pycom06g03370

Glucosamine 6-phosphate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
4258990 .. 4259451
462 bp
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UTR
Exon/CDS
Intron
pycom06g03370.1

Sequence Viewer

Length: 462 bp
ATGGAGAGGAGTGAAGGGCAAAATTTTCGCGTCCGAAAATTAGAGATGTCAGATAAAAGCAAGGGTTTCATACAACTGTTGCAACAGCTAACTGTTTGTGATTCTGTATCTGACAAGGAGTTTGCAGATAGGTTCGGAGAGATTAGCTCCCTCGGAGATGACCATGTTATCTGTGTTGTAGAAGATGATCGCTCGGGGAAGATTATTGCAACTGGAAGCGTGTTCATCGAGAAGAAGTTCATCAGGAACTGTGGCAAAGTCGGGCACATTGAAGACATTGTGGTTGACGCTGATGCTCGTGGGATGCGGTTAGGGAAGAAAATCATTAGCTTCCTTACGGATCATGCTCGTTCTGTTGGGTGTTATAAGGTGATTCTTGATTGCAGTAACGAGAACAGAGCATTCTATGAGAAGTGCGGCTTCAAGCAGAAAGAAATTCAGATGGTCAAGTATTTCACTTGA

Protein Analysis

154

Amino Acids

17.39

Weight (kDa)

7.58

Isoelectric Point (pI)

32.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 39 - 141 7.9e-18 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 54 - 143 2e-13 Acetyltransferase (GNAT) domain
Acetyltransf_10 PF13673 79 - 145 5.7e-08 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 366
AccII CGCG 1 cut(s) 30
AciI CCGC 2 cut(s) 307, 417
AclWI GGATC 1 cut(s) 348
AcsI RAATTY 2 cut(s) 22, 435
AgsI TTSAA 2 cut(s) 272, 424
AluBI AGCT 3 cut(s) 88, 147, 330
AluI AGCT 3 cut(s) 88, 147, 330
AlwI GGATC 1 cut(s) 348
AlwNI CAGNNNCTG 1 cut(s) 249
Ama87I CYCGRG 1 cut(s) 193
ApoI RAATTY 2 cut(s) 22, 435
ArsI GACNNNNNNTTYG 2 cut(s) 104, 136
Asp700I GAANNNNTTC 1 cut(s) 236
AsuHPI GGTGA 1 cut(s) 382
AvaI CYCGRG 1 cut(s) 193
BaeGI GKGCMC 1 cut(s) 267
BauI CACGAG 1 cut(s) 297
BbsI GAAGAC 1 cut(s) 279
BccI CCATC 1 cut(s) 436
BcgI CGANNNNNNTGC 2 cut(s) 8, 42
BisI GCNGC 1 cut(s) 418
BlsI GCNGC 1 cut(s) 419
BmeT110I CYCGRG 1 cut(s) 193
BmsI GCATC 2 cut(s) 283, 294
BpiI GAAGAC 1 cut(s) 279
BplI GAGNNNNNCTC 2 cut(s) 131, 163
BsaJI CCNNGG 1 cut(s) 151
Bse1I ACTGG 1 cut(s) 217
BseDI CCNNGG 1 cut(s) 151
BseGI GGATG 1 cut(s) 309
BseNI ACTGG 1 cut(s) 217
BseRI GAGGAG 1 cut(s) 22
BseSI GKGCMC 1 cut(s) 267
Bsh1236I CGCG 1 cut(s) 30
BsiHKCI CYCGRG 1 cut(s) 193
BsmI GAATGC 1 cut(s) 401
BsoBI CYCGRG 1 cut(s) 193
Bsp1286I GDGCHC 1 cut(s) 267
Bsp143I GATC 2 cut(s) 187, 340
BspACI CCGC 2 cut(s) 307, 417
BspFNI CGCG 1 cut(s) 30
BspPI GGATC 1 cut(s) 348
BsrI ACTGG 1 cut(s) 217
BssECI CCNNGG 1 cut(s) 151
BssMI GATC 2 cut(s) 187, 340
BssSI CACGAG 1 cut(s) 297
Bst2BI CACGAG 1 cut(s) 297
Bst4CI ACNGT 3 cut(s) 78, 94, 251
BstF5I GGATG 1 cut(s) 309
BstFNI CGCG 1 cut(s) 30
BstKTI GATC 2 cut(s) 190, 343
BstMBI GATC 2 cut(s) 187, 340
BstSLI GKGCMC 1 cut(s) 267
BstUI CGCG 1 cut(s) 30
BstV2I GAAGAC 1 cut(s) 279
BtsCI GGATG 1 cut(s) 309
CaiI CAGNNNCTG 1 cut(s) 249
CseI GACGC 2 cut(s) 19, 296
CviAII CATG 2 cut(s) 164, 344
CviJI RGCY 4 cut(s) 88, 147, 330, 420
CviKI_1 RGCY 4 cut(s) 88, 147, 330, 420
DpnI GATC 2 cut(s) 189, 342
DpnII GATC 2 cut(s) 187, 340
Eco88I CYCGRG 1 cut(s) 193
FaeI CATG 2 cut(s) 167, 347
FaiI YATR 5 cut(s) 71, 165, 345, 366, 408
FalI AAGNNNNNCTT 2 cut(s) 404, 436
FatI CATG 2 cut(s) 163, 343
Fnu4HI GCNGC 1 cut(s) 418
FokI GGATG 1 cut(s) 316
Fsp4HI GCNGC 1 cut(s) 418
GluI GCNGC 1 cut(s) 418
HgaI GACGC 2 cut(s) 19, 296
Hin1II CATG 2 cut(s) 167, 347
HincII GTYRAC 1 cut(s) 286
HindII GTYRAC 1 cut(s) 286
HinfI GANTC 2 cut(s) 101, 373
HphI GGTGA 1 cut(s) 382
Hpy166II GTNNAC 1 cut(s) 286
Hpy188I TCNGA 6 cut(s) 35, 52, 112, 137, 155, 441
Hpy188III TCNNGA 3 cut(s) 229, 244, 377
Hpy8I GTNNAC 1 cut(s) 286
HpyAV CCTTC 1 cut(s) 8
HpyCH4III ACNGT 3 cut(s) 78, 94, 251
HpyCH4V TGCA 4 cut(s) 82, 125, 209, 384
Hsp92II CATG 2 cut(s) 167, 347
Kzo9I GATC 2 cut(s) 187, 340
LmnI GCTCC 1 cut(s) 152
LpnPI CCDG 2 cut(s) 198, 229
LweI GCATC 2 cut(s) 283, 294
MaeIII GTNAC 1 cut(s) 386
MalI GATC 2 cut(s) 189, 342
MboI GATC 2 cut(s) 187, 340
MboII GAAGA 5 cut(s) 194, 211, 244, 284, 328
MhlI GDGCHC 1 cut(s) 267
MluCI AATT 3 cut(s) 22, 38, 435
MnlI CCTC 1 cut(s) 161
MroXI GAANNNNTTC 1 cut(s) 236
Mva1269I GAATGC 1 cut(s) 401
MvnI CGCG 1 cut(s) 30
NdeII GATC 2 cut(s) 187, 340
NlaIII CATG 2 cut(s) 167, 347
PctI GAATGC 1 cut(s) 401
PdmI GAANNNNTTC 1 cut(s) 236
PfeI GAWTC 2 cut(s) 101, 373
PkrI GCNGC 1 cut(s) 419
PsiI TTATAA 1 cut(s) 366
PstNI CAGNNNCTG 1 cut(s) 249
SatI GCNGC 1 cut(s) 418
Sau3AI GATC 2 cut(s) 187, 340
SduI GDGCHC 1 cut(s) 267
SetI ASST 5 cut(s) 90, 134, 149, 332, 372
SfaNI GCATC 2 cut(s) 283, 294
Sse9I AATT 3 cut(s) 22, 38, 435
SsiI CCGC 2 cut(s) 307, 417
TaaI ACNGT 3 cut(s) 78, 94, 251
TaqI TCGA 1 cut(s) 228
TasI AATT 3 cut(s) 22, 38, 435
TauI GCSGC 1 cut(s) 420
TfiI GAWTC 2 cut(s) 101, 373
TspDTI ATGAA 3 cut(s) 58, 214, 229
TspGWI ACGGA 1 cut(s) 353
XapI RAATTY 2 cut(s) 22, 435
XmnI GAANNNNTTC 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.