Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008804

Physical Location & Seq

Genomic Coordinates Forward (+)

51098586 .. 51106050

Gene Structure 7465 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25821

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGCTACCCGAACCCTCGGGGCACTTGTGGTGCTCCTTTTGGCGATTACCATATGCGAAGCGGCCTCCGTCTTCCACCCGATCTCCGACTCTCACCGATCCGCCGCTTCTGAGCTCTTCACCCAGGGATCCTTCGACAGTTTAGAAAAGGCGTATGAAGCCCTGAGATCGTTTGAGGTTCTCGGGATTGATAAGCCTGATATACGTGGCGCTACTTGTAAGTCTGTTGTGGAAAAGCTTGGATCATCGGAATCTGCTCCAAAAGACTTGTTCTATGCCTTAAAGGTTAACAGCATTTTGAAGTGTGGGGTTAAGAAGGAAGTACTTGAGGGCATTGCTTCAAGACTTAAAGCTGTGGTAAATGGTGCAAGCTCATTGCTAGACATCTATTACTCTATTGGCAGTTTGGTGCTTATTAAGGATCAAACTTCTGAGGTTGATGTACTTCTTGCTGATGCTGATGGCGTTTTCCGATCTATCAAGTCTCTGAGCCAGAGTGATGGAAGGTGGCGCTACAGTTCAGATAATCCCCAGTCTAGTACCTATGCTGCGGGATTAGCGATTGAAGCACTTGCTGGAGTTGTTTCATTAGCATCCTCTGAAATTGATCAGTCTATGATTGGGAAATTAAAAAGGGATGTTTCGAAGCTTTTTGACAGTGTCGAGAAATATGATGATGGCGCCTTTTATTTTGATGAAAAAGTTGATCAGAGTCCTCTTTCAACTACCGCGTCAGTTGTTCGAGGGCTGACAGCGTTAGCAGCTGTGACATCTGAAAAGTTAAAGGTTCCAGGGGAGAAGATTTTGGGTTTGGCAAAATTCTTCCTTGGGATTGGCATTCCAGGCAATAATAAAGATTTCTTTAACCAGATTGACTCTTTAGCTTCTTTGGAAAGCAATAAGGTCTCCGTCCCTCTGATTTTATCACTTCCAACTACAGTGCTTTCATTGACTAAAAAAGACCAGCTCAAGGTTAAAGTCGGTACTGTGCTTGGATCAAGTGCTCCTCCTCTGACCGTTAAATTGTTGCGAGCTTTCAGTTCTGGTTCAAAAGATGCTTCCATTATTGCCAGCCAGGAACTCAAGTTCGATAAAGAAAGTGGATACCATGTCCTGGATGTTTTGCCAAAAAGTGTTGATGTTGGAAGTTACATATTTGTCTTTGAGGTTGTTCTTCATGATTCTGAAGATGAAACCGTTTATACAACTGGAGGTTTGGCCCAAGTAGATGTATTTGTTACCGGAGTTATCAATATAGAGAATGCAGAAATTTCTGTACTTGAAAGCGATAAGAGTGTAGAAACCCAGAAAAAATTAGATTTAGCTGGAGAAAATGCAGTTTCACTATCAGCAAACCACCTCCAAAAGCTGCGCCTATCCTTCCAATTGACTACTCCTTTGGGTCATGCTTTTAAGCCACATCAGGTGTTTCTCAAATTGACACATGAGACCAAGGTTGAACATATATTTGTGGTGGGGAACTCCGGCAAAAAATTTGAGAAAATACTAGATTTCCTCGGGTTGGTTGACAAGTTCTACTATCTCTCGGGTAGTTACGACCTTCAATTAACTGTTGGAGATGCTGTAATGGAGAACTCTTTCTTACGGGCTATTGGCCACATTGATTTAGATCTACCAGAAGCACCTGAGAAGGCCACCCGCCCTCCTTCACCGGCTGTTAACCCTTTATTAAAGTATGGGCCCAAAGCAGAGATAAGCCATATTTTCAGGGTTCCAGAGAAGCTTCCTCCTAACCATCTCTCTCTTGCTTTCTTGGGTCTTCTGCTTTTGCCATTGATTGGATTTTTGGTTGGGCTATTGCGCTTAGGAGTGAATCTGAAGAACTTCCCCACGTCAGCAGTTCCAGCAACCTTTGGTATTCTATTCCATGTTGGCATTGCAGCAGTTCTTTTGCTCTATGTGCTTTTCTGGCTGAAGTTGGATCTATTTACAACCCTGAAATGGCTTGGATTGTTGGGAGTTTTCTTGCTGTTTGTGGGGCACAGGATCCTTTCCCATCTCGCCTCTACATCATCCAAGTTGAAATCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005794 GO:0005886 GO:0005911 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008250 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009266 GO:0009409 GO:0009505 GO:0009506 GO:0009628 GO:0009987 GO:0012505 GO:0016020 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0030054 GO:0030312 GO:0031090 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0070085 GO:0071704 GO:0071944 GO:0098588 GO:0098796 GO:0098805 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 ko04144 map00510 map00513 map01100 map04141 map04144

Pfam Domains

Protein Families

Ribophorin_II

Protein Analysis

684

Amino Acids

73.96

Weight (kDa)

6.46

Isoelectric Point (pI)

33.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribophorin_II	PF05817	28 - 298	1.7e-59	Ribophorin II N-terminal domain
Ribophorin_II_2nd	PF23861	306 - 413	3.4e-21	Ribophorin II second domain
Ribophorin_II_3rd	PF23860	420 - 543	5e-39	Ribophorin II third domain
Ribophorin_II_C	PF25147	576 - 676	5e-24	Ribophorin_II, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21150 AT4G21150 AT4G21150
fragaria_vesca	FvH4_2g21250 FvH4_2g21250 FvH4_2g21250 FvH4_2g21250 FvH4_2g21250
malus_domestica	MD05G1194900.v1.1 MD10G1181500.v1.1
prunus_persica	Prupe.8G221600_v2.0.a1
pyrus_communis	pycom05g18220
rosa_chinensis	RchiOBHm_Chr6g0287811
rosa_laevigata	RLG00000012466
rosa_multiflora	Rmu_sc0003335.1_g000010 Rmu_sc0003877.1_g000006 Rmu_sc0006738.1_g000001
rosa_roxburghii	Rroxscaffold_7G00180780
rosa_rugosa	Rorug06G0191800 Rorug06G0191800
rosa_samantha	Rh6AG301700 Rh6BG307700
rosa_wichuraiana	Rw6G026060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	680
AccB7I	CCANNNNNTGG	2 cut(s)	1114, 1799
AccII	CGCG	1 cut(s)	731
AciI	CCGC	6 cut(s)	62, 102, 105, 551, 729, 1660
AclWI	GGATC	9 cut(s)	93, 123, 136, 250, 429, 1003, 1950, 2002, 2015
AcoI	YGGCCR	1 cut(s)	1615
AcsI	RAATTY	3 cut(s)	818, 1269, 1493
AcuI	CTGAAG	3 cut(s)	1206, 1859, 1955
AcyI	GRCGYC	1 cut(s)	681
AfaI	GTAC	5 cut(s)	324, 444, 541, 985, 1278
AfiI	CCNNNNNNNGG	5 cut(s)	970, 1114, 1522, 1799, 1962
AgsI	TTSAA	9 cut(s)	301, 342, 566, 723, 1050, 1283, 1460, 1565, 2044
AjiI	CACGTC	1 cut(s)	1854
AjnI	CCWGG	5 cut(s)	123, 790, 841, 1074, 1113
AloI	GAACNNNNNNTCC	2 cut(s)	1070, 1102
Alw21I	GWGCWC	3 cut(s)	36, 117, 1006
Alw26I	GTCTC	3 cut(s)	489, 910, 1442
AlwI	GGATC	9 cut(s)	93, 123, 136, 250, 429, 1003, 1950, 2002, 2015
Ama87I	CYCGRG	4 cut(s)	17, 182, 1517, 1546
AoxI	GGCC	5 cut(s)	63, 1218, 1615, 1653, 1700
ApaI	GGGCCC	1 cut(s)	1704
ApeKI	GCWGC	4 cut(s)	548, 761, 1369, 1901
ApoI	RAATTY	3 cut(s)	818, 1269, 1493
ArsI	GACNNNNNNTTYG	2 cut(s)	1381, 1413
Asp700I	GAANNNNTTC	2 cut(s)	1598, 1844
AspLEI	GCGC	5 cut(s)	212, 513, 683, 1374, 1824
AspS9I	GGNCC	3 cut(s)	1219, 1700, 1701
AsuHPI	GGTGA	3 cut(s)	86, 112, 1662
AsuII	TTCGAA	1 cut(s)	644
AvaI	CYCGRG	4 cut(s)	17, 182, 1517, 1546
BaeGI	GKGCMC	3 cut(s)	25, 1704, 2004
BalI	TGGCCA	1 cut(s)	1617
BamHI	GGATCC	2 cut(s)	128, 2007
BanI	GGYRCC	1 cut(s)	680
BanII	GRGCYC	2 cut(s)	117, 1704
BbsI	GAAGAC	2 cut(s)	64, 1772
Bbv12I	GWGCWC	3 cut(s)	36, 117, 1006
BbvI	GCAGC	4 cut(s)	535, 773, 1356, 1913
BccI	CCATC	5 cut(s)	455, 494, 671, 1764, 2025
BciT130I	CCWGG	5 cut(s)	125, 792, 843, 1076, 1115
BciVI	GTATCC	1 cut(s)	1097
BclI	TGATCA	2 cut(s)	607, 706
BcoDI	GTCTC	3 cut(s)	489, 910, 1442
BfaI	CTAG	3 cut(s)	380, 537, 1508
BfmI	CTRYAG	2 cut(s)	514, 936
BfoI	RGCGCY	3 cut(s)	213, 514, 684
BfuI	GTATCC	1 cut(s)	1097
BglII	AGATCT	1 cut(s)	1630
BisI	GCNGC	6 cut(s)	63, 105, 549, 762, 1370, 1902
BlsI	GCNGC	6 cut(s)	64, 106, 550, 763, 1371, 1903
BmcAI	AGTACT	1 cut(s)	324
Bme1390I	CCNGG	5 cut(s)	125, 792, 843, 1076, 1115
BmeT110I	CYCGRG	4 cut(s)	17, 182, 1517, 1546
BmgBI	CACGTC	1 cut(s)	1854
BmgT120I	GGNCC	3 cut(s)	1219, 1700, 1701
BmiI	GGNNCC	6 cut(s)	130, 682, 789, 1702, 1734, 2009
BmrFI	CCNGG	5 cut(s)	125, 792, 843, 1076, 1115
BmrI	ACTGGG	1 cut(s)	526
BmsI	GCATC	4 cut(s)	445, 602, 1045, 1570
BmuI	ACTGGG	1 cut(s)	526
BpiI	GAAGAC	2 cut(s)	64, 1772
BpmI	CTGGAG	3 cut(s)	597, 1230, 1347
Bpu10I	CCTNAGC	1 cut(s)	1825
Bpu14I	TTCGAA	1 cut(s)	644
BpuEI	CTTGAG	3 cut(s)	347, 953, 1067
BsaAI	YACGTR	1 cut(s)	206
BsaBI	GATNNNNATC	1 cut(s)	1629
BsaHI	GRCGYC	1 cut(s)	681
BsaI	GGTCTC	2 cut(s)	910, 1442
BsaJI	CCNNGG	7 cut(s)	16, 123, 124, 791, 826, 1452, 1516
BsaWI	WCCGGW	1 cut(s)	1241
BsaXI	ACNNNNNCTCC	6 cut(s)	68, 98, 1569, 1599, 1648, 1678
Bsc4I	CCNNNNNNNGG	5 cut(s)	970, 1114, 1522, 1799, 1962
Bse118I	RCCGGY	1 cut(s)	1672
Bse1I	ACTGG	2 cut(s)	532, 1213
Bse3DI	GCAATG	3 cut(s)	333, 374, 1896
Bse8I	GATNNNNATC	1 cut(s)	1629
BseBI	CCWGG	5 cut(s)	125, 792, 843, 1076, 1115
BseDI	CCNNGG	7 cut(s)	16, 123, 124, 791, 826, 1452, 1516
BseGI	GGATG	4 cut(s)	593, 643, 1123, 2033
BseJI	GATNNNNATC	1 cut(s)	1629
BseLI	CCNNNNNNNGG	5 cut(s)	970, 1114, 1522, 1799, 1962
BseMI	GCAATG	3 cut(s)	333, 374, 1896
BseMII	CTCAG	5 cut(s)	102, 155, 423, 479, 1638
BseNI	ACTGG	2 cut(s)	532, 1213
BseRI	GAGGAG	2 cut(s)	996, 999
BseSI	GKGCMC	3 cut(s)	25, 1704, 2004
BseXI	GCAGC	4 cut(s)	535, 773, 1356, 1913
Bsh1236I	CGCG	1 cut(s)	731
BshFI	GGCC	5 cut(s)	65, 1220, 1617, 1655, 1702
BshNI	GGYRCC	1 cut(s)	680
BsiHKAI	GWGCWC	3 cut(s)	36, 117, 1006
BsiHKCI	CYCGRG	4 cut(s)	17, 182, 1517, 1546
BsiSI	CCGG	3 cut(s)	1242, 1485, 1673
BslFI	GGGAC	1 cut(s)	896
BslI	CCNNNNNNNGG	5 cut(s)	970, 1114, 1522, 1799, 1962
BsmAI	GTCTC	3 cut(s)	489, 910, 1442
BsmFI	GGGAC	1 cut(s)	896
BsmI	GAATGC	2 cut(s)	837, 1267
BsnI	GGCC	5 cut(s)	65, 1220, 1617, 1655, 1702
Bso31I	GGTCTC	2 cut(s)	910, 1442
BsoBI	CYCGRG	4 cut(s)	17, 182, 1517, 1546
Bsp119I	TTCGAA	1 cut(s)	644
Bsp120I	GGGCCC	1 cut(s)	1700
Bsp1286I	GDGCHC	6 cut(s)	25, 36, 117, 1006, 1704, 2004
BspACI	CCGC	6 cut(s)	62, 102, 105, 551, 729, 1660
BspANI	GGCC	5 cut(s)	65, 1220, 1617, 1655, 1702
BspCNI	CTCAG	5 cut(s)	103, 156, 424, 480, 1639
BspFNI	CGCG	1 cut(s)	731
BspHI	TCATGA	1 cut(s)	1177
BspLI	GGNNCC	6 cut(s)	130, 682, 789, 1702, 1734, 2009
BspPI	GGATC	9 cut(s)	93, 123, 136, 250, 429, 1003, 1950, 2002, 2015
BspQI	GCTCTTC	1 cut(s)	122
BspT104I	TTCGAA	1 cut(s)	644
BspT107I	GGYRCC	1 cut(s)	680
BspTNI	GGTCTC	2 cut(s)	910, 1442
BsrDI	GCAATG	3 cut(s)	333, 374, 1896
BsrFI	RCCGGY	1 cut(s)	1672
BsrI	ACTGG	2 cut(s)	532, 1213
BssAI	RCCGGY	1 cut(s)	1672
BssECI	CCNNGG	7 cut(s)	16, 123, 124, 791, 826, 1452, 1516
BssNI	GRCGYC	1 cut(s)	681
BssT1I	CCWWGG	2 cut(s)	826, 1452
Bst2UI	CCWGG	5 cut(s)	125, 792, 843, 1076, 1115
Bst4CI	ACNGT	8 cut(s)	140, 518, 659, 940, 988, 1018, 1198, 1573
Bst6I	CTCTTC	1 cut(s)	122
BstACI	GRCGYC	1 cut(s)	681
BstBAI	YACGTR	1 cut(s)	206
BstBI	TTCGAA	1 cut(s)	644
BstC8I	GCNNGC	3 cut(s)	370, 1032, 1072
BstDEI	CTNAG	6 cut(s)	111, 164, 432, 488, 1647, 1825
BstF5I	GGATG	4 cut(s)	593, 643, 1123, 2033
BstFNI	CGCG	1 cut(s)	731
BstH2I	RGCGCY	3 cut(s)	213, 514, 684
BstHHI	GCGC	5 cut(s)	212, 513, 683, 1374, 1824
BstMAI	GTCTC	3 cut(s)	489, 910, 1442
BstMWI	GCNNNNNNNGC	8 cut(s)	158, 557, 566, 761, 843, 1865, 1921, 1930
BstNI	CCWGG	5 cut(s)	125, 792, 843, 1076, 1115
BstSCI	CCNGG	5 cut(s)	123, 790, 841, 1074, 1113
BstSFI	CTRYAG	2 cut(s)	514, 936
BstSLI	GKGCMC	3 cut(s)	25, 1704, 2004
BstUI	CGCG	1 cut(s)	731
BstV1I	GCAGC	4 cut(s)	535, 773, 1356, 1913
BstV2I	GAAGAC	2 cut(s)	64, 1772
BstX2I	RGATCY	4 cut(s)	128, 1630, 1942, 2007
BstXI	CCANNNNNNTGG	1 cut(s)	500
BstYI	RGATCY	4 cut(s)	128, 1630, 1942, 2007
BsuI	GTATCC	1 cut(s)	1097
BsuRI	GGCC	5 cut(s)	65, 1220, 1617, 1655, 1702
BtrI	CACGTC	1 cut(s)	1854
BtsCI	GGATG	4 cut(s)	593, 643, 1123, 2033
BtsIMutI	CAGTG	2 cut(s)	664, 945
Cac8I	GCNNGC	3 cut(s)	370, 1032, 1072
CciI	TCATGA	1 cut(s)	1177
CfoI	GCGC	5 cut(s)	212, 513, 683, 1374, 1824
Cfr10I	RCCGGY	1 cut(s)	1672
Cfr13I	GGNCC	3 cut(s)	1219, 1700, 1701
CseI	GACGC	1 cut(s)	720
Csp6I	GTAC	5 cut(s)	323, 443, 540, 984, 1277
CviAII	CATG	5 cut(s)	1109, 1178, 1406, 1445, 1889
CviQI	GTAC	5 cut(s)	323, 443, 540, 984, 1277
DdeI	CTNAG	6 cut(s)	111, 164, 432, 488, 1647, 1825
DinI	GGCGCC	1 cut(s)	682
EaeI	YGGCCR	1 cut(s)	1615
Eam1104I	CTCTTC	1 cut(s)	122
EarI	CTCTTC	1 cut(s)	122
EciI	GGCGGA	1 cut(s)	91
Ecl136II	GAGCTC	1 cut(s)	115
Eco130I	CCWWGG	2 cut(s)	826, 1452
Eco24I	GRGCYC	2 cut(s)	117, 1704
Eco31I	GGTCTC	2 cut(s)	910, 1442
Eco53kI	GAGCTC	1 cut(s)	115
Eco57I	CTGAAG	3 cut(s)	1206, 1859, 1955
Eco88I	CYCGRG	4 cut(s)	17, 182, 1517, 1546
EcoICRI	GAGCTC	1 cut(s)	115
EcoRII	CCWGG	5 cut(s)	123, 790, 841, 1074, 1113
EcoT14I	CCWWGG	2 cut(s)	826, 1452
EcoT38I	GRGCYC	2 cut(s)	117, 1704
EgeI	GGCGCC	1 cut(s)	682
EheI	GGCGCC	1 cut(s)	682
ErhI	CCWWGG	2 cut(s)	826, 1452
FaeI	CATG	5 cut(s)	1112, 1181, 1409, 1448, 1892
FaqI	GGGAC	1 cut(s)	896
FatI	CATG	5 cut(s)	1108, 1177, 1405, 1444, 1888
FauI	CCCGC	2 cut(s)	544, 1667
FauNDI	CATATG	1 cut(s)	53
FbaI	TGATCA	2 cut(s)	607, 706
Fnu4HI	GCNGC	6 cut(s)	63, 105, 549, 762, 1370, 1902
FokI	GGATG	4 cut(s)	580, 650, 1130, 2020
FriOI	GRGCYC	2 cut(s)	117, 1704
Fsp4HI	GCNGC	6 cut(s)	63, 105, 549, 762, 1370, 1902
FspBI	CTAG	3 cut(s)	380, 537, 1508
GlaI	GCGC	5 cut(s)	211, 512, 682, 1373, 1823
GluI	GCNGC	6 cut(s)	63, 105, 549, 762, 1370, 1902
GsuI	CTGGAG	3 cut(s)	597, 1230, 1347
HaeII	RGCGCY	3 cut(s)	213, 514, 684
HaeIII	GGCC	5 cut(s)	65, 1220, 1617, 1655, 1702
HapII	CCGG	3 cut(s)	1242, 1485, 1673
HgaI	GACGC	1 cut(s)	720
HhaI	GCGC	5 cut(s)	212, 513, 683, 1374, 1824
Hin1I	GRCGYC	1 cut(s)	681
Hin1II	CATG	5 cut(s)	1112, 1181, 1409, 1448, 1892
Hin6I	GCGC	5 cut(s)	210, 511, 681, 1372, 1822
HinP1I	GCGC	5 cut(s)	210, 511, 681, 1372, 1822
HincII	GTYRAC	3 cut(s)	289, 1528, 1681
HindII	GTYRAC	3 cut(s)	289, 1528, 1681
HindIII	AAGCTT	3 cut(s)	236, 647, 1742
HinfI	GANTC	6 cut(s)	89, 251, 712, 875, 1181, 1834
HpaI	GTTAAC	2 cut(s)	289, 1681
HpaII	CCGG	3 cut(s)	1242, 1485, 1673
HphI	GGTGA	3 cut(s)	86, 112, 1662
Hpy166II	GTNNAC	3 cut(s)	289, 1528, 1681
Hpy188III	TCNNGA	5 cut(s)	184, 342, 664, 1178, 1736
Hpy8I	GTNNAC	3 cut(s)	289, 1528, 1681
HpyAV	CCTTC	7 cut(s)	142, 310, 498, 1390, 1571, 1645, 1677
HpyCH4III	ACNGT	8 cut(s)	140, 518, 659, 940, 988, 1018, 1198, 1573
HpyCH4IV	ACGT	2 cut(s)	205, 1853
HpyCH4V	TGCA	4 cut(s)	368, 1265, 1337, 1901
HpyF10VI	GCNNNNNNNGC	8 cut(s)	158, 557, 566, 761, 843, 1865, 1921, 1930
HpyF3I	CTNAG	6 cut(s)	111, 164, 432, 488, 1647, 1825
HpySE526I	ACGT	2 cut(s)	205, 1853
Hsp92I	GRCGYC	1 cut(s)	681
Hsp92II	CATG	5 cut(s)	1112, 1181, 1409, 1448, 1892
HspAI	GCGC	5 cut(s)	210, 511, 681, 1372, 1822
KasI	GGCGCC	1 cut(s)	680
Ksp22I	TGATCA	2 cut(s)	607, 706
KspAI	GTTAAC	2 cut(s)	289, 1681
LguI	GCTCTTC	1 cut(s)	122
LmnI	GCTCC	3 cut(s)	39, 262, 1009
Lsp1109I	GCAGC	4 cut(s)	535, 773, 1356, 1913
LweI	GCATC	4 cut(s)	445, 602, 1045, 1570
MaeI	CTAG	3 cut(s)	380, 537, 1508
MaeII	ACGT	2 cut(s)	205, 1853
MaeIII	GTNAC	4 cut(s)	766, 1148, 1237, 1553
MboII	GAAGA	8 cut(s)	64, 109, 811, 814, 1166, 1199, 1772, 1852
MfeI	CAATTG	1 cut(s)	1385
MflI	RGATCY	4 cut(s)	128, 1630, 1942, 2007
MhlI	GDGCHC	6 cut(s)	25, 36, 117, 1006, 1704, 2004
MlsI	TGGCCA	1 cut(s)	1617
MluNI	TGGCCA	1 cut(s)	1617
Mly113I	GGCGCC	1 cut(s)	681
MlyI	GAGTC	3 cut(s)	83, 721, 869
MmeI	TCCRAC	5 cut(s)	111, 956, 1123, 1555, 1920
Mox20I	TGGCCA	1 cut(s)	1617
MroXI	GAANNNNTTC	2 cut(s)	1598, 1844
MscI	TGGCCA	1 cut(s)	1617
Msp20I	TGGCCA	1 cut(s)	1617
MspA1I	CMGCKG	1 cut(s)	764
MspI	CCGG	3 cut(s)	1242, 1485, 1673
MspR9I	CCNGG	5 cut(s)	125, 792, 843, 1076, 1115
MunI	CAATTG	1 cut(s)	1385
Mva1269I	GAATGC	2 cut(s)	837, 1267
MvaI	CCWGG	5 cut(s)	125, 792, 843, 1076, 1115
MvnI	CGCG	1 cut(s)	731
MwoI	GCNNNNNNNGC	8 cut(s)	158, 557, 566, 761, 843, 1865, 1921, 1930
NarI	GGCGCC	1 cut(s)	681
NdeI	CATATG	1 cut(s)	53
NlaIII	CATG	5 cut(s)	1112, 1181, 1409, 1448, 1892
NlaIV	GGNNCC	6 cut(s)	130, 682, 789, 1702, 1734, 2009
NmuCI	GTSAC	1 cut(s)	766
NspV	TTCGAA	1 cut(s)	644
PagI	TCATGA	1 cut(s)	1177
PasI	CCCWGGG	1 cut(s)	124
PciSI	GCTCTTC	1 cut(s)	122
PctI	GAATGC	2 cut(s)	837, 1267
PdmI	GAANNNNTTC	2 cut(s)	1598, 1844
PfeI	GAWTC	3 cut(s)	251, 1181, 1834
PflFI	GACNNNGTC	1 cut(s)	659
PflMI	CCANNNNNTGG	2 cut(s)	1114, 1799
PfoI	TCCNGGA	1 cut(s)	1113
PkrI	GCNGC	6 cut(s)	64, 106, 550, 763, 1371, 1903
PleI	GAGTC	3 cut(s)	83, 720, 869
PluTI	GGCGCC	1 cut(s)	684
PpsI	GAGTC	3 cut(s)	83, 720, 869
Ppu21I	YACGTR	1 cut(s)	206
Psp124BI	GAGCTC	1 cut(s)	117
Psp6I	CCWGG	5 cut(s)	123, 790, 841, 1074, 1113
PspGI	CCWGG	5 cut(s)	123, 790, 841, 1074, 1113
PspN4I	GGNNCC	6 cut(s)	130, 682, 789, 1702, 1734, 2009
PspOMI	GGGCCC	1 cut(s)	1700
PspPI	GGNCC	3 cut(s)	1219, 1700, 1701
PsuI	RGATCY	4 cut(s)	128, 1630, 1942, 2007
PsyI	GACNNNGTC	1 cut(s)	659
PvuII	CAGCTG	1 cut(s)	764
RsaI	GTAC	5 cut(s)	324, 444, 541, 985, 1278
RsaNI	GTAC	5 cut(s)	323, 443, 540, 984, 1277
SacI	GAGCTC	1 cut(s)	117
SapI	GCTCTTC	1 cut(s)	122
SatI	GCNGC	6 cut(s)	63, 105, 549, 762, 1370, 1902
Sau96I	GGNCC	3 cut(s)	1219, 1700, 1701
ScaI	AGTACT	1 cut(s)	324
SchI	GAGTC	3 cut(s)	83, 721, 869
ScrFI	CCNGG	5 cut(s)	125, 792, 843, 1076, 1115
SduI	GDGCHC	6 cut(s)	25, 36, 117, 1006, 1704, 2004
SfaNI	GCATC	4 cut(s)	445, 602, 1045, 1570
SfcI	CTRYAG	2 cut(s)	514, 936
SfoI	GGCGCC	1 cut(s)	682
SfuI	TTCGAA	1 cut(s)	644
SmlI	CTYRAG	3 cut(s)	326, 968, 1082
SmoI	CTYRAG	3 cut(s)	326, 968, 1082
SsiI	CCGC	6 cut(s)	62, 102, 105, 551, 729, 1660
SspDI	GGCGCC	1 cut(s)	680
SspMI	CTAG	3 cut(s)	380, 537, 1508
SstI	GAGCTC	1 cut(s)	117
StyD4I	CCNGG	5 cut(s)	123, 790, 841, 1074, 1113
StyI	CCWWGG	2 cut(s)	826, 1452
TaaI	ACNGT	8 cut(s)	140, 518, 659, 940, 988, 1018, 1198, 1573
TaiI	ACGT	2 cut(s)	208, 1856
TaqI	TCGA	5 cut(s)	135, 644, 663, 742, 1089
TatI	WGTACW	3 cut(s)	322, 442, 1276
TauI	GCSGC	2 cut(s)	65, 107
TfiI	GAWTC	3 cut(s)	251, 1181, 1834
TscAI	CASTG	2 cut(s)	664, 945
TseFI	GTSAC	1 cut(s)	766
TseI	GCWGC	4 cut(s)	548, 761, 1369, 1901
Tsp45I	GTSAC	1 cut(s)	766
TspDTI	ATGAA	6 cut(s)	171, 576, 711, 936, 1166, 1206
TspGWI	ACGGA	2 cut(s)	58, 898
TspRI	CASTG	2 cut(s)	664, 945
Tth111I	GACNNNGTC	1 cut(s)	659
Van91I	CCANNNNNTGG	2 cut(s)	1114, 1799
XapI	RAATTY	3 cut(s)	818, 1269, 1493
XmnI	GAANNNNTTC	2 cut(s)	1598, 1844
XspI	CTAG	3 cut(s)	380, 537, 1508
ZrmI	AGTACT	1 cut(s)	324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.