Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0010125

Physical Location & Seq

Genomic Coordinates Reverse (-)

11413026 .. 11416778

Gene Structure 3753 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGGCCAAGAACGTCGGAATTCTCGCCGTCGACATCTACTTCCCCCCTACCTGTATTCAGCAGGAAGCCTTGGAAGCTCATGATGGTGCCAGCAAAGGGAAGTACACTATCGGACTTGGACAAGATTGCATGGCGTTTTGTTCAGAGGTGGAAGATGTCATCTCAATGAGTTTGACAGTGGTGACCTCCCTTCTTGAGAAATATGGAATTGATCCAAAACAAATTGGTCGCCTCGAAAAACATGGAAATACTGACATTGAAGGTGTTGACTCAACTAATGCATGCTATGGGGGAACTGCAGCTTTATTCAACTGCGTCAATTGGGTAGAGAGTAGCTCTTGGGATGGACGCTATGGGCTTGTCGTGTGCACTGACAGTGCGGTCTATGCAGAAGGACCTGCACGACCTACTGGTGGAGCAGCTGCTATTGCCATGCTGATTGGACCTGATGCTCCTATTTCTTTTGAGAGCAAAATTAGGGGAAGTCATATGGCTCATGTCTATGATTTTTACAAGCCCGACCTTGCTAGTGAATATCCGGTTGTTGATGGAAAGCTTTCTCAAACATGTTACCTGAAGGCTCTTGATTCTTGCTACAAGGAATTATGTAAAAAGTATGAGAAATTGGAAGGTAAACAATTTTCTATTGCTGATGCTGAGTATTTCGTATTTCATTCTCCATATAACAAGCTCGTACAAAAAAGCTTTGCTCGTTTGGTGTTCAATGACTCCATAAGGAATGCCAGCTCCATTGATGAGGCCGGGAAAGAAAAGCTGGCTCCATTTGCTGACCTTCCTGGTGATGATAGCTACAATAGCCGGGATCTTGAAAAGGCATCCCAGCAAGTCGCAAAGCCTCTATACGACGCTAAGGTGGTACCTACAACTTTGGTACCAAAGCAAGTTGGCAACATGTACACTGCATCTATTTATGCAGCATTTGTATCCCTCCTTCACAACAAGCACAGCTCATTGGATGGCAAGCGGGTGATACTGTTCTCTTATGGAAGTGGCTCAGCTGCTACCATGTTCTCATTGCGTCTCAATGCTGGTCAACAGCCCTTTAGCTTGGAGAACATTGCAGCCGTTATGAATGTTGGAGAGAAGTTGAAAGCAAGACATGAGTTCCCTCCCGAGAAGTTTGTTGAAGTGATGAAGATCATGGAGCACAGGTATGGGGGCAAAGACTTTGCGACCAAGCAGGATATCAGCCTTCTACTTCCAGGCACATACTATCTTACTGAAGTCGACTCTAAGTATCGTAGATTCTATGCCAAGAAGGATGCCGCTGCCACCCCTGATGACAATGGTGTGGTTGCCAACTGTCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004421 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006084 GO:0006139 GO:0006163 GO:0006629 GO:0006637 GO:0006644 GO:0006720 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009117 GO:0009150 GO:0009240 GO:0009259 GO:0009506 GO:0009987 GO:0016740 GO:0016746 GO:0019287 GO:0019637 GO:0019693 GO:0030054 GO:0033865 GO:0033875 GO:0034032 GO:0034641 GO:0035383 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046490 GO:0046912 GO:0051186 GO:0055044 GO:0055086 GO:0071704 GO:0072521 GO:0090407 GO:1901135 GO:1901360 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00072 ko00280 ko00650 ko00900 ko01100 ko01110 ko01130 map00072 map00280 map00650 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

HMG_CoA_synt_C HMG_CoA_synt_N

Protein Analysis

444

Amino Acids

48.6

Weight (kDa)

5.91

Isoelectric Point (pI)

35.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG_CoA_synt_N	PF01154	2 - 79	2.8e-24	Hydroxymethylglutaryl-coenzyme A synthase N terminal
HMG_CoA_synt_N	PF01154	79 - 152	1.4e-35	Hydroxymethylglutaryl-coenzyme A synthase N terminal
HMG_CoA_synt_C	PF08540	153 - 427	1.1e-111	Hydroxymethylglutaryl-coenzyme A synthase C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010125)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11820 AT4G11820 AT4G11820
fragaria_vesca	FvH4_5g01350 FvH4_5g01350
malus_domestica	MD04G1069200.v1.1 MD06G1070000.v1.1
prunus_persica	Prupe.5G088900_v2.0.a1 Prupe.5G088900_v2.0.a1
pyrus_communis	pycom04g06300 pycom06g07050
rosa_chinensis	RchiOBHm_Chr7g0199551
rosa_laevigata	RLG00000003786
rosa_multiflora	Rmu_sc0007070.1_g000002
rosa_roxburghii	Rroxscaffold_3G00256620
rosa_rugosa	Rorug07G0055300
rosa_samantha	Rh7AG180000 Rh7BG183200 Rh7CG189000 Rh7DG182700
rosa_wichuraiana	Rw7G015810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	380
Acc36I	ACCTGC	1 cut(s)	406
Acc65I	GGTACC	2 cut(s)	877, 892
AccB1I	GGYRCC	3 cut(s)	86, 877, 892
AccI	GTMKAC	2 cut(s)	30, 1248
AciI	CCGC	3 cut(s)	380, 985, 1287
AclWI	GGATC	2 cut(s)	206, 831
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	18
AcuI	CTGAAG	2 cut(s)	596, 1263
AfaI	GTAC	5 cut(s)	104, 696, 879, 894, 917
AfiI	CCNNNNNNNGG	2 cut(s)	96, 413
AflIII	ACRYGT	2 cut(s)	566, 912
AgsI	TTSAA	6 cut(s)	260, 310, 724, 830, 1111, 1148
AjnI	CCWGG	2 cut(s)	796, 1222
Alw21I	GWGCWC	2 cut(s)	371, 1170
Alw26I	GTCTC	1 cut(s)	1046
Alw44I	GTGCAC	1 cut(s)	367
AlwI	GGATC	2 cut(s)	206, 831
Ama87I	CYCGRG	1 cut(s)	1133
AoxI	GGCC	2 cut(s)	3, 759
ApaLI	GTGCAC	1 cut(s)	367
ApeKI	GCWGC	7 cut(s)	299, 419, 422, 935, 1019, 1082, 1289
ApoI	RAATTY	1 cut(s)	18
Asp700I	GAANNNNTTC	1 cut(s)	556
Asp718I	GGTACC	2 cut(s)	877, 892
AspS9I	GGNCC	2 cut(s)	395, 443
AsuC2I	CCSGG	2 cut(s)	763, 821
AsuHPI	GGTGA	3 cut(s)	193, 812, 1000
AvaI	CYCGRG	1 cut(s)	1133
AvaII	GGWCC	2 cut(s)	395, 443
BaeGI	GKGCMC	1 cut(s)	371
BaeI	ACNNNNGTAYC	2 cut(s)	876, 909
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	3 cut(s)	86, 877, 892
BarI	GAAGNNNNNNTAC	2 cut(s)	936, 968
Bbv12I	GWGCWC	2 cut(s)	371, 1170
BbvI	GCAGC	7 cut(s)	311, 409, 431, 947, 1006, 1094, 1276
BccI	CCATC	4 cut(s)	77, 338, 542, 971
BceAI	ACGGC	2 cut(s)	11, 1070
BciT130I	CCWGG	2 cut(s)	798, 1224
BciVI	GTATCC	1 cut(s)	955
BcnI	CCSGG	2 cut(s)	763, 821
BcoDI	GTCTC	1 cut(s)	1046
BfaI	CTAG	1 cut(s)	528
BfmI	CTRYAG	1 cut(s)	297
BfuAI	ACCTGC	1 cut(s)	406
BfuI	GTATCC	1 cut(s)	955
BisI	GCNGC	8 cut(s)	300, 420, 423, 936, 1020, 1083, 1287, 1290
BlpI	GCTNAGC	1 cut(s)	1015
BlsI	GCNGC	8 cut(s)	301, 421, 424, 937, 1021, 1084, 1288, 1291
Bme1390I	CCNGG	4 cut(s)	763, 798, 821, 1224
Bme18I	GGWCC	2 cut(s)	395, 443
BmeT110I	CYCGRG	1 cut(s)	1133
BmgT120I	GGNCC	2 cut(s)	395, 443
BmiI	GGNNCC	4 cut(s)	88, 780, 879, 894
BmrFI	CCNGG	4 cut(s)	763, 798, 821, 1224
BmsI	GCATC	5 cut(s)	439, 643, 845, 932, 1273
BplI	GAGNNNNNCTC	2 cut(s)	320, 352
Bpu10I	CCTNAGC	1 cut(s)	870
Bpu1102I	GCTNAGC	1 cut(s)	1015
BpuEI	CTTGAG	1 cut(s)	215
BpuMI	CCSGG	2 cut(s)	763, 821
BsaBI	GATNNNNATC	1 cut(s)	1157
BsaJI	CCNNGG	1 cut(s)	69
BsaWI	WCCGGW	1 cut(s)	538
BsaXI	ACNNNNNCTCC	2 cut(s)	1157, 1187
Bsc4I	CCNNNNNNNGG	2 cut(s)	96, 413
Bse1I	ACTGG	1 cut(s)	415
Bse3DI	GCAATG	2 cut(s)	1034, 1077
Bse8I	GATNNNNATC	1 cut(s)	1157
BseBI	CCWGG	2 cut(s)	798, 1224
BseDI	CCNNGG	1 cut(s)	69
BseGI	GGATG	4 cut(s)	349, 836, 982, 1288
BseJI	GATNNNNATC	1 cut(s)	1157
BseLI	CCNNNNNNNGG	2 cut(s)	96, 413
BseMI	GCAATG	2 cut(s)	1034, 1077
BseMII	CTCAG	2 cut(s)	648, 1029
BseNI	ACTGG	1 cut(s)	415
BseSI	GKGCMC	1 cut(s)	371
BseXI	GCAGC	7 cut(s)	311, 409, 431, 947, 1006, 1094, 1276
BseYI	CCCAGC	1 cut(s)	840
BsgI	GTGCAG	1 cut(s)	384
BshFI	GGCC	2 cut(s)	5, 761
BshNI	GGYRCC	3 cut(s)	86, 877, 892
BsiHKAI	GWGCWC	2 cut(s)	371, 1170
BsiHKCI	CYCGRG	1 cut(s)	1133
BsiSI	CCGG	3 cut(s)	539, 762, 820
BslI	CCNNNNNNNGG	2 cut(s)	96, 413
BsmAI	GTCTC	1 cut(s)	1046
BsmBI	CGTCTC	1 cut(s)	1046
BsmI	GAATGC	1 cut(s)	745
BsnI	GGCC	2 cut(s)	5, 761
BsoBI	CYCGRG	1 cut(s)	1133
Bsp1286I	GDGCHC	2 cut(s)	371, 1170
Bsp1407I	TGTACA	1 cut(s)	915
Bsp143I	GATC	3 cut(s)	211, 823, 1158
Bsp1720I	GCTNAGC	1 cut(s)	1015
BspACI	CCGC	3 cut(s)	380, 985, 1287
BspANI	GGCC	2 cut(s)	5, 761
BspCNI	CTCAG	2 cut(s)	649, 1028
BspHI	TCATGA	1 cut(s)	79
BspLI	GGNNCC	4 cut(s)	88, 780, 879, 894
BspMAI	CTGCAG	1 cut(s)	301
BspMI	ACCTGC	1 cut(s)	406
BspPI	GGATC	2 cut(s)	206, 831
BspT107I	GGYRCC	3 cut(s)	86, 877, 892
BsrDI	GCAATG	2 cut(s)	1034, 1077
BsrGI	TGTACA	1 cut(s)	915
BsrI	ACTGG	1 cut(s)	415
BssECI	CCNNGG	1 cut(s)	69
BssMI	GATC	3 cut(s)	211, 823, 1158
BssT1I	CCWWGG	1 cut(s)	69
Bst2UI	CCWGG	2 cut(s)	798, 1224
Bst4CI	ACNGT	4 cut(s)	178, 377, 996, 1325
BstAUI	TGTACA	1 cut(s)	915
BstC8I	GCNNGC	5 cut(s)	91, 283, 745, 777, 983
BstDEI	CTNAG	4 cut(s)	657, 870, 1015, 1254
BstEII	GGTNACC	1 cut(s)	181
BstF5I	GGATG	4 cut(s)	349, 836, 982, 1288
BstKTI	GATC	3 cut(s)	214, 826, 1161
BstMAI	GTCTC	1 cut(s)	1046
BstMBI	GATC	3 cut(s)	211, 823, 1158
BstMWI	GCNNNNNNNGC	5 cut(s)	74, 386, 428, 785, 816
BstNI	CCWGG	2 cut(s)	798, 1224
BstNSI	RCATGY	3 cut(s)	285, 570, 916
BstPI	GGTNACC	1 cut(s)	181
BstSCI	CCNGG	4 cut(s)	761, 796, 819, 1222
BstSFI	CTRYAG	1 cut(s)	297
BstSLI	GKGCMC	1 cut(s)	371
BstV1I	GCAGC	7 cut(s)	311, 409, 431, 947, 1006, 1094, 1276
BstX2I	RGATCY	1 cut(s)	823
BstYI	RGATCY	1 cut(s)	823
BsuI	GTATCC	1 cut(s)	955
BsuRI	GGCC	2 cut(s)	5, 761
BtsCI	GGATG	4 cut(s)	349, 836, 982, 1288
BtsI	GCAGTG	1 cut(s)	918
BtsIMutI	CAGTG	4 cut(s)	183, 369, 382, 918
BveI	ACCTGC	1 cut(s)	406
Cac8I	GCNNGC	5 cut(s)	91, 283, 745, 777, 983
CciI	TCATGA	1 cut(s)	79
Cfr13I	GGNCC	2 cut(s)	395, 443
CseI	GACGC	4 cut(s)	304, 357, 875, 1028
Csp6I	GTAC	5 cut(s)	103, 695, 878, 893, 916
CviQI	GTAC	5 cut(s)	103, 695, 878, 893, 916
DdeI	CTNAG	4 cut(s)	657, 870, 1015, 1254
DpnI	GATC	3 cut(s)	213, 825, 1160
DpnII	GATC	3 cut(s)	211, 823, 1158
DrdI	GACNNNNNNGTC	1 cut(s)	380
DseDI	GACNNNNNNGTC	1 cut(s)	380
EaeI	YGGCCR	1 cut(s)	3
Eco130I	CCWWGG	1 cut(s)	69
Eco32I	GATATC	1 cut(s)	1207
Eco47I	GGWCC	2 cut(s)	395, 443
Eco57I	CTGAAG	2 cut(s)	596, 1263
Eco88I	CYCGRG	1 cut(s)	1133
Eco91I	GGTNACC	1 cut(s)	181
EcoO109I	RGGNCCY	1 cut(s)	395
EcoO65I	GGTNACC	1 cut(s)	181
EcoRI	GAATTC	1 cut(s)	18
EcoRII	CCWGG	2 cut(s)	796, 1222
EcoRV	GATATC	1 cut(s)	1207
EcoT14I	CCWWGG	1 cut(s)	69
EcoT22I	ATGCAT	1 cut(s)	283
ErhI	CCWWGG	1 cut(s)	69
Esp3I	CGTCTC	1 cut(s)	1046
FauI	CCCGC	1 cut(s)	978
FauNDI	CATATG	1 cut(s)	489
FblI	GTMKAC	2 cut(s)	30, 1248
Fnu4HI	GCNGC	8 cut(s)	300, 420, 423, 936, 1020, 1083, 1287, 1290
FokI	GGATG	4 cut(s)	356, 823, 989, 1295
Fsp4HI	GCNGC	8 cut(s)	300, 420, 423, 936, 1020, 1083, 1287, 1290
FspBI	CTAG	1 cut(s)	528
GluI	GCNGC	8 cut(s)	300, 420, 423, 936, 1020, 1083, 1287, 1290
GsaI	CCCAGC	1 cut(s)	844
HaeIII	GGCC	2 cut(s)	5, 761
HapII	CCGG	3 cut(s)	539, 762, 820
HgaI	GACGC	4 cut(s)	304, 357, 875, 1028
HincII	GTYRAC	4 cut(s)	31, 268, 1055, 1249
HindII	GTYRAC	4 cut(s)	31, 268, 1055, 1249
HindIII	AAGCTT	2 cut(s)	554, 703
HinfI	GANTC	5 cut(s)	269, 587, 728, 1250, 1266
HpaII	CCGG	3 cut(s)	539, 762, 820
HphI	GGTGA	3 cut(s)	193, 812, 1000
Hpy166II	GTNNAC	8 cut(s)	31, 105, 268, 369, 635, 918, 1055, 1249
Hpy188I	TCNGA	3 cut(s)	17, 113, 145
Hpy188III	TCNNGA	5 cut(s)	80, 194, 584, 827, 1133
Hpy8I	GTNNAC	8 cut(s)	31, 105, 268, 369, 635, 918, 1055, 1249
Hpy99I	CGWCG	3 cut(s)	17, 32, 869
HpyAV	CCTTC	9 cut(s)	200, 254, 386, 571, 623, 803, 962, 1223, 1273
HpyCH4III	ACNGT	4 cut(s)	178, 377, 996, 1325
HpyCH4IV	ACGT	1 cut(s)	12
HpyCH4V	TGCA	9 cut(s)	129, 281, 299, 369, 389, 401, 923, 935, 1082
HpyF10VI	GCNNNNNNNGC	5 cut(s)	74, 386, 428, 785, 816
HpyF3I	CTNAG	4 cut(s)	657, 870, 1015, 1254
HpySE526I	ACGT	1 cut(s)	12
KpnI	GGTACC	2 cut(s)	881, 896
Kzo9I	GATC	3 cut(s)	211, 823, 1158
LmnI	GCTCC	5 cut(s)	416, 457, 752, 784, 1165
Lsp1109I	GCAGC	7 cut(s)	311, 409, 431, 947, 1006, 1094, 1276
LweI	GCATC	5 cut(s)	439, 643, 845, 932, 1273
MaeI	CTAG	1 cut(s)	528
MaeII	ACGT	1 cut(s)	12
MaeIII	GTNAC	2 cut(s)	181, 569
MalI	GATC	3 cut(s)	213, 825, 1160
MboI	GATC	3 cut(s)	211, 823, 1158
MboII	GAAGA	2 cut(s)	164, 1168
MfeI	CAATTG	1 cut(s)	319
MflI	RGATCY	1 cut(s)	823
MhlI	GDGCHC	2 cut(s)	371, 1170
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	8 cut(s)	18, 207, 222, 319, 474, 602, 623, 638
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	263, 722, 1244
MmeI	TCCRAC	1 cut(s)	1078
MnlI	CCTC	7 cut(s)	139, 196, 242, 751, 867, 959, 1140
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	283
MroXI	GAANNNNTTC	1 cut(s)	556
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	4 cut(s)	84, 164, 501, 1173
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	422, 1019, 1289
MspI	CCGG	3 cut(s)	539, 762, 820
MspR9I	CCNGG	4 cut(s)	763, 798, 821, 1224
MunI	CAATTG	1 cut(s)	319
Mva1269I	GAATGC	1 cut(s)	745
MvaI	CCWGG	2 cut(s)	798, 1224
MwoI	GCNNNNNNNGC	5 cut(s)	74, 386, 428, 785, 816
NciI	CCSGG	2 cut(s)	763, 821
NdeI	CATATG	1 cut(s)	489
NdeII	GATC	3 cut(s)	211, 823, 1158
NlaIV	GGNNCC	4 cut(s)	88, 780, 879, 894
NmuCI	GTSAC	1 cut(s)	181
NsiI	ATGCAT	1 cut(s)	283
NspI	RCATGY	3 cut(s)	285, 570, 916
PaeI	GCATGC	1 cut(s)	285
PagI	TCATGA	1 cut(s)	79
PciI	ACATGT	2 cut(s)	566, 912
PctI	GAATGC	1 cut(s)	745
PdmI	GAANNNNTTC	1 cut(s)	556
PfeI	GAWTC	2 cut(s)	587, 1266
PkrI	GCNGC	8 cut(s)	301, 421, 424, 937, 1021, 1084, 1288, 1291
PleI	GAGTC	3 cut(s)	263, 722, 1244
PpsI	GAGTC	3 cut(s)	263, 722, 1244
PpuMI	RGGWCCY	1 cut(s)	395
PscI	ACATGT	2 cut(s)	566, 912
Psp5II	RGGWCCY	1 cut(s)	395
Psp6I	CCWGG	2 cut(s)	796, 1222
PspEI	GGTNACC	1 cut(s)	181
PspFI	CCCAGC	1 cut(s)	840
PspGI	CCWGG	2 cut(s)	796, 1222
PspN4I	GGNNCC	4 cut(s)	88, 780, 879, 894
PspPI	GGNCC	2 cut(s)	395, 443
PspPPI	RGGWCCY	1 cut(s)	395
PstI	CTGCAG	1 cut(s)	301
PsuI	RGATCY	1 cut(s)	823
PvuII	CAGCTG	2 cut(s)	422, 1019
RsaI	GTAC	5 cut(s)	104, 696, 879, 894, 917
RsaNI	GTAC	5 cut(s)	103, 695, 878, 893, 916
RseI	CAYNNNNRTG	4 cut(s)	84, 164, 501, 1173
SalI	GTCGAC	2 cut(s)	29, 1247
SatI	GCNGC	8 cut(s)	300, 420, 423, 936, 1020, 1083, 1287, 1290
Sau3AI	GATC	3 cut(s)	211, 823, 1158
Sau96I	GGNCC	2 cut(s)	395, 443
SchI	GAGTC	3 cut(s)	263, 722, 1244
ScrFI	CCNGG	4 cut(s)	763, 798, 821, 1224
SduI	GDGCHC	2 cut(s)	371, 1170
SfaNI	GCATC	5 cut(s)	439, 643, 845, 932, 1273
SfcI	CTRYAG	1 cut(s)	297
SinI	GGWCC	2 cut(s)	395, 443
SmiMI	CAYNNNNRTG	4 cut(s)	84, 164, 501, 1173
SmlI	CTYRAG	1 cut(s)	194
SmoI	CTYRAG	1 cut(s)	194
SphI	GCATGC	1 cut(s)	285
Sse9I	AATT	8 cut(s)	18, 207, 222, 319, 474, 602, 623, 638
SsiI	CCGC	3 cut(s)	380, 985, 1287
SspMI	CTAG	1 cut(s)	528
StyD4I	CCNGG	4 cut(s)	761, 796, 819, 1222
StyI	CCWWGG	1 cut(s)	69
TaaI	ACNGT	4 cut(s)	178, 377, 996, 1325
TaiI	ACGT	1 cut(s)	15
TaqI	TCGA	3 cut(s)	30, 234, 1248
TasI	AATT	8 cut(s)	18, 207, 222, 319, 474, 602, 623, 638
TatI	WGTACW	2 cut(s)	102, 915
TauI	GCSGC	1 cut(s)	1289
TfiI	GAWTC	2 cut(s)	587, 1266
TscAI	CASTG	4 cut(s)	183, 376, 382, 925
TseFI	GTSAC	1 cut(s)	181
TseI	GCWGC	7 cut(s)	299, 419, 422, 935, 1019, 1082, 1289
Tsp45I	GTSAC	1 cut(s)	181
TspDTI	ATGAA	3 cut(s)	662, 1106, 1169
TspRI	CASTG	4 cut(s)	183, 376, 382, 925
VneI	GTGCAC	1 cut(s)	367
VpaK11BI	GGWCC	2 cut(s)	395, 443
XapI	RAATTY	1 cut(s)	18
XceI	RCATGY	3 cut(s)	285, 570, 916
XmiI	GTMKAC	2 cut(s)	30, 1248
XmnI	GAANNNNTTC	1 cut(s)	556
XspI	CTAG	1 cut(s)	528
Zsp2I	ATGCAT	1 cut(s)	283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.