Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008804

Physical Location & Seq

Genomic Coordinates Reverse (-)

19073073 .. 19079686

Gene Structure 6614 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012466

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGCTACCAGAATCCTCGGGTCTCTTCTGGCGCTGGTTTTGGCGGTTACGATATGCGAAGCAGGCTCCGTCTTCCACCCGATCTCCGACTCTCACCGATCCGCCGCTTCAGAGCTCTTCACCCAGGGATCCTTTGATAGTTTAGAAGAGGTGTATGAAGCCCTGAGATCGTTTGAGGTTCTCGGGATTGATAAGCCTGATATACGTGGCGCTACTTGTAAGTCTGTTGTGGAAAAGCTTGGATCATCGGATTCTGCTACAAAGGACTTGTTCTATGCCTTAAAGGTTAACATCATTTTGAAGTGTGAGGTTAAGAAGGAAATATTTGAGGGCATTGCTTCAAGACTTAAAGATGTGGTAAATGGTGCAAGCTCATTGCTAGACATCTATTACTCTATTAGCAGTTTGGTACTTATTAAGGATCAAACTTCTGAGGTTGATGTACTTCTTGCTGATGCTGATGGCATTTTCCGATCTCTCAAGTCTCTGAGCCAGAGCGATGGAAGGTGGCGCTACAGTTCAGATAATCCCCAGTCTAGTACCTATGCTGCTGGATTAGCGATTGAAGCACTTGCTGGAGTTGTTTCATTAGCATCCTCTGAAATTGATCAGTCTATGATTGGGAAATTGAAAAGGGATATTTCGAAGCTCTTTGAGAGTGTCGAGAAATATGATGATGGCGCCTTTTATTTTGATGAAAAAGTTGATCAGAGTCCTCTTTCAACTACTGCATCAGTTGTTCGAGGGCTGACAGCGTTAGCAGCTGTGACGTCAGAAAAGTTAAAGGTTCCAGGGGAGAAGATATTGGGTTTGGCAAAATTCTTCCTTGGGATTGGCATTCCGGGCAATAATCAAGATTTCTTCAACCAAATTGACTCTTTAGCTTCTTTGGAAAGCAATAAGGTCTCCGTCCCTCTGATTTTATCGCTTCCAACTGCAGTGCTTTCATTGACTAAAAAAGACCAGCTCAAGGTTAAAGTGAGTACTGTGCTTGGATCAAGTGCTCCTCCTCTGACCGTTAAATTGGTGCGAGCTTTCAGTTCTGGTTCAAAAGATGATTCCATTATTGACAGCCAGGAACTCAAGTTCAATAAAAAAAGTGGATACCATGTCCTGGATGTTTTGCCACAAAGTGTTGGTGTTGGCAGTTACATATTTGTCTTTGAGGTTGTTCTTCATGATTCTGAAGACGAAACCGTTTATACAACTGGAGGTTTTGCCCAAGTAGGTTTATTTGTTACCGGAGTTATCAATATAGAGAATGCAGAAATTTCTGTACTTGAAAGCGATAAGAGCATAGAAACCCAGAAAAAATTAGATTTAGCTGGAGAAAATGCAGTTTCACTATCAGCAAACCACCTCCAAAAGCTGCGCCTATCGTTTCAATTGACTACTCCTTTGGGTCATGTTTTTAAGCCACATCAGGTGTTTCTCAAATTGACACATGAGACCAAGGTTGAACATATATTTGTGGTGGGGAACTCTGGCAAAAAATTTGAGAAAATACTAGATTTTCTCGGGTTGGTTGACAAGTTTTACTATCTCTCTGGTAGTTACGACCTTCAATTAACTGTTGGAGATGCTGTAATGGAGAACTCTTTCTTACGGGCCATTGGCCACATTGATTTAGACCTACCAGAAGCACCTGAGAAGGCCACCCGCCCTCCTTCACCGGCTGTTAACCCTTTATTAAAATATGGGCCCAAAGCAGAGATAAGCCATATTTTCAGGGTTCCAGAGAAGCTTCCTCCTAACCATCTCTCTCTTGCTTTCTTGGGTCTTCTGCTTTTGCCATTGATTGGATTTTTGGTTGGGCTATTGCGGTTAGGAGTGAATCTGAAGAACTTCCCTACGTCAGCAGTTCCAGCCACCTTTGGTATTCTATTCCATGTTGGCATTGCAGCAGTTCTTTTGCTCTATGTGCTTTTCTGGCTGAAGTTGGATCTATTTACGACCCTGAAATGGCTTGGATTGTTGGGAGTTTTCTTGCTGTTTGTGGGACACAGGATCCTTTCCCATCTCGCCTCTACATCATCCAAGTTGAAATCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005794 GO:0005886 GO:0005911 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008250 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009266 GO:0009409 GO:0009505 GO:0009506 GO:0009628 GO:0009987 GO:0012505 GO:0016020 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0030054 GO:0030312 GO:0031090 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0070085 GO:0071704 GO:0071944 GO:0098588 GO:0098796 GO:0098805 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 ko04144 map00510 map00513 map01100 map04141 map04144

Pfam Domains

Protein Families

Ribophorin_II

Protein Analysis

685

Amino Acids

74.26

Weight (kDa)

6.14

Isoelectric Point (pI)

36.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribophorin_II	PF05817	28 - 298	5.9e-58	Ribophorin II N-terminal domain
Ribophorin_II_2nd	PF23861	306 - 409	2.6e-20	Ribophorin II second domain
Ribophorin_II_3rd	PF23860	420 - 543	9.5e-39	Ribophorin II third domain
Ribophorin_II_C	PF25147	576 - 676	5e-24	Ribophorin_II, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21150 AT4G21150 AT4G21150
fragaria_vesca	FvH4_2g21250 FvH4_2g21250 FvH4_2g21250 FvH4_2g21250 FvH4_2g21250
malus_domestica	MD05G1194900.v1.1 MD10G1181500.v1.1
prunus_persica	Prupe.8G221600_v2.0.a1
pyrus_communis	pycom05g18220
rosa_chinensis	RchiOBHm_Chr6g0287811
rosa_laevigata	RLG00000012466
rosa_multiflora	Rmu_sc0003335.1_g000010 Rmu_sc0003877.1_g000006 Rmu_sc0006738.1_g000001
rosa_roxburghii	Rroxscaffold_7G00180780
rosa_rugosa	Rorug06G0191800 Rorug06G0191800
rosa_samantha	Rh6AG301700 Rh6BG307700
rosa_wichuraiana	Rw6G026060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	773
AccB1I	GGYRCC	1 cut(s)	680
AccB7I	CCANNNNNTGG	2 cut(s)	1114, 1799
AciI	CCGC	5 cut(s)	44, 102, 105, 1660, 1822
AclWI	GGATC	9 cut(s)	93, 123, 136, 250, 429, 1003, 1950, 2002, 2015
AcoI	YGGCCR	1 cut(s)	1615
AcsI	RAATTY	3 cut(s)	818, 1269, 1493
AcuI	CTGAAG	4 cut(s)	93, 1206, 1859, 1955
AcyI	GRCGYC	2 cut(s)	681, 770
AdeI	CACNNNGTG	1 cut(s)	1133
AfaI	GTAC	5 cut(s)	411, 444, 541, 985, 1278
AfiI	CCNNNNNNNGG	4 cut(s)	970, 1114, 1799, 1962
AjnI	CCWGG	4 cut(s)	123, 790, 1074, 1113
AloI	GAACNNNNNNTCC	2 cut(s)	1070, 1102
Alw21I	GWGCWC	2 cut(s)	117, 1006
Alw26I	GTCTC	4 cut(s)	27, 489, 910, 1442
AlwI	GGATC	9 cut(s)	93, 123, 136, 250, 429, 1003, 1950, 2002, 2015
Ama87I	CYCGRG	3 cut(s)	17, 182, 1517
AoxI	GGCC	4 cut(s)	1608, 1615, 1653, 1700
ApaI	GGGCCC	1 cut(s)	1704
ApeKI	GCWGC	4 cut(s)	548, 761, 1369, 1901
ApoI	RAATTY	3 cut(s)	818, 1269, 1493
ArsI	GACNNNNNNTTYG	2 cut(s)	1381, 1413
Asp700I	GAANNNNTTC	2 cut(s)	1598, 1844
AspLEI	GCGC	5 cut(s)	34, 212, 513, 683, 1374
AspS9I	GGNCC	3 cut(s)	1608, 1700, 1701
AsuC2I	CCSGG	1 cut(s)	843
AsuHPI	GGTGA	3 cut(s)	86, 112, 1662
AsuII	TTCGAA	1 cut(s)	644
AvaI	CYCGRG	3 cut(s)	17, 182, 1517
BaeGI	GKGCMC	1 cut(s)	1704
BalI	TGGCCA	1 cut(s)	1617
BamHI	GGATCC	2 cut(s)	128, 2007
BanI	GGYRCC	1 cut(s)	680
BanII	GRGCYC	2 cut(s)	117, 1704
BbsI	GAAGAC	3 cut(s)	64, 1194, 1772
Bbv12I	GWGCWC	2 cut(s)	117, 1006
BbvI	GCAGC	4 cut(s)	535, 773, 1356, 1913
BccI	CCATC	5 cut(s)	455, 494, 671, 1764, 2025
BciT130I	CCWGG	4 cut(s)	125, 792, 1076, 1115
BciVI	GTATCC	1 cut(s)	1097
BclI	TGATCA	2 cut(s)	607, 706
BcnI	CCSGG	1 cut(s)	843
BcoDI	GTCTC	4 cut(s)	27, 489, 910, 1442
BfaI	CTAG	3 cut(s)	380, 537, 1508
BfmI	CTRYAG	2 cut(s)	514, 936
BfoI	RGCGCY	4 cut(s)	35, 213, 514, 684
BfuI	GTATCC	1 cut(s)	1097
BisI	GCNGC	5 cut(s)	105, 549, 762, 1370, 1902
BlsI	GCNGC	5 cut(s)	106, 550, 763, 1371, 1903
BmcAI	AGTACT	1 cut(s)	985
Bme1390I	CCNGG	5 cut(s)	125, 792, 843, 1076, 1115
BmeT110I	CYCGRG	3 cut(s)	17, 182, 1517
BmgT120I	GGNCC	3 cut(s)	1608, 1700, 1701
BmiI	GGNNCC	7 cut(s)	67, 130, 682, 789, 1702, 1734, 2009
BmrFI	CCNGG	5 cut(s)	125, 792, 843, 1076, 1115
BmrI	ACTGGG	1 cut(s)	526
BmsI	GCATC	4 cut(s)	445, 602, 740, 1570
BmuI	ACTGGG	1 cut(s)	526
BpiI	GAAGAC	3 cut(s)	64, 1194, 1772
BpmI	CTGGAG	3 cut(s)	597, 1230, 1347
Bpu14I	TTCGAA	1 cut(s)	644
BpuEI	CTTGAG	3 cut(s)	464, 953, 1067
BpuMI	CCSGG	1 cut(s)	843
BsaAI	YACGTR	1 cut(s)	206
BsaHI	GRCGYC	2 cut(s)	681, 770
BsaI	GGTCTC	3 cut(s)	27, 910, 1442
BsaJI	CCNNGG	6 cut(s)	16, 123, 124, 791, 826, 1452
BsaWI	WCCGGW	1 cut(s)	1241
BsaXI	ACNNNNNCTCC	6 cut(s)	68, 98, 1569, 1599, 1648, 1678
Bsc4I	CCNNNNNNNGG	4 cut(s)	970, 1114, 1799, 1962
Bse118I	RCCGGY	1 cut(s)	1672
Bse1I	ACTGG	2 cut(s)	532, 1213
Bse3DI	GCAATG	3 cut(s)	333, 374, 1896
BseBI	CCWGG	4 cut(s)	125, 792, 1076, 1115
BseDI	CCNNGG	6 cut(s)	16, 123, 124, 791, 826, 1452
BseGI	GGATG	3 cut(s)	593, 1123, 2033
BseLI	CCNNNNNNNGG	4 cut(s)	970, 1114, 1799, 1962
BseMI	GCAATG	3 cut(s)	333, 374, 1896
BseMII	CTCAG	4 cut(s)	155, 423, 479, 1638
BseNI	ACTGG	2 cut(s)	532, 1213
BseRI	GAGGAG	2 cut(s)	996, 999
BseSI	GKGCMC	1 cut(s)	1704
BseXI	GCAGC	4 cut(s)	535, 773, 1356, 1913
BshFI	GGCC	4 cut(s)	1610, 1617, 1655, 1702
BshNI	GGYRCC	1 cut(s)	680
BsiHKAI	GWGCWC	2 cut(s)	117, 1006
BsiHKCI	CYCGRG	3 cut(s)	17, 182, 1517
BsiSI	CCGG	3 cut(s)	842, 1242, 1673
BslFI	GGGAC	2 cut(s)	896, 2013
BslI	CCNNNNNNNGG	4 cut(s)	970, 1114, 1799, 1962
BsmAI	GTCTC	4 cut(s)	27, 489, 910, 1442
BsmFI	GGGAC	2 cut(s)	896, 2013
BsmI	GAATGC	2 cut(s)	837, 1267
BsnI	GGCC	4 cut(s)	1610, 1617, 1655, 1702
Bso31I	GGTCTC	3 cut(s)	27, 910, 1442
BsoBI	CYCGRG	3 cut(s)	17, 182, 1517
Bsp119I	TTCGAA	1 cut(s)	644
Bsp120I	GGGCCC	1 cut(s)	1700
Bsp1286I	GDGCHC	3 cut(s)	117, 1006, 1704
BspACI	CCGC	5 cut(s)	44, 102, 105, 1660, 1822
BspANI	GGCC	4 cut(s)	1610, 1617, 1655, 1702
BspCNI	CTCAG	4 cut(s)	156, 424, 480, 1639
BspHI	TCATGA	1 cut(s)	1177
BspLI	GGNNCC	7 cut(s)	67, 130, 682, 789, 1702, 1734, 2009
BspMAI	CTGCAG	1 cut(s)	940
BspPI	GGATC	9 cut(s)	93, 123, 136, 250, 429, 1003, 1950, 2002, 2015
BspQI	GCTCTTC	1 cut(s)	122
BspT104I	TTCGAA	1 cut(s)	644
BspT107I	GGYRCC	1 cut(s)	680
BspTNI	GGTCTC	3 cut(s)	27, 910, 1442
BsrDI	GCAATG	3 cut(s)	333, 374, 1896
BsrFI	RCCGGY	1 cut(s)	1672
BsrI	ACTGG	2 cut(s)	532, 1213
BssAI	RCCGGY	1 cut(s)	1672
BssECI	CCNNGG	6 cut(s)	16, 123, 124, 791, 826, 1452
BssNI	GRCGYC	2 cut(s)	681, 770
BssT1I	CCWWGG	2 cut(s)	826, 1452
Bst2UI	CCWGG	4 cut(s)	125, 792, 1076, 1115
Bst4CI	ACNGT	5 cut(s)	518, 988, 1018, 1198, 1573
Bst6I	CTCTTC	3 cut(s)	30, 122, 141
BstACI	GRCGYC	2 cut(s)	681, 770
BstBAI	YACGTR	1 cut(s)	206
BstBI	TTCGAA	1 cut(s)	644
BstC8I	GCNNGC	3 cut(s)	64, 370, 1032
BstDEI	CTNAG	4 cut(s)	164, 432, 488, 1647
BstF5I	GGATG	3 cut(s)	593, 1123, 2033
BstH2I	RGCGCY	4 cut(s)	35, 213, 514, 684
BstHHI	GCGC	5 cut(s)	34, 212, 513, 683, 1374
BstMAI	GTCTC	4 cut(s)	27, 489, 910, 1442
BstMWI	GCNNNNNNNGC	9 cut(s)	63, 557, 566, 761, 843, 1293, 1865, 1921, 1930
BstNI	CCWGG	4 cut(s)	125, 792, 1076, 1115
BstSCI	CCNGG	5 cut(s)	123, 790, 841, 1074, 1113
BstSFI	CTRYAG	2 cut(s)	514, 936
BstSLI	GKGCMC	1 cut(s)	1704
BstV1I	GCAGC	4 cut(s)	535, 773, 1356, 1913
BstV2I	GAAGAC	3 cut(s)	64, 1194, 1772
BstX2I	RGATCY	3 cut(s)	128, 1942, 2007
BstXI	CCANNNNNNTGG	1 cut(s)	500
BstYI	RGATCY	3 cut(s)	128, 1942, 2007
BsuI	GTATCC	1 cut(s)	1097
BsuRI	GGCC	4 cut(s)	1610, 1617, 1655, 1702
BtgZI	GCGATG	1 cut(s)	513
BtsCI	GGATG	3 cut(s)	593, 1123, 2033
BtsI	GCAGTG	1 cut(s)	945
BtsIMutI	CAGTG	1 cut(s)	945
Cac8I	GCNNGC	3 cut(s)	64, 370, 1032
CciI	TCATGA	1 cut(s)	1177
CfoI	GCGC	5 cut(s)	34, 212, 513, 683, 1374
Cfr10I	RCCGGY	1 cut(s)	1672
Cfr13I	GGNCC	3 cut(s)	1608, 1700, 1701
Csp6I	GTAC	5 cut(s)	410, 443, 540, 984, 1277
CviAII	CATG	5 cut(s)	1109, 1178, 1406, 1445, 1889
CviQI	GTAC	5 cut(s)	410, 443, 540, 984, 1277
DdeI	CTNAG	4 cut(s)	164, 432, 488, 1647
DinI	GGCGCC	1 cut(s)	682
DraIII	CACNNNGTG	1 cut(s)	1133
EaeI	YGGCCR	1 cut(s)	1615
Eam1104I	CTCTTC	3 cut(s)	30, 122, 141
EarI	CTCTTC	3 cut(s)	30, 122, 141
EciI	GGCGGA	1 cut(s)	91
Ecl136II	GAGCTC	1 cut(s)	115
Eco130I	CCWWGG	2 cut(s)	826, 1452
Eco24I	GRGCYC	2 cut(s)	117, 1704
Eco31I	GGTCTC	3 cut(s)	27, 910, 1442
Eco53kI	GAGCTC	1 cut(s)	115
Eco57I	CTGAAG	4 cut(s)	93, 1206, 1859, 1955
Eco88I	CYCGRG	3 cut(s)	17, 182, 1517
EcoICRI	GAGCTC	1 cut(s)	115
EcoRII	CCWGG	4 cut(s)	123, 790, 1074, 1113
EcoT14I	CCWWGG	2 cut(s)	826, 1452
EcoT38I	GRGCYC	2 cut(s)	117, 1704
EgeI	GGCGCC	1 cut(s)	682
EheI	GGCGCC	1 cut(s)	682
ErhI	CCWWGG	2 cut(s)	826, 1452
FaeI	CATG	5 cut(s)	1112, 1181, 1409, 1448, 1892
FaqI	GGGAC	2 cut(s)	896, 2013
FatI	CATG	5 cut(s)	1108, 1177, 1405, 1444, 1888
FauI	CCCGC	1 cut(s)	1667
FbaI	TGATCA	2 cut(s)	607, 706
Fnu4HI	GCNGC	5 cut(s)	105, 549, 762, 1370, 1902
FokI	GGATG	3 cut(s)	580, 1130, 2020
FriOI	GRGCYC	2 cut(s)	117, 1704
Fsp4HI	GCNGC	5 cut(s)	105, 549, 762, 1370, 1902
FspBI	CTAG	3 cut(s)	380, 537, 1508
GlaI	GCGC	5 cut(s)	33, 211, 512, 682, 1373
GluI	GCNGC	5 cut(s)	105, 549, 762, 1370, 1902
GsuI	CTGGAG	3 cut(s)	597, 1230, 1347
HaeII	RGCGCY	4 cut(s)	35, 213, 514, 684
HaeIII	GGCC	4 cut(s)	1610, 1617, 1655, 1702
HapII	CCGG	3 cut(s)	842, 1242, 1673
HhaI	GCGC	5 cut(s)	34, 212, 513, 683, 1374
Hin1I	GRCGYC	2 cut(s)	681, 770
Hin1II	CATG	5 cut(s)	1112, 1181, 1409, 1448, 1892
Hin6I	GCGC	5 cut(s)	32, 210, 511, 681, 1372
HinP1I	GCGC	5 cut(s)	32, 210, 511, 681, 1372
HincII	GTYRAC	3 cut(s)	289, 1528, 1681
HindII	GTYRAC	3 cut(s)	289, 1528, 1681
HindIII	AAGCTT	2 cut(s)	236, 1742
HinfI	GANTC	8 cut(s)	12, 89, 251, 712, 875, 1058, 1181, 1834
HpaI	GTTAAC	2 cut(s)	289, 1681
HpaII	CCGG	3 cut(s)	842, 1242, 1673
HphI	GGTGA	3 cut(s)	86, 112, 1662
Hpy166II	GTNNAC	3 cut(s)	289, 1528, 1681
Hpy188III	TCNNGA	6 cut(s)	184, 342, 664, 854, 1178, 1736
Hpy8I	GTNNAC	3 cut(s)	289, 1528, 1681
HpyAV	CCTTC	5 cut(s)	310, 498, 1571, 1645, 1677
HpyCH4III	ACNGT	5 cut(s)	518, 988, 1018, 1198, 1573
HpyCH4IV	ACGT	3 cut(s)	205, 770, 1853
HpyCH4V	TGCA	6 cut(s)	368, 731, 938, 1265, 1337, 1901
HpyF10VI	GCNNNNNNNGC	9 cut(s)	63, 557, 566, 761, 843, 1293, 1865, 1921, 1930
HpyF3I	CTNAG	4 cut(s)	164, 432, 488, 1647
HpySE526I	ACGT	3 cut(s)	205, 770, 1853
Hsp92I	GRCGYC	2 cut(s)	681, 770
Hsp92II	CATG	5 cut(s)	1112, 1181, 1409, 1448, 1892
HspAI	GCGC	5 cut(s)	32, 210, 511, 681, 1372
KasI	GGCGCC	1 cut(s)	680
Ksp22I	TGATCA	2 cut(s)	607, 706
KspAI	GTTAAC	2 cut(s)	289, 1681
LguI	GCTCTTC	1 cut(s)	122
LmnI	GCTCC	2 cut(s)	71, 1009
Lsp1109I	GCAGC	4 cut(s)	535, 773, 1356, 1913
LweI	GCATC	4 cut(s)	445, 602, 740, 1570
MaeI	CTAG	3 cut(s)	380, 537, 1508
MaeII	ACGT	3 cut(s)	205, 770, 1853
MaeIII	GTNAC	5 cut(s)	46, 766, 1148, 1237, 1553
MfeI	CAATTG	1 cut(s)	1385
MflI	RGATCY	3 cut(s)	128, 1942, 2007
MhlI	GDGCHC	3 cut(s)	117, 1006, 1704
MlsI	TGGCCA	1 cut(s)	1617
MluNI	TGGCCA	1 cut(s)	1617
Mly113I	GGCGCC	1 cut(s)	681
MlyI	GAGTC	3 cut(s)	83, 721, 869
MmeI	TCCRAC	4 cut(s)	111, 956, 1555, 1920
Mox20I	TGGCCA	1 cut(s)	1617
MroXI	GAANNNNTTC	2 cut(s)	1598, 1844
MscI	TGGCCA	1 cut(s)	1617
Msp20I	TGGCCA	1 cut(s)	1617
MspA1I	CMGCKG	1 cut(s)	764
MspI	CCGG	3 cut(s)	842, 1242, 1673
MspR9I	CCNGG	5 cut(s)	125, 792, 843, 1076, 1115
MunI	CAATTG	1 cut(s)	1385
Mva1269I	GAATGC	2 cut(s)	837, 1267
MvaI	CCWGG	4 cut(s)	125, 792, 1076, 1115
MwoI	GCNNNNNNNGC	9 cut(s)	63, 557, 566, 761, 843, 1293, 1865, 1921, 1930
NarI	GGCGCC	1 cut(s)	681
NciI	CCSGG	1 cut(s)	843
NlaIII	CATG	5 cut(s)	1112, 1181, 1409, 1448, 1892
NlaIV	GGNNCC	7 cut(s)	67, 130, 682, 789, 1702, 1734, 2009
NmuCI	GTSAC	1 cut(s)	766
NspV	TTCGAA	1 cut(s)	644
PagI	TCATGA	1 cut(s)	1177
PasI	CCCWGGG	1 cut(s)	124
PciSI	GCTCTTC	1 cut(s)	122
PctI	GAATGC	2 cut(s)	837, 1267
PdmI	GAANNNNTTC	2 cut(s)	1598, 1844
PfeI	GAWTC	5 cut(s)	12, 251, 1058, 1181, 1834
PflMI	CCANNNNNTGG	2 cut(s)	1114, 1799
PfoI	TCCNGGA	1 cut(s)	1113
PkrI	GCNGC	5 cut(s)	106, 550, 763, 1371, 1903
PleI	GAGTC	3 cut(s)	83, 720, 869
PluTI	GGCGCC	1 cut(s)	684
PpsI	GAGTC	3 cut(s)	83, 720, 869
Ppu21I	YACGTR	1 cut(s)	206
Psp124BI	GAGCTC	1 cut(s)	117
Psp6I	CCWGG	4 cut(s)	123, 790, 1074, 1113
PspGI	CCWGG	4 cut(s)	123, 790, 1074, 1113
PspN4I	GGNNCC	7 cut(s)	67, 130, 682, 789, 1702, 1734, 2009
PspOMI	GGGCCC	1 cut(s)	1700
PspPI	GGNCC	3 cut(s)	1608, 1700, 1701
PstI	CTGCAG	1 cut(s)	940
PsuI	RGATCY	3 cut(s)	128, 1942, 2007
PvuII	CAGCTG	1 cut(s)	764
RsaI	GTAC	5 cut(s)	411, 444, 541, 985, 1278
RsaNI	GTAC	5 cut(s)	410, 443, 540, 984, 1277
SacI	GAGCTC	1 cut(s)	117
SapI	GCTCTTC	1 cut(s)	122
SatI	GCNGC	5 cut(s)	105, 549, 762, 1370, 1902
Sau96I	GGNCC	3 cut(s)	1608, 1700, 1701
ScaI	AGTACT	1 cut(s)	985
SchI	GAGTC	3 cut(s)	83, 721, 869
ScrFI	CCNGG	5 cut(s)	125, 792, 843, 1076, 1115
SduI	GDGCHC	3 cut(s)	117, 1006, 1704
SfaNI	GCATC	4 cut(s)	445, 602, 740, 1570
SfcI	CTRYAG	2 cut(s)	514, 936
SfoI	GGCGCC	1 cut(s)	682
SfuI	TTCGAA	1 cut(s)	644
SmlI	CTYRAG	3 cut(s)	479, 968, 1082
SmoI	CTYRAG	3 cut(s)	479, 968, 1082
SsiI	CCGC	5 cut(s)	44, 102, 105, 1660, 1822
SspDI	GGCGCC	1 cut(s)	680
SspI	AATATT	1 cut(s)	324
SspMI	CTAG	3 cut(s)	380, 537, 1508
SstI	GAGCTC	1 cut(s)	117
StyD4I	CCNGG	5 cut(s)	123, 790, 841, 1074, 1113
StyI	CCWWGG	2 cut(s)	826, 1452
TaaI	ACNGT	5 cut(s)	518, 988, 1018, 1198, 1573
TaiI	ACGT	3 cut(s)	208, 773, 1856
TaqI	TCGA	3 cut(s)	644, 663, 742
TatI	WGTACW	3 cut(s)	442, 983, 1276
TauI	GCSGC	1 cut(s)	107
TfiI	GAWTC	5 cut(s)	12, 251, 1058, 1181, 1834
TscAI	CASTG	1 cut(s)	945
TseFI	GTSAC	1 cut(s)	766
TseI	GCWGC	4 cut(s)	548, 761, 1369, 1901
Tsp45I	GTSAC	1 cut(s)	766
TspDTI	ATGAA	5 cut(s)	171, 576, 711, 936, 1166
TspGWI	ACGGA	2 cut(s)	58, 898
TspRI	CASTG	1 cut(s)	945
Van91I	CCANNNNNTGG	2 cut(s)	1114, 1799
XapI	RAATTY	3 cut(s)	818, 1269, 1493
XmnI	GAANNNNTTC	2 cut(s)	1598, 1844
XspI	CTAG	3 cut(s)	380, 537, 1508
ZraI	GACGTC	1 cut(s)	771
ZrmI	AGTACT	1 cut(s)	985

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.