Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0007626

Physical Location & Seq

Genomic Coordinates Reverse (-)

14408776 .. 14413785

Gene Structure 5010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGGAGCAGAAAGGCATTCTGCTGTCGGCTTTGGGGGTGGGAATGGGAGTGGGAGTCGGTCTTGGGCTTGTTTCCGGCCAGACGATGAGCAAATGGACCGGAAACGACACGATGTCGAACGGCGTTACGCCAGATAGGGTGGAGCAGGAGTTGCTGCGACAGATCGTTGATGGAAGAGACAGCAAGGTCACATTCGACCAGTTCCCCTACTACCTCAGTGAACAGACGAGAGTTTTGATAACGAGTGCTGCCTATGTCCATCTTAAGCGAGCCGAGGTTTCGAAGTACACACGCAATCTTTCTCCTGCAAGTCGGGCTATTTTGCTCTCAGGACCTGCTGAACTTTACCAACAACAGCTTGCCAAGGCTTTAGCCCATTACTTCCAAGCCAAGTTACTGCTCTTGGACGTAACGGATTTTTCTCTAAAGGTGCAGAGCAAATATGGCAATACCAACAAAGCATCTTCTTTTAAAAGATCCACTTCAGAGGTGACACTAGAGCGGTTGTCTGGGCTGTTTGGATCATTTTCGCTCTTTCCGCAAAGGGAGGAACCGCCTAAAGGTAATTTACGAAGGCAAAGCAGTGGTGTGGATCTCGGATCAAGTGGGCTAGAAGGTTCTTGTAAGCCTTGCATGCTTCGTAGGAATGCTTCAGCTTCAGCTAATATCAGTAACCTTGCTTCTCAGAGCACTCCTGCAATTTCAGGTGAGTTTAAGCGCACAAGCAGCTGGTCTTTTGATGAGAAGCTTCTTATACAATCCCTGTACAGGGTTTTGGTTTTTGTCTCGAGTACTAGTCCCATTGTGCTGTATCTTAGGGACGTTGACAAGCTCTTATCTAGATCGCAAAGGATATACAACTTGTTCCAGAAAATGTTGAAGAAATTATCTGGAGCCGTGTTGATCCTTGGTTCACGTGTTGTGGATCTCGGTAGTGACAACAGAGAGGTCGAGGAGAGGCTTACTGCTCTTTTCCCTTACAACATTGAGATCAGGCCTCCCGAAAATGAATCACATCTTGTCAGCTGGAAGACTCAACTGGAGGAGGATATGAGAATGATTCAGGTTCAGGATAACAAAAACCACATCATGGAAGTTCTTTCGGCTAATGACCTTGATTGTGATGACCTTGGTTCAATCTGCATCGCAGACACAATCGACCTCAGTAACTATATAGAAGAGATTGTTGTATCAGCAGTTTCTCATCATTTGATGAATAACAAAGATCCTGAATACAGAAATGGGAAACTCGTCATTTCCTCCAAGAGTTTGTCCCATGGATTAAACATATTCCAAGAGGGAAAATCCAGTGGGAAAGATACAATGAAGCTGGTAGCCAAGGTTGAAGTGCCTAAGGAAGGAGGAAATGAATTGTCTGTTGGTGTAACAACAGAAACAAAAACCGAAAGCACTGCTCCTGCTGCAGAGGCTGCAGCAGCAAAACCGGATGCTGACAATTCAATTCCAGTATCAAGAGCTTCTGCAGAATTCGATAATGAATTTGAGAAACGCATAAGACCAGAGGTCATACCAGCTAACGAGATCGGTGTAACATTTGCTGATATTGGTGCCTTGGATGAGATTAAAGAATCCCTTCAGGAATTGGTAATGCTCCCGCTGCGAAGACCAGACCTTTTCAACGGGGGCCTACTAAAGCCTTGTAGAGGTATACTGCTATTTGGTCCCCCTGGAAGTGGGAAGACTATGCTGGCAAAGGCCATAGCTGGAGAGGCTGGAGCAAGCTTCATTAATGTATCCATGTCTACCATTACCTCTAAATGGTTTGGTGAAGATGAGAAAAATGTCCGAGCATTGTTTACCCTTGCAGCCAAAGTCTCTCCAACCATCATCTTTGTGGACGAGGTTGATAGCATGCTCGGGCAGCGAACAAGAGTTGGAGAGCATGAAGCTATGCGGAAAATAAAAAATGAATTCATGACTCACTGGGATGGGCTCTTGAGTAATCAAGGAGACCGAATCCTTGTTCTTGCTGCAACCAACAGACCATTTGACCTTGATGAAGCAATCATCAGGCGTTTTGAACGAAGAATTTTGGTGGGGCTACCGACAGTGGAGAACAGAGAGATGATTTTGAGAACCTTGTTGTCAAAAGAGAAGGTGGAAGCACGACTAGATTTCAAGGAGGTTGCAACTATGACTGAAGGATTTAGTGGAAGTGATCTTAAGAACTTATGTACAACAGCTGCCTATCGACCAGTTAGGGAATTAATACAGGCGGAGAGAAAGAAGGATCTGGAGAAAAAGATGACAGCTGCACAAGATGGTGCGGGAGAACGGAATCCAGAAGCTGCCCCAGTAACAAAAGTAGAACATAAAGAAGAAAGAGTGATCACCCTCAGGCCCCTAAACATGGAAGACTTCAAGCACGCGAAGAACCAGGTTGCAGCTAGCTTTGCAGCTCAGGGAGCCATGATGAATGAATTGAAGCAGTGGAACGATCTATACGGGGAAGGGGGGTCACGAAAGAGAGAGCAATTGAGTTACTTCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008144 GO:0008150 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017038 GO:0017076 GO:0017111 GO:0019867 GO:0030554 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045041 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

838

Amino Acids

92.72

Weight (kDa)

6.67

Isoelectric Point (pI)

40.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	372 - 432	2.8e-35	Domain of unknown function (DUF7751)
AAA	PF00004	557 - 687	1.1e-38	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	711 - 754	9.2e-14	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007626)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64110 AT1G64110 AT1G64110 AT1G64110 AT1G64110
fragaria_vesca	FvH4_5g03560 FvH4_5g03560 FvH4_5g03560 FvH4_5g03560
malus_domestica	MD06G1095300.v1.1 MD14G1115400.v1.1
prunus_persica	Prupe.5G110200_v2.0.a1
pyrus_communis	pycom06g09190
rosa_chinensis	RchiOBHm_Chr7g0196151
rosa_laevigata	RLG00000004060
rosa_roxburghii	Rroxscaffold_3G00259730
rosa_rugosa	Rorug07G0030900 Rorug07G0030900 Rorug07G0030900
rosa_samantha	Rh7AG156900 Rh7BG158600 Rh7CG162400 Rh7DG157800
rosa_wichuraiana	Rw7G013400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	185
Acc36I	ACCTGC	1 cut(s)	343
AccB1I	GGYRCC	1 cut(s)	1568
AccB7I	CCANNNNNTGG	1 cut(s)	1090
AccBSI	CCGCTC	1 cut(s)	502
AccI	GTMKAC	2 cut(s)	1669, 1763
AccII	CGCG	1 cut(s)	2390
AciI	CCGC	7 cut(s)	502, 539, 554, 1616, 1915, 2237, 2288
AclWI	GGATC	8 cut(s)	471, 529, 600, 607, 898, 933, 1220, 2259
AcoI	YGGCCR	1 cut(s)	76
AcsI	RAATTY	4 cut(s)	1487, 1499, 1931, 2049
AcuI	CTGAAG	5 cut(s)	468, 636, 642, 1580, 2181
AcvI	CACGTG	1 cut(s)	917
AfaI	GTAC	4 cut(s)	287, 767, 793, 2197
AfiI	CCNNNNNNNGG	9 cut(s)	560, 768, 769, 1090, 1358, 1664, 1694, 1779, 2371
AflII	CTTAAG	2 cut(s)	263, 2183
AflIII	ACRYGT	1 cut(s)	916
AgsI	TTSAA	9 cut(s)	880, 1137, 1346, 1461, 1639, 2042, 2140, 2383, 2446
AhdI	GACNNNNNGTC	2 cut(s)	112, 1523
AhlI	ACTAGT	1 cut(s)	794
AjnI	CCWGG	2 cut(s)	1687, 2397
AjuI	GAANNNNNNNTTGG	2 cut(s)	1362, 1394
Alw21I	GWGCWC	1 cut(s)	692
Alw26I	GTCTC	4 cut(s)	171, 790, 1840, 1965
AlwI	GGATC	8 cut(s)	471, 529, 600, 607, 898, 933, 1220, 2259
AlwNI	CAGNNNCTG	3 cut(s)	335, 1430, 2309
Ama87I	CYCGRG	2 cut(s)	787, 1877
AoxI	GGCC	5 cut(s)	76, 995, 1645, 1716, 2360
ApoI	RAATTY	4 cut(s)	1487, 1499, 1931, 2049
ArsI	GACNNNNNNTTYG	2 cut(s)	217, 249
AseI	ATTAAT	2 cut(s)	1749, 2228
Asp700I	GAANNNNTTC	1 cut(s)	1593
AspLEI	GCGC	1 cut(s)	720
AspS9I	GGNCC	5 cut(s)	96, 332, 1645, 1682, 2361
AsuHPI	GGTGA	4 cut(s)	502, 719, 1799, 2344
AsuII	TTCGAA	1 cut(s)	281
AsuNHI	GCTAGC	1 cut(s)	2408
AvaI	CYCGRG	2 cut(s)	787, 1877
AvaII	GGWCC	3 cut(s)	96, 332, 1682
AxyI	CCTNAGG	2 cut(s)	1353, 2357
BanI	GGYRCC	1 cut(s)	1568
BanII	GRGCYC	1 cut(s)	1956
BarI	GAAGNNNNNNTAC	4 cut(s)	634, 664, 666, 696
BbrPI	CACGTG	1 cut(s)	917
BbsI	GAAGAC	4 cut(s)	1037, 1630, 1706, 2382
Bbv12I	GWGCWC	1 cut(s)	692
BccI	CCATC	5 cut(s)	164, 267, 1853, 1943, 2276
BceAI	ACGGC	2 cut(s)	136, 881
BcgI	CGANNNNNNTGC	2 cut(s)	1394, 1428
BciT130I	CCWGG	2 cut(s)	1689, 2399
BciVI	GTATCC	1 cut(s)	1765
BclI	TGATCA	1 cut(s)	2349
BcoDI	GTCTC	4 cut(s)	171, 790, 1840, 1965
BcuI	ACTAGT	1 cut(s)	794
BfaI	CTAG	6 cut(s)	497, 611, 795, 840, 2132, 2409
BfmI	CTRYAG	3 cut(s)	1422, 1431, 1482
BfrI	CTTAAG	2 cut(s)	263, 2183
BfuAI	ACCTGC	1 cut(s)	343
BfuI	GTATCC	1 cut(s)	1765
BmcAI	AGTACT	1 cut(s)	793
Bme1390I	CCNGG	2 cut(s)	1689, 2399
Bme18I	GGWCC	3 cut(s)	96, 332, 1682
BmeRI	GACNNNNNGTC	2 cut(s)	112, 1523
BmeT110I	CYCGRG	2 cut(s)	787, 1877
BmgT120I	GGNCC	5 cut(s)	96, 332, 1645, 1682, 2361
BmiI	GGNNCC	7 cut(s)	552, 895, 1570, 1646, 1684, 2363, 2428
BmrFI	CCNGG	2 cut(s)	1689, 2399
BmrI	ACTGGG	2 cut(s)	1954, 2309
BmsI	GCATC	3 cut(s)	470, 1152, 1438
BmtI	GCTAGC	1 cut(s)	2412
BmuI	ACTGGG	2 cut(s)	1954, 2309
BpiI	GAAGAC	4 cut(s)	1037, 1630, 1706, 2382
BpmI	CTGGAG	5 cut(s)	912, 1061, 1746, 1755, 2276
Bpu10I	CCTNAGC	1 cut(s)	2421
Bpu14I	TTCGAA	1 cut(s)	281
BpuEI	CTTGAG	1 cut(s)	1978
BsaAI	YACGTR	1 cut(s)	917
BsaI	GGTCTC	1 cut(s)	1965
BsaJI	CCNNGG	8 cut(s)	273, 363, 907, 1129, 1276, 1338, 1572, 1687
BsaWI	WCCGGW	2 cut(s)	98, 1444
BsaXI	ACNNNNNCTCC	4 cut(s)	39, 69, 134, 164
Bsc4I	CCNNNNNNNGG	9 cut(s)	560, 768, 769, 1090, 1358, 1664, 1694, 1779, 2371
Bse1I	ACTGG	7 cut(s)	199, 1044, 1308, 1466, 1949, 2216, 2315
Bse21I	CCTNAGG	2 cut(s)	1353, 2357
BseBI	CCWGG	2 cut(s)	1689, 2399
BseDI	CCNNGG	8 cut(s)	273, 363, 907, 1129, 1276, 1338, 1572, 1687
BseGI	GGATG	3 cut(s)	1453, 1582, 1954
BseLI	CCNNNNNNNGG	9 cut(s)	560, 768, 769, 1090, 1358, 1664, 1694, 1779, 2371
BseMII	CTCAG	6 cut(s)	229, 342, 698, 1177, 2371, 2435
BseNI	ACTGG	7 cut(s)	199, 1044, 1308, 1466, 1949, 2216, 2315
BseRI	GAGGAG	2 cut(s)	968, 1058
BsgI	GTGCAG	2 cut(s)	452, 2259
Bsh1236I	CGCG	1 cut(s)	2390
BshFI	GGCC	5 cut(s)	78, 997, 1647, 1718, 2362
BshNI	GGYRCC	1 cut(s)	1568
BsiHKAI	GWGCWC	1 cut(s)	692
BsiHKCI	CYCGRG	2 cut(s)	787, 1877
BsiSI	CCGG	3 cut(s)	75, 99, 1445
BslFI	GGGAC	4 cut(s)	783, 833, 1258, 1668
BslI	CCNNNNNNNGG	9 cut(s)	560, 768, 769, 1090, 1358, 1664, 1694, 1779, 2371
BsmAI	GTCTC	4 cut(s)	171, 790, 1840, 1965
BsmFI	GGGAC	4 cut(s)	783, 833, 1258, 1668
BsmI	GAATGC	2 cut(s)	15, 652
BsnI	GGCC	5 cut(s)	78, 997, 1647, 1718, 2362
Bso31I	GGTCTC	1 cut(s)	1965
BsoBI	CYCGRG	2 cut(s)	787, 1877
Bsp119I	TTCGAA	1 cut(s)	281
Bsp1286I	GDGCHC	2 cut(s)	692, 1956
Bsp1407I	TGTACA	2 cut(s)	765, 2195
Bsp19I	CCATGG	1 cut(s)	1276
BspACI	CCGC	7 cut(s)	502, 539, 554, 1616, 1915, 2237, 2288
BspANI	GGCC	5 cut(s)	78, 997, 1647, 1718, 2362
BspCNI	CTCAG	6 cut(s)	228, 341, 697, 1176, 2370, 2434
BspFNI	CGCG	1 cut(s)	2390
BspHI	TCATGA	1 cut(s)	1935
BspLI	GGNNCC	7 cut(s)	552, 895, 1570, 1646, 1684, 2363, 2428
BspMAI	CTGCAG	3 cut(s)	1426, 1435, 1486
BspMI	ACCTGC	1 cut(s)	343
BspOI	GCTAGC	1 cut(s)	2412
BspPI	GGATC	8 cut(s)	471, 529, 600, 607, 898, 933, 1220, 2259
BspT104I	TTCGAA	1 cut(s)	281
BspT107I	GGYRCC	1 cut(s)	1568
BspTI	CTTAAG	2 cut(s)	263, 2183
BspTNI	GGTCTC	1 cut(s)	1965
BsrBI	CCGCTC	1 cut(s)	502
BsrGI	TGTACA	2 cut(s)	765, 2195
BsrI	ACTGG	7 cut(s)	199, 1044, 1308, 1466, 1949, 2216, 2315
BssECI	CCNNGG	8 cut(s)	273, 363, 907, 1129, 1276, 1338, 1572, 1687
BssNAI	GTATAC	1 cut(s)	1670
BssT1I	CCWWGG	6 cut(s)	363, 907, 1129, 1276, 1338, 1572
Bst1107I	GTATAC	1 cut(s)	1670
Bst2UI	CCWGG	2 cut(s)	1689, 2399
Bst4CI	ACNGT	1 cut(s)	2071
Bst6I	CTCTTC	2 cut(s)	169, 1173
BstAFI	CTTAAG	2 cut(s)	263, 2183
BstAPI	GCANNNNNTGC	2 cut(s)	151, 1430
BstAUI	TGTACA	2 cut(s)	765, 2195
BstBAI	YACGTR	1 cut(s)	917
BstBI	TTCGAA	1 cut(s)	281
BstC8I	GCNNGC	8 cut(s)	270, 360, 635, 1710, 1741, 1874, 2388, 2410
BstDEI	CTNAG	8 cut(s)	215, 328, 684, 815, 1163, 1353, 2357, 2421
BstDSI	CCRYGG	1 cut(s)	1276
BstENI	CCTNNNNNAGG	2 cut(s)	1356, 1662
BstF5I	GGATG	3 cut(s)	1453, 1582, 1954
BstFNI	CGCG	1 cut(s)	2390
BstHHI	GCGC	1 cut(s)	720
BstMAI	GTCTC	4 cut(s)	171, 790, 1840, 1965
BstNI	CCWGG	2 cut(s)	1689, 2399
BstNSI	RCATGY	2 cut(s)	637, 1876
BstSCI	CCNGG	2 cut(s)	1687, 2397
BstSFI	CTRYAG	3 cut(s)	1422, 1431, 1482
BstUI	CGCG	1 cut(s)	2390
BstV2I	GAAGAC	4 cut(s)	1037, 1630, 1706, 2382
BstX2I	RGATCY	5 cut(s)	476, 592, 925, 1225, 2251
BstYI	RGATCY	5 cut(s)	476, 592, 925, 1225, 2251
BstZ17I	GTATAC	1 cut(s)	1670
Bsu36I	CCTNAGG	2 cut(s)	1353, 2357
BsuI	GTATCC	1 cut(s)	1765
BsuRI	GGCC	5 cut(s)	78, 997, 1647, 1718, 2362
BtgI	CCRYGG	1 cut(s)	1276
BtgZI	GCGATG	1 cut(s)	1129
BtsCI	GGATG	3 cut(s)	1453, 1582, 1954
BtsI	GCAGTG	3 cut(s)	589, 1410, 2456
BtsIMutI	CAGTG	7 cut(s)	223, 589, 1315, 1410, 1942, 2076, 2456
BveI	ACCTGC	1 cut(s)	343
Cac8I	GCNNGC	8 cut(s)	270, 360, 635, 1710, 1741, 1874, 2388, 2410
CaiI	CAGNNNCTG	3 cut(s)	335, 1430, 2309
CciI	TCATGA	1 cut(s)	1935
CfoI	GCGC	1 cut(s)	720
Cfr13I	GGNCC	5 cut(s)	96, 332, 1645, 1682, 2361
CsiI	ACCWGGT	1 cut(s)	2397
Csp6I	GTAC	4 cut(s)	286, 766, 792, 2196
CviAII	CATG	9 cut(s)	634, 1090, 1277, 1759, 1873, 1904, 1936, 2371, 2431
CviQI	GTAC	4 cut(s)	286, 766, 792, 2196
DdeI	CTNAG	8 cut(s)	215, 328, 684, 815, 1163, 1353, 2357, 2421
DraI	TTTAAA	1 cut(s)	472
DrdI	GACNNNNNNGTC	1 cut(s)	185
DriI	GACNNNNNGTC	2 cut(s)	112, 1523
DseDI	GACNNNNNNGTC	1 cut(s)	185
EaeI	YGGCCR	1 cut(s)	76
Eam1104I	CTCTTC	2 cut(s)	169, 1173
Eam1105I	GACNNNNNGTC	2 cut(s)	112, 1523
EarI	CTCTTC	2 cut(s)	169, 1173
EciI	GGCGGA	1 cut(s)	2252
Eco130I	CCWWGG	6 cut(s)	363, 907, 1129, 1276, 1338, 1572
Eco147I	AGGCCT	1 cut(s)	997
Eco24I	GRGCYC	1 cut(s)	1956
Eco31I	GGTCTC	1 cut(s)	1965
Eco47I	GGWCC	3 cut(s)	96, 332, 1682
Eco57I	CTGAAG	5 cut(s)	468, 636, 642, 1580, 2181
Eco72I	CACGTG	1 cut(s)	917
Eco81I	CCTNAGG	2 cut(s)	1353, 2357
Eco88I	CYCGRG	2 cut(s)	787, 1877
EcoNI	CCTNNNNNAGG	2 cut(s)	1356, 1662
EcoO109I	RGGNCCY	3 cut(s)	332, 1645, 2361
EcoRI	GAATTC	2 cut(s)	1487, 1931
EcoRII	CCWGG	2 cut(s)	1687, 2397
EcoT14I	CCWWGG	6 cut(s)	363, 907, 1129, 1276, 1338, 1572
EcoT38I	GRGCYC	1 cut(s)	1956
ErhI	CCWWGG	6 cut(s)	363, 907, 1129, 1276, 1338, 1572
FaeI	CATG	9 cut(s)	637, 1093, 1280, 1762, 1876, 1907, 1939, 2374, 2434
FalI	AAGNNNNNCTT	4 cut(s)	466, 498, 1578, 1610
FaqI	GGGAC	4 cut(s)	783, 833, 1258, 1668
FatI	CATG	9 cut(s)	633, 1089, 1276, 1758, 1872, 1903, 1935, 2370, 2430
FauI	CCCGC	2 cut(s)	1623, 2281
FbaI	TGATCA	1 cut(s)	2349
FblI	GTMKAC	2 cut(s)	1669, 1763
FokI	GGATG	3 cut(s)	1460, 1589, 1961
FriOI	GRGCYC	1 cut(s)	1956
FspBI	CTAG	6 cut(s)	497, 611, 795, 840, 2132, 2409
GlaI	GCGC	1 cut(s)	719
GsuI	CTGGAG	5 cut(s)	912, 1061, 1746, 1755, 2276
HaeIII	GGCC	5 cut(s)	78, 997, 1647, 1718, 2362
HapII	CCGG	3 cut(s)	75, 99, 1445
HhaI	GCGC	1 cut(s)	720
Hin1II	CATG	9 cut(s)	637, 1093, 1280, 1762, 1876, 1907, 1939, 2374, 2434
Hin6I	GCGC	1 cut(s)	718
HinP1I	GCGC	1 cut(s)	718
HincII	GTYRAC	1 cut(s)	826
HindII	GTYRAC	1 cut(s)	826
HindIII	AAGCTT	2 cut(s)	746, 1741
HinfI	GANTC	8 cut(s)	54, 1010, 1033, 1060, 1589, 1939, 1977, 2299
HpaII	CCGG	3 cut(s)	75, 99, 1445
HphI	GGTGA	4 cut(s)	502, 719, 1799, 2344
Hpy166II	GTNNAC	8 cut(s)	221, 288, 826, 914, 1670, 1764, 1818, 1858
Hpy188I	TCNGA	4 cut(s)	487, 599, 687, 1808
Hpy8I	GTNNAC	8 cut(s)	221, 288, 826, 914, 1670, 1764, 1818, 1858
HpyAV	CCTTC	8 cut(s)	567, 608, 1352, 1604, 2110, 2156, 2242, 2465
HpyCH4III	ACNGT	1 cut(s)	2071
HpyCH4IV	ACGT	3 cut(s)	408, 822, 916
HpyF3I	CTNAG	8 cut(s)	215, 328, 684, 815, 1163, 1353, 2357, 2421
HpySE526I	ACGT	3 cut(s)	408, 822, 916
Hsp92II	CATG	9 cut(s)	637, 1093, 1280, 1762, 1876, 1907, 1939, 2374, 2434
HspAI	GCGC	1 cut(s)	718
Ksp22I	TGATCA	1 cut(s)	2349
LmnI	GCTCC	7 cut(s)	4, 142, 893, 1420, 1617, 1736, 2426
LweI	GCATC	3 cut(s)	470, 1152, 1438
MabI	ACCWGGT	1 cut(s)	2397
MaeI	CTAG	6 cut(s)	497, 611, 795, 840, 2132, 2409
MaeII	ACGT	3 cut(s)	408, 822, 916
MbiI	CCGCTC	1 cut(s)	502
MfeI	CAATTG	1 cut(s)	2495
MflI	RGATCY	5 cut(s)	476, 592, 925, 1225, 2251
MhlI	GDGCHC	2 cut(s)	692, 1956
MlyI	GAGTC	3 cut(s)	63, 1027, 1933
MmeI	TCCRAC	2 cut(s)	1865, 1876
MroXI	GAANNNNTTC	1 cut(s)	1593
MseI	TTAA	8 cut(s)	264, 471, 714, 1283, 1584, 1749, 2184, 2228
MslI	CAYNNNNRTG	2 cut(s)	1853, 1947
MspA1I	CMGCKG	5 cut(s)	729, 1026, 1618, 2204, 2273
MspCI	CTTAAG	2 cut(s)	263, 2183
MspI	CCGG	3 cut(s)	75, 99, 1445
MspR9I	CCNGG	2 cut(s)	1689, 2399
MunI	CAATTG	1 cut(s)	2495
Mva1269I	GAATGC	2 cut(s)	15, 652
MvaI	CCWGG	2 cut(s)	1689, 2399
MvnI	CGCG	1 cut(s)	2390
NcoI	CCATGG	1 cut(s)	1276
NheI	GCTAGC	1 cut(s)	2408
NlaIII	CATG	9 cut(s)	637, 1093, 1280, 1762, 1876, 1907, 1939, 2374, 2434
NlaIV	GGNNCC	7 cut(s)	552, 895, 1570, 1646, 1684, 2363, 2428
NmeAIII	GCCGAG	1 cut(s)	298
NmuCI	GTSAC	4 cut(s)	187, 490, 935, 2478
NspI	RCATGY	2 cut(s)	637, 1876
NspV	TTCGAA	1 cut(s)	281
PaeI	GCATGC	2 cut(s)	637, 1876
PaeR7I	CTCGAG	1 cut(s)	787
PagI	TCATGA	1 cut(s)	1935
PceI	AGGCCT	1 cut(s)	997
PctI	GAATGC	2 cut(s)	15, 652
PdmI	GAANNNNTTC	1 cut(s)	1593
PfeI	GAWTC	5 cut(s)	1010, 1060, 1589, 1977, 2299
PflMI	CCANNNNNTGG	1 cut(s)	1090
PleI	GAGTC	3 cut(s)	62, 1027, 1933
PmaCI	CACGTG	1 cut(s)	917
PmlI	CACGTG	1 cut(s)	917
PpsI	GAGTC	3 cut(s)	62, 1027, 1933
Ppu21I	YACGTR	1 cut(s)	917
PpuMI	RGGWCCY	1 cut(s)	332
PshBI	ATTAAT	2 cut(s)	1749, 2228
Psp5II	RGGWCCY	1 cut(s)	332
Psp6I	CCWGG	2 cut(s)	1687, 2397
PspCI	CACGTG	1 cut(s)	917
PspGI	CCWGG	2 cut(s)	1687, 2397
PspN4I	GGNNCC	7 cut(s)	552, 895, 1570, 1646, 1684, 2363, 2428
PspPI	GGNCC	5 cut(s)	96, 332, 1645, 1682, 2361
PspPPI	RGGWCCY	1 cut(s)	332
PsrI	GAACNNNNNNTAC	2 cut(s)	2447, 2479
PstI	CTGCAG	3 cut(s)	1426, 1435, 1486
PstNI	CAGNNNCTG	3 cut(s)	335, 1430, 2309
PsuI	RGATCY	5 cut(s)	476, 592, 925, 1225, 2251
PvuII	CAGCTG	4 cut(s)	729, 1026, 2204, 2273
RsaI	GTAC	4 cut(s)	287, 767, 793, 2197
RsaNI	GTAC	4 cut(s)	286, 766, 792, 2196
RseI	CAYNNNNRTG	2 cut(s)	1853, 1947
SaqAI	TTAA	8 cut(s)	264, 471, 714, 1283, 1584, 1749, 2184, 2228
Sau96I	GGNCC	5 cut(s)	96, 332, 1645, 1682, 2361
ScaI	AGTACT	1 cut(s)	793
SchI	GAGTC	3 cut(s)	63, 1027, 1933
ScrFI	CCNGG	2 cut(s)	1689, 2399
SduI	GDGCHC	2 cut(s)	692, 1956
SexAI	ACCWGGT	1 cut(s)	2397
SfaNI	GCATC	3 cut(s)	470, 1152, 1438
SfcI	CTRYAG	3 cut(s)	1422, 1431, 1482
Sfr274I	CTCGAG	1 cut(s)	787
SfuI	TTCGAA	1 cut(s)	281
SinI	GGWCC	3 cut(s)	96, 332, 1682
SlaI	CTCGAG	1 cut(s)	787
SmiMI	CAYNNNNRTG	2 cut(s)	1853, 1947
SmlI	CTYRAG	4 cut(s)	263, 787, 1957, 2183
SmoI	CTYRAG	4 cut(s)	263, 787, 1957, 2183
SpeI	ACTAGT	1 cut(s)	794
SphI	GCATGC	2 cut(s)	637, 1876
SseBI	AGGCCT	1 cut(s)	997
SsiI	CCGC	7 cut(s)	502, 539, 554, 1616, 1915, 2237, 2288
SspMI	CTAG	6 cut(s)	497, 611, 795, 840, 2132, 2409
StuI	AGGCCT	1 cut(s)	997
StyD4I	CCNGG	2 cut(s)	1687, 2397
StyI	CCWWGG	6 cut(s)	363, 907, 1129, 1276, 1338, 1572
TaaI	ACNGT	1 cut(s)	2071
TaiI	ACGT	3 cut(s)	411, 825, 919
TaqI	TCGA	8 cut(s)	116, 195, 281, 788, 951, 1158, 1491, 2212
TaqII	GACCGA	2 cut(s)	47, 1989
TatI	WGTACW	4 cut(s)	285, 765, 791, 2195
TfiI	GAWTC	5 cut(s)	1010, 1060, 1589, 1977, 2299
Tru1I	TTAA	8 cut(s)	264, 471, 714, 1283, 1584, 1749, 2184, 2228
Tru9I	TTAA	8 cut(s)	264, 471, 714, 1283, 1584, 1749, 2184, 2228
TscAI	CASTG	7 cut(s)	223, 589, 1315, 1417, 1949, 2076, 2456
TseFI	GTSAC	4 cut(s)	187, 490, 935, 2478
Tsp45I	GTSAC	4 cut(s)	187, 490, 935, 2478
TspGWI	ACGGA	2 cut(s)	428, 2311
TspRI	CASTG	7 cut(s)	223, 589, 1315, 1417, 1949, 2076, 2456
Van91I	CCANNNNNTGG	1 cut(s)	1090
Vha464I	CTTAAG	2 cut(s)	263, 2183
VpaK11BI	GGWCC	3 cut(s)	96, 332, 1682
VspI	ATTAAT	2 cut(s)	1749, 2228
XagI	CCTNNNNNAGG	2 cut(s)	1356, 1662
XapI	RAATTY	4 cut(s)	1487, 1499, 1931, 2049
XbaI	TCTAGA	1 cut(s)	839
XceI	RCATGY	2 cut(s)	637, 1876
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1852
XhoI	CTCGAG	1 cut(s)	787
XmiI	GTMKAC	2 cut(s)	1669, 1763
XmnI	GAANNNNTTC	1 cut(s)	1593
XspI	CTAG	6 cut(s)	497, 611, 795, 840, 2132, 2409
ZrmI	AGTACT	1 cut(s)	793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.