High mobility group B protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G11080 AT4G23800 AT4G23800 |
| fragaria_vesca | FvH4_5g04120 FvH4_5g04120 |
| malus_domestica | MD06G1103000.v1.1 MD14G1121900.v1.1 |
| prunus_persica | Prupe.5G115800_v2.0.a1 |
| pyrus_communis | pycom06g09760 |
| rosa_chinensis | RchiOBHm_Chr7g0195371 |
| rosa_multiflora | Rmu_sc0007366.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00260530 |
| rosa_rugosa | Rorug07G0022800 |
| rosa_samantha | Rh7AG150100 Rh7BG151600 Rh7DG151200 |
| rosa_wichuraiana | Rw7G012810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 265 |
| Acc36I | ACCTGC | 1 cut(s) | 934 |
| Acc65I | GGTACC | 1 cut(s) | 687 |
| AccB1I | GGYRCC | 1 cut(s) | 687 |
| AccBSI | CCGCTC | 1 cut(s) | 125 |
| AccII | CGCG | 1 cut(s) | 738 |
| AciI | CCGC | 2 cut(s) | 123, 227 |
| AclWI | GGATC | 3 cut(s) | 130, 860, 873 |
| AcuI | CTGAAG | 5 cut(s) | 371, 407, 621, 681, 1449 |
| AcyI | GRCGYC | 1 cut(s) | 120 |
| AfaI | GTAC | 1 cut(s) | 689 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 54, 166 |
| AgsI | TTSAA | 6 cut(s) | 373, 436, 463, 803, 820, 874 |
| AjnI | CCWGG | 2 cut(s) | 690, 1333 |
| Alw21I | GWGCWC | 1 cut(s) | 348 |
| Alw26I | GTCTC | 3 cut(s) | 118, 625, 1324 |
| AlwI | GGATC | 3 cut(s) | 130, 860, 873 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 545 |
| AoxI | GGCC | 6 cut(s) | 45, 243, 403, 536, 636, 693 |
| ApeKI | GCWGC | 7 cut(s) | 89, 224, 307, 442, 935, 1156, 1424 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 31 |
| Asp718I | GGTACC | 1 cut(s) | 687 |
| AspLEI | GCGC | 1 cut(s) | 738 |
| AspS9I | GGNCC | 3 cut(s) | 45, 403, 636 |
| AsuHPI | GGTGA | 2 cut(s) | 604, 989 |
| BaeGI | GKGCMC | 1 cut(s) | 61 |
| BamHI | GGATCC | 1 cut(s) | 865 |
| BanI | GGYRCC | 1 cut(s) | 687 |
| BanII | GRGCYC | 2 cut(s) | 134, 348 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 659, 691, 692, 724 |
| BauI | CACGAG | 1 cut(s) | 176 |
| BbsI | GAAGAC | 4 cut(s) | 263, 380, 788, 1184 |
| Bbv12I | GWGCWC | 1 cut(s) | 348 |
| BbvI | GCAGC | 7 cut(s) | 101, 211, 294, 429, 922, 1168, 1436 |
| BccI | CCATC | 5 cut(s) | 85, 154, 421, 1021, 1057 |
| BciT130I | CCWGG | 2 cut(s) | 692, 1335 |
| BcoDI | GTCTC | 3 cut(s) | 118, 625, 1324 |
| BfaI | CTAG | 1 cut(s) | 1032 |
| BfmI | CTRYAG | 4 cut(s) | 443, 812, 936, 1154 |
| BfuAI | ACCTGC | 1 cut(s) | 934 |
| BglII | AGATCT | 2 cut(s) | 366, 388 |
| BisI | GCNGC | 9 cut(s) | 90, 123, 225, 228, 308, 443, 936, 1157, 1425 |
| BlsI | GCNGC | 9 cut(s) | 91, 124, 226, 229, 309, 444, 937, 1158, 1426 |
| Bme1390I | CCNGG | 2 cut(s) | 692, 1335 |
| BmgT120I | GGNCC | 3 cut(s) | 45, 403, 636 |
| BmiI | GGNNCC | 3 cut(s) | 637, 689, 867 |
| BmrFI | CCNGG | 2 cut(s) | 692, 1335 |
| BmsI | GCATC | 3 cut(s) | 763, 892, 1286 |
| BpiI | GAAGAC | 4 cut(s) | 263, 380, 788, 1184 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 170, 202, 172, 204 |
| BpuEI | CTTGAG | 3 cut(s) | 47, 437, 1148 |
| BsaHI | GRCGYC | 1 cut(s) | 120 |
| BsaI | GGTCTC | 2 cut(s) | 118, 1324 |
| BsaJI | CCNNGG | 4 cut(s) | 41, 339, 471, 1334 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 54, 166 |
| Bse3DI | GCAATG | 3 cut(s) | 756, 1368, 1440 |
| BseBI | CCWGG | 2 cut(s) | 692, 1335 |
| BseDI | CCNNGG | 4 cut(s) | 41, 339, 471, 1334 |
| BseGI | GGATG | 4 cut(s) | 200, 367, 883, 1277 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 54, 166 |
| BseMI | GCAATG | 3 cut(s) | 756, 1368, 1440 |
| BseMII | CTCAG | 5 cut(s) | 117, 203, 516, 570, 948 |
| BseRI | GAGGAG | 6 cut(s) | 356, 779, 782, 1037, 1223, 1340 |
| BseSI | GKGCMC | 1 cut(s) | 61 |
| BseXI | GCAGC | 7 cut(s) | 101, 211, 294, 429, 922, 1168, 1436 |
| Bsh1236I | CGCG | 1 cut(s) | 738 |
| BshFI | GGCC | 6 cut(s) | 47, 245, 405, 538, 638, 695 |
| BshNI | GGYRCC | 1 cut(s) | 687 |
| BsiHKAI | GWGCWC | 1 cut(s) | 348 |
| BslFI | GGGAC | 1 cut(s) | 1351 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 54, 166 |
| BsmAI | GTCTC | 3 cut(s) | 118, 625, 1324 |
| BsmFI | GGGAC | 1 cut(s) | 1351 |
| BsmI | GAATGC | 1 cut(s) | 476 |
| BsnI | GGCC | 6 cut(s) | 47, 245, 405, 538, 638, 695 |
| Bso31I | GGTCTC | 2 cut(s) | 118, 1324 |
| Bsp1286I | GDGCHC | 3 cut(s) | 61, 134, 348 |
| Bsp143I | GATC | 7 cut(s) | 135, 366, 388, 568, 582, 865, 969 |
| Bsp19I | CCATGG | 1 cut(s) | 471 |
| BspACI | CCGC | 2 cut(s) | 123, 227 |
| BspANI | GGCC | 6 cut(s) | 47, 245, 405, 538, 638, 695 |
| BspCNI | CTCAG | 5 cut(s) | 116, 202, 517, 571, 949 |
| BspFNI | CGCG | 1 cut(s) | 738 |
| BspLI | GGNNCC | 3 cut(s) | 637, 689, 867 |
| BspMAI | CTGCAG | 3 cut(s) | 447, 940, 1158 |
| BspMI | ACCTGC | 1 cut(s) | 934 |
| BspPI | GGATC | 3 cut(s) | 130, 860, 873 |
| BspQI | GCTCTTC | 1 cut(s) | 1116 |
| BspT107I | GGYRCC | 1 cut(s) | 687 |
| BspTNI | GGTCTC | 2 cut(s) | 118, 1324 |
| BsrBI | CCGCTC | 1 cut(s) | 125 |
| BsrDI | GCAATG | 3 cut(s) | 756, 1368, 1440 |
| BssECI | CCNNGG | 4 cut(s) | 41, 339, 471, 1334 |
| BssMI | GATC | 7 cut(s) | 135, 366, 388, 568, 582, 865, 969 |
| BssNI | GRCGYC | 1 cut(s) | 120 |
| BssSI | CACGAG | 1 cut(s) | 176 |
| BssT1I | CCWWGG | 2 cut(s) | 41, 471 |
| Bst2BI | CACGAG | 1 cut(s) | 176 |
| Bst2UI | CCWGG | 2 cut(s) | 692, 1335 |
| Bst4CI | ACNGT | 4 cut(s) | 13, 267, 816, 952 |
| Bst6I | CTCTTC | 6 cut(s) | 657, 675, 1083, 1110, 1116, 1392 |
| BstACI | GRCGYC | 1 cut(s) | 120 |
| BstC8I | GCNNGC | 4 cut(s) | 49, 312, 540, 1275 |
| BstDEI | CTNAG | 7 cut(s) | 103, 189, 234, 378, 525, 579, 957 |
| BstDSI | CCRYGG | 1 cut(s) | 471 |
| BstF5I | GGATG | 4 cut(s) | 200, 367, 883, 1277 |
| BstFNI | CGCG | 1 cut(s) | 738 |
| BstHHI | GCGC | 1 cut(s) | 738 |
| BstKTI | GATC | 7 cut(s) | 138, 369, 391, 571, 585, 868, 972 |
| BstMAI | GTCTC | 3 cut(s) | 118, 625, 1324 |
| BstMBI | GATC | 7 cut(s) | 135, 366, 388, 568, 582, 865, 969 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 304, 418, 448, 935, 1270, 1313, 1430, 1439 |
| BstNI | CCWGG | 2 cut(s) | 692, 1335 |
| BstSCI | CCNGG | 2 cut(s) | 690, 1333 |
| BstSFI | CTRYAG | 4 cut(s) | 443, 812, 936, 1154 |
| BstSLI | GKGCMC | 1 cut(s) | 61 |
| BstUI | CGCG | 1 cut(s) | 738 |
| BstV1I | GCAGC | 7 cut(s) | 101, 211, 294, 429, 922, 1168, 1436 |
| BstV2I | GAAGAC | 4 cut(s) | 263, 380, 788, 1184 |
| BstX2I | RGATCY | 3 cut(s) | 366, 388, 865 |
| BstYI | RGATCY | 3 cut(s) | 366, 388, 865 |
| BsuRI | GGCC | 6 cut(s) | 47, 245, 405, 538, 638, 695 |
| BtgI | CCRYGG | 1 cut(s) | 471 |
| BtgZI | GCGATG | 1 cut(s) | 329 |
| BtsCI | GGATG | 4 cut(s) | 200, 367, 883, 1277 |
| BtsIMutI | CAGTG | 4 cut(s) | 9, 661, 954, 1370 |
| BveI | ACCTGC | 1 cut(s) | 934 |
| Cac8I | GCNNGC | 4 cut(s) | 49, 312, 540, 1275 |
| CaiI | CAGNNNCTG | 1 cut(s) | 545 |
| CfoI | GCGC | 1 cut(s) | 738 |
| Cfr13I | GGNCC | 3 cut(s) | 45, 403, 636 |
| CseI | GACGC | 1 cut(s) | 128 |
| Csp6I | GTAC | 1 cut(s) | 688 |
| CviAII | CATG | 3 cut(s) | 472, 994, 1145 |
| CviQI | GTAC | 1 cut(s) | 688 |
| DdeI | CTNAG | 7 cut(s) | 103, 189, 234, 378, 525, 579, 957 |
| DpnI | GATC | 7 cut(s) | 137, 368, 390, 570, 584, 867, 971 |
| DpnII | GATC | 7 cut(s) | 135, 366, 388, 568, 582, 865, 969 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 265 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 265 |
| Eam1104I | CTCTTC | 6 cut(s) | 657, 675, 1083, 1110, 1116, 1392 |
| EarI | CTCTTC | 6 cut(s) | 657, 675, 1083, 1110, 1116, 1392 |
| Ecl136II | GAGCTC | 1 cut(s) | 346 |
| Eco130I | CCWWGG | 2 cut(s) | 41, 471 |
| Eco24I | GRGCYC | 2 cut(s) | 134, 348 |
| Eco31I | GGTCTC | 2 cut(s) | 118, 1324 |
| Eco53kI | GAGCTC | 1 cut(s) | 346 |
| Eco57I | CTGAAG | 5 cut(s) | 371, 407, 621, 681, 1449 |
| EcoICRI | GAGCTC | 1 cut(s) | 346 |
| EcoRII | CCWGG | 2 cut(s) | 690, 1333 |
| EcoT14I | CCWWGG | 2 cut(s) | 41, 471 |
| EcoT22I | ATGCAT | 1 cut(s) | 756 |
| EcoT38I | GRGCYC | 2 cut(s) | 134, 348 |
| ErhI | CCWWGG | 2 cut(s) | 41, 471 |
| FaeI | CATG | 3 cut(s) | 475, 997, 1148 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 405, 437 |
| FaqI | GGGAC | 1 cut(s) | 1351 |
| FatI | CATG | 3 cut(s) | 471, 993, 1144 |
| Fnu4HI | GCNGC | 9 cut(s) | 90, 123, 225, 228, 308, 443, 936, 1157, 1425 |
| FokI | GGATG | 4 cut(s) | 187, 374, 870, 1264 |
| FriOI | GRGCYC | 2 cut(s) | 134, 348 |
| Fsp4HI | GCNGC | 9 cut(s) | 90, 123, 225, 228, 308, 443, 936, 1157, 1425 |
| FspBI | CTAG | 1 cut(s) | 1032 |
| GlaI | GCGC | 1 cut(s) | 737 |
| GluI | GCNGC | 9 cut(s) | 90, 123, 225, 228, 308, 443, 936, 1157, 1425 |
| HaeIII | GGCC | 6 cut(s) | 47, 245, 405, 538, 638, 695 |
| HgaI | GACGC | 1 cut(s) | 128 |
| HhaI | GCGC | 1 cut(s) | 738 |
| Hin1I | GRCGYC | 1 cut(s) | 120 |
| Hin1II | CATG | 3 cut(s) | 475, 997, 1148 |
| Hin6I | GCGC | 1 cut(s) | 736 |
| HinP1I | GCGC | 1 cut(s) | 736 |
| HincII | GTYRAC | 1 cut(s) | 1252 |
| HindII | GTYRAC | 1 cut(s) | 1252 |
| HindIII | AAGCTT | 3 cut(s) | 419, 705, 1095 |
| HinfI | GANTC | 2 cut(s) | 152, 193 |
| HphI | GGTGA | 2 cut(s) | 604, 989 |
| Hpy166II | GTNNAC | 4 cut(s) | 595, 909, 1072, 1252 |
| Hpy188I | TCNGA | 6 cut(s) | 118, 129, 151, 192, 252, 426 |
| Hpy188III | TCNNGA | 9 cut(s) | 81, 105, 277, 349, 370, 586, 622, 1165, 1195 |
| Hpy8I | GTNNAC | 4 cut(s) | 595, 909, 1072, 1252 |
| Hpy99I | CGWCG | 1 cut(s) | 271 |
| HpyCH4III | ACNGT | 4 cut(s) | 13, 267, 816, 952 |
| HpyCH4IV | ACGT | 1 cut(s) | 651 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 304, 418, 448, 935, 1270, 1313, 1430, 1439 |
| HpyF3I | CTNAG | 7 cut(s) | 103, 189, 234, 378, 525, 579, 957 |
| HpySE526I | ACGT | 1 cut(s) | 651 |
| Hsp92I | GRCGYC | 1 cut(s) | 120 |
| Hsp92II | CATG | 3 cut(s) | 475, 997, 1148 |
| HspAI | GCGC | 1 cut(s) | 736 |
| KpnI | GGTACC | 1 cut(s) | 691 |
| Kzo9I | GATC | 7 cut(s) | 135, 366, 388, 568, 582, 865, 969 |
| LguI | GCTCTTC | 1 cut(s) | 1116 |
| LmnI | GCTCC | 5 cut(s) | 130, 343, 351, 547, 1210 |
| Lsp1109I | GCAGC | 7 cut(s) | 101, 211, 294, 429, 922, 1168, 1436 |
| LweI | GCATC | 3 cut(s) | 763, 892, 1286 |
| MaeI | CTAG | 1 cut(s) | 1032 |
| MaeII | ACGT | 1 cut(s) | 651 |
| MaeIII | GTNAC | 2 cut(s) | 718, 952 |
| MalI | GATC | 7 cut(s) | 137, 368, 390, 570, 584, 867, 971 |
| MbiI | CCGCTC | 1 cut(s) | 125 |
| MboI | GATC | 7 cut(s) | 135, 366, 388, 568, 582, 865, 969 |
| MfeI | CAATTG | 1 cut(s) | 483 |
| MflI | RGATCY | 3 cut(s) | 366, 388, 865 |
| MhlI | GDGCHC | 3 cut(s) | 61, 134, 348 |
| MluCI | AATT | 3 cut(s) | 483, 1010, 1486 |
| MlyI | GAGTC | 2 cut(s) | 146, 187 |
| MmeI | TCCRAC | 2 cut(s) | 180, 1302 |
| Mph1103I | ATGCAT | 1 cut(s) | 756 |
| MseI | TTAA | 2 cut(s) | 612, 1485 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1375 |
| MspA1I | CMGCKG | 1 cut(s) | 1427 |
| MspR9I | CCNGG | 2 cut(s) | 692, 1335 |
| MunI | CAATTG | 1 cut(s) | 483 |
| Mva1269I | GAATGC | 1 cut(s) | 476 |
| MvaI | CCWGG | 2 cut(s) | 692, 1335 |
| MvnI | CGCG | 1 cut(s) | 738 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 304, 418, 448, 935, 1270, 1313, 1430, 1439 |
| NcoI | CCATGG | 1 cut(s) | 471 |
| NdeII | GATC | 7 cut(s) | 135, 366, 388, 568, 582, 865, 969 |
| NlaIII | CATG | 3 cut(s) | 475, 997, 1148 |
| NlaIV | GGNNCC | 3 cut(s) | 637, 689, 867 |
| NmeAIII | GCCGAG | 2 cut(s) | 431, 721 |
| NmuCI | GTSAC | 2 cut(s) | 718, 952 |
| NsiI | ATGCAT | 1 cut(s) | 756 |
| PciSI | GCTCTTC | 1 cut(s) | 1116 |
| PctI | GAATGC | 1 cut(s) | 476 |
| PkrI | GCNGC | 9 cut(s) | 91, 124, 226, 229, 309, 444, 937, 1158, 1426 |
| PleI | GAGTC | 2 cut(s) | 146, 187 |
| PpsI | GAGTC | 2 cut(s) | 146, 187 |
| Psp124BI | GAGCTC | 1 cut(s) | 348 |
| Psp6I | CCWGG | 2 cut(s) | 690, 1333 |
| PspGI | CCWGG | 2 cut(s) | 690, 1333 |
| PspN4I | GGNNCC | 3 cut(s) | 637, 689, 867 |
| PspPI | GGNCC | 3 cut(s) | 45, 403, 636 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 795, 827 |
| PstI | CTGCAG | 3 cut(s) | 447, 940, 1158 |
| PstNI | CAGNNNCTG | 1 cut(s) | 545 |
| PsuI | RGATCY | 3 cut(s) | 366, 388, 865 |
| PvuII | CAGCTG | 1 cut(s) | 1427 |
| RsaI | GTAC | 1 cut(s) | 689 |
| RsaNI | GTAC | 1 cut(s) | 688 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1375 |
| SacI | GAGCTC | 1 cut(s) | 348 |
| SapI | GCTCTTC | 1 cut(s) | 1116 |
| SaqAI | TTAA | 2 cut(s) | 612, 1485 |
| SatI | GCNGC | 9 cut(s) | 90, 123, 225, 228, 308, 443, 936, 1157, 1425 |
| Sau3AI | GATC | 7 cut(s) | 135, 366, 388, 568, 582, 865, 969 |
| Sau96I | GGNCC | 3 cut(s) | 45, 403, 636 |
| SchI | GAGTC | 2 cut(s) | 146, 187 |
| ScrFI | CCNGG | 2 cut(s) | 692, 1335 |
| SduI | GDGCHC | 3 cut(s) | 61, 134, 348 |
| SfaNI | GCATC | 3 cut(s) | 763, 892, 1286 |
| SfcI | CTRYAG | 4 cut(s) | 443, 812, 936, 1154 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1375 |
| SmlI | CTYRAG | 3 cut(s) | 62, 452, 1163 |
| SmoI | CTYRAG | 3 cut(s) | 62, 452, 1163 |
| Sse9I | AATT | 3 cut(s) | 483, 1010, 1486 |
| SsiI | CCGC | 2 cut(s) | 123, 227 |
| SspMI | CTAG | 1 cut(s) | 1032 |
| SstI | GAGCTC | 1 cut(s) | 348 |
| StyD4I | CCNGG | 2 cut(s) | 690, 1333 |
| StyI | CCWWGG | 2 cut(s) | 41, 471 |
| TaaI | ACNGT | 4 cut(s) | 13, 267, 816, 952 |
| TaiI | ACGT | 1 cut(s) | 654 |
| TaqI | TCGA | 4 cut(s) | 276, 288, 324, 623 |
| TasI | AATT | 3 cut(s) | 483, 1010, 1486 |
| TauI | GCSGC | 2 cut(s) | 125, 230 |
| Tru1I | TTAA | 2 cut(s) | 612, 1485 |
| Tru9I | TTAA | 2 cut(s) | 612, 1485 |
| TscAI | CASTG | 4 cut(s) | 16, 661, 961, 1377 |
| TseFI | GTSAC | 2 cut(s) | 718, 952 |
| TseI | GCWGC | 7 cut(s) | 89, 224, 307, 442, 935, 1156, 1424 |
| Tsp45I | GTSAC | 2 cut(s) | 718, 952 |
| TspDTI | ATGAA | 7 cut(s) | 179, 332, 413, 1145, 1161, 1256, 1403 |
| TspGWI | ACGGA | 1 cut(s) | 1013 |
| TspRI | CASTG | 4 cut(s) | 16, 661, 961, 1377 |
| XspI | CTAG | 1 cut(s) | 1032 |
| Zsp2I | ATGCAT | 1 cut(s) | 756 |