pycom06g12130

Floricaula leafy homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
17291368 .. 17293794
2427 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g12130.3

Sequence Viewer

Length: 1209 bp
ATGGATCCAGATGCCTTCTCTGCGAACTTGTTCAAGTGGGACTTACGTGGGATGGTTGTGCCGACGAACCGGGTTCAGCTCGAGGCAGCCGTGCCGCCAGCAGCGGCAGCTGCTGCGGGGGCGGTTGGTTATACTTTGCGGGCGCCAAGAGAGCTTGGACTTGGAGGGCTTGAAGACTTGTTCCAGGCTTATGGGGTCAGATACTACACGGCGGCGAAGATAGCAGAGCTTGGATTTACTGTGAACACCCTCTTGGACATGAAGGATGATGAGCTTGATGACATGACGAGCAGCGTCTCTCAGATATTCCACTGGGAGTTGATTGTTGGGGAGAGGTATGGTATCAAAGCTGCCGTCAGAGCCGAGCGCCGCCGCCTCGAGGAGGAGGACTCTCGGCGGCGCAACCCTGTCTCTGGTGATACCACCACCAATGCCCTAGATGCTCTCCCCCAAGAAGGACTGTCGGAGGAGCCAGTGCAACAAGAGAAGGAGATGGTGGGGAGCGGAGTAGGGATGGCGTGGGAGGTTGTGACGGCGGGGGAGAGGCGGAAGAAGCAGCGGAGGATGAAGAAGGGGCAATATAGGAACTGTAGTGCTGGAGGGGGTCATAATAATGATCATAACAAGGGTGTAGACGACAAGGACGACATGAATGGGCAGGGGAACGGTGGAGGAGGGGGGTTGCTAGGCGAGAGACAGAGGGAGCACCCGTTCATCGTGACGGAGCCTGGGGAGGTGGCACGTGGCAAAAAGAACGGTCTTGATTACCTCTTCCATCTCTACGAGCAGTGCCGTGATTTCTTGATCCAGGTCCAGAACATTGCGAAGGAGCGCGGTGAAAAATGTCCAACCAAGGTGTTTAGGTATGCCAAAAAGTCAGGCGCAAGCTACATCAACAAGCCGAAGATGCGGCACTATGTGCACTGCTACGCCCTGCATTGCCTGGACGTGGAGGCGTCGAATGTGCTGAGGAGAGCGTTCAAGGAGAGGGGCGAAAATGTTGGGGCATGGCGGCAGTCGTGTTACAAGCCTCTTGTGGTCATTGCAGCAGGCCAAGGCTGGGACATCGATGCCATTTTCAATTCTCATCCCCCTCTCTCCATCTGGTACGTTCCCACGAAGCTCCGTCAGCTTTGTCATGCCGAGCGCCACAATGCCACCGCCTCTAGCTCTGCCTCCGGTGGCGGGGGCGAGCACCTGCCCTATTGA

Protein Analysis

403

Amino Acids

44.58

Weight (kDa)

8.07

Isoelectric Point (pI)

41.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010043)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 377
AccB1I GGYRCC 1 cut(s) 142
AccBSI CCGCTC 1 cut(s) 504
AccI GTMKAC 1 cut(s) 633
AccII CGCG 1 cut(s) 834
AclWI GGATC 2 cut(s) 12, 799
AcvI CACGTG 1 cut(s) 743
AcyI GRCGYC 2 cut(s) 143, 956
AdeI CACNNNGTG 1 cut(s) 919
AfaI GTAC 1 cut(s) 1109
AfiI CCNNNNNNNGG 7 cut(s) 379, 382, 413, 455, 949, 1060, 1185
AgsI TTSAA 4 cut(s) 34, 173, 982, 1081
AjiI CACGTC 1 cut(s) 949
AjnI CCWGG 4 cut(s) 183, 727, 807, 942
AjuI GAANNNNNNNTTGG 2 cut(s) 236, 268
AloI GAACNNNNNNTCC 2 cut(s) 695, 727
Alw21I GWGCWC 3 cut(s) 708, 924, 1197
Alw26I GTCTC 3 cut(s) 301, 415, 688
Alw44I GTGCAC 1 cut(s) 920
AlwI GGATC 2 cut(s) 12, 799
AlwNI CAGNNNCTG 1 cut(s) 113
Ama87I CYCGRG 2 cut(s) 80, 377
AoxI GGCC 1 cut(s) 1051
ApaLI GTGCAC 1 cut(s) 920
ApeKI GCWGC 9 cut(s) 86, 101, 107, 110, 113, 291, 350, 556, 1046
ArsI GACNNNNNNTTYG 2 cut(s) 339, 371
Asp700I GAANNNNTTC 1 cut(s) 29
AspLEI GCGC 6 cut(s) 145, 369, 402, 834, 884, 1149
AspS9I GGNCC 1 cut(s) 811
AsuC2I CCSGG 1 cut(s) 71
AsuHPI GGTGA 2 cut(s) 428, 848
AvaI CYCGRG 2 cut(s) 80, 377
AvaII GGWCC 1 cut(s) 811
BaeGI GKGCMC 1 cut(s) 924
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 142
BbrPI CACGTG 1 cut(s) 743
BbsI GAAGAC 1 cut(s) 180
Bbv12I GWGCWC 3 cut(s) 708, 924, 1197
BbvCI CCTCAGC 1 cut(s) 968
BbvI GCAGC 9 cut(s) 97, 98, 100, 113, 119, 303, 337, 568, 1058
BccI CCATC 5 cut(s) 46, 487, 508, 783, 1109
BceAI ACGGC 5 cut(s) 74, 225, 338, 549, 777
BciT130I CCWGG 4 cut(s) 185, 729, 809, 944
BclI TGATCA 1 cut(s) 616
BcnI CCSGG 1 cut(s) 71
BcoDI GTCTC 3 cut(s) 301, 415, 688
BfaI CTAG 3 cut(s) 437, 686, 1167
BfmI CTRYAG 1 cut(s) 589
BfoI RGCGCY 3 cut(s) 146, 370, 1150
Bme1390I CCNGG 5 cut(s) 71, 185, 729, 809, 944
Bme18I GGWCC 1 cut(s) 811
BmeT110I CYCGRG 2 cut(s) 80, 377
BmgBI CACGTC 1 cut(s) 949
BmgT120I GGNCC 1 cut(s) 811
BmiI GGNNCC 4 cut(s) 6, 144, 471, 726
BmrFI CCNGG 5 cut(s) 71, 185, 729, 809, 944
BmrI ACTGGG 1 cut(s) 322
BmsI GCATC 3 cut(s) 430, 897, 1060
BmuI ACTGGG 1 cut(s) 322
BpiI GAAGAC 1 cut(s) 180
BplI GAGNNNNNCTC 2 cut(s) 374, 406
BpmI CTGGAG 1 cut(s) 618
Bpu10I CCTNAGC 1 cut(s) 968
BpuMI CCSGG 1 cut(s) 71
Bsa29I ATCGAT 1 cut(s) 1068
BsaAI YACGTR 2 cut(s) 47, 743
BsaHI GRCGYC 2 cut(s) 143, 956
BsaJI CCNNGG 3 cut(s) 728, 852, 1054
BsaWI WCCGGW 1 cut(s) 1178
BsaXI ACNNNNNCTCC 2 cut(s) 695, 725
Bsc4I CCNNNNNNNGG 7 cut(s) 379, 382, 413, 455, 949, 1060, 1185
Bse1I ACTGG 2 cut(s) 317, 473
Bse3DI GCAATG 3 cut(s) 819, 937, 1041
BseBI CCWGG 4 cut(s) 185, 729, 809, 944
BseCI ATCGAT 1 cut(s) 1068
BseDI CCNNGG 3 cut(s) 728, 852, 1054
BseGI GGATG 5 cut(s) 57, 271, 519, 570, 1087
BseLI CCNNNNNNNGG 7 cut(s) 379, 382, 413, 455, 949, 1060, 1185
BseMI GCAATG 3 cut(s) 819, 937, 1041
BseMII CTCAG 2 cut(s) 314, 959
BseNI ACTGG 2 cut(s) 317, 473
BseRI GAGGAG 5 cut(s) 395, 398, 482, 687, 985
BseSI GKGCMC 1 cut(s) 924
BseXI GCAGC 9 cut(s) 97, 98, 100, 113, 119, 303, 337, 568, 1058
BseYI CCCAGC 1 cut(s) 1059
Bsh1236I CGCG 1 cut(s) 834
BshFI GGCC 1 cut(s) 1053
BshNI GGYRCC 1 cut(s) 142
BshVI ATCGAT 1 cut(s) 1068
BsiHKAI GWGCWC 3 cut(s) 708, 924, 1197
BsiHKCI CYCGRG 2 cut(s) 80, 377
BsiSI CCGG 2 cut(s) 70, 1179
BslFI GGGAC 2 cut(s) 53, 1076
BslI CCNNNNNNNGG 7 cut(s) 379, 382, 413, 455, 949, 1060, 1185
BsmAI GTCTC 3 cut(s) 301, 415, 688
BsmBI CGTCTC 1 cut(s) 301
BsmFI GGGAC 2 cut(s) 53, 1076
BsnI GGCC 1 cut(s) 1053
BsoBI CYCGRG 2 cut(s) 80, 377
Bsp1286I GDGCHC 3 cut(s) 708, 924, 1197
Bsp143I GATC 3 cut(s) 4, 616, 804
BspANI GGCC 1 cut(s) 1053
BspCNI CTCAG 2 cut(s) 313, 960
BspDI ATCGAT 1 cut(s) 1068
BspFNI CGCG 1 cut(s) 834
BspLI GGNNCC 4 cut(s) 6, 144, 471, 726
BspPI GGATC 2 cut(s) 12, 799
BspT107I GGYRCC 1 cut(s) 142
BsrBI CCGCTC 1 cut(s) 504
BsrDI GCAATG 3 cut(s) 819, 937, 1041
BsrI ACTGG 2 cut(s) 317, 473
BssECI CCNNGG 3 cut(s) 728, 852, 1054
BssMI GATC 3 cut(s) 4, 616, 804
BssNI GRCGYC 2 cut(s) 143, 956
BssT1I CCWWGG 2 cut(s) 852, 1054
Bst2UI CCWGG 4 cut(s) 185, 729, 809, 944
Bst4CI ACNGT 5 cut(s) 241, 462, 590, 668, 758
Bst6I CTCTTC 1 cut(s) 776
BstACI GRCGYC 2 cut(s) 143, 956
BstAPI GCANNNNNTGC 2 cut(s) 113, 919
BstBAI YACGTR 2 cut(s) 47, 743
BstC8I GCNNGC 5 cut(s) 99, 141, 886, 1051, 1193
BstDEI CTNAG 2 cut(s) 300, 968
BstENI CCTNNNNNAGG 1 cut(s) 380
BstF5I GGATG 5 cut(s) 57, 271, 519, 570, 1087
BstFNI CGCG 1 cut(s) 834
BstH2I RGCGCY 3 cut(s) 146, 370, 1150
BstHHI GCGC 6 cut(s) 145, 369, 402, 834, 884, 1149
BstKTI GATC 3 cut(s) 7, 619, 807
BstMAI GTCTC 3 cut(s) 301, 415, 688
BstMBI GATC 3 cut(s) 4, 616, 804
BstNI CCWGG 4 cut(s) 185, 729, 809, 944
BstSCI CCNGG 5 cut(s) 69, 183, 727, 807, 942
BstSFI CTRYAG 1 cut(s) 589
BstSLI GKGCMC 1 cut(s) 924
BstUI CGCG 1 cut(s) 834
BstV1I GCAGC 9 cut(s) 97, 98, 100, 113, 119, 303, 337, 568, 1058
BstV2I GAAGAC 1 cut(s) 180
BstX2I RGATCY 1 cut(s) 4
BstXI CCANNNNNNTGG 1 cut(s) 191
BstYI RGATCY 1 cut(s) 4
Bsu15I ATCGAT 1 cut(s) 1068
BsuRI GGCC 1 cut(s) 1053
BsuTUI ATCGAT 1 cut(s) 1068
BtrI CACGTC 1 cut(s) 949
BtsCI GGATG 5 cut(s) 57, 271, 519, 570, 1087
BtsI GCAGTG 2 cut(s) 794, 922
BtsIMutI CAGTG 4 cut(s) 310, 480, 794, 922
Cac8I GCNNGC 5 cut(s) 99, 141, 886, 1051, 1193
CaiI CAGNNNCTG 1 cut(s) 113
CfoI GCGC 6 cut(s) 145, 369, 402, 834, 884, 1149
Cfr13I GGNCC 1 cut(s) 811
ClaI ATCGAT 1 cut(s) 1068
CseI GACGC 2 cut(s) 283, 945
Csp6I GTAC 1 cut(s) 1108
CviAII CATG 5 cut(s) 259, 283, 649, 1008, 1139
CviQI GTAC 1 cut(s) 1108
DdeI CTNAG 2 cut(s) 300, 968
DinI GGCGCC 1 cut(s) 144
DpnI GATC 3 cut(s) 6, 618, 806
DpnII GATC 3 cut(s) 4, 616, 804
DraIII CACNNNGTG 1 cut(s) 919
Eam1104I CTCTTC 1 cut(s) 776
EarI CTCTTC 1 cut(s) 776
EciI GGCGGA 1 cut(s) 562
Eco130I CCWWGG 2 cut(s) 852, 1054
Eco47I GGWCC 1 cut(s) 811
Eco72I CACGTG 1 cut(s) 743
Eco88I CYCGRG 2 cut(s) 80, 377
EcoNI CCTNNNNNAGG 1 cut(s) 380
EcoRII CCWGG 4 cut(s) 183, 727, 807, 942
EcoT14I CCWWGG 2 cut(s) 852, 1054
EgeI GGCGCC 1 cut(s) 144
EheI GGCGCC 1 cut(s) 144
ErhI CCWWGG 2 cut(s) 852, 1054
Esp3I CGTCTC 1 cut(s) 301
FaeI CATG 5 cut(s) 262, 286, 652, 1011, 1142
FalI AAGNNNNNCTT 2 cut(s) 26, 58
FaqI GGGAC 2 cut(s) 53, 1076
FatI CATG 5 cut(s) 258, 282, 648, 1007, 1138
FauI CCCGC 4 cut(s) 109, 132, 529, 1178
FbaI TGATCA 1 cut(s) 616
FblI GTMKAC 1 cut(s) 633
FokI GGATG 5 cut(s) 64, 278, 526, 577, 1074
FspBI CTAG 3 cut(s) 437, 686, 1167
GlaI GCGC 6 cut(s) 144, 368, 401, 833, 883, 1148
GsaI CCCAGC 1 cut(s) 1063
GsuI CTGGAG 1 cut(s) 618
HaeII RGCGCY 3 cut(s) 146, 370, 1150
HaeIII GGCC 1 cut(s) 1053
HapII CCGG 2 cut(s) 70, 1179
HgaI GACGC 2 cut(s) 283, 945
HhaI GCGC 6 cut(s) 145, 369, 402, 834, 884, 1149
Hin1I GRCGYC 2 cut(s) 143, 956
Hin1II CATG 5 cut(s) 262, 286, 652, 1011, 1142
Hin6I GCGC 6 cut(s) 143, 367, 400, 832, 882, 1147
HinP1I GCGC 6 cut(s) 143, 367, 400, 832, 882, 1147
HinfI GANTC 1 cut(s) 389
HpaII CCGG 2 cut(s) 70, 1179
HphI GGTGA 2 cut(s) 428, 848
Hpy166II GTNNAC 3 cut(s) 244, 634, 922
Hpy188I TCNGA 4 cut(s) 200, 303, 359, 466
Hpy188III TCNNGA 5 cut(s) 8, 718, 761, 802, 814
Hpy8I GTNNAC 3 cut(s) 244, 634, 922
Hpy99I CGWCG 2 cut(s) 67, 961
HpyAV CCTTC 6 cut(s) 25, 256, 449, 481, 565, 820
HpyCH4III ACNGT 5 cut(s) 241, 462, 590, 668, 758
HpyCH4IV ACGT 4 cut(s) 46, 742, 948, 1110
HpyCH4V TGCA 4 cut(s) 478, 922, 937, 1046
HpyF3I CTNAG 2 cut(s) 300, 968
HpySE526I ACGT 4 cut(s) 46, 742, 948, 1110
Hsp92I GRCGYC 2 cut(s) 143, 956
Hsp92II CATG 5 cut(s) 262, 286, 652, 1011, 1142
HspAI GCGC 6 cut(s) 143, 367, 400, 832, 882, 1147
KasI GGCGCC 1 cut(s) 142
Ksp22I TGATCA 1 cut(s) 616
Kzo9I GATC 3 cut(s) 4, 616, 804
LmnI GCTCC 6 cut(s) 469, 501, 703, 724, 829, 1128
Lsp1109I GCAGC 9 cut(s) 97, 98, 100, 113, 119, 303, 337, 568, 1058
LweI GCATC 3 cut(s) 430, 897, 1060
MaeI CTAG 3 cut(s) 437, 686, 1167
MaeII ACGT 4 cut(s) 46, 742, 948, 1110
MaeIII GTNAC 3 cut(s) 529, 718, 1022
MalI GATC 3 cut(s) 6, 618, 806
MbiI CCGCTC 1 cut(s) 504
MboI GATC 3 cut(s) 4, 616, 804
MboII GAAGA 6 cut(s) 185, 229, 562, 580, 763, 916
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 3 cut(s) 708, 924, 1197
MluCI AATT 1 cut(s) 1081
Mly113I GGCGCC 1 cut(s) 143
MlyI GAGTC 1 cut(s) 383
MmeI TCCRAC 2 cut(s) 444, 872
MroXI GAANNNNTTC 1 cut(s) 29
MslI CAYNNNNRTG 1 cut(s) 612
MspA1I CMGCKG 3 cut(s) 104, 110, 559
MspI CCGG 2 cut(s) 70, 1179
MspR9I CCNGG 5 cut(s) 71, 185, 729, 809, 944
MvaI CCWGG 4 cut(s) 185, 729, 809, 944
MvnI CGCG 1 cut(s) 834
NarI GGCGCC 1 cut(s) 143
NciI CCSGG 1 cut(s) 71
NdeII GATC 3 cut(s) 4, 616, 804
NlaIII CATG 5 cut(s) 262, 286, 652, 1011, 1142
NlaIV GGNNCC 4 cut(s) 6, 144, 471, 726
NmeAIII GCCGAG 3 cut(s) 373, 388, 1168
NmuCI GTSAC 2 cut(s) 529, 718
PaeR7I CTCGAG 2 cut(s) 80, 377
PcsI WCGNNNNNNNCGW 2 cut(s) 87, 642
PdmI GAANNNNTTC 1 cut(s) 29
PleI GAGTC 1 cut(s) 383
PluTI GGCGCC 1 cut(s) 146
PmaCI CACGTG 1 cut(s) 743
PmlI CACGTG 1 cut(s) 743
PpsI GAGTC 1 cut(s) 383
Ppu21I YACGTR 2 cut(s) 47, 743
Psp6I CCWGG 4 cut(s) 183, 727, 807, 942
PspCI CACGTG 1 cut(s) 743
PspFI CCCAGC 1 cut(s) 1059
PspGI CCWGG 4 cut(s) 183, 727, 807, 942
PspN4I GGNNCC 4 cut(s) 6, 144, 471, 726
PspPI GGNCC 1 cut(s) 811
PspXI VCTCGAGB 2 cut(s) 80, 377
PstNI CAGNNNCTG 1 cut(s) 113
PsuI RGATCY 1 cut(s) 4
PvuII CAGCTG 1 cut(s) 110
RsaI GTAC 1 cut(s) 1109
RsaNI GTAC 1 cut(s) 1108
RseI CAYNNNNRTG 1 cut(s) 612
Sau3AI GATC 3 cut(s) 4, 616, 804
Sau96I GGNCC 1 cut(s) 811
SchI GAGTC 1 cut(s) 383
ScrFI CCNGG 5 cut(s) 71, 185, 729, 809, 944
SduI GDGCHC 3 cut(s) 708, 924, 1197
SfaNI GCATC 3 cut(s) 430, 897, 1060
SfcI CTRYAG 1 cut(s) 589
SfoI GGCGCC 1 cut(s) 144
Sfr274I CTCGAG 2 cut(s) 80, 377
SinI GGWCC 1 cut(s) 811
SlaI CTCGAG 2 cut(s) 80, 377
SmiMI CAYNNNNRTG 1 cut(s) 612
SmlI CTYRAG 2 cut(s) 80, 377
SmoI CTYRAG 2 cut(s) 80, 377
Sse9I AATT 1 cut(s) 1081
SspDI GGCGCC 1 cut(s) 142
SspMI CTAG 3 cut(s) 437, 686, 1167
StyD4I CCNGG 5 cut(s) 69, 183, 727, 807, 942
StyI CCWWGG 2 cut(s) 852, 1054
TaaI ACNGT 5 cut(s) 241, 462, 590, 668, 758
TaiI ACGT 4 cut(s) 49, 745, 951, 1113
TaqI TCGA 4 cut(s) 81, 378, 959, 1068
TasI AATT 1 cut(s) 1081
TauI GCSGC 8 cut(s) 97, 107, 215, 372, 375, 400, 913, 1015
TscAI CASTG 4 cut(s) 317, 480, 794, 929
TseFI GTSAC 2 cut(s) 529, 718
TseI GCWGC 9 cut(s) 86, 101, 107, 110, 113, 291, 350, 556, 1046
Tsp45I GTSAC 2 cut(s) 529, 718
TspDTI ATGAA 4 cut(s) 275, 581, 665, 703
TspGWI ACGGA 2 cut(s) 737, 1115
TspRI CASTG 4 cut(s) 317, 480, 794, 929
VneI GTGCAC 1 cut(s) 920
VpaK11BI GGWCC 1 cut(s) 811
XagI CCTNNNNNAGG 1 cut(s) 380
XhoI CTCGAG 2 cut(s) 80, 377
XmiI GTMKAC 1 cut(s) 633
XmnI GAANNNNTTC 1 cut(s) 29
XspI CTAG 3 cut(s) 437, 686, 1167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.