Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0006730

Physical Location & Seq

Genomic Coordinates Forward (+)

571794 .. 574389

Gene Structure 2596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g00620.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGTACTCTGGGAGACCATCTGGTGAAGAATCTCTTCATCAAGATTTTGAAGCTTTGAGTGTATCGAAGTGTCTGATGAGAAATGTTAGCCAGAAGTTGAGGAAGAAGAATCAGAGGTCTGTAGGAGATGAGGACGATGGTGTGAGGGGAATAGCTTTGAGATGTCTTACTCTGTATGGAAGGGGTGGAGGTTGCAAAGTAGGTGCTGACACATGTGATGATTTTGGGGATACGAGTAACAGGAGGAGGTCAAGTGCCAGCGATGAAGGCAAGGGATACAGACCAATATGTGGTACCGAGGAATCTGGAGTGGATTGCTTCTCGTATGGGGTGAGGGAGAAATTTTGGAAGAAACATAACAGAAAGGATTTTGAGCTTGAAGAATCAATTAGAAATAGCAGGATGCACATTTTTCTTCCAGACGACATACTGGAAATGTGCTTGGTGAGGCTCCCACTAACCAGTCTCATGACTGCACGCCTCGTGTGCAAGAAATGGAAACACTTGACTACTACTACTCGGTTCCTGCAGATGAGACAGGAAGGCTCACATCAGACCCCATGGTTGTTTCATTTTGGTGCTGTTAAAGATGGTTATTGCTCTGGTGAGATACATGCATTGGATGTGTCTCTAAATCAATGGCATAGTATAGATGCTGAAATCCTAAAGGGAAGGTTCATGTTTTCTGTTGCTAGTGTCCAGGATGATATTTATGTTGTTGGGGGTTGTTCGAGCTTGAACAACTTTGGGAGGGTGGATAGGAGCTCATTTAAGACACACAAAGGGGTGATGCTGTTTAGTCCCTTAACAAAATCTTGGCGCAAAGTTGCTCCAATGAAGCATGCAAGATCAATGCCTATTTTAGGAGTCTCAGAGGTCACTTCAGATTTTTCCACCAGTCAAAGTTATCAAAGTCGCCAAGATAGACGTATTCCCAGATCACGGGTAGGTGGAGTGTCAGAGGTCTATGAAGATCCTCACAGGCTTTCTCTTAGGCGTCAACACAGACATTCTGCTGATGACAATGAGTCTTTGGTGTTGCCCAATAGAAAGTCGTATAAATTTATGAAACAAAAAAGTGATCGATCATCCATGAAGGGTTGTAGAAGGTTTGTGCTCGTTGCTGTTGGTGGTCTTGGCTCCTGGGATGAACCTTTGGATTCTGGAGAAATATATGATTCTGTTTCAAGGAAATGGACAGAAATTCAGGGGTTCCCTGTGGACTTTGGGATTGCTTGTTCTGGGGTTGTTTGTAATGGGATGTTTTATGTTTATTCTGAAACTGACAAGCTTGCAGGATATGACATAGAAAGGGGTTTCTGGATTGGAATCCAAACCACTCCCTTCCCACCCCGTGTTCATGAATACTACCCAAAACTGGTATCTTGTAATGGCCGGCTCTTCATGCTTTCTGTCTTCTGGTGCGAAGGGGATGGTCAGATAGGCCGGAGAAACAAGGCTGTTAGAAAGGTATGGGAGCTGGATCTCATGCACCTTAACTGGACCGAGGTCTCAGTACATCCTGATGCTCCAATGGACTGGAATGCTGCGTTTGTGGCAGACGGAAACATGATATTTGGTATTGAGATGTTCAAAATATTTGGTCAAGTATTGGATTTTTTTACTGTATGTGATGTGTCTGATACGGGGATGAAATGGAGTCATATCTCAAGGAACCATGTAACTCGCGAGCTGGATGCCTCTTCATGCTTGACCAAGTCAATGGCTGTGCTACATCTAGGCTCCGTGGAGGGATTATCAGAAGAACCCAAACAAGCAGACTATGCGGTCCTGGGTTGGCGAGTGTATGCGATGGTGGCGCCTCAAGCAGACGAAGCAAGCAGAGTGAGGAGAGAGGGGATGCGACTTGATTTTGGGTTCTTCGAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0001558 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0008361 GO:0009987 GO:0016043 GO:0019005 GO:0031461 GO:0031463 GO:0032535 GO:0032991 GO:0040008 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box Kelch_1 Kelch_6

Protein Analysis

631

Amino Acids

71.55

Weight (kDa)

8.45

Isoelectric Point (pI)

48.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006730)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42350 AT5G42360
fragaria_vesca	FvH4_5g25640 FvH4_5g25640 FvH4_5g25640 FvH4_5g25640 FvH4_5g25640
malus_domestica	MD00G1113700.v1.1 MD06G1007100.v1.1
prunus_persica	Prupe.5G009000_v2.0.a1 Prupe.5G009000_v2.0.a1 Prupe.5G009000_v2.0.a1 Prupe.5G009000_v2.0.a1
pyrus_communis	pycom06g00620
rosa_chinensis	RchiOBHm_Chr7g0215931
rosa_laevigata	RLG00000002606
rosa_multiflora	Rmu_sc0006240.1_g000003
rosa_roxburghii	Rroxscaffold_3G00243790
rosa_rugosa	Rorug07G0156900 Rorug07G0157000 Rorug07G0157100
rosa_samantha	Rh7AG295000 Rh7BG287000 Rh7CG315100 Rh7DG297800
rosa_wichuraiana	Rw7G025060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1787
Acc65I	GGTACC	1 cut(s)	293
AccB1I	GGYRCC	2 cut(s)	293, 1819
AccB7I	CCANNNNNTGG	1 cut(s)	290
AccII	CGCG	1 cut(s)	1689
AciI	CCGC	1 cut(s)	1787
AclWI	GGATC	2 cut(s)	968, 1491
AcoI	YGGCCR	1 cut(s)	1393
AcsI	RAATTY	3 cut(s)	341, 1061, 1203
AcuI	CTGAAG	1 cut(s)	867
AcyI	GRCGYC	2 cut(s)	997, 1820
AdeI	CACNNNGTG	1 cut(s)	1355
AfaI	GTAC	3 cut(s)	5, 295, 1518
AfiI	CCNNNNNNNGG	4 cut(s)	290, 863, 942, 1378
AflIII	ACRYGT	1 cut(s)	212
AgsI	TTSAA	5 cut(s)	50, 380, 739, 1188, 1594
AhdI	GACNNNNNGTC	1 cut(s)	1027
AjnI	CCWGG	3 cut(s)	699, 1142, 1791
AloI	GAACNNNNNNTCC	2 cut(s)	1222, 1254
AluBI	AGCT	8 cut(s)	53, 155, 376, 735, 765, 1291, 1480, 1693
AluI	AGCT	8 cut(s)	53, 155, 376, 735, 765, 1291, 1480, 1693
Alw21I	GWGCWC	2 cut(s)	767, 1119
Alw26I	GTCTC	6 cut(s)	7, 470, 529, 633, 874, 1516
AlwI	GGATC	2 cut(s)	968, 1491
AoxI	GGCC	2 cut(s)	1393, 1444
ApeKI	GCWGC	1 cut(s)	1547
ApoI	RAATTY	3 cut(s)	341, 1061, 1203
Asp700I	GAANNNNTTC	1 cut(s)	33
Asp718I	GGTACC	1 cut(s)	293
AspLEI	GCGC	2 cut(s)	822, 1822
AspS9I	GGNCC	2 cut(s)	1503, 1789
AsuHPI	GGTGA	5 cut(s)	35, 343, 457, 617, 799
AvaII	GGWCC	2 cut(s)	1503, 1789
BanI	GGYRCC	2 cut(s)	293, 1819
BanII	GRGCYC	1 cut(s)	767
BauI	CACGAG	1 cut(s)	482
BbsI	GAAGAC	1 cut(s)	1408
Bbv12I	GWGCWC	2 cut(s)	767, 1119
BbvI	GCAGC	1 cut(s)	1534
BccI	CCATC	5 cut(s)	25, 131, 584, 1427, 1807
BcgI	CGANNNNNNTGC	2 cut(s)	1679, 1713
BciT130I	CCWGG	3 cut(s)	701, 1144, 1793
BciVI	GTATCC	2 cut(s)	223, 269
BcoDI	GTCTC	6 cut(s)	7, 470, 529, 633, 874, 1516
BfaI	CTAG	2 cut(s)	693, 1739
BfmI	CTRYAG	2 cut(s)	120, 527
BfoI	RGCGCY	1 cut(s)	1823
BfuI	GTATCC	2 cut(s)	223, 269
BisI	GCNGC	1 cut(s)	1548
BlsI	GCNGC	1 cut(s)	1549
Bme1390I	CCNGG	3 cut(s)	701, 1144, 1793
Bme18I	GGWCC	2 cut(s)	1503, 1789
BmeRI	GACNNNNNGTC	1 cut(s)	1027
BmgT120I	GGNCC	2 cut(s)	1503, 1789
BmiI	GGNNCC	8 cut(s)	295, 452, 524, 1141, 1214, 1676, 1744, 1821
BmrFI	CCNGG	3 cut(s)	701, 1144, 1793
BmsI	GCATC	6 cut(s)	393, 643, 780, 1516, 1687, 1851
BoxI	GACNNNNGTC	1 cut(s)	1508
BpiI	GAAGAC	1 cut(s)	1408
BpmI	CTGGAG	2 cut(s)	327, 1185
BpuEI	CTTGAG	2 cut(s)	1654, 1809
Bsa29I	ATCGAT	1 cut(s)	1084
BsaBI	GATNNNNATC	1 cut(s)	1328
BsaHI	GRCGYC	2 cut(s)	997, 1820
BsaI	GGTCTC	2 cut(s)	7, 1516
BsaJI	CCNNGG	6 cut(s)	297, 560, 1143, 1506, 1746, 1792
BsaXI	ACNNNNNCTCC	2 cut(s)	238, 268
Bsc4I	CCNNNNNNNGG	4 cut(s)	290, 863, 942, 1378
Bse118I	RCCGGY	1 cut(s)	1395
Bse1I	ACTGG	6 cut(s)	435, 462, 897, 1383, 1505, 1544
Bse8I	GATNNNNATC	1 cut(s)	1328
BseBI	CCWGG	3 cut(s)	701, 1144, 1793
BseCI	ATCGAT	1 cut(s)	1084
BseDI	CCNNGG	6 cut(s)	297, 560, 1143, 1506, 1746, 1792
BseJI	GATNNNNATC	1 cut(s)	1328
BseLI	CCNNNNNNNGG	4 cut(s)	290, 863, 942, 1378
BseMII	CTCAG	2 cut(s)	885, 1527
BseNI	ACTGG	6 cut(s)	435, 462, 897, 1383, 1505, 1544
BseRI	GAGGAG	2 cut(s)	259, 1864
BseXI	GCAGC	1 cut(s)	1534
BsgI	GTGCAG	1 cut(s)	459
Bsh1236I	CGCG	1 cut(s)	1689
BshFI	GGCC	2 cut(s)	1395, 1446
BshNI	GGYRCC	2 cut(s)	293, 1819
BshVI	ATCGAT	1 cut(s)	1084
BsiHKAI	GWGCWC	2 cut(s)	767, 1119
BsiSI	CCGG	2 cut(s)	1396, 1447
BslFI	GGGAC	1 cut(s)	786
BslI	CCNNNNNNNGG	4 cut(s)	290, 863, 942, 1378
BsmAI	GTCTC	6 cut(s)	7, 470, 529, 633, 874, 1516
BsmFI	GGGAC	1 cut(s)	786
BsmI	GAATGC	1 cut(s)	1549
BsnI	GGCC	2 cut(s)	1395, 1446
Bso31I	GGTCTC	2 cut(s)	7, 1516
Bsp1286I	GDGCHC	2 cut(s)	767, 1119
Bsp143I	GATC	6 cut(s)	848, 938, 973, 1081, 1085, 1483
Bsp19I	CCATGG	1 cut(s)	560
Bsp68I	TCGCGA	1 cut(s)	1689
BspACI	CCGC	1 cut(s)	1787
BspANI	GGCC	2 cut(s)	1395, 1446
BspCNI	CTCAG	2 cut(s)	884, 1526
BspDI	ATCGAT	1 cut(s)	1084
BspFNI	CGCG	1 cut(s)	1689
BspHI	TCATGA	2 cut(s)	468, 1360
BspLI	GGNNCC	8 cut(s)	295, 452, 524, 1141, 1214, 1676, 1744, 1821
BspMAI	CTGCAG	1 cut(s)	531
BspPI	GGATC	2 cut(s)	968, 1491
BspQI	GCTCTTC	1 cut(s)	1406
BspT107I	GGYRCC	2 cut(s)	293, 1819
BspTNI	GGTCTC	2 cut(s)	7, 1516
BsrFI	RCCGGY	1 cut(s)	1395
BsrI	ACTGG	6 cut(s)	435, 462, 897, 1383, 1505, 1544
BssAI	RCCGGY	1 cut(s)	1395
BssECI	CCNNGG	6 cut(s)	297, 560, 1143, 1506, 1746, 1792
BssMI	GATC	6 cut(s)	848, 938, 973, 1081, 1085, 1483
BssNI	GRCGYC	2 cut(s)	997, 1820
BssSI	CACGAG	1 cut(s)	482
BssT1I	CCWWGG	1 cut(s)	560
Bst2BI	CACGAG	1 cut(s)	482
Bst2UI	CCWGG	3 cut(s)	701, 1144, 1793
Bst4CI	ACNGT	1 cut(s)	1627
Bst6I	CTCTTC	3 cut(s)	39, 1406, 1708
BstACI	GRCGYC	2 cut(s)	997, 1820
BstAPI	GCANNNNNTGC	1 cut(s)	1784
BstC8I	GCNNGC	7 cut(s)	259, 478, 843, 1293, 1397, 1691, 1840
BstDEI	CTNAG	3 cut(s)	871, 992, 1513
BstDSI	CCRYGG	2 cut(s)	560, 1746
BstENI	CCTNNNNNAGG	1 cut(s)	861
BstFNI	CGCG	1 cut(s)	1689
BstH2I	RGCGCY	1 cut(s)	1823
BstHHI	GCGC	2 cut(s)	822, 1822
BstKTI	GATC	6 cut(s)	851, 941, 976, 1084, 1088, 1486
BstMAI	GTCTC	6 cut(s)	7, 470, 529, 633, 874, 1516
BstMBI	GATC	6 cut(s)	848, 938, 973, 1081, 1085, 1483
BstMWI	GCNNNNNNNGC	8 cut(s)	267, 486, 1405, 1556, 1784, 1817, 1826, 1835
BstNI	CCWGG	3 cut(s)	701, 1144, 1793
BstNSI	RCATGY	3 cut(s)	216, 617, 845
BstPAI	GACNNNNGTC	1 cut(s)	1508
BstSCI	CCNGG	3 cut(s)	699, 1142, 1791
BstSFI	CTRYAG	2 cut(s)	120, 527
BstUI	CGCG	1 cut(s)	1689
BstV1I	GCAGC	1 cut(s)	1534
BstV2I	GAAGAC	1 cut(s)	1408
BstX2I	RGATCY	2 cut(s)	973, 1483
BstXI	CCANNNNNNTGG	2 cut(s)	1539, 1723
BstYI	RGATCY	2 cut(s)	973, 1483
Bsu15I	ATCGAT	1 cut(s)	1084
BsuI	GTATCC	2 cut(s)	223, 269
BsuRI	GGCC	2 cut(s)	1395, 1446
BsuTUI	ATCGAT	1 cut(s)	1084
BtgI	CCRYGG	2 cut(s)	560, 1746
BtgZI	GCGATG	2 cut(s)	276, 1826
BtuMI	TCGCGA	1 cut(s)	1689
Cac8I	GCNNGC	7 cut(s)	259, 478, 843, 1293, 1397, 1691, 1840
CciI	TCATGA	2 cut(s)	468, 1360
CfoI	GCGC	2 cut(s)	822, 1822
Cfr10I	RCCGGY	1 cut(s)	1395
Cfr13I	GGNCC	2 cut(s)	1503, 1789
ClaI	ATCGAT	1 cut(s)	1084
CseI	GACGC	1 cut(s)	986
Csp6I	GTAC	3 cut(s)	4, 294, 1517
CviQI	GTAC	3 cut(s)	4, 294, 1517
DdeI	CTNAG	3 cut(s)	871, 992, 1513
DinI	GGCGCC	1 cut(s)	1821
DpnI	GATC	6 cut(s)	850, 940, 975, 1083, 1087, 1485
DpnII	GATC	6 cut(s)	848, 938, 973, 1081, 1085, 1483
DraIII	CACNNNGTG	1 cut(s)	1355
DrdI	GACNNNNNNGTC	1 cut(s)	1787
DriI	GACNNNNNGTC	1 cut(s)	1027
DseDI	GACNNNNNNGTC	1 cut(s)	1787
EaeI	YGGCCR	1 cut(s)	1393
Eam1104I	CTCTTC	3 cut(s)	39, 1406, 1708
Eam1105I	GACNNNNNGTC	1 cut(s)	1027
EarI	CTCTTC	3 cut(s)	39, 1406, 1708
Ecl136II	GAGCTC	1 cut(s)	765
Eco130I	CCWWGG	1 cut(s)	560
Eco24I	GRGCYC	1 cut(s)	767
Eco31I	GGTCTC	2 cut(s)	7, 1516
Eco47I	GGWCC	2 cut(s)	1503, 1789
Eco53kI	GAGCTC	1 cut(s)	765
Eco57I	CTGAAG	1 cut(s)	867
EcoICRI	GAGCTC	1 cut(s)	765
EcoNI	CCTNNNNNAGG	1 cut(s)	861
EcoRII	CCWGG	3 cut(s)	699, 1142, 1791
EcoT14I	CCWWGG	1 cut(s)	560
EcoT22I	ATGCAT	1 cut(s)	619
EcoT38I	GRGCYC	1 cut(s)	767
EgeI	GGCGCC	1 cut(s)	1821
EheI	GGCGCC	1 cut(s)	1821
ErhI	CCWWGG	1 cut(s)	560
FalI	AAGNNNNNCTT	2 cut(s)	18, 50
FaqI	GGGAC	1 cut(s)	786
Fnu4HI	GCNGC	1 cut(s)	1548
FriOI	GRGCYC	1 cut(s)	767
Fsp4HI	GCNGC	1 cut(s)	1548
FspBI	CTAG	2 cut(s)	693, 1739
GlaI	GCGC	2 cut(s)	821, 1821
GluI	GCNGC	1 cut(s)	1548
GsuI	CTGGAG	2 cut(s)	327, 1185
HaeII	RGCGCY	1 cut(s)	1823
HaeIII	GGCC	2 cut(s)	1395, 1446
HapII	CCGG	2 cut(s)	1396, 1447
HgaI	GACGC	1 cut(s)	986
HhaI	GCGC	2 cut(s)	822, 1822
Hin1I	GRCGYC	2 cut(s)	997, 1820
Hin6I	GCGC	2 cut(s)	820, 1820
HinP1I	GCGC	2 cut(s)	820, 1820
HincII	GTYRAC	1 cut(s)	1001
HindII	GTYRAC	1 cut(s)	1001
HindIII	AAGCTT	2 cut(s)	51, 1289
HpaII	CCGG	2 cut(s)	1396, 1447
HphI	GGTGA	5 cut(s)	35, 343, 457, 617, 799
Hpy166II	GTNNAC	2 cut(s)	1001, 1222
Hpy8I	GTNNAC	2 cut(s)	1001, 1222
HpyAV	CCTTC	8 cut(s)	174, 260, 536, 666, 1090, 1101, 1354, 1421
HpyCH4III	ACNGT	1 cut(s)	1627
HpyCH4IV	ACGT	1 cut(s)	928
HpyCH4V	TGCA	9 cut(s)	195, 406, 476, 489, 529, 617, 845, 1295, 1492
HpyF10VI	GCNNNNNNNGC	8 cut(s)	267, 486, 1405, 1556, 1784, 1817, 1826, 1835
HpyF3I	CTNAG	3 cut(s)	871, 992, 1513
HpySE526I	ACGT	1 cut(s)	928
Hsp92I	GRCGYC	2 cut(s)	997, 1820
HspAI	GCGC	2 cut(s)	820, 1820
KasI	GGCGCC	1 cut(s)	1819
KpnI	GGTACC	1 cut(s)	297
KroI	GCCGGC	1 cut(s)	1395
KroNI	GCCGGC	1 cut(s)	1397
Kzo9I	GATC	6 cut(s)	848, 938, 973, 1081, 1085, 1483
LguI	GCTCTTC	1 cut(s)	1406
LmnI	GCTCC	7 cut(s)	456, 762, 835, 1145, 1477, 1534, 1748
Lsp1109I	GCAGC	1 cut(s)	1534
LweI	GCATC	6 cut(s)	393, 643, 780, 1516, 1687, 1851
MaeI	CTAG	2 cut(s)	693, 1739
MaeII	ACGT	1 cut(s)	928
MaeIII	GTNAC	3 cut(s)	236, 877, 1681
MalI	GATC	6 cut(s)	850, 940, 975, 1083, 1087, 1485
MboI	GATC	6 cut(s)	848, 938, 973, 1081, 1085, 1483
MflI	RGATCY	2 cut(s)	973, 1483
MhlI	GDGCHC	2 cut(s)	767, 1119
MluCI	AATT	4 cut(s)	341, 387, 1061, 1203
Mly113I	GGCGCC	1 cut(s)	1820
MlyI	GAGTC	3 cut(s)	876, 1037, 1669
Mph1103I	ATGCAT	1 cut(s)	619
MroNI	GCCGGC	1 cut(s)	1395
MroXI	GAANNNNTTC	1 cut(s)	33
MseI	TTAA	4 cut(s)	585, 771, 806, 1497
MslI	CAYNNNNRTG	2 cut(s)	576, 1524
MspI	CCGG	2 cut(s)	1396, 1447
MspR9I	CCNGG	3 cut(s)	701, 1144, 1793
Mva1269I	GAATGC	1 cut(s)	1549
MvaI	CCWGG	3 cut(s)	701, 1144, 1793
MvnI	CGCG	1 cut(s)	1689
MwoI	GCNNNNNNNGC	8 cut(s)	267, 486, 1405, 1556, 1784, 1817, 1826, 1835
NaeI	GCCGGC	1 cut(s)	1397
NarI	GGCGCC	1 cut(s)	1820
NcoI	CCATGG	1 cut(s)	560
NdeII	GATC	6 cut(s)	848, 938, 973, 1081, 1085, 1483
NgoMIV	GCCGGC	1 cut(s)	1395
NlaIV	GGNNCC	8 cut(s)	295, 452, 524, 1141, 1214, 1676, 1744, 1821
NmuCI	GTSAC	1 cut(s)	877
NruI	TCGCGA	1 cut(s)	1689
NsiI	ATGCAT	1 cut(s)	619
NspI	RCATGY	3 cut(s)	216, 617, 845
PaeI	GCATGC	1 cut(s)	845
PagI	TCATGA	2 cut(s)	468, 1360
PciI	ACATGT	1 cut(s)	212
PciSI	GCTCTTC	1 cut(s)	1406
PctI	GAATGC	1 cut(s)	1549
PdiI	GCCGGC	1 cut(s)	1397
PdmI	GAANNNNTTC	1 cut(s)	33
PfeI	GAWTC	7 cut(s)	29, 109, 302, 383, 1160, 1178, 1329
PflFI	GACNNNGTC	1 cut(s)	1717
PflMI	CCANNNNNTGG	1 cut(s)	290
PfoI	TCCNGGA	1 cut(s)	699
PkrI	GCNGC	1 cut(s)	1549
PleI	GAGTC	3 cut(s)	875, 1036, 1668
PluTI	GGCGCC	1 cut(s)	1823
PpsI	GAGTC	3 cut(s)	875, 1036, 1668
PscI	ACATGT	1 cut(s)	212
PshAI	GACNNNNGTC	1 cut(s)	1508
Psp124BI	GAGCTC	1 cut(s)	767
Psp6I	CCWGG	3 cut(s)	699, 1142, 1791
PspGI	CCWGG	3 cut(s)	699, 1142, 1791
PspN4I	GGNNCC	8 cut(s)	295, 452, 524, 1141, 1214, 1676, 1744, 1821
PspPI	GGNCC	2 cut(s)	1503, 1789
PstI	CTGCAG	1 cut(s)	531
PsuI	RGATCY	2 cut(s)	973, 1483
PsyI	GACNNNGTC	1 cut(s)	1717
RruI	TCGCGA	1 cut(s)	1689
RsaI	GTAC	3 cut(s)	5, 295, 1518
RsaNI	GTAC	3 cut(s)	4, 294, 1517
RseI	CAYNNNNRTG	2 cut(s)	576, 1524
SacI	GAGCTC	1 cut(s)	767
SapI	GCTCTTC	1 cut(s)	1406
SaqAI	TTAA	4 cut(s)	585, 771, 806, 1497
SatI	GCNGC	1 cut(s)	1548
Sau3AI	GATC	6 cut(s)	848, 938, 973, 1081, 1085, 1483
Sau96I	GGNCC	2 cut(s)	1503, 1789
SchI	GAGTC	3 cut(s)	876, 1037, 1669
ScrFI	CCNGG	3 cut(s)	701, 1144, 1793
SduI	GDGCHC	2 cut(s)	767, 1119
SfaNI	GCATC	6 cut(s)	393, 643, 780, 1516, 1687, 1851
SfcI	CTRYAG	2 cut(s)	120, 527
SfoI	GGCGCC	1 cut(s)	1821
SinI	GGWCC	2 cut(s)	1503, 1789
SmiMI	CAYNNNNRTG	2 cut(s)	576, 1524
SmlI	CTYRAG	2 cut(s)	1669, 1824
SmoI	CTYRAG	2 cut(s)	1669, 1824
SphI	GCATGC	1 cut(s)	845
Sse9I	AATT	4 cut(s)	341, 387, 1061, 1203
SsiI	CCGC	1 cut(s)	1787
SspDI	GGCGCC	1 cut(s)	1819
SspI	AATATT	1 cut(s)	1599
SspMI	CTAG	2 cut(s)	693, 1739
SstI	GAGCTC	1 cut(s)	767
StyD4I	CCNGG	3 cut(s)	699, 1142, 1791
StyI	CCWWGG	1 cut(s)	560
TaaI	ACNGT	1 cut(s)	1627
TaiI	ACGT	1 cut(s)	931
TaqI	TCGA	4 cut(s)	65, 731, 1084, 1884
TaqII	GACCGA	1 cut(s)	1520
TasI	AATT	4 cut(s)	341, 387, 1061, 1203
TatI	WGTACW	2 cut(s)	3, 1516
TfiI	GAWTC	7 cut(s)	29, 109, 302, 383, 1160, 1178, 1329
Tru1I	TTAA	4 cut(s)	585, 771, 806, 1497
Tru9I	TTAA	4 cut(s)	585, 771, 806, 1497
TseFI	GTSAC	1 cut(s)	877
TseI	GCWGC	1 cut(s)	1547
Tsp45I	GTSAC	1 cut(s)	877
TspGWI	ACGGA	2 cut(s)	1578, 1735
Tth111I	GACNNNGTC	1 cut(s)	1717
Van91I	CCANNNNNTGG	1 cut(s)	290
VpaK11BI	GGWCC	2 cut(s)	1503, 1789
XagI	CCTNNNNNAGG	1 cut(s)	861
XapI	RAATTY	3 cut(s)	341, 1061, 1203
XceI	RCATGY	3 cut(s)	216, 617, 845
XmnI	GAANNNNTTC	1 cut(s)	33
XspI	CTAG	2 cut(s)	693, 1739
Zsp2I	ATGCAT	1 cut(s)	619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.