High mobility group B protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G11080 AT4G23800 AT4G23800 |
| fragaria_vesca | FvH4_5g04120 FvH4_5g04120 |
| malus_domestica | MD06G1103000.v1.1 MD14G1121900.v1.1 |
| prunus_persica | Prupe.5G115800_v2.0.a1 |
| pyrus_communis | pycom06g09760 |
| rosa_chinensis | RchiOBHm_Chr7g0195371 |
| rosa_multiflora | Rmu_sc0007366.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00260530 |
| rosa_rugosa | Rorug07G0022800 |
| rosa_samantha | Rh7AG150100 Rh7BG151600 Rh7DG151200 |
| rosa_wichuraiana | Rw7G012810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 252 |
| AciI | CCGC | 1 cut(s) | 653 |
| AclWI | GGATC | 3 cut(s) | 130, 818, 831 |
| AcuI | CTGAAG | 3 cut(s) | 89, 251, 365 |
| AcyI | GRCGYC | 2 cut(s) | 182, 207 |
| AfaI | GTAC | 1 cut(s) | 647 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 363, 591, 721 |
| AflII | CTTAAG | 1 cut(s) | 335 |
| AgeI | ACCGGT | 1 cut(s) | 935 |
| AjiI | CACGTC | 1 cut(s) | 156 |
| AjnI | CCWGG | 3 cut(s) | 38, 47, 648 |
| AluBI | AGCT | 7 cut(s) | 265, 334, 349, 379, 391, 746, 1058 |
| AluI | AGCT | 7 cut(s) | 265, 334, 349, 379, 391, 746, 1058 |
| Alw21I | GWGCWC | 3 cut(s) | 351, 393, 732 |
| Alw26I | GTCTC | 2 cut(s) | 124, 212 |
| AlwI | GGATC | 3 cut(s) | 130, 818, 831 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 274 |
| Ama87I | CYCGRG | 1 cut(s) | 281 |
| AoxI | GGCC | 4 cut(s) | 72, 478, 494, 594 |
| ApeKI | GCWGC | 5 cut(s) | 170, 173, 841, 884, 1058 |
| AsiGI | ACCGGT | 1 cut(s) | 935 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 416, 1113 |
| AspLEI | GCGC | 1 cut(s) | 67 |
| AspS9I | GGNCC | 5 cut(s) | 51, 241, 479, 594, 974 |
| AsuHPI | GGTGA | 2 cut(s) | 925, 950 |
| AvaI | CYCGRG | 1 cut(s) | 281 |
| AvaII | GGWCC | 3 cut(s) | 51, 241, 974 |
| AxyI | CCTNAGG | 1 cut(s) | 558 |
| BamHI | GGATCC | 1 cut(s) | 823 |
| BanII | GRGCYC | 2 cut(s) | 351, 393 |
| BauI | CACGAG | 1 cut(s) | 131 |
| BbsI | GAAGAC | 3 cut(s) | 299, 746, 1145 |
| Bbv12I | GWGCWC | 3 cut(s) | 351, 393, 732 |
| BbvI | GCAGC | 5 cut(s) | 182, 185, 853, 896, 1045 |
| BccI | CCATC | 7 cut(s) | 91, 379, 457, 505, 673, 982, 1070 |
| BceAI | ACGGC | 1 cut(s) | 616 |
| BciT130I | CCWGG | 3 cut(s) | 40, 49, 650 |
| BcoDI | GTCTC | 2 cut(s) | 124, 212 |
| BfaI | CTAG | 1 cut(s) | 917 |
| BfmI | CTRYAG | 3 cut(s) | 245, 615, 1066 |
| BfoI | RGCGCY | 1 cut(s) | 68 |
| BfrI | CTTAAG | 1 cut(s) | 335 |
| BfuAI | ACCTGC | 1 cut(s) | 252 |
| BglII | AGATCT | 1 cut(s) | 324 |
| BisI | GCNGC | 5 cut(s) | 171, 174, 842, 885, 1059 |
| BlsI | GCNGC | 5 cut(s) | 172, 175, 843, 886, 1060 |
| Bme1390I | CCNGG | 3 cut(s) | 40, 49, 650 |
| Bme18I | GGWCC | 3 cut(s) | 51, 241, 974 |
| BmeT110I | CYCGRG | 1 cut(s) | 281 |
| BmgBI | CACGTC | 1 cut(s) | 156 |
| BmgT120I | GGNCC | 5 cut(s) | 51, 241, 479, 594, 974 |
| BmiI | GGNNCC | 3 cut(s) | 595, 825, 975 |
| BmrFI | CCNGG | 3 cut(s) | 40, 49, 650 |
| BpiI | GAAGAC | 3 cut(s) | 299, 746, 1145 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 125, 157 |
| BpuEI | CTTGAG | 2 cut(s) | 377, 1109 |
| BsaHI | GRCGYC | 2 cut(s) | 182, 207 |
| BsaI | GGTCTC | 1 cut(s) | 124 |
| BsaJI | CCNNGG | 4 cut(s) | 47, 177, 357, 429 |
| BsaWI | WCCGGW | 1 cut(s) | 935 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 209, 239, 290, 320 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 363, 591, 721 |
| Bse118I | RCCGGY | 1 cut(s) | 935 |
| Bse21I | CCTNAGG | 1 cut(s) | 558 |
| Bse3DI | GCAATG | 1 cut(s) | 714 |
| BseBI | CCWGG | 3 cut(s) | 40, 49, 650 |
| BseDI | CCNNGG | 4 cut(s) | 47, 177, 357, 429 |
| BseGI | GGATG | 2 cut(s) | 102, 325 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 363, 591, 721 |
| BseMI | GCAATG | 1 cut(s) | 714 |
| BseMII | CTCAG | 3 cut(s) | 158, 266, 549 |
| BseRI | GAGGAG | 7 cut(s) | 272, 314, 356, 359, 737, 740, 977 |
| BseXI | GCAGC | 5 cut(s) | 182, 185, 853, 896, 1045 |
| BshFI | GGCC | 4 cut(s) | 74, 480, 496, 596 |
| BshTI | ACCGGT | 1 cut(s) | 935 |
| BsiHKAI | GWGCWC | 3 cut(s) | 351, 393, 732 |
| BsiHKCI | CYCGRG | 1 cut(s) | 281 |
| BsiSI | CCGG | 2 cut(s) | 111, 936 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 363, 591, 721 |
| BsmAI | GTCTC | 2 cut(s) | 124, 212 |
| BsmBI | CGTCTC | 1 cut(s) | 212 |
| BsmI | GAATGC | 2 cut(s) | 434, 898 |
| BsnI | GGCC | 4 cut(s) | 74, 480, 496, 596 |
| Bso31I | GGTCTC | 1 cut(s) | 124 |
| BsoBI | CYCGRG | 1 cut(s) | 281 |
| Bsp1286I | GDGCHC | 3 cut(s) | 351, 393, 732 |
| Bsp143I | GATC | 4 cut(s) | 135, 324, 526, 823 |
| Bsp19I | CCATGG | 1 cut(s) | 429 |
| BspACI | CCGC | 1 cut(s) | 653 |
| BspANI | GGCC | 4 cut(s) | 74, 480, 496, 596 |
| BspCNI | CTCAG | 3 cut(s) | 157, 267, 550 |
| BspLI | GGNNCC | 3 cut(s) | 595, 825, 975 |
| BspMAI | CTGCAG | 3 cut(s) | 249, 619, 1070 |
| BspMI | ACCTGC | 1 cut(s) | 252 |
| BspPI | GGATC | 3 cut(s) | 130, 818, 831 |
| BspTI | CTTAAG | 1 cut(s) | 335 |
| BspTNI | GGTCTC | 1 cut(s) | 124 |
| BsrDI | GCAATG | 1 cut(s) | 714 |
| BsrFI | RCCGGY | 1 cut(s) | 935 |
| BssAI | RCCGGY | 1 cut(s) | 935 |
| BssECI | CCNNGG | 4 cut(s) | 47, 177, 357, 429 |
| BssMI | GATC | 4 cut(s) | 135, 324, 526, 823 |
| BssNI | GRCGYC | 2 cut(s) | 182, 207 |
| BssSI | CACGAG | 1 cut(s) | 131 |
| BssT1I | CCWWGG | 3 cut(s) | 177, 357, 429 |
| Bst2BI | CACGAG | 1 cut(s) | 131 |
| Bst2UI | CCWGG | 3 cut(s) | 40, 49, 650 |
| Bst4CI | ACNGT | 2 cut(s) | 118, 195 |
| Bst6I | CTCTTC | 6 cut(s) | 615, 633, 978, 1044, 1071, 1077 |
| BstACI | GRCGYC | 2 cut(s) | 182, 207 |
| BstAFI | CTTAAG | 1 cut(s) | 335 |
| BstC8I | GCNNGC | 1 cut(s) | 882 |
| BstDEI | CTNAG | 3 cut(s) | 144, 275, 558 |
| BstDSI | CCRYGG | 1 cut(s) | 429 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 719 |
| BstF5I | GGATG | 2 cut(s) | 102, 325 |
| BstH2I | RGCGCY | 1 cut(s) | 68 |
| BstHHI | GCGC | 1 cut(s) | 67 |
| BstKTI | GATC | 4 cut(s) | 138, 327, 529, 826 |
| BstMAI | GTCTC | 2 cut(s) | 124, 212 |
| BstMBI | GATC | 4 cut(s) | 135, 324, 526, 823 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 71, 179, 376, 893 |
| BstNI | CCWGG | 3 cut(s) | 40, 49, 650 |
| BstNSI | RCATGY | 1 cut(s) | 772 |
| BstSCI | CCNGG | 3 cut(s) | 38, 47, 648 |
| BstSFI | CTRYAG | 3 cut(s) | 245, 615, 1066 |
| BstV1I | GCAGC | 5 cut(s) | 182, 185, 853, 896, 1045 |
| BstV2I | GAAGAC | 3 cut(s) | 299, 746, 1145 |
| BstX2I | RGATCY | 3 cut(s) | 135, 324, 823 |
| BstYI | RGATCY | 3 cut(s) | 135, 324, 823 |
| Bsu36I | CCTNAGG | 1 cut(s) | 558 |
| BsuRI | GGCC | 4 cut(s) | 74, 480, 496, 596 |
| BtgI | CCRYGG | 1 cut(s) | 429 |
| BtgZI | GCGATG | 1 cut(s) | 483 |
| BtrI | CACGTC | 1 cut(s) | 156 |
| BtsCI | GGATG | 2 cut(s) | 102, 325 |
| BtsI | GCAGTG | 2 cut(s) | 9, 612 |
| BtsIMutI | CAGTG | 3 cut(s) | 9, 536, 612 |
| BveI | ACCTGC | 1 cut(s) | 252 |
| Cac8I | GCNNGC | 1 cut(s) | 882 |
| CaiI | CAGNNNCTG | 1 cut(s) | 274 |
| CfoI | GCGC | 1 cut(s) | 67 |
| Cfr10I | RCCGGY | 1 cut(s) | 935 |
| Cfr13I | GGNCC | 5 cut(s) | 51, 241, 479, 594, 974 |
| CseI | GACGC | 3 cut(s) | 171, 196, 229 |
| Csp6I | GTAC | 1 cut(s) | 646 |
| CspAI | ACCGGT | 1 cut(s) | 935 |
| CviAII | CATG | 4 cut(s) | 430, 769, 955, 1106 |
| CviQI | GTAC | 1 cut(s) | 646 |
| DdeI | CTNAG | 3 cut(s) | 144, 275, 558 |
| DpnI | GATC | 4 cut(s) | 137, 326, 528, 825 |
| DpnII | GATC | 4 cut(s) | 135, 324, 526, 823 |
| Eam1104I | CTCTTC | 6 cut(s) | 615, 633, 978, 1044, 1071, 1077 |
| EarI | CTCTTC | 6 cut(s) | 615, 633, 978, 1044, 1071, 1077 |
| EciI | GGCGGA | 1 cut(s) | 668 |
| Ecl136II | GAGCTC | 2 cut(s) | 349, 391 |
| Eco130I | CCWWGG | 3 cut(s) | 177, 357, 429 |
| Eco24I | GRGCYC | 2 cut(s) | 351, 393 |
| Eco31I | GGTCTC | 1 cut(s) | 124 |
| Eco47I | GGWCC | 3 cut(s) | 51, 241, 974 |
| Eco53kI | GAGCTC | 2 cut(s) | 349, 391 |
| Eco57I | CTGAAG | 3 cut(s) | 89, 251, 365 |
| Eco81I | CCTNAGG | 1 cut(s) | 558 |
| Eco88I | CYCGRG | 1 cut(s) | 281 |
| EcoICRI | GAGCTC | 2 cut(s) | 349, 391 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 719 |
| EcoO109I | RGGNCCY | 1 cut(s) | 241 |
| EcoRII | CCWGG | 3 cut(s) | 38, 47, 648 |
| EcoT14I | CCWWGG | 3 cut(s) | 177, 357, 429 |
| EcoT38I | GRGCYC | 2 cut(s) | 351, 393 |
| ErhI | CCWWGG | 3 cut(s) | 177, 357, 429 |
| Esp3I | CGTCTC | 1 cut(s) | 212 |
| FaeI | CATG | 4 cut(s) | 433, 772, 958, 1109 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 363, 395 |
| FatI | CATG | 4 cut(s) | 429, 768, 954, 1105 |
| FauNDI | CATATG | 1 cut(s) | 979 |
| Fnu4HI | GCNGC | 5 cut(s) | 171, 174, 842, 885, 1059 |
| FokI | GGATG | 2 cut(s) | 89, 332 |
| FriOI | GRGCYC | 2 cut(s) | 351, 393 |
| Fsp4HI | GCNGC | 5 cut(s) | 171, 174, 842, 885, 1059 |
| FspBI | CTAG | 1 cut(s) | 917 |
| GlaI | GCGC | 1 cut(s) | 66 |
| GluI | GCNGC | 5 cut(s) | 171, 174, 842, 885, 1059 |
| HaeII | RGCGCY | 1 cut(s) | 68 |
| HaeIII | GGCC | 4 cut(s) | 74, 480, 496, 596 |
| HapII | CCGG | 2 cut(s) | 111, 936 |
| HgaI | GACGC | 3 cut(s) | 171, 196, 229 |
| HhaI | GCGC | 1 cut(s) | 67 |
| Hin1I | GRCGYC | 2 cut(s) | 182, 207 |
| Hin1II | CATG | 4 cut(s) | 433, 772, 958, 1109 |
| Hin6I | GCGC | 1 cut(s) | 65 |
| HinP1I | GCGC | 1 cut(s) | 65 |
| HindIII | AAGCTT | 3 cut(s) | 263, 332, 377 |
| HinfI | GANTC | 2 cut(s) | 353, 535 |
| HpaII | CCGG | 2 cut(s) | 111, 936 |
| HphI | GGTGA | 2 cut(s) | 925, 950 |
| Hpy166II | GTNNAC | 1 cut(s) | 867 |
| Hpy188I | TCNGA | 3 cut(s) | 124, 276, 384 |
| Hpy188III | TCNNGA | 8 cut(s) | 211, 235, 283, 328, 365, 394, 917, 1126 |
| Hpy8I | GTNNAC | 1 cut(s) | 867 |
| Hpy99I | CGWCG | 2 cut(s) | 160, 187 |
| HpyCH4III | ACNGT | 2 cut(s) | 118, 195 |
| HpyCH4IV | ACGT | 1 cut(s) | 155 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 71, 179, 376, 893 |
| HpyF3I | CTNAG | 3 cut(s) | 144, 275, 558 |
| HpySE526I | ACGT | 1 cut(s) | 155 |
| Hsp92I | GRCGYC | 2 cut(s) | 182, 207 |
| Hsp92II | CATG | 4 cut(s) | 433, 772, 958, 1109 |
| HspAI | GCGC | 1 cut(s) | 65 |
| Kzo9I | GATC | 4 cut(s) | 135, 324, 526, 823 |
| LmnI | GCTCC | 5 cut(s) | 346, 367, 388, 727, 964 |
| Lsp1109I | GCAGC | 5 cut(s) | 182, 185, 853, 896, 1045 |
| MaeI | CTAG | 1 cut(s) | 917 |
| MaeII | ACGT | 1 cut(s) | 155 |
| MaeIII | GTNAC | 2 cut(s) | 610, 1166 |
| MalI | GATC | 4 cut(s) | 137, 326, 528, 825 |
| MboI | GATC | 4 cut(s) | 135, 324, 526, 823 |
| MflI | RGATCY | 3 cut(s) | 135, 324, 823 |
| MhlI | GDGCHC | 3 cut(s) | 351, 393, 732 |
| MluCI | AATT | 4 cut(s) | 15, 407, 441, 773 |
| MroXI | GAANNNNTTC | 2 cut(s) | 416, 1113 |
| MseI | TTAA | 2 cut(s) | 336, 570 |
| MspCI | CTTAAG | 1 cut(s) | 335 |
| MspI | CCGG | 2 cut(s) | 111, 936 |
| MspR9I | CCNGG | 3 cut(s) | 40, 49, 650 |
| Mva1269I | GAATGC | 2 cut(s) | 434, 898 |
| MvaI | CCWGG | 3 cut(s) | 40, 49, 650 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 71, 179, 376, 893 |
| NcoI | CCATGG | 1 cut(s) | 429 |
| NdeI | CATATG | 1 cut(s) | 979 |
| NdeII | GATC | 4 cut(s) | 135, 324, 526, 823 |
| NlaIII | CATG | 4 cut(s) | 433, 772, 958, 1109 |
| NlaIV | GGNNCC | 3 cut(s) | 595, 825, 975 |
| NmuCI | GTSAC | 1 cut(s) | 610 |
| NspI | RCATGY | 1 cut(s) | 772 |
| PaeR7I | CTCGAG | 1 cut(s) | 281 |
| PctI | GAATGC | 2 cut(s) | 434, 898 |
| PdmI | GAANNNNTTC | 2 cut(s) | 416, 1113 |
| PfeI | GAWTC | 2 cut(s) | 353, 535 |
| PflFI | GACNNNGTC | 1 cut(s) | 223 |
| PinAI | ACCGGT | 1 cut(s) | 935 |
| PkrI | GCNGC | 5 cut(s) | 172, 175, 843, 886, 1060 |
| PpuMI | RGGWCCY | 1 cut(s) | 241 |
| Psp124BI | GAGCTC | 2 cut(s) | 351, 393 |
| Psp5II | RGGWCCY | 1 cut(s) | 241 |
| Psp6I | CCWGG | 3 cut(s) | 38, 47, 648 |
| PspGI | CCWGG | 3 cut(s) | 38, 47, 648 |
| PspN4I | GGNNCC | 3 cut(s) | 595, 825, 975 |
| PspPI | GGNCC | 5 cut(s) | 51, 241, 479, 594, 974 |
| PspPPI | RGGWCCY | 1 cut(s) | 241 |
| PstI | CTGCAG | 3 cut(s) | 249, 619, 1070 |
| PstNI | CAGNNNCTG | 1 cut(s) | 274 |
| PsuI | RGATCY | 3 cut(s) | 135, 324, 823 |
| PsyI | GACNNNGTC | 1 cut(s) | 223 |
| RsaI | GTAC | 1 cut(s) | 647 |
| RsaNI | GTAC | 1 cut(s) | 646 |
| SacI | GAGCTC | 2 cut(s) | 351, 393 |
| SaqAI | TTAA | 2 cut(s) | 336, 570 |
| SatI | GCNGC | 5 cut(s) | 171, 174, 842, 885, 1059 |
| Sau3AI | GATC | 4 cut(s) | 135, 324, 526, 823 |
| Sau96I | GGNCC | 5 cut(s) | 51, 241, 479, 594, 974 |
| SbfI | CCTGCAGG | 1 cut(s) | 249 |
| ScrFI | CCNGG | 3 cut(s) | 40, 49, 650 |
| SdaI | CCTGCAGG | 1 cut(s) | 249 |
| SduI | GDGCHC | 3 cut(s) | 351, 393, 732 |
| SfcI | CTRYAG | 3 cut(s) | 245, 615, 1066 |
| Sfr274I | CTCGAG | 1 cut(s) | 281 |
| SgrAI | CRCCGGYG | 1 cut(s) | 935 |
| SinI | GGWCC | 3 cut(s) | 51, 241, 974 |
| SlaI | CTCGAG | 1 cut(s) | 281 |
| SmlI | CTYRAG | 4 cut(s) | 281, 335, 392, 1124 |
| SmoI | CTYRAG | 4 cut(s) | 281, 335, 392, 1124 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 249 |
| Sse9I | AATT | 4 cut(s) | 15, 407, 441, 773 |
| SsiI | CCGC | 1 cut(s) | 653 |
| SspMI | CTAG | 1 cut(s) | 917 |
| SstI | GAGCTC | 2 cut(s) | 351, 393 |
| StyD4I | CCNGG | 3 cut(s) | 38, 47, 648 |
| StyI | CCWWGG | 3 cut(s) | 177, 357, 429 |
| TaaI | ACNGT | 2 cut(s) | 118, 195 |
| TaiI | ACGT | 1 cut(s) | 158 |
| TaqI | TCGA | 7 cut(s) | 86, 185, 197, 227, 234, 282, 351 |
| TasI | AATT | 4 cut(s) | 15, 407, 441, 773 |
| TfiI | GAWTC | 2 cut(s) | 353, 535 |
| Tru1I | TTAA | 2 cut(s) | 336, 570 |
| Tru9I | TTAA | 2 cut(s) | 336, 570 |
| TscAI | CASTG | 3 cut(s) | 16, 536, 619 |
| TseFI | GTSAC | 1 cut(s) | 610 |
| TseI | GCWGC | 5 cut(s) | 170, 173, 841, 884, 1058 |
| Tsp45I | GTSAC | 1 cut(s) | 610 |
| TspDTI | ATGAA | 5 cut(s) | 503, 651, 996, 1106, 1122 |
| TspGWI | ACGGA | 1 cut(s) | 311 |
| TspRI | CASTG | 3 cut(s) | 16, 536, 619 |
| Tth111I | GACNNNGTC | 1 cut(s) | 223 |
| Vha464I | CTTAAG | 1 cut(s) | 335 |
| VpaK11BI | GGWCC | 3 cut(s) | 51, 241, 974 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 719 |
| XbaI | TCTAGA | 1 cut(s) | 916 |
| XceI | RCATGY | 1 cut(s) | 772 |
| XhoI | CTCGAG | 1 cut(s) | 281 |
| XmnI | GAANNNNTTC | 2 cut(s) | 416, 1113 |
| XspI | CTAG | 1 cut(s) | 917 |