Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0008804

Physical Location & Seq

Genomic Coordinates Forward (+)

21187959 .. 21194356

Gene Structure 6398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGCTGCTGCTTCTGTCTTCCAGCCGATCTCCGACTCTCACCGATCTGCGGCTTCGGAGCTCTTCGCGCCCGCCGATGGATCGTACGGGAGTAGATTTAGAAGAGGCATATGAAGCCCTAAGATCGATGGAGGTTCTTCGGATCAATAAGAAGTCCGATATACGCGCGGCTACTTGTCAGTCCGTTGTGGACAAACTTGGGTCATCGTCTTCTGCCCCAAAGGATTTGTTCTTTGCCTTAAAGGTTAACAGCATTTTGGATTGCGAGGTTAAAAATGAAGTCTTGGAGGGCATTGCTTCAAGACTTAAAACTATTGTCAATAGTGCAAGTTCATTGCACGACTTCTACTACTCAGTCGGAAGCTTGGTACTTGTTAAGGATCAAAGTTCTGAAGTCGATGTACTTCTTGCTGATGCTGGTGGAGTTTTCCATTCTATCAAGTCTCTCAGCCAGAGTGATGGAAGGTGGCGCTTCAGTTCTGATAATCCTGAGGCTAGTACCTATGCTGCTGGTTTAGCGCTTGAAGCACTTTCTGGAGTTATCTCATTAGCATCTTCTGAAATTGATCAGTCTAAGATTGATACATTGAAAAGTGATGTTTTGAAGCTTTTTGACAGCATTGAGAAATATGATGATGGGACCATTTACTTTGATGAAAAAGTTGTCGATCTGCGTGAGCATCAGAGTCCTCTTTCAACTACTGCATCAGTTGTTCGAGGATTGACAGCATTTGCAACTGTGACATCTGGAAACATAAAGGTTCCAGGGGACAAGATATTGGGTCTGGCAAAATTCTTCCTTGGAGTTGGCATTCCTGGCAATGCTAAAGACTTCTTCAACCAAATAGATTCATTAGCTTCTTTGGAAAGCAATAAGGTTTCTATCCCACTGATATTATCACTTCCAGCTACAGTGCTTTCATTGACCAAGAAAGATCAGCTCCAGGTGAAAGTGAATACCGTGCTTGGTTCAAGTGCACCACCTCTGACAGTTAAGTTGGTGAAAGCATTCAGTTCTGGTTCAAAAGCTGCTTCCAAAATTGCAAGCCAGGAACTCAAGTTTGACAAAGAAAGTGGGTCCCATTTCTTGGACGTTTTGCCAGAAAGTGTCGACGTTGGAACTTACACATTTGTCTTTGAGGTGGTTCTGTATGATTCTGAAGATAGTGATTCTGAAGAAGAAAAAGTTTATGCAACTGGAGGTTCTACTCAAGTACAGATATTTATCACAGGAGTTATCAAAATTGAAAATGCAGAGATTGCAGTACTTGATAGTGATATTGGGAGCATAGAAACCCAGAAAAAACTAGATTTTGCTGGAGAAAATACTGTCTCGCTATCAGCAAACCACCTCCAAAAGCTGCGTTTATCCTTTCAATTGACCACTCCTTCTGGGCATGCTTTTAAGCCTCATCAGGTATTTCTTAAATTGACGCATGAGACCAAGGTTGAACATATCTTTGTGGTGGGCAGCTCTGGCCAAAAGTTTGAGAAAATACTGGATTTTCTTGGATTGGTTGAGAAGTTTTACTATCTGTCTGGTAGTTATGACATTCAATTAACTGTTGGCGATGCTGTAATGGAAAACTCTTTCTTACTGGCTATTGGCCAGATTGATTTGGATCTACCAGAAGCACCTGAGAAAGCCTCCCGCCCTCCTTCTCTGGCTGTTGATCCTTACTCAAAGTTTGGTCCCAAAGCTGAGATAGCCCATATCTTTAGGGTTCCAGAAAAGCGTCCTTCTCAGGAGCTATCTCTTGTTTTCTTGGGCCTTGTGCTTTTGCCATTGATTGGATTTTTGGTTGGGCTATTACGTTTGGGGGTGAATCTGAAGAACTTCCCTACTTCAGCAGTACCCGCCACCTTTGGTATCCTATTCCATGTTGGGATTGCTGCAGTTCTTTTGCTCTATGTGCTTTTCTGGTTGAAGTTGGATCTATTTACAACTCTCAAAACGCTTGGATTGTTGGGAGTTTTCTTGCTGTTTGTTGGACACCGGATTCTTTCCCACCTGGCCTCTACGTCATCTAAGTTGAAATCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005794 GO:0005886 GO:0005911 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008250 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009266 GO:0009409 GO:0009505 GO:0009506 GO:0009628 GO:0009987 GO:0012505 GO:0016020 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0030054 GO:0030312 GO:0031090 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0070085 GO:0071704 GO:0071944 GO:0098588 GO:0098796 GO:0098805 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 ko04144 map00510 map00513 map01100 map04141 map04144

Pfam Domains

Protein Families

Ribophorin_II

Protein Analysis

682

Amino Acids

73.85

Weight (kDa)

5.73

Isoelectric Point (pI)

39.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribophorin_II	PF05817	32 - 289	1.9e-54	Ribophorin II N-terminal domain
Ribophorin_II_2nd	PF23861	297 - 409	1.1e-21	Ribophorin II second domain
Ribophorin_II_3rd	PF23860	416 - 540	1.2e-39	Ribophorin II third domain
Ribophorin_II_C	PF25147	573 - 673	4.8e-25	Ribophorin_II, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21150 AT4G21150 AT4G21150
fragaria_vesca	FvH4_2g21250 FvH4_2g21250 FvH4_2g21250 FvH4_2g21250 FvH4_2g21250
malus_domestica	MD05G1194900.v1.1 MD10G1181500.v1.1
prunus_persica	Prupe.8G221600_v2.0.a1
pyrus_communis	pycom05g18220
rosa_chinensis	RchiOBHm_Chr6g0287811
rosa_laevigata	RLG00000012466
rosa_multiflora	Rmu_sc0003335.1_g000010 Rmu_sc0003877.1_g000006 Rmu_sc0006738.1_g000001
rosa_roxburghii	Rroxscaffold_7G00180780
rosa_rugosa	Rorug06G0191800 Rorug06G0191800
rosa_samantha	Rh6AG301700 Rh6BG307700
rosa_wichuraiana	Rw6G026060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1087, 1790
AccI	GTMKAC	1 cut(s)	1110
AccII	CGCG	3 cut(s)	67, 165, 167
AciI	CCGC	5 cut(s)	49, 71, 167, 1651, 1857
AclWI	GGATC	6 cut(s)	87, 149, 387, 1629, 1667, 1941
AcoI	YGGCCR	2 cut(s)	1477, 1606
AcsI	RAATTY	1 cut(s)	791
AcuI	CTGAAG	6 cut(s)	411, 457, 1179, 1194, 1830, 1850
AfaI	GTAC	7 cut(s)	85, 369, 402, 499, 1215, 1266, 1854
AfeI	AGCGCT	1 cut(s)	519
AfiI	CCNNNNNNNGG	4 cut(s)	48, 76, 1087, 1790
AjnI	CCWGG	5 cut(s)	763, 814, 942, 1047, 2010
Alw21I	GWGCWC	2 cut(s)	62, 979
Alw26I	GTCTC	3 cut(s)	447, 1336, 1433
Alw44I	GTGCAC	1 cut(s)	975
AlwI	GGATC	6 cut(s)	87, 149, 387, 1629, 1667, 1941
Aor51HI	AGCGCT	1 cut(s)	519
AoxI	GGCC	4 cut(s)	1477, 1606, 1768, 2013
ApaLI	GTGCAC	1 cut(s)	975
ApeKI	GCWGC	7 cut(s)	4, 7, 506, 1028, 1360, 1470, 1892
ApoI	RAATTY	1 cut(s)	791
Asp700I	GAANNNNTTC	2 cut(s)	1007, 1835
AspLEI	GCGC	4 cut(s)	69, 167, 471, 520
AspS9I	GGNCC	4 cut(s)	639, 1077, 1691, 1768
AsuHPI	GGTGA	4 cut(s)	31, 958, 1012, 1834
AvaII	GGWCC	3 cut(s)	639, 1077, 1691
AxyI	CCTNAGG	1 cut(s)	489
BaeGI	GKGCMC	1 cut(s)	979
BalI	TGGCCA	2 cut(s)	1479, 1608
BanII	GRGCYC	1 cut(s)	62
BarI	GAAGNNNNNNTAC	2 cut(s)	384, 416
BbsI	GAAGAC	2 cut(s)	9, 201
Bbv12I	GWGCWC	2 cut(s)	62, 979
BbvI	GCAGC	5 cut(s)	493, 1015, 1347, 1482, 1879
BccI	CCATC	4 cut(s)	70, 121, 452, 629
BciT130I	CCWGG	5 cut(s)	765, 816, 944, 1049, 2012
BciVI	GTATCC	1 cut(s)	1880
BclI	TGATCA	1 cut(s)	565
BcoDI	GTCTC	3 cut(s)	447, 1336, 1433
BfaI	CTAG	2 cut(s)	495, 1307
BfmI	CTRYAG	2 cut(s)	909, 1893
BfoI	RGCGCY	2 cut(s)	472, 521
BfuI	GTATCC	1 cut(s)	1880
BisI	GCNGC	9 cut(s)	5, 8, 50, 168, 507, 1029, 1361, 1471, 1893
BlsI	GCNGC	9 cut(s)	6, 9, 51, 169, 508, 1030, 1362, 1472, 1894
BmcAI	AGTACT	1 cut(s)	1266
Bme1390I	CCNGG	5 cut(s)	765, 816, 944, 1049, 2012
Bme18I	GGWCC	3 cut(s)	639, 1077, 1691
BmgT120I	GGNCC	4 cut(s)	639, 1077, 1691, 1768
BmiI	GGNNCC	6 cut(s)	640, 762, 1078, 1079, 1693, 1725
BmrFI	CCNGG	5 cut(s)	765, 816, 944, 1049, 2012
BmsI	GCATC	5 cut(s)	403, 560, 688, 713, 1561
BpiI	GAAGAC	2 cut(s)	9, 201
BplI	GAGNNNNNCTC	2 cut(s)	1631, 1663
BpmI	CTGGAG	4 cut(s)	555, 926, 1218, 1338
BpuEI	CTTGAG	2 cut(s)	1040, 1194
Bsa29I	ATCGAT	1 cut(s)	125
BsaBI	GATNNNNATC	2 cut(s)	1223, 1620
BsaI	GGTCTC	1 cut(s)	1433
BsaJI	CCNNGG	3 cut(s)	764, 799, 1443
BsaWI	WCCGGW	1 cut(s)	1995
Bsc4I	CCNNNNNNNGG	4 cut(s)	48, 76, 1087, 1790
Bse1I	ACTGG	3 cut(s)	1201, 1503, 1602
Bse21I	CCTNAGG	1 cut(s)	489
Bse3DI	GCAATG	3 cut(s)	291, 332, 826
Bse8I	GATNNNNATC	2 cut(s)	1223, 1620
BseBI	CCWGG	5 cut(s)	765, 816, 944, 1049, 2012
BseCI	ATCGAT	1 cut(s)	125
BseDI	CCNNGG	3 cut(s)	764, 799, 1443
BseJI	GATNNNNATC	2 cut(s)	1223, 1620
BseLI	CCNNNNNNNGG	4 cut(s)	48, 76, 1087, 1790
BseMI	GCAATG	3 cut(s)	291, 332, 826
BseMII	CTCAG	6 cut(s)	366, 460, 480, 1629, 1692, 1757
BseNI	ACTGG	3 cut(s)	1201, 1503, 1602
BseSI	GKGCMC	1 cut(s)	979
BseXI	GCAGC	5 cut(s)	493, 1015, 1347, 1482, 1879
Bsh1236I	CGCG	3 cut(s)	67, 165, 167
BshFI	GGCC	4 cut(s)	1479, 1608, 1770, 2015
BshVI	ATCGAT	1 cut(s)	125
BsiHKAI	GWGCWC	2 cut(s)	62, 979
BsiSI	CCGG	1 cut(s)	1996
BsiWI	CGTACG	1 cut(s)	83
BslFI	GGGAC	4 cut(s)	652, 782, 1063, 1677
BslI	CCNNNNNNNGG	4 cut(s)	48, 76, 1087, 1790
BsmAI	GTCTC	3 cut(s)	447, 1336, 1433
BsmFI	GGGAC	4 cut(s)	652, 782, 1063, 1677
BsmI	GAATGC	2 cut(s)	810, 1007
BsnI	GGCC	4 cut(s)	1479, 1608, 1770, 2015
Bso31I	GGTCTC	1 cut(s)	1433
Bsp1286I	GDGCHC	2 cut(s)	62, 979
BspACI	CCGC	5 cut(s)	49, 71, 167, 1651, 1857
BspANI	GGCC	4 cut(s)	1479, 1608, 1770, 2015
BspCNI	CTCAG	6 cut(s)	365, 459, 481, 1630, 1693, 1756
BspDI	ATCGAT	1 cut(s)	125
BspFNI	CGCG	3 cut(s)	67, 165, 167
BspLI	GGNNCC	6 cut(s)	640, 762, 1078, 1079, 1693, 1725
BspMAI	CTGCAG	1 cut(s)	1897
BspPI	GGATC	6 cut(s)	87, 149, 387, 1629, 1667, 1941
BspQI	GCTCTTC	1 cut(s)	67
BspTNI	GGTCTC	1 cut(s)	1433
BsrDI	GCAATG	3 cut(s)	291, 332, 826
BsrI	ACTGG	3 cut(s)	1201, 1503, 1602
BssECI	CCNNGG	3 cut(s)	764, 799, 1443
BssT1I	CCWWGG	2 cut(s)	799, 1443
Bst2UI	CCWGG	5 cut(s)	765, 816, 944, 1049, 2012
Bst4CI	ACNGT	6 cut(s)	739, 913, 961, 991, 1330, 1564
Bst6I	CTCTTC	2 cut(s)	67, 96
BstAPI	GCANNNNNTGC	1 cut(s)	1259
BstC8I	GCNNGC	3 cut(s)	71, 1045, 1398
BstDEI	CTNAG	9 cut(s)	119, 352, 446, 489, 573, 1638, 1701, 1743, 2028
BstFNI	CGCG	3 cut(s)	67, 165, 167
BstH2I	RGCGCY	2 cut(s)	472, 521
BstHHI	GCGC	4 cut(s)	69, 167, 471, 520
BstMAI	GTCTC	3 cut(s)	447, 1336, 1433
BstNI	CCWGG	5 cut(s)	765, 816, 944, 1049, 2012
BstNSI	RCATGY	1 cut(s)	1400
BstSCI	CCNGG	5 cut(s)	763, 814, 942, 1047, 2010
BstSFI	CTRYAG	2 cut(s)	909, 1893
BstSLI	GKGCMC	1 cut(s)	979
BstUI	CGCG	3 cut(s)	67, 165, 167
BstV1I	GCAGC	5 cut(s)	493, 1015, 1347, 1482, 1879
BstV2I	GAAGAC	2 cut(s)	9, 201
BstX2I	RGATCY	2 cut(s)	1621, 1933
BstXI	CCANNNNNNTGG	1 cut(s)	458
BstYI	RGATCY	2 cut(s)	1621, 1933
Bsu15I	ATCGAT	1 cut(s)	125
Bsu36I	CCTNAGG	1 cut(s)	489
BsuI	GTATCC	1 cut(s)	1880
BsuRI	GGCC	4 cut(s)	1479, 1608, 1770, 2015
BsuTUI	ATCGAT	1 cut(s)	125
BtgZI	GCGATG	1 cut(s)	1584
BtsIMutI	CAGTG	2 cut(s)	887, 918
Cac8I	GCNNGC	3 cut(s)	71, 1045, 1398
CfoI	GCGC	4 cut(s)	69, 167, 471, 520
Cfr13I	GGNCC	4 cut(s)	639, 1077, 1691, 1768
ClaI	ATCGAT	1 cut(s)	125
CseI	GACGC	2 cut(s)	1441, 1724
Csp6I	GTAC	7 cut(s)	84, 368, 401, 498, 1214, 1265, 1853
CspCI	CAANNNNNGTGG	2 cut(s)	1054, 1089
CviAII	CATG	3 cut(s)	1397, 1436, 1880
CviQI	GTAC	7 cut(s)	84, 368, 401, 498, 1214, 1265, 1853
DdeI	CTNAG	9 cut(s)	119, 352, 446, 489, 573, 1638, 1701, 1743, 2028
EaeI	YGGCCR	2 cut(s)	1477, 1606
Eam1104I	CTCTTC	2 cut(s)	67, 96
EarI	CTCTTC	2 cut(s)	67, 96
Ecl136II	GAGCTC	1 cut(s)	60
Eco130I	CCWWGG	2 cut(s)	799, 1443
Eco24I	GRGCYC	1 cut(s)	62
Eco31I	GGTCTC	1 cut(s)	1433
Eco47I	GGWCC	3 cut(s)	639, 1077, 1691
Eco47III	AGCGCT	1 cut(s)	519
Eco53kI	GAGCTC	1 cut(s)	60
Eco57I	CTGAAG	6 cut(s)	411, 457, 1179, 1194, 1830, 1850
Eco81I	CCTNAGG	1 cut(s)	489
EcoICRI	GAGCTC	1 cut(s)	60
EcoO109I	RGGNCCY	1 cut(s)	1077
EcoRII	CCWGG	5 cut(s)	763, 814, 942, 1047, 2010
EcoT14I	CCWWGG	2 cut(s)	799, 1443
EcoT38I	GRGCYC	1 cut(s)	62
ErhI	CCWWGG	2 cut(s)	799, 1443
FaeI	CATG	3 cut(s)	1400, 1439, 1883
FaqI	GGGAC	4 cut(s)	652, 782, 1063, 1677
FatI	CATG	3 cut(s)	1396, 1435, 1879
FauI	CCCGC	3 cut(s)	78, 1658, 1864
FauNDI	CATATG	1 cut(s)	109
FbaI	TGATCA	1 cut(s)	565
FblI	GTMKAC	1 cut(s)	1110
Fnu4HI	GCNGC	9 cut(s)	5, 8, 50, 168, 507, 1029, 1361, 1471, 1893
FriOI	GRGCYC	1 cut(s)	62
Fsp4HI	GCNGC	9 cut(s)	5, 8, 50, 168, 507, 1029, 1361, 1471, 1893
FspBI	CTAG	2 cut(s)	495, 1307
GlaI	GCGC	4 cut(s)	68, 166, 470, 519
GluI	GCNGC	9 cut(s)	5, 8, 50, 168, 507, 1029, 1361, 1471, 1893
GsuI	CTGGAG	4 cut(s)	555, 926, 1218, 1338
HaeII	RGCGCY	2 cut(s)	472, 521
HaeIII	GGCC	4 cut(s)	1479, 1608, 1770, 2015
HapII	CCGG	1 cut(s)	1996
HgaI	GACGC	2 cut(s)	1441, 1724
HhaI	GCGC	4 cut(s)	69, 167, 471, 520
Hin1II	CATG	3 cut(s)	1400, 1439, 1883
Hin6I	GCGC	4 cut(s)	67, 165, 469, 518
HinP1I	GCGC	4 cut(s)	67, 165, 469, 518
HincII	GTYRAC	2 cut(s)	247, 1111
HindII	GTYRAC	2 cut(s)	247, 1111
HindIII	AAGCTT	2 cut(s)	361, 605
HinfI	GANTC	7 cut(s)	34, 685, 848, 1154, 1169, 1825, 1999
HpaI	GTTAAC	1 cut(s)	247
HpaII	CCGG	1 cut(s)	1996
HphI	GGTGA	4 cut(s)	31, 958, 1012, 1834
Hpy166II	GTNNAC	4 cut(s)	190, 247, 977, 1111
Hpy188III	TCNNGA	6 cut(s)	300, 488, 534, 747, 1727, 1745
Hpy8I	GTNNAC	4 cut(s)	190, 247, 977, 1111
Hpy99I	CGWCG	1 cut(s)	1115
HpyAV	CCTTC	4 cut(s)	456, 1398, 1668, 1749
HpyCH4III	ACNGT	6 cut(s)	739, 913, 961, 991, 1330, 1564
HpyCH4IV	ACGT	4 cut(s)	1092, 1113, 1813, 2021
HpyF3I	CTNAG	9 cut(s)	119, 352, 446, 489, 573, 1638, 1701, 1743, 2028
HpySE526I	ACGT	4 cut(s)	1092, 1113, 1813, 2021
Hsp92II	CATG	3 cut(s)	1400, 1439, 1883
HspAI	GCGC	4 cut(s)	67, 165, 469, 518
KflI	GGGWCCC	1 cut(s)	1077
Ksp22I	TGATCA	1 cut(s)	565
KspAI	GTTAAC	1 cut(s)	247
LguI	GCTCTTC	1 cut(s)	67
LmnI	GCTCC	4 cut(s)	57, 945, 1284, 1747
Lsp1109I	GCAGC	5 cut(s)	493, 1015, 1347, 1482, 1879
LweI	GCATC	5 cut(s)	403, 560, 688, 713, 1561
MaeI	CTAG	2 cut(s)	495, 1307
MaeII	ACGT	4 cut(s)	1092, 1113, 1813, 2021
MaeIII	GTNAC	1 cut(s)	739
MfeI	CAATTG	1 cut(s)	1376
MflI	RGATCY	2 cut(s)	1621, 1933
MhlI	GDGCHC	2 cut(s)	62, 979
MlsI	TGGCCA	2 cut(s)	1479, 1608
MluCI	AATT	7 cut(s)	561, 791, 1038, 1242, 1376, 1427, 1556
MluNI	TGGCCA	2 cut(s)	1479, 1608
MlyI	GAGTC	2 cut(s)	28, 694
MmeI	TCCRAC	5 cut(s)	56, 337, 1096, 1911, 1969
Mox20I	TGGCCA	2 cut(s)	1479, 1608
MroXI	GAANNNNTTC	2 cut(s)	1007, 1835
MscI	TGGCCA	2 cut(s)	1479, 1608
MseI	TTAA	9 cut(s)	239, 246, 270, 306, 375, 993, 1404, 1425, 1559
Msp20I	TGGCCA	2 cut(s)	1479, 1608
MspI	CCGG	1 cut(s)	1996
MspR9I	CCNGG	5 cut(s)	765, 816, 944, 1049, 2012
MunI	CAATTG	1 cut(s)	1376
Mva1269I	GAATGC	2 cut(s)	810, 1007
MvaI	CCWGG	5 cut(s)	765, 816, 944, 1049, 2012
MvnI	CGCG	3 cut(s)	67, 165, 167
NdeI	CATATG	1 cut(s)	109
NlaIII	CATG	3 cut(s)	1400, 1439, 1883
NlaIV	GGNNCC	6 cut(s)	640, 762, 1078, 1079, 1693, 1725
NmuCI	GTSAC	1 cut(s)	739
NspI	RCATGY	1 cut(s)	1400
PaeI	GCATGC	1 cut(s)	1400
PciSI	GCTCTTC	1 cut(s)	67
PcsI	WCGNNNNNNNCGW	1 cut(s)	71
PctI	GAATGC	2 cut(s)	810, 1007
PdmI	GAANNNNTTC	2 cut(s)	1007, 1835
PfeI	GAWTC	5 cut(s)	848, 1154, 1169, 1825, 1999
Pfl23II	CGTACG	1 cut(s)	83
PflMI	CCANNNNNTGG	2 cut(s)	1087, 1790
PkrI	GCNGC	9 cut(s)	6, 9, 51, 169, 508, 1030, 1362, 1472, 1894
PleI	GAGTC	2 cut(s)	28, 693
PpsI	GAGTC	2 cut(s)	28, 693
PpuMI	RGGWCCY	1 cut(s)	1077
Psp124BI	GAGCTC	1 cut(s)	62
Psp5II	RGGWCCY	1 cut(s)	1077
Psp6I	CCWGG	5 cut(s)	763, 814, 942, 1047, 2010
PspGI	CCWGG	5 cut(s)	763, 814, 942, 1047, 2010
PspLI	CGTACG	1 cut(s)	83
PspN4I	GGNNCC	6 cut(s)	640, 762, 1078, 1079, 1693, 1725
PspPI	GGNCC	4 cut(s)	639, 1077, 1691, 1768
PspPPI	RGGWCCY	1 cut(s)	1077
PstI	CTGCAG	1 cut(s)	1897
PsuI	RGATCY	2 cut(s)	1621, 1933
RsaI	GTAC	7 cut(s)	85, 369, 402, 499, 1215, 1266, 1854
RsaNI	GTAC	7 cut(s)	84, 368, 401, 498, 1214, 1265, 1853
SacI	GAGCTC	1 cut(s)	62
SalI	GTCGAC	1 cut(s)	1109
SapI	GCTCTTC	1 cut(s)	67
SaqAI	TTAA	9 cut(s)	239, 246, 270, 306, 375, 993, 1404, 1425, 1559
SatI	GCNGC	9 cut(s)	5, 8, 50, 168, 507, 1029, 1361, 1471, 1893
Sau96I	GGNCC	4 cut(s)	639, 1077, 1691, 1768
ScaI	AGTACT	1 cut(s)	1266
SchI	GAGTC	2 cut(s)	28, 694
ScrFI	CCNGG	5 cut(s)	765, 816, 944, 1049, 2012
SduI	GDGCHC	2 cut(s)	62, 979
SfaNI	GCATC	5 cut(s)	403, 560, 688, 713, 1561
SfcI	CTRYAG	2 cut(s)	909, 1893
SinI	GGWCC	3 cut(s)	639, 1077, 1691
SmlI	CTYRAG	2 cut(s)	1055, 1209
SmoI	CTYRAG	2 cut(s)	1055, 1209
SphI	GCATGC	1 cut(s)	1400
Sse9I	AATT	7 cut(s)	561, 791, 1038, 1242, 1376, 1427, 1556
SsiI	CCGC	5 cut(s)	49, 71, 167, 1651, 1857
SspMI	CTAG	2 cut(s)	495, 1307
SstI	GAGCTC	1 cut(s)	62
StyD4I	CCNGG	5 cut(s)	763, 814, 942, 1047, 2010
StyI	CCWWGG	2 cut(s)	799, 1443
TaaI	ACNGT	6 cut(s)	739, 913, 961, 991, 1330, 1564
TaiI	ACGT	4 cut(s)	1095, 1116, 1816, 2024
TaqI	TCGA	5 cut(s)	125, 396, 666, 715, 1110
TasI	AATT	7 cut(s)	561, 791, 1038, 1242, 1376, 1427, 1556
TatI	WGTACW	3 cut(s)	400, 1213, 1264
TauI	GCSGC	2 cut(s)	52, 170
TfiI	GAWTC	5 cut(s)	848, 1154, 1169, 1825, 1999
Tru1I	TTAA	9 cut(s)	239, 246, 270, 306, 375, 993, 1404, 1425, 1559
Tru9I	TTAA	9 cut(s)	239, 246, 270, 306, 375, 993, 1404, 1425, 1559
TscAI	CASTG	2 cut(s)	894, 918
TseFI	GTSAC	1 cut(s)	739
TseI	GCWGC	7 cut(s)	4, 7, 506, 1028, 1360, 1470, 1892
Tsp45I	GTSAC	1 cut(s)	739
TspDTI	ATGAA	6 cut(s)	126, 291, 321, 669, 840, 909
TspGWI	ACGGA	1 cut(s)	172
TspRI	CASTG	2 cut(s)	894, 918
Van91I	CCANNNNNTGG	2 cut(s)	1087, 1790
VneI	GTGCAC	1 cut(s)	975
VpaK11BI	GGWCC	3 cut(s)	639, 1077, 1691
XapI	RAATTY	1 cut(s)	791
XceI	RCATGY	1 cut(s)	1400
XmiI	GTMKAC	1 cut(s)	1110
XmnI	GAANNNNTTC	2 cut(s)	1007, 1835
XspI	CTAG	2 cut(s)	495, 1307
ZrmI	AGTACT	1 cut(s)	1266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.