Family of unknown function (DUF5306)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g12531 |
| malus_domestica | MD00G1161700.v1.1 MD10G1043000.v1.1 |
| prunus_persica | Prupe.8G048500_v2.0.a1 |
| pyrus_communis | pycom05g03040 |
| rosa_laevigata | RLG00000013646 |
| rosa_roxburghii | Rroxscaffold_1G00008980 Rroxscaffold_3G00220660 Rroxscaffold_7G00195720 |
| rosa_rugosa | Rorug06G0072300 |
| rosa_samantha | Rh6AG187900 Rh6BG191300 Rh6CG190300 Rh6DG181900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 245 |
| AfaI | GTAC | 1 cut(s) | 8 |
| AfeI | AGCGCT | 1 cut(s) | 319 |
| AgsI | TTSAA | 2 cut(s) | 95, 118 |
| AjnI | CCWGG | 1 cut(s) | 331 |
| AluBI | AGCT | 4 cut(s) | 32, 208, 269, 290 |
| AluI | AGCT | 4 cut(s) | 32, 208, 269, 290 |
| Alw26I | GTCTC | 1 cut(s) | 128 |
| AlwI | GGATC | 1 cut(s) | 245 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 278 |
| Ama87I | CYCGRG | 2 cut(s) | 176, 321 |
| Aor51HI | AGCGCT | 1 cut(s) | 319 |
| ApeKI | GCWGC | 2 cut(s) | 290, 293 |
| AspLEI | GCGC | 1 cut(s) | 320 |
| AsuC2I | CCSGG | 1 cut(s) | 107 |
| AsuHPI | GGTGA | 2 cut(s) | 260, 325 |
| AvaI | CYCGRG | 2 cut(s) | 176, 321 |
| BbvI | GCAGC | 2 cut(s) | 277, 280 |
| BccI | CCATC | 4 cut(s) | 46, 209, 235, 265 |
| BceAI | ACGGC | 1 cut(s) | 86 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 275, 309 |
| BciT130I | CCWGG | 1 cut(s) | 333 |
| BcnI | CCSGG | 1 cut(s) | 107 |
| BcoDI | GTCTC | 1 cut(s) | 128 |
| BfmI | CTRYAG | 2 cut(s) | 270, 279 |
| BfoI | RGCGCY | 1 cut(s) | 321 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 107 |
| BisI | GCNGC | 2 cut(s) | 291, 294 |
| BlsI | GCNGC | 2 cut(s) | 292, 295 |
| BmcAI | AGTACT | 1 cut(s) | 8 |
| Bme1390I | CCNGG | 2 cut(s) | 107, 333 |
| BmeT110I | CYCGRG | 2 cut(s) | 176, 321 |
| BmrFI | CCNGG | 2 cut(s) | 107, 333 |
| BpuMI | CCSGG | 1 cut(s) | 107 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 32, 62 |
| BseBI | CCWGG | 1 cut(s) | 333 |
| BseMII | CTCAG | 2 cut(s) | 158, 213 |
| BseRI | GAGGAG | 2 cut(s) | 53, 180 |
| BseXI | GCAGC | 2 cut(s) | 277, 280 |
| BsgI | GTGCAG | 1 cut(s) | 240 |
| BsiHKCI | CYCGRG | 2 cut(s) | 176, 321 |
| BsiSI | CCGG | 1 cut(s) | 106 |
| BsmAI | GTCTC | 1 cut(s) | 128 |
| BsoBI | CYCGRG | 2 cut(s) | 176, 321 |
| Bsp143I | GATC | 1 cut(s) | 250 |
| BspCNI | CTCAG | 2 cut(s) | 157, 212 |
| BspMAI | CTGCAG | 1 cut(s) | 283 |
| BspPI | GGATC | 1 cut(s) | 245 |
| BssMI | GATC | 1 cut(s) | 250 |
| Bst2UI | CCWGG | 1 cut(s) | 333 |
| Bst4CI | ACNGT | 2 cut(s) | 15, 248 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstDEI | CTNAG | 3 cut(s) | 144, 199, 338 |
| BstH2I | RGCGCY | 1 cut(s) | 321 |
| BstHHI | GCGC | 1 cut(s) | 320 |
| BstKTI | GATC | 1 cut(s) | 253 |
| BstMAI | GTCTC | 1 cut(s) | 128 |
| BstMBI | GATC | 1 cut(s) | 250 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 107, 287 |
| BstNI | CCWGG | 1 cut(s) | 333 |
| BstSCI | CCNGG | 2 cut(s) | 105, 331 |
| BstSFI | CTRYAG | 2 cut(s) | 270, 279 |
| BstV1I | GCAGC | 2 cut(s) | 277, 280 |
| BtsIMutI | CAGTG | 2 cut(s) | 11, 159 |
| CaiI | CAGNNNCTG | 1 cut(s) | 278 |
| CfoI | GCGC | 1 cut(s) | 320 |
| Csp6I | GTAC | 1 cut(s) | 7 |
| CviAII | CATG | 1 cut(s) | 81 |
| CviJI | RGCY | 6 cut(s) | 32, 101, 110, 208, 269, 290 |
| CviKI_1 | RGCY | 6 cut(s) | 32, 101, 110, 208, 269, 290 |
| CviQI | GTAC | 1 cut(s) | 7 |
| DdeI | CTNAG | 3 cut(s) | 144, 199, 338 |
| DpnI | GATC | 1 cut(s) | 252 |
| DpnII | GATC | 1 cut(s) | 250 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| Eco47III | AGCGCT | 1 cut(s) | 319 |
| Eco88I | CYCGRG | 2 cut(s) | 176, 321 |
| EcoRII | CCWGG | 1 cut(s) | 331 |
| FaeI | CATG | 1 cut(s) | 84 |
| FaiI | YATR | 5 cut(s) | 21, 72, 74, 82, 244 |
| FatI | CATG | 1 cut(s) | 80 |
| Fnu4HI | GCNGC | 2 cut(s) | 291, 294 |
| Fsp4HI | GCNGC | 2 cut(s) | 291, 294 |
| GlaI | GCGC | 1 cut(s) | 319 |
| GluI | GCNGC | 2 cut(s) | 291, 294 |
| HaeII | RGCGCY | 1 cut(s) | 321 |
| HapII | CCGG | 1 cut(s) | 106 |
| HhaI | GCGC | 1 cut(s) | 320 |
| Hin1II | CATG | 1 cut(s) | 84 |
| Hin6I | GCGC | 1 cut(s) | 318 |
| HinP1I | GCGC | 1 cut(s) | 318 |
| HpaII | CCGG | 1 cut(s) | 106 |
| HphI | GGTGA | 2 cut(s) | 260, 325 |
| Hpy188I | TCNGA | 2 cut(s) | 202, 237 |
| Hpy188III | TCNNGA | 2 cut(s) | 146, 323 |
| HpyCH4III | ACNGT | 2 cut(s) | 15, 248 |
| HpyCH4V | TGCA | 3 cut(s) | 221, 281, 296 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 107, 287 |
| HpyF3I | CTNAG | 3 cut(s) | 144, 199, 338 |
| Hsp92II | CATG | 1 cut(s) | 84 |
| HspAI | GCGC | 1 cut(s) | 318 |
| Kzo9I | GATC | 1 cut(s) | 250 |
| LpnPI | CCDG | 5 cut(s) | 119, 131, 318, 330, 345 |
| Lsp1109I | GCAGC | 2 cut(s) | 277, 280 |
| MaeIII | GTNAC | 1 cut(s) | 65 |
| MalI | GATC | 1 cut(s) | 252 |
| MboI | GATC | 1 cut(s) | 250 |
| MboII | GAAGA | 3 cut(s) | 56, 107, 252 |
| MluCI | AATT | 3 cut(s) | 183, 297, 364 |
| MmeI | TCCRAC | 1 cut(s) | 218 |
| MnlI | CCTC | 6 cut(s) | 31, 34, 142, 201, 208, 264 |
| MspA1I | CMGCKG | 1 cut(s) | 32 |
| MspI | CCGG | 1 cut(s) | 106 |
| MspR9I | CCNGG | 2 cut(s) | 107, 333 |
| MvaI | CCWGG | 1 cut(s) | 333 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 107, 287 |
| NciI | CCSGG | 1 cut(s) | 107 |
| NdeII | GATC | 1 cut(s) | 250 |
| NlaIII | CATG | 1 cut(s) | 84 |
| PaeR7I | CTCGAG | 1 cut(s) | 321 |
| PkrI | GCNGC | 2 cut(s) | 292, 295 |
| Psp6I | CCWGG | 1 cut(s) | 331 |
| PspGI | CCWGG | 1 cut(s) | 331 |
| PstI | CTGCAG | 1 cut(s) | 283 |
| PstNI | CAGNNNCTG | 1 cut(s) | 278 |
| PvuII | CAGCTG | 1 cut(s) | 32 |
| RsaI | GTAC | 1 cut(s) | 8 |
| RsaNI | GTAC | 1 cut(s) | 7 |
| SatI | GCNGC | 2 cut(s) | 291, 294 |
| Sau3AI | GATC | 1 cut(s) | 250 |
| ScaI | AGTACT | 1 cut(s) | 8 |
| ScrFI | CCNGG | 2 cut(s) | 107, 333 |
| SetI | ASST | 8 cut(s) | 34, 200, 210, 271, 292, 315, 334, 355 |
| SfcI | CTRYAG | 2 cut(s) | 270, 279 |
| Sfr274I | CTCGAG | 1 cut(s) | 321 |
| SlaI | CTCGAG | 1 cut(s) | 321 |
| SmlI | CTYRAG | 1 cut(s) | 321 |
| SmoI | CTYRAG | 1 cut(s) | 321 |
| Sse9I | AATT | 3 cut(s) | 183, 297, 364 |
| StyD4I | CCNGG | 2 cut(s) | 105, 331 |
| TaaI | ACNGT | 2 cut(s) | 15, 248 |
| TaqI | TCGA | 1 cut(s) | 322 |
| TasI | AATT | 3 cut(s) | 183, 297, 364 |
| TatI | WGTACW | 1 cut(s) | 6 |
| TscAI | CASTG | 2 cut(s) | 18, 166 |
| TseI | GCWGC | 2 cut(s) | 290, 293 |
| TspDTI | ATGAA | 2 cut(s) | 180, 252 |
| TspRI | CASTG | 2 cut(s) | 18, 166 |
| XhoI | CTCGAG | 1 cut(s) | 321 |
| ZrmI | AGTACT | 1 cut(s) | 8 |