Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0008804

Physical Location & Seq

Genomic Coordinates Forward (+)

53674809 .. 53682200

Gene Structure 7392 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG307700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGGGCCTCCATCCACAACGGGGTCGAAGTCAAAAACTCCATCAAGCCCATCCCAACCAAAAAAGCCCAAAGCAGGACAAAAACGGAACCAACAGTCACGGTCTCGTTCTTCTTCACTCCTTTACATTCCCTCTCTCACTCACAGTAGTCGTCGCACCCGTAGACTCCGCACCACTGACCAAACTCTCTCTCTCTTTGAGAATGGCTACCCGAACCCTCGGGGCACTTGTGGTGCTCCTTTTGGCGATTACGATATGCGAAGCGGCCTCCGTCTTCCACCCGATCTCCGAATCTCACCGATCCGTCGTTTCTGAGCTCTTCACCCAGGGATCCTTCGACAGTTTAGAAGAGGCGTATGAAGCCCTGAGATCGTTTGAGGTTCTCGGGATTGATAAGCCTGATATACGTGGCGCTACTTGTAAGTCTGTTGTGGAAAAGCTTGGATCATCGGAATCTGCTCCAAAAGACTTGTTCTATGCCTTAAAGGTTAACAGCATTTTGAAGTGTGGGGTTAAGAAGGAAGTACTTGAGGGCATTGCTTCAAGACTTAAAGCTGTGGTAAATGGTGCAAGCTCATTGCTAGACATCTATTACTCTATTGGCAGTTTGGTGCTTATTAAGGATCAAACTTCTGAGGTTGATGTACTTCTTGCTGATGCTGATGGCATTTTCCGATCTATCAAGTCTCTGAGCCAGAGTGATGGAAGGTGGCGCTACAGTTCAGATAATCCCCAGTCTAGTACCTATGCTGCTGGATTAGCGATTGAAGCACTTGCTGGAGTTGTTTCATTAGCATCCTCTGAAATTGATCAGTCTATGATTGGGAAATTAAAAAGGGATGTTTCGAAGCTTTTTGACAGTGTCGAGAAATATGATGATGGCGCCTTTTATTTTGATGAAAAAGTTGATCAGAGTCCTCTTTCAACTACCGCGTCAGTTGTTCGAGGGCTGACAGCGTTAGCAGCTGTGACGTCTGAAAAGTTAAAGGTTCCAGGGGAGAAGATTTTGGGTTTGGCAAAATTCTTCCTTGGGATTGGCATTCCAGGCAATAATAAAGATTTCTTTAACCAGATTGACTCTTTAGCTTCTTTGGAAAGCAATAAGGTCTCCGTCCCTCTGATTTTATCGCTTCCAACTACAGTGCTTTCATTGACTAAAAAAGACCAGCTCAAGGTTAAAGTCGGTACTGTGCTTGGATCAAGTGCTCCTCCTCTGACCGTTAAATTGATGCGAGCTTTCAGTTCTGGTTCAAAAGATGCTTCCATTATTGCCAGCCAGGAACTCAAGTTCGATAAAGAAAGTGGATACCATGTCCTGGATGTTTTGCCAAAAAGTGTTGATGTTGGAAGTTACATATTTGTCTTTGAGGTTGTTCTTCATGATTCTGAAGACGAAATCGTTTATACAACTGGAGGTTTGGCCCAAGTAGATGTATTTGTTACCGGAGTTATCAATATAGAGAATGCAGAAATTTCTGTACTTGAAAGCGATAAGAGTGTAGAAACCCAGAAAAAATTAGATTTAGCTGGAGAAAATGCAGTTTCACTATCAGCAAACCACCTCCAAAAGCTGCGCCTATCCTTTCAATTGACTACTCCTTTGGGTCATGCTTTTAAGCCACATCAGGTGTTTCTCAAATTGACACATGAGACCAAGGTTGAACATATATTTGTGGTGGGGAACTCCGGCAAAAAATTTGAGAAAATACTAGATTTCCTCGGGTTGGTTGACAAGTTTTACTATCTCTCGGGTAGTTACGACCTTCAATTAACTGTTGGAGATGCTGTAATGGAGAACTCTTTCTTACGGGCTATTGGCCACATTGATTTAGATCTACCAGAAGCACCTGAGAAGGCCACCCGCCCTCCTTCACCGGCTGTTAACCCTTTATTAAAGTATGGGCCCAAAGCAGAGATAAGCCATATTTTCAGGGTTCCAGAGAAGCTTCCTCCTAACCATCTCTCTCTTGCTTTCTTGGGTCTTCTGCTTTTGCCATTGATTGGATTTTTGGTTGGGCTATTGCGCTTAGGAGTGAATCTGAAGAACTTCCCCACGTCAGCAGTTCCAGCCACCTTTGGTATTCTATTTCATGTTGGCATTGCAGCAGTTCTTTTGCTCTATGTGCTTTTCTGGCTGAAGTTGGATCTATTTACAACCCTGAAATGGCTTGGATTGTTGGGAGTTTTCTTGCTGTTTGTGGGGCACAGGATCCTTTCCCATCTCGCCTCTACATCATCCAAGTTGAAATCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005794 GO:0005886 GO:0005911 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008250 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009266 GO:0009409 GO:0009505 GO:0009506 GO:0009628 GO:0009987 GO:0012505 GO:0016020 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0030054 GO:0030312 GO:0031090 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0070085 GO:0071704 GO:0071944 GO:0098588 GO:0098796 GO:0098805 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 ko04144 map00510 map00513 map01100 map04141 map04144

Pfam Domains

Protein Families

Ribophorin_II

Protein Analysis

751

Amino Acids

81.37

Weight (kDa)

7.34

Isoelectric Point (pI)

33.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribophorin_II	PF05817	95 - 365	1.7e-58	Ribophorin II N-terminal domain
Ribophorin_II_2nd	PF23861	373 - 480	7e-21	Ribophorin II second domain
Ribophorin_II_3rd	PF23860	487 - 610	5.8e-39	Ribophorin II third domain
Ribophorin_II_C	PF25147	643 - 743	5.7e-24	Ribophorin_II, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21150 AT4G21150 AT4G21150
fragaria_vesca	FvH4_2g21250 FvH4_2g21250 FvH4_2g21250 FvH4_2g21250 FvH4_2g21250
malus_domestica	MD05G1194900.v1.1 MD10G1181500.v1.1
prunus_persica	Prupe.8G221600_v2.0.a1
pyrus_communis	pycom05g18220
rosa_chinensis	RchiOBHm_Chr6g0287811
rosa_laevigata	RLG00000012466
rosa_multiflora	Rmu_sc0003335.1_g000010 Rmu_sc0003877.1_g000006 Rmu_sc0006738.1_g000001
rosa_roxburghii	Rroxscaffold_7G00180780
rosa_rugosa	Rorug06G0191800 Rorug06G0191800
rosa_samantha	Rh6AG301700 Rh6BG307700
rosa_wichuraiana	Rw6G026060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	974
AccB1I	GGYRCC	1 cut(s)	881
AccB7I	CCANNNNNTGG	2 cut(s)	1315, 2000
AccI	GTMKAC	1 cut(s)	162
AccII	CGCG	1 cut(s)	932
AciI	CCGC	4 cut(s)	168, 263, 930, 1861
AclWI	GGATC	9 cut(s)	294, 324, 337, 451, 630, 1204, 2151, 2203, 2216
AcoI	YGGCCR	1 cut(s)	1816
AcsI	RAATTY	3 cut(s)	1019, 1470, 1694
AcuI	CTGAAG	3 cut(s)	1407, 2060, 2156
AcyI	GRCGYC	2 cut(s)	882, 971
AfaI	GTAC	5 cut(s)	525, 645, 742, 1186, 1479
AfiI	CCNNNNNNNGG	7 cut(s)	20, 73, 1171, 1315, 1723, 2000, 2163
AjiI	CACGTC	1 cut(s)	2055
AjnI	CCWGG	5 cut(s)	324, 991, 1042, 1275, 1314
AloI	GAACNNNNNNTCC	2 cut(s)	1271, 1303
Alw21I	GWGCWC	3 cut(s)	237, 318, 1207
Alw26I	GTCTC	4 cut(s)	107, 690, 1111, 1643
AlwI	GGATC	9 cut(s)	294, 324, 337, 451, 630, 1204, 2151, 2203, 2216
Ama87I	CYCGRG	4 cut(s)	218, 383, 1718, 1747
AoxI	GGCC	6 cut(s)	4, 264, 1419, 1816, 1854, 1901
ApaI	GGGCCC	1 cut(s)	1905
ApeKI	GCWGC	4 cut(s)	749, 962, 1570, 2102
ApoI	RAATTY	3 cut(s)	1019, 1470, 1694
ArsI	GACNNNNNNTTYG	2 cut(s)	1582, 1614
Asp700I	GAANNNNTTC	2 cut(s)	1799, 2045
AspLEI	GCGC	5 cut(s)	413, 714, 884, 1575, 2025
AspS9I	GGNCC	4 cut(s)	4, 1420, 1901, 1902
AsuHPI	GGTGA	3 cut(s)	287, 313, 1863
AsuII	TTCGAA	1 cut(s)	845
AvaI	CYCGRG	4 cut(s)	218, 383, 1718, 1747
BaeGI	GKGCMC	3 cut(s)	226, 1905, 2205
BalI	TGGCCA	1 cut(s)	1818
BamHI	GGATCC	2 cut(s)	329, 2208
BanI	GGYRCC	1 cut(s)	881
BanII	GRGCYC	2 cut(s)	318, 1905
BbsI	GAAGAC	3 cut(s)	265, 1395, 1973
Bbv12I	GWGCWC	3 cut(s)	237, 318, 1207
BbvI	GCAGC	4 cut(s)	736, 974, 1557, 2114
BccI	CCATC	8 cut(s)	18, 48, 57, 656, 695, 872, 1965, 2226
BciT130I	CCWGG	5 cut(s)	326, 993, 1044, 1277, 1316
BciVI	GTATCC	1 cut(s)	1298
BclI	TGATCA	2 cut(s)	808, 907
BcoDI	GTCTC	4 cut(s)	107, 690, 1111, 1643
BfaI	CTAG	3 cut(s)	581, 738, 1709
BfmI	CTRYAG	2 cut(s)	715, 1137
BfoI	RGCGCY	3 cut(s)	414, 715, 885
BfuI	GTATCC	1 cut(s)	1298
BglII	AGATCT	1 cut(s)	1831
BisI	GCNGC	5 cut(s)	264, 750, 963, 1571, 2103
BlsI	GCNGC	5 cut(s)	265, 751, 964, 1572, 2104
BmcAI	AGTACT	1 cut(s)	525
Bme1390I	CCNGG	5 cut(s)	326, 993, 1044, 1277, 1316
BmeT110I	CYCGRG	4 cut(s)	218, 383, 1718, 1747
BmgBI	CACGTC	1 cut(s)	2055
BmgT120I	GGNCC	4 cut(s)	4, 1420, 1901, 1902
BmiI	GGNNCC	7 cut(s)	88, 331, 883, 990, 1903, 1935, 2210
BmrFI	CCNGG	5 cut(s)	326, 993, 1044, 1277, 1316
BmrI	ACTGGG	1 cut(s)	727
BmsI	GCATC	5 cut(s)	646, 803, 1218, 1246, 1771
BmuI	ACTGGG	1 cut(s)	727
BpiI	GAAGAC	3 cut(s)	265, 1395, 1973
BpmI	CTGGAG	3 cut(s)	798, 1431, 1548
Bpu10I	CCTNAGC	1 cut(s)	2026
Bpu14I	TTCGAA	1 cut(s)	845
BpuEI	CTTGAG	3 cut(s)	548, 1154, 1268
BsaAI	YACGTR	1 cut(s)	407
BsaBI	GATNNNNATC	1 cut(s)	1830
BsaHI	GRCGYC	2 cut(s)	882, 971
BsaI	GGTCTC	3 cut(s)	107, 1111, 1643
BsaJI	CCNNGG	7 cut(s)	217, 324, 325, 992, 1027, 1653, 1717
BsaWI	WCCGGW	1 cut(s)	1442
BsaXI	ACNNNNNCTCC	6 cut(s)	269, 299, 1770, 1800, 1849, 1879
Bsc4I	CCNNNNNNNGG	7 cut(s)	20, 73, 1171, 1315, 1723, 2000, 2163
Bse118I	RCCGGY	1 cut(s)	1873
Bse1I	ACTGG	2 cut(s)	733, 1414
Bse3DI	GCAATG	3 cut(s)	534, 575, 2097
Bse8I	GATNNNNATC	1 cut(s)	1830
BseBI	CCWGG	5 cut(s)	326, 993, 1044, 1277, 1316
BseDI	CCNNGG	7 cut(s)	217, 324, 325, 992, 1027, 1653, 1717
BseGI	GGATG	6 cut(s)	10, 49, 794, 844, 1324, 2234
BseJI	GATNNNNATC	1 cut(s)	1830
BseLI	CCNNNNNNNGG	7 cut(s)	20, 73, 1171, 1315, 1723, 2000, 2163
BseMI	GCAATG	3 cut(s)	534, 575, 2097
BseMII	CTCAG	5 cut(s)	303, 356, 624, 680, 1839
BseNI	ACTGG	2 cut(s)	733, 1414
BseRI	GAGGAG	2 cut(s)	1197, 1200
BseSI	GKGCMC	3 cut(s)	226, 1905, 2205
BseXI	GCAGC	4 cut(s)	736, 974, 1557, 2114
Bsh1236I	CGCG	1 cut(s)	932
BshFI	GGCC	6 cut(s)	6, 266, 1421, 1818, 1856, 1903
BshNI	GGYRCC	1 cut(s)	881
BsiHKAI	GWGCWC	3 cut(s)	237, 318, 1207
BsiHKCI	CYCGRG	4 cut(s)	218, 383, 1718, 1747
BsiSI	CCGG	3 cut(s)	1443, 1686, 1874
BslFI	GGGAC	1 cut(s)	1097
BslI	CCNNNNNNNGG	7 cut(s)	20, 73, 1171, 1315, 1723, 2000, 2163
BsmAI	GTCTC	4 cut(s)	107, 690, 1111, 1643
BsmFI	GGGAC	1 cut(s)	1097
BsmI	GAATGC	2 cut(s)	1038, 1468
BsnI	GGCC	6 cut(s)	6, 266, 1421, 1818, 1856, 1903
Bso31I	GGTCTC	3 cut(s)	107, 1111, 1643
BsoBI	CYCGRG	4 cut(s)	218, 383, 1718, 1747
Bsp119I	TTCGAA	1 cut(s)	845
Bsp120I	GGGCCC	1 cut(s)	1901
Bsp1286I	GDGCHC	6 cut(s)	226, 237, 318, 1207, 1905, 2205
BspACI	CCGC	4 cut(s)	168, 263, 930, 1861
BspANI	GGCC	6 cut(s)	6, 266, 1421, 1818, 1856, 1903
BspCNI	CTCAG	5 cut(s)	304, 357, 625, 681, 1840
BspFNI	CGCG	1 cut(s)	932
BspHI	TCATGA	1 cut(s)	1378
BspLI	GGNNCC	7 cut(s)	88, 331, 883, 990, 1903, 1935, 2210
BspPI	GGATC	9 cut(s)	294, 324, 337, 451, 630, 1204, 2151, 2203, 2216
BspQI	GCTCTTC	1 cut(s)	323
BspT104I	TTCGAA	1 cut(s)	845
BspT107I	GGYRCC	1 cut(s)	881
BspTNI	GGTCTC	3 cut(s)	107, 1111, 1643
BsrDI	GCAATG	3 cut(s)	534, 575, 2097
BsrFI	RCCGGY	1 cut(s)	1873
BsrI	ACTGG	2 cut(s)	733, 1414
BssAI	RCCGGY	1 cut(s)	1873
BssECI	CCNNGG	7 cut(s)	217, 324, 325, 992, 1027, 1653, 1717
BssNI	GRCGYC	2 cut(s)	882, 971
BssT1I	CCWWGG	2 cut(s)	1027, 1653
Bst2UI	CCWGG	5 cut(s)	326, 993, 1044, 1277, 1316
Bst6I	CTCTTC	2 cut(s)	323, 342
BstACI	GRCGYC	2 cut(s)	882, 971
BstBAI	YACGTR	1 cut(s)	407
BstBI	TTCGAA	1 cut(s)	845
BstC8I	GCNNGC	3 cut(s)	571, 1233, 1273
BstDEI	CTNAG	6 cut(s)	312, 365, 633, 689, 1848, 2026
BstF5I	GGATG	6 cut(s)	10, 49, 794, 844, 1324, 2234
BstFNI	CGCG	1 cut(s)	932
BstH2I	RGCGCY	3 cut(s)	414, 715, 885
BstHHI	GCGC	5 cut(s)	413, 714, 884, 1575, 2025
BstMAI	GTCTC	4 cut(s)	107, 690, 1111, 1643
BstMWI	GCNNNNNNNGC	8 cut(s)	359, 758, 767, 962, 1044, 2066, 2122, 2131
BstNI	CCWGG	5 cut(s)	326, 993, 1044, 1277, 1316
BstSCI	CCNGG	5 cut(s)	324, 991, 1042, 1275, 1314
BstSFI	CTRYAG	2 cut(s)	715, 1137
BstSLI	GKGCMC	3 cut(s)	226, 1905, 2205
BstUI	CGCG	1 cut(s)	932
BstV1I	GCAGC	4 cut(s)	736, 974, 1557, 2114
BstV2I	GAAGAC	3 cut(s)	265, 1395, 1973
BstX2I	RGATCY	4 cut(s)	329, 1831, 2143, 2208
BstXI	CCANNNNNNTGG	1 cut(s)	701
BstYI	RGATCY	4 cut(s)	329, 1831, 2143, 2208
BsuI	GTATCC	1 cut(s)	1298
BsuRI	GGCC	6 cut(s)	6, 266, 1421, 1818, 1856, 1903
BtrI	CACGTC	1 cut(s)	2055
BtsCI	GGATG	6 cut(s)	10, 49, 794, 844, 1324, 2234
BtsIMutI	CAGTG	3 cut(s)	173, 865, 1146
Cac8I	GCNNGC	3 cut(s)	571, 1233, 1273
CciI	TCATGA	1 cut(s)	1378
CfoI	GCGC	5 cut(s)	413, 714, 884, 1575, 2025
Cfr10I	RCCGGY	1 cut(s)	1873
Cfr13I	GGNCC	4 cut(s)	4, 1420, 1901, 1902
CseI	GACGC	1 cut(s)	921
Csp6I	GTAC	5 cut(s)	524, 644, 741, 1185, 1478
CviAII	CATG	5 cut(s)	1310, 1379, 1607, 1646, 2090
CviQI	GTAC	5 cut(s)	524, 644, 741, 1185, 1478
DdeI	CTNAG	6 cut(s)	312, 365, 633, 689, 1848, 2026
DinI	GGCGCC	1 cut(s)	883
EaeI	YGGCCR	1 cut(s)	1816
Eam1104I	CTCTTC	2 cut(s)	323, 342
EarI	CTCTTC	2 cut(s)	323, 342
Ecl136II	GAGCTC	1 cut(s)	316
Eco130I	CCWWGG	2 cut(s)	1027, 1653
Eco24I	GRGCYC	2 cut(s)	318, 1905
Eco31I	GGTCTC	3 cut(s)	107, 1111, 1643
Eco53kI	GAGCTC	1 cut(s)	316
Eco57I	CTGAAG	3 cut(s)	1407, 2060, 2156
Eco88I	CYCGRG	4 cut(s)	218, 383, 1718, 1747
EcoICRI	GAGCTC	1 cut(s)	316
EcoRII	CCWGG	5 cut(s)	324, 991, 1042, 1275, 1314
EcoT14I	CCWWGG	2 cut(s)	1027, 1653
EcoT38I	GRGCYC	2 cut(s)	318, 1905
EgeI	GGCGCC	1 cut(s)	883
EheI	GGCGCC	1 cut(s)	883
ErhI	CCWWGG	2 cut(s)	1027, 1653
FaeI	CATG	5 cut(s)	1313, 1382, 1610, 1649, 2093
FaqI	GGGAC	1 cut(s)	1097
FatI	CATG	5 cut(s)	1309, 1378, 1606, 1645, 2089
FauI	CCCGC	1 cut(s)	1868
FbaI	TGATCA	2 cut(s)	808, 907
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	5 cut(s)	264, 750, 963, 1571, 2103
FokI	GGATG	5 cut(s)	36, 781, 851, 1331, 2221
FriOI	GRGCYC	2 cut(s)	318, 1905
Fsp4HI	GCNGC	5 cut(s)	264, 750, 963, 1571, 2103
FspBI	CTAG	3 cut(s)	581, 738, 1709
GlaI	GCGC	5 cut(s)	412, 713, 883, 1574, 2024
GluI	GCNGC	5 cut(s)	264, 750, 963, 1571, 2103
GsuI	CTGGAG	3 cut(s)	798, 1431, 1548
HaeII	RGCGCY	3 cut(s)	414, 715, 885
HaeIII	GGCC	6 cut(s)	6, 266, 1421, 1818, 1856, 1903
HapII	CCGG	3 cut(s)	1443, 1686, 1874
HgaI	GACGC	1 cut(s)	921
HhaI	GCGC	5 cut(s)	413, 714, 884, 1575, 2025
Hin1I	GRCGYC	2 cut(s)	882, 971
Hin1II	CATG	5 cut(s)	1313, 1382, 1610, 1649, 2093
Hin6I	GCGC	5 cut(s)	411, 712, 882, 1573, 2023
HinP1I	GCGC	5 cut(s)	411, 712, 882, 1573, 2023
HincII	GTYRAC	3 cut(s)	490, 1729, 1882
HindII	GTYRAC	3 cut(s)	490, 1729, 1882
HindIII	AAGCTT	3 cut(s)	437, 848, 1943
HinfI	GANTC	7 cut(s)	164, 290, 452, 913, 1076, 1382, 2035
HpaI	GTTAAC	2 cut(s)	490, 1882
HpaII	CCGG	3 cut(s)	1443, 1686, 1874
HphI	GGTGA	3 cut(s)	287, 313, 1863
Hpy166II	GTNNAC	4 cut(s)	163, 490, 1729, 1882
Hpy188III	TCNNGA	5 cut(s)	385, 543, 865, 1379, 1937
Hpy8I	GTNNAC	4 cut(s)	163, 490, 1729, 1882
Hpy99I	CGWCG	2 cut(s)	155, 308
HpyAV	CCTTC	6 cut(s)	343, 511, 699, 1772, 1846, 1878
HpyCH4IV	ACGT	3 cut(s)	406, 971, 2054
HpyCH4V	TGCA	4 cut(s)	569, 1466, 1538, 2102
HpyF10VI	GCNNNNNNNGC	8 cut(s)	359, 758, 767, 962, 1044, 2066, 2122, 2131
HpyF3I	CTNAG	6 cut(s)	312, 365, 633, 689, 1848, 2026
HpySE526I	ACGT	3 cut(s)	406, 971, 2054
Hsp92I	GRCGYC	2 cut(s)	882, 971
Hsp92II	CATG	5 cut(s)	1313, 1382, 1610, 1649, 2093
HspAI	GCGC	5 cut(s)	411, 712, 882, 1573, 2023
KasI	GGCGCC	1 cut(s)	881
Ksp22I	TGATCA	2 cut(s)	808, 907
KspAI	GTTAAC	2 cut(s)	490, 1882
LguI	GCTCTTC	1 cut(s)	323
LmnI	GCTCC	3 cut(s)	240, 463, 1210
Lsp1109I	GCAGC	4 cut(s)	736, 974, 1557, 2114
LweI	GCATC	5 cut(s)	646, 803, 1218, 1246, 1771
MaeI	CTAG	3 cut(s)	581, 738, 1709
MaeII	ACGT	3 cut(s)	406, 971, 2054
MaeIII	GTNAC	5 cut(s)	95, 967, 1349, 1438, 1754
MfeI	CAATTG	1 cut(s)	1586
MflI	RGATCY	4 cut(s)	329, 1831, 2143, 2208
MhlI	GDGCHC	6 cut(s)	226, 237, 318, 1207, 1905, 2205
MlsI	TGGCCA	1 cut(s)	1818
MluNI	TGGCCA	1 cut(s)	1818
Mly113I	GGCGCC	1 cut(s)	882
MlyI	GAGTC	3 cut(s)	158, 922, 1070
MmeI	TCCRAC	4 cut(s)	1157, 1324, 1756, 2121
Mox20I	TGGCCA	1 cut(s)	1818
MroXI	GAANNNNTTC	2 cut(s)	1799, 2045
MscI	TGGCCA	1 cut(s)	1818
Msp20I	TGGCCA	1 cut(s)	1818
MspA1I	CMGCKG	1 cut(s)	965
MspI	CCGG	3 cut(s)	1443, 1686, 1874
MspR9I	CCNGG	5 cut(s)	326, 993, 1044, 1277, 1316
MunI	CAATTG	1 cut(s)	1586
Mva1269I	GAATGC	2 cut(s)	1038, 1468
MvaI	CCWGG	5 cut(s)	326, 993, 1044, 1277, 1316
MvnI	CGCG	1 cut(s)	932
MwoI	GCNNNNNNNGC	8 cut(s)	359, 758, 767, 962, 1044, 2066, 2122, 2131
NarI	GGCGCC	1 cut(s)	882
NlaIII	CATG	5 cut(s)	1313, 1382, 1610, 1649, 2093
NlaIV	GGNNCC	7 cut(s)	88, 331, 883, 990, 1903, 1935, 2210
NmuCI	GTSAC	2 cut(s)	95, 967
NspV	TTCGAA	1 cut(s)	845
PagI	TCATGA	1 cut(s)	1378
PasI	CCCWGGG	1 cut(s)	325
PciSI	GCTCTTC	1 cut(s)	323
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PctI	GAATGC	2 cut(s)	1038, 1468
PdmI	GAANNNNTTC	2 cut(s)	1799, 2045
PfeI	GAWTC	4 cut(s)	290, 452, 1382, 2035
PflFI	GACNNNGTC	1 cut(s)	860
PflMI	CCANNNNNTGG	2 cut(s)	1315, 2000
PfoI	TCCNGGA	1 cut(s)	1314
PkrI	GCNGC	5 cut(s)	265, 751, 964, 1572, 2104
PleI	GAGTC	3 cut(s)	158, 921, 1070
PluTI	GGCGCC	1 cut(s)	885
PpsI	GAGTC	3 cut(s)	158, 921, 1070
Ppu21I	YACGTR	1 cut(s)	407
Psp124BI	GAGCTC	1 cut(s)	318
Psp6I	CCWGG	5 cut(s)	324, 991, 1042, 1275, 1314
PspGI	CCWGG	5 cut(s)	324, 991, 1042, 1275, 1314
PspN4I	GGNNCC	7 cut(s)	88, 331, 883, 990, 1903, 1935, 2210
PspOMI	GGGCCC	1 cut(s)	1901
PspPI	GGNCC	4 cut(s)	4, 1420, 1901, 1902
PsuI	RGATCY	4 cut(s)	329, 1831, 2143, 2208
PsyI	GACNNNGTC	1 cut(s)	860
PvuII	CAGCTG	1 cut(s)	965
RsaI	GTAC	5 cut(s)	525, 645, 742, 1186, 1479
RsaNI	GTAC	5 cut(s)	524, 644, 741, 1185, 1478
SacI	GAGCTC	1 cut(s)	318
SapI	GCTCTTC	1 cut(s)	323
SatI	GCNGC	5 cut(s)	264, 750, 963, 1571, 2103
Sau96I	GGNCC	4 cut(s)	4, 1420, 1901, 1902
ScaI	AGTACT	1 cut(s)	525
SchI	GAGTC	3 cut(s)	158, 922, 1070
ScrFI	CCNGG	5 cut(s)	326, 993, 1044, 1277, 1316
SduI	GDGCHC	6 cut(s)	226, 237, 318, 1207, 1905, 2205
SfaNI	GCATC	5 cut(s)	646, 803, 1218, 1246, 1771
SfcI	CTRYAG	2 cut(s)	715, 1137
SfoI	GGCGCC	1 cut(s)	883
SfuI	TTCGAA	1 cut(s)	845
SmlI	CTYRAG	3 cut(s)	527, 1169, 1283
SmoI	CTYRAG	3 cut(s)	527, 1169, 1283
SsiI	CCGC	4 cut(s)	168, 263, 930, 1861
SspDI	GGCGCC	1 cut(s)	881
SspMI	CTAG	3 cut(s)	581, 738, 1709
SstI	GAGCTC	1 cut(s)	318
StyD4I	CCNGG	5 cut(s)	324, 991, 1042, 1275, 1314
StyI	CCWWGG	2 cut(s)	1027, 1653
TaiI	ACGT	3 cut(s)	409, 974, 2057
TaqI	TCGA	6 cut(s)	25, 336, 845, 864, 943, 1290
TatI	WGTACW	3 cut(s)	523, 643, 1477
TauI	GCSGC	1 cut(s)	266
TfiI	GAWTC	4 cut(s)	290, 452, 1382, 2035
TscAI	CASTG	3 cut(s)	180, 865, 1146
TseFI	GTSAC	2 cut(s)	95, 967
TseI	GCWGC	4 cut(s)	749, 962, 1570, 2102
Tsp45I	GTSAC	2 cut(s)	95, 967
TspDTI	ATGAA	6 cut(s)	372, 777, 912, 1137, 1367, 2078
TspGWI	ACGGA	4 cut(s)	99, 259, 292, 1099
TspRI	CASTG	3 cut(s)	180, 865, 1146
Tth111I	GACNNNGTC	1 cut(s)	860
Van91I	CCANNNNNTGG	2 cut(s)	1315, 2000
XapI	RAATTY	3 cut(s)	1019, 1470, 1694
XmiI	GTMKAC	1 cut(s)	162
XmnI	GAANNNNTTC	2 cut(s)	1799, 2045
XspI	CTAG	3 cut(s)	581, 738, 1709
ZraI	GACGTC	1 cut(s)	972
ZrmI	AGTACT	1 cut(s)	525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.