Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0006730

Physical Location & Seq

Genomic Coordinates Forward (+)

36889681 .. 36892255

Gene Structure 2575 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002606

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGCCCCTAATGCTCATGGTTCATGACATTTGCAAGACTCTGCGTCTGATGAGAACTGTTAGCCAGAAGTTGAGGAAGAAGGGTCAGAAATCTGGAGGAGAAGAGGAGGATGATTTGAAGGGGATATCGTTGAGATGTCTTACCTTGTATGGTAGGGGTGGGGGTTGCAAAGTAGGTGCTGACACAGGTGATGAGTTTGGGGATCCAAGTACCAGGAGGAGGTCAAGTGCCAGTGATGAAGGAAAGGGATACCGACCTATATGTGGCACTGAGGAATCTGGAGTGGATTGCTTCTCGTATGGGATGAGGGAGCGATTTTGGAAGAAACATAACAGAAAGGAATTTGAGCTTGAAGAATCAGTAAGACATAGCAGAATGCACATATTTCTTCCAGATGATATCCTTGAACTGTGCTTGGTGAGGCTCCCACTAACTAGTCTCATGACCGCACGCCTTGTGTGTAAGAAATGGAAACGGTTGACCACTACTCCTCGATTCCTTCATATGAGACGGGAAGGTTCACATCTGAATCCGTGGTTGTTTTTGTTTGGTGCTGTTAAAGATGGTTATTGCTCTGGTGTGATACATGCATTGGATGTGTCTCAAAACCAATGGCATGGGATAGATGCTGATATTCTAAAGGGAAGATTCATGTTTTCTGTTGCTAGCATCCAGGATGATATTTATATTGTTGGAGGCTGTTCTAGCTTGAACAACTCTGGGAGACTGGATAGGAGCTCATTTAAGACGCACAAAGGGGTGATGATGTTTAGTCCCTTAACTAAGTCTTGGCGTAAAGTTGCATCTATGAAGCATGCAAGATCAATGCCTATTTTAGGAGTTTCTGAGGTCAGTTTTGATTTTTCAATCATTCAAAGCCATCACAATCGACAAGATAGACGTATCCCCAGGTCCCGGGTTGGTGGGGTGTCAGATGTTTATGAAGATCCTCACAGGCTGTCCCTGAGGCGTCAAAATAGATATGCAGTTGATGGAAATGAATCTTCAATCTTGACCAGTAGAAAGTCATACAAGTTTATCAAACATAAAAATGATCCCTCAGGCATGAAGGGTTATAGAAGATTTGTGCTTATTGCTGTAGGTGGTCTTGGACCATGGGATGAGCCTTTGGATTCTGGAGAAATATATGATTCTATATCAAATAAATGGACAGAAATTCAAAGGCTGCCTTTGGACTTTGGGGTCATTTCTTCTGGGGTAGTTTGTAATGGGATGTTTTATGTCTATTCTGAAACTGACAAGCTCGCAGGATATGACATAGAACGGGATTTCTGGGTTGGGATCCAAACCACTCCCTTCCCACCCCGTGTTCATGAATATTACCCAAAACTGGTATCTTGTAATGGCCGGCTTTTCATGCTCTCTGTCTTGTGGTGTGAAGGGGATGGTCAAATAGGCCGGAGAAACAAGGCTGTTAGAAAATTATGGGAGCTAGATCTCATGTATCTCAACTGGTACGAGGTCTCTGTGCATCCTGATGCTCCAATGGACTGGAATGCTGGGTTTGTTGCAAATGGAAATCTGATATTTGGCATTGAGATGTTCAAAATATTTGGTCAAGTATTGGATTTTTTCACTGTATGCGATGTGTCTGACATGGAGATGAAATGGAGTCATATCTCAAGGAACCATGTTACTCGTGAACTGGATGCTTCTTCGTGCATGACAAAATCGATGGCTGTGCTACATCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0001558 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0008361 GO:0009987 GO:0016043 GO:0019005 GO:0031461 GO:0031463 GO:0032535 GO:0032991 GO:0040008 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box Kelch_1 Kelch_6

Protein Analysis

572

Amino Acids

65.28

Weight (kDa)

9.02

Isoelectric Point (pI)

44.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	130 - 167	7.6e-09	F-box domain
F-box-like	PF12937	130 - 166	7.1e-06	F-box-like
Kelch_KLHDC2_KLHL20_DRC7	PF24681	147 - 233	6.5e-06	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_1	PF01344	216 - 271	8.2e-07	Kelch motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006730)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42350 AT5G42360
fragaria_vesca	FvH4_5g25640 FvH4_5g25640 FvH4_5g25640 FvH4_5g25640 FvH4_5g25640
malus_domestica	MD00G1113700.v1.1 MD06G1007100.v1.1
prunus_persica	Prupe.5G009000_v2.0.a1 Prupe.5G009000_v2.0.a1 Prupe.5G009000_v2.0.a1 Prupe.5G009000_v2.0.a1
pyrus_communis	pycom06g00620
rosa_chinensis	RchiOBHm_Chr7g0215931
rosa_laevigata	RLG00000002606
rosa_multiflora	Rmu_sc0006240.1_g000003
rosa_roxburghii	Rroxscaffold_3G00243790
rosa_rugosa	Rorug07G0156900 Rorug07G0157000 Rorug07G0157100
rosa_samantha	Rh7AG295000 Rh7BG287000 Rh7CG315100 Rh7DG297800
rosa_wichuraiana	Rw7G025060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1202
AciI	CCGC	1 cut(s)	447
AclWI	GGATC	6 cut(s)	197, 210, 941, 1049, 1297, 1310
AcoI	YGGCCR	1 cut(s)	1366
AcsI	RAATTY	2 cut(s)	341, 1176
AcyI	GRCGYC	1 cut(s)	970
AdeI	CACNNNGTG	1 cut(s)	1328
AfaI	GTAC	2 cut(s)	211, 1478
AfiI	CCNNNNNNNGG	5 cut(s)	219, 263, 836, 915, 1351
AgsI	TTSAA	9 cut(s)	118, 353, 407, 712, 867, 875, 1008, 1181, 1567
AhdI	GACNNNNNGTC	1 cut(s)	42
AhlI	ACTAGT	1 cut(s)	434
AjnI	CCWGG	3 cut(s)	212, 672, 908
AluBI	AGCT	5 cut(s)	349, 708, 738, 1264, 1453
AluI	AGCT	5 cut(s)	349, 708, 738, 1264, 1453
Alw21I	GWGCWC	1 cut(s)	740
Alw26I	GTCTC	5 cut(s)	443, 502, 606, 718, 1489
AlwI	GGATC	6 cut(s)	197, 210, 941, 1049, 1297, 1310
Ama87I	CYCGRG	1 cut(s)	915
AoxI	GGCC	2 cut(s)	1366, 1417
ApeKI	GCWGC	1 cut(s)	1186
ApoI	RAATTY	2 cut(s)	341, 1176
AspS9I	GGNCC	2 cut(s)	912, 1112
AsuC2I	CCSGG	2 cut(s)	916, 917
AsuHPI	GGTGA	3 cut(s)	200, 430, 772
AsuNHI	GCTAGC	1 cut(s)	665
AvaI	CYCGRG	1 cut(s)	915
AvaII	GGWCC	2 cut(s)	912, 1112
AxyI	CCTNAGG	2 cut(s)	965, 1060
BamHI	GGATCC	2 cut(s)	202, 1302
BanII	GRGCYC	1 cut(s)	740
BauI	CACGAG	1 cut(s)	1659
Bbv12I	GWGCWC	1 cut(s)	740
BbvI	GCAGC	1 cut(s)	1173
BccI	CCATC	5 cut(s)	557, 888, 986, 1400, 1690
BcgI	CGANNNNNNTGC	1 cut(s)	1684
BciT130I	CCWGG	3 cut(s)	214, 674, 910
BciVI	GTATCC	2 cut(s)	242, 914
BcnI	CCSGG	2 cut(s)	916, 917
BcoDI	GTCTC	5 cut(s)	443, 502, 606, 718, 1489
BcuI	ACTAGT	1 cut(s)	434
BfaI	CTAG	4 cut(s)	435, 666, 705, 1454
BfmI	CTRYAG	1 cut(s)	1098
BfuI	GTATCC	2 cut(s)	242, 914
BglII	AGATCT	1 cut(s)	1456
BisI	GCNGC	1 cut(s)	1187
BlsI	GCNGC	1 cut(s)	1188
Bme1390I	CCNGG	5 cut(s)	214, 674, 910, 916, 917
Bme18I	GGWCC	2 cut(s)	912, 1112
BmeRI	GACNNNNNGTC	1 cut(s)	42
BmeT110I	CYCGRG	1 cut(s)	915
BmgT120I	GGNCC	2 cut(s)	912, 1112
BmiI	GGNNCC	5 cut(s)	204, 425, 914, 1304, 1649
BmrFI	CCNGG	5 cut(s)	214, 674, 910, 916, 917
BmsI	GCATC	6 cut(s)	616, 678, 812, 1489, 1501, 1660
BmtI	GCTAGC	1 cut(s)	669
BpmI	CTGGAG	3 cut(s)	114, 300, 1158
BpuEI	CTTGAG	1 cut(s)	1627
BpuMI	CCSGG	2 cut(s)	916, 917
Bsa29I	ATCGAT	1 cut(s)	1694
BsaHI	GRCGYC	1 cut(s)	970
BsaI	GGTCTC	1 cut(s)	1489
BsaJI	CCNNGG	4 cut(s)	533, 908, 915, 1115
BsaXI	ACNNNNNCTCC	4 cut(s)	211, 241, 472, 502
Bsc4I	CCNNNNNNNGG	5 cut(s)	219, 263, 836, 915, 1351
Bse118I	RCCGGY	1 cut(s)	1368
Bse1I	ACTGG	7 cut(s)	231, 732, 1017, 1356, 1478, 1517, 1671
Bse21I	CCTNAGG	2 cut(s)	965, 1060
BseBI	CCWGG	3 cut(s)	214, 674, 910
BseCI	ATCGAT	1 cut(s)	1694
BseDI	CCNNGG	4 cut(s)	533, 908, 915, 1115
BseLI	CCNNNNNNNGG	5 cut(s)	219, 263, 836, 915, 1351
BseMII	CTCAG	4 cut(s)	261, 837, 956, 1074
BseNI	ACTGG	7 cut(s)	231, 732, 1017, 1356, 1478, 1517, 1671
BseRI	GAGGAG	4 cut(s)	111, 119, 232, 480
BseXI	GCAGC	1 cut(s)	1173
BseYI	CCCAGC	1 cut(s)	1520
BshFI	GGCC	2 cut(s)	1368, 1419
BshVI	ATCGAT	1 cut(s)	1694
BsiHKAI	GWGCWC	1 cut(s)	740
BsiHKCI	CYCGRG	1 cut(s)	915
BsiSI	CCGG	3 cut(s)	916, 1369, 1420
BslFI	GGGAC	3 cut(s)	759, 898, 946
BslI	CCNNNNNNNGG	5 cut(s)	219, 263, 836, 915, 1351
BsmAI	GTCTC	5 cut(s)	443, 502, 606, 718, 1489
BsmBI	CGTCTC	1 cut(s)	502
BsmFI	GGGAC	3 cut(s)	759, 898, 946
BsmI	GAATGC	2 cut(s)	381, 1522
BsnI	GGCC	2 cut(s)	1368, 1419
Bso31I	GGTCTC	1 cut(s)	1489
BsoBI	CYCGRG	1 cut(s)	915
Bsp1286I	GDGCHC	1 cut(s)	740
Bsp143I	GATC	6 cut(s)	202, 821, 946, 1054, 1302, 1456
Bsp19I	CCATGG	1 cut(s)	1115
BspACI	CCGC	1 cut(s)	447
BspANI	GGCC	2 cut(s)	1368, 1419
BspCNI	CTCAG	4 cut(s)	262, 838, 957, 1073
BspDI	ATCGAT	1 cut(s)	1694
BspHI	TCATGA	3 cut(s)	22, 441, 1333
BspLI	GGNNCC	5 cut(s)	204, 425, 914, 1304, 1649
BspOI	GCTAGC	1 cut(s)	669
BspPI	GGATC	6 cut(s)	197, 210, 941, 1049, 1297, 1310
BspTNI	GGTCTC	1 cut(s)	1489
BsrFI	RCCGGY	1 cut(s)	1368
BsrI	ACTGG	7 cut(s)	231, 732, 1017, 1356, 1478, 1517, 1671
BssAI	RCCGGY	1 cut(s)	1368
BssECI	CCNNGG	4 cut(s)	533, 908, 915, 1115
BssMI	GATC	6 cut(s)	202, 821, 946, 1054, 1302, 1456
BssNI	GRCGYC	1 cut(s)	970
BssSI	CACGAG	1 cut(s)	1659
BssT1I	CCWWGG	1 cut(s)	1115
Bst2BI	CACGAG	1 cut(s)	1659
Bst2UI	CCWGG	3 cut(s)	214, 674, 910
Bst4CI	ACNGT	4 cut(s)	58, 411, 477, 1600
Bst6I	CTCTTC	1 cut(s)	96
BstACI	GRCGYC	1 cut(s)	970
BstC8I	GCNNGC	5 cut(s)	451, 667, 816, 1266, 1370
BstDEI	CTNAG	5 cut(s)	270, 783, 846, 965, 1060
BstDSI	CCRYGG	2 cut(s)	533, 1115
BstENI	CCTNNNNNAGG	1 cut(s)	834
BstKTI	GATC	6 cut(s)	205, 824, 949, 1057, 1305, 1459
BstMAI	GTCTC	5 cut(s)	443, 502, 606, 718, 1489
BstMBI	GATC	6 cut(s)	202, 821, 946, 1054, 1302, 1456
BstMWI	GCNNNNNNNGC	3 cut(s)	10, 705, 1378
BstNI	CCWGG	3 cut(s)	214, 674, 910
BstNSI	RCATGY	2 cut(s)	590, 818
BstSCI	CCNGG	5 cut(s)	212, 672, 908, 914, 915
BstSFI	CTRYAG	1 cut(s)	1098
BstV1I	GCAGC	1 cut(s)	1173
BstX2I	RGATCY	4 cut(s)	202, 946, 1302, 1456
BstXI	CCANNNNNNTGG	2 cut(s)	617, 1512
BstYI	RGATCY	4 cut(s)	202, 946, 1302, 1456
Bsu15I	ATCGAT	1 cut(s)	1694
Bsu36I	CCTNAGG	2 cut(s)	965, 1060
BsuI	GTATCC	2 cut(s)	242, 914
BsuRI	GGCC	2 cut(s)	1368, 1419
BsuTUI	ATCGAT	1 cut(s)	1694
BtgI	CCRYGG	2 cut(s)	533, 1115
BtgZI	GCGATG	1 cut(s)	1620
BtsIMutI	CAGTG	3 cut(s)	238, 267, 1596
Cac8I	GCNNGC	5 cut(s)	451, 667, 816, 1266, 1370
CciI	TCATGA	3 cut(s)	22, 441, 1333
Cfr10I	RCCGGY	1 cut(s)	1368
Cfr13I	GGNCC	2 cut(s)	912, 1112
Cfr9I	CCCGGG	1 cut(s)	915
ClaI	ATCGAT	1 cut(s)	1694
CseI	GACGC	3 cut(s)	32, 757, 959
Csp6I	GTAC	2 cut(s)	210, 1477
CviQI	GTAC	2 cut(s)	210, 1477
DdeI	CTNAG	5 cut(s)	270, 783, 846, 965, 1060
DpnI	GATC	6 cut(s)	204, 823, 948, 1056, 1304, 1458
DpnII	GATC	6 cut(s)	202, 821, 946, 1054, 1302, 1456
DraIII	CACNNNGTG	1 cut(s)	1328
DrdI	GACNNNNNNGTC	1 cut(s)	1202
DriI	GACNNNNNGTC	1 cut(s)	42
DseDI	GACNNNNNNGTC	1 cut(s)	1202
EaeI	YGGCCR	1 cut(s)	1366
Eam1104I	CTCTTC	1 cut(s)	96
Eam1105I	GACNNNNNGTC	1 cut(s)	42
EarI	CTCTTC	1 cut(s)	96
Ecl136II	GAGCTC	1 cut(s)	738
Eco130I	CCWWGG	1 cut(s)	1115
Eco24I	GRGCYC	1 cut(s)	740
Eco31I	GGTCTC	1 cut(s)	1489
Eco32I	GATATC	2 cut(s)	126, 400
Eco47I	GGWCC	2 cut(s)	912, 1112
Eco53kI	GAGCTC	1 cut(s)	738
Eco81I	CCTNAGG	2 cut(s)	965, 1060
Eco88I	CYCGRG	1 cut(s)	915
EcoICRI	GAGCTC	1 cut(s)	738
EcoNI	CCTNNNNNAGG	1 cut(s)	834
EcoO109I	RGGNCCY	1 cut(s)	912
EcoRII	CCWGG	3 cut(s)	212, 672, 908
EcoRV	GATATC	2 cut(s)	126, 400
EcoT14I	CCWWGG	1 cut(s)	1115
EcoT22I	ATGCAT	1 cut(s)	592
EcoT38I	GRGCYC	1 cut(s)	740
ErhI	CCWWGG	1 cut(s)	1115
Esp3I	CGTCTC	1 cut(s)	502
FalI	AAGNNNNNCTT	2 cut(s)	1174, 1206
FaqI	GGGAC	3 cut(s)	759, 898, 946
FauNDI	CATATG	1 cut(s)	504
Fnu4HI	GCNGC	1 cut(s)	1187
FriOI	GRGCYC	1 cut(s)	740
Fsp4HI	GCNGC	1 cut(s)	1187
FspBI	CTAG	4 cut(s)	435, 666, 705, 1454
GluI	GCNGC	1 cut(s)	1187
GsaI	CCCAGC	1 cut(s)	1524
GsuI	CTGGAG	3 cut(s)	114, 300, 1158
HaeIII	GGCC	2 cut(s)	1368, 1419
HapII	CCGG	3 cut(s)	916, 1369, 1420
HgaI	GACGC	3 cut(s)	32, 757, 959
Hin1I	GRCGYC	1 cut(s)	970
HincII	GTYRAC	1 cut(s)	480
HindII	GTYRAC	1 cut(s)	480
HpaII	CCGG	3 cut(s)	916, 1369, 1420
HphI	GGTGA	3 cut(s)	200, 430, 772
Hpy166II	GTNNAC	3 cut(s)	480, 521, 1664
Hpy188I	TCNGA	8 cut(s)	48, 87, 528, 847, 934, 1252, 1545, 1615
Hpy8I	GTNNAC	3 cut(s)	480, 521, 1664
HpyAV	CCTTC	8 cut(s)	73, 112, 233, 509, 509, 1063, 1327, 1394
HpyCH4III	ACNGT	4 cut(s)	58, 411, 477, 1600
HpyCH4IV	ACGT	1 cut(s)	901
HpyF10VI	GCNNNNNNNGC	3 cut(s)	10, 705, 1378
HpyF3I	CTNAG	5 cut(s)	270, 783, 846, 965, 1060
HpySE526I	ACGT	1 cut(s)	901
Hsp92I	GRCGYC	1 cut(s)	970
KroI	GCCGGC	1 cut(s)	1368
KroNI	GCCGGC	1 cut(s)	1370
Kzo9I	GATC	6 cut(s)	202, 821, 946, 1054, 1302, 1456
LmnI	GCTCC	5 cut(s)	310, 429, 735, 1450, 1507
Lsp1109I	GCAGC	1 cut(s)	1173
LweI	GCATC	6 cut(s)	616, 678, 812, 1489, 1501, 1660
MaeI	CTAG	4 cut(s)	435, 666, 705, 1454
MaeII	ACGT	1 cut(s)	901
MaeIII	GTNAC	1 cut(s)	1654
MalI	GATC	6 cut(s)	204, 823, 948, 1056, 1304, 1458
MboI	GATC	6 cut(s)	202, 821, 946, 1054, 1302, 1456
MflI	RGATCY	4 cut(s)	202, 946, 1302, 1456
MhlI	GDGCHC	1 cut(s)	740
MluCI	AATT	3 cut(s)	341, 1176, 1442
MlyI	GAGTC	2 cut(s)	31, 1642
MmeI	TCCRAC	1 cut(s)	673
Mph1103I	ATGCAT	1 cut(s)	592
MroNI	GCCGGC	1 cut(s)	1368
MseI	TTAA	3 cut(s)	558, 744, 779
MslI	CAYNNNNRTG	4 cut(s)	1050, 1497, 1559, 1622
MspI	CCGG	3 cut(s)	916, 1369, 1420
MspR9I	CCNGG	5 cut(s)	214, 674, 910, 916, 917
Mva1269I	GAATGC	2 cut(s)	381, 1522
MvaI	CCWGG	3 cut(s)	214, 674, 910
MwoI	GCNNNNNNNGC	3 cut(s)	10, 705, 1378
NaeI	GCCGGC	1 cut(s)	1370
NciI	CCSGG	2 cut(s)	916, 917
NcoI	CCATGG	1 cut(s)	1115
NdeI	CATATG	1 cut(s)	504
NdeII	GATC	6 cut(s)	202, 821, 946, 1054, 1302, 1456
NgoMIV	GCCGGC	1 cut(s)	1368
NheI	GCTAGC	1 cut(s)	665
NlaIV	GGNNCC	5 cut(s)	204, 425, 914, 1304, 1649
NsiI	ATGCAT	1 cut(s)	592
NspI	RCATGY	2 cut(s)	590, 818
PaeI	GCATGC	1 cut(s)	818
PagI	TCATGA	3 cut(s)	22, 441, 1333
PctI	GAATGC	2 cut(s)	381, 1522
PdiI	GCCGGC	1 cut(s)	1370
PfeI	GAWTC	8 cut(s)	275, 356, 495, 529, 648, 1001, 1133, 1151
PfoI	TCCNGGA	1 cut(s)	672
PkrI	GCNGC	1 cut(s)	1188
PleI	GAGTC	2 cut(s)	31, 1641
PpsI	GAGTC	2 cut(s)	31, 1641
PpuMI	RGGWCCY	1 cut(s)	912
Psp124BI	GAGCTC	1 cut(s)	740
Psp5II	RGGWCCY	1 cut(s)	912
Psp6I	CCWGG	3 cut(s)	212, 672, 908
PspFI	CCCAGC	1 cut(s)	1520
PspGI	CCWGG	3 cut(s)	212, 672, 908
PspN4I	GGNNCC	5 cut(s)	204, 425, 914, 1304, 1649
PspPI	GGNCC	2 cut(s)	912, 1112
PspPPI	RGGWCCY	1 cut(s)	912
PsuI	RGATCY	4 cut(s)	202, 946, 1302, 1456
RsaI	GTAC	2 cut(s)	211, 1478
RsaNI	GTAC	2 cut(s)	210, 1477
RseI	CAYNNNNRTG	4 cut(s)	1050, 1497, 1559, 1622
SacI	GAGCTC	1 cut(s)	740
SaqAI	TTAA	3 cut(s)	558, 744, 779
SatI	GCNGC	1 cut(s)	1187
Sau3AI	GATC	6 cut(s)	202, 821, 946, 1054, 1302, 1456
Sau96I	GGNCC	2 cut(s)	912, 1112
SchI	GAGTC	2 cut(s)	31, 1642
ScrFI	CCNGG	5 cut(s)	214, 674, 910, 916, 917
SduI	GDGCHC	1 cut(s)	740
SfaNI	GCATC	6 cut(s)	616, 678, 812, 1489, 1501, 1660
SfcI	CTRYAG	1 cut(s)	1098
SinI	GGWCC	2 cut(s)	912, 1112
SmaI	CCCGGG	1 cut(s)	917
SmiMI	CAYNNNNRTG	4 cut(s)	1050, 1497, 1559, 1622
SmlI	CTYRAG	1 cut(s)	1642
SmoI	CTYRAG	1 cut(s)	1642
SpeI	ACTAGT	1 cut(s)	434
SphI	GCATGC	1 cut(s)	818
Sse9I	AATT	3 cut(s)	341, 1176, 1442
SsiI	CCGC	1 cut(s)	447
SspI	AATATT	2 cut(s)	1340, 1572
SspMI	CTAG	4 cut(s)	435, 666, 705, 1454
SstI	GAGCTC	1 cut(s)	740
StyD4I	CCNGG	5 cut(s)	212, 672, 908, 914, 915
StyI	CCWWGG	1 cut(s)	1115
TaaI	ACNGT	4 cut(s)	58, 411, 477, 1600
TaiI	ACGT	1 cut(s)	904
TaqI	TCGA	3 cut(s)	493, 889, 1694
TasI	AATT	3 cut(s)	341, 1176, 1442
TfiI	GAWTC	8 cut(s)	275, 356, 495, 529, 648, 1001, 1133, 1151
Tru1I	TTAA	3 cut(s)	558, 744, 779
Tru9I	TTAA	3 cut(s)	558, 744, 779
TscAI	CASTG	3 cut(s)	238, 274, 1603
TseI	GCWGC	1 cut(s)	1186
TspGWI	ACGGA	1 cut(s)	522
TspMI	CCCGGG	1 cut(s)	915
TspRI	CASTG	3 cut(s)	238, 274, 1603
VpaK11BI	GGWCC	2 cut(s)	912, 1112
XagI	CCTNNNNNAGG	1 cut(s)	834
XapI	RAATTY	2 cut(s)	341, 1176
XceI	RCATGY	2 cut(s)	590, 818
XmaI	CCCGGG	1 cut(s)	915
XspI	CTAG	4 cut(s)	435, 666, 705, 1454
Zsp2I	ATGCAT	1 cut(s)	592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.