Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0010043

Physical Location & Seq

Genomic Coordinates Forward (+)

8212345 .. 8214436

Gene Structure 2092 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG098400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGTTCAAATGGGACCTACGAGGCATGGCGGTTCCGCCGAGCCGGGTTCAGCTCGAGGCGGCGGCAGTAGCGCCACAACAAGCTGCGGCTGCGGCCGCTGCCGCAGCCGCGGGTTACTCGGTGCGGGGGCCGAGGGAGGTTGTGGGGCTGGAGGACATGTTCCGGGCGTACGGAGTGAGGTACTACACAGCGGCGAGGATAGCGGACCTAGGGTTCACTGTGAGCACGCTTTTGGACATGAAAGATGAGGAGCTTGACGACATGATGAACAGCGTATCTCAGTTTTTCCGGGTGGAGCTACTCGTCGGTGAGAGGTACGGCATTAAGGCCGCCATCAGAGCCGAGAGGAGACGCCTTGAGGAAGAGGACTCGCGGAGGCGCCACTCTCTCTCCGGCGACACCAACGCTATGGATGCTCTCTCTCAAGAAGGGCTGTCGGAGGAGCCGGTGCAACAAGAGAAGGAGATGGTGGGGAGCGGCGGTGGAGCCGCGTGGGAAGTGGTTACGGCGGCGGAGAAGCGGAAGAAGCTTCGGAGGATTAGGAGAGGAGTAGGAGGGCATAGGAGTAGTAACGAGGGGGTTGATGATGATGAGGAGGAGGAAGAGAATGAGGACGGCATTAATGGTGGAGGAGGGGAGCACCCGAATAGGGCATTAGCAATGAGGGGTGGTGGGAGAGAGAGACAGAGGGAGCACCCGTTCATCGTAACTGAGGCTGGGGAGGTGGCACGTGGCAAAAAGAACGGACTGGATTACCTCTTTCATCTGTATGAGCAGTGCCATGAGTTTTTGACCCAGGTCCAGAACATTGCCAAGCAGCGCGGTGAAAAATGTCCCACCAAGGTGACAAACCAGGTGTTTAGGTATGCGAAAAAGGAGGGAGCAAACTACATCAATAAGCCCAAAATGCGACACTATGTTCACTGCTATGCGCTGCATTGCCTGGACGAGGAGGGTTCGAATGCGCTGAGGAGAGAGTGCAAACTGCGAGGCGAGAACATTGGGGCGTGGAGGCAGGCGTGTTACAGGCCTGTTGTGGAAATAGCTGCAGGCCAAGGCTGGGACATTGATGCCATTTTCAGTGCACATCCTCAGCTATCTGTTTGGTATGTTCCTACCAAACTTCGGCAGCTTTGTCACGCTGAGCGCAACAATGCCACCGCCTCTAGCTCCGCCTCAGGTGGTAGTGGTACAGCTGATCACCTGCCTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010022 GO:0010033 GO:0010073 GO:0010074 GO:0010077 GO:0010468 GO:0010476 GO:0010556 GO:0010582 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0023052 GO:0031323 GO:0031326 GO:0031490 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044424 GO:0044464 GO:0046983 GO:0048367 GO:0048507 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0080090 GO:0090567 GO:0097159 GO:0098727 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C_LFY_FLO LFY_SAM

Protein Analysis

404

Amino Acids

44.9

Weight (kDa)

6.49

Isoelectric Point (pI)

49.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAM_LFY	PF01698	46 - 123	2.1e-39	Floricaula / Leafy protein SAM domain
C_LFY_FLO	PF17538	223 - 387	2.1e-100	DNA Binding Domain (C-terminal) Leafy/Floricaula

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010043)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61850 AT5G61850
fragaria_vesca	FvH4_3g03530 FvH4_3g04170 FvH4_3g04170 FvH4_5g09660
malus_domestica	MD06G1129500.v1.1 MD14G1146700.v1.1
prunus_persica	Prupe.5G140700_v2.0.a1
pyrus_communis	pycom06g12130 pycom14g12130
rosa_chinensis	RchiOBHm_Chr7g0188591
rosa_laevigata	RLG00000004681
rosa_multiflora	Rmu_sc0001576.1_g000018
rosa_roxburghii	Rroxscaffold_3G00266230
rosa_rugosa	Rorug06G0491500
rosa_samantha	Rh7AG096400 Rh7BG098300 Rh7CG099200 Rh7DG098400
rosa_wichuraiana	Rw7G008330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	378
AccBSI	CCGCTC	1 cut(s)	477
AccII	CGCG	4 cut(s)	110, 373, 491, 822
AcoI	YGGCCR	1 cut(s)	93
AcvI	CACGTG	1 cut(s)	731
AcyI	GRCGYC	2 cut(s)	352, 379
AfaI	GTAC	4 cut(s)	170, 182, 317, 1192
AfiI	CCNNNNNNNGG	4 cut(s)	649, 949, 1060, 1125
AflIII	ACRYGT	1 cut(s)	156
AgsI	TTSAA	1 cut(s)	7
AjnI	CCWGG	3 cut(s)	795, 852, 942
AleI	CACNNNNGTG	1 cut(s)	842
AloI	GAACNNNNNNTCC	6 cut(s)	143, 175, 197, 229, 683, 715
Alw21I	GWGCWC	4 cut(s)	227, 642, 696, 1087
Alw26I	GTCTC	2 cut(s)	343, 676
Alw44I	GTGCAC	1 cut(s)	1083
Ama87I	CYCGRG	1 cut(s)	53
AoxI	GGCC	5 cut(s)	93, 128, 327, 1028, 1051
ApaLI	GTGCAC	1 cut(s)	1083
ApeKI	GCWGC	8 cut(s)	83, 89, 98, 104, 817, 934, 1046, 1129
AseI	ATTAAT	1 cut(s)	621
AspA2I	CCTAGG	1 cut(s)	208
AspLEI	GCGC	6 cut(s)	73, 381, 822, 934, 967, 1149
AspS9I	GGNCC	4 cut(s)	13, 128, 205, 799
AsuC2I	CCSGG	3 cut(s)	44, 164, 290
AsuHPI	GGTGA	4 cut(s)	320, 836, 856, 1193
AsuII	TTCGAA	1 cut(s)	959
AvaI	CYCGRG	1 cut(s)	53
AvaII	GGWCC	3 cut(s)	13, 205, 799
AvrII	CCTAGG	1 cut(s)	208
AxyI	CCTNAGG	1 cut(s)	1177
BaeGI	GKGCMC	1 cut(s)	1087
BanI	GGYRCC	1 cut(s)	378
BbrPI	CACGTG	1 cut(s)	731
Bbv12I	GWGCWC	4 cut(s)	227, 642, 696, 1087
BbvCI	CCTCAGC	2 cut(s)	968, 1092
BbvI	GCAGC	8 cut(s)	70, 76, 85, 116, 829, 921, 1033, 1141
BccI	CCATC	2 cut(s)	341, 460
BceAI	ACGGC	3 cut(s)	334, 522, 631
BciT130I	CCWGG	3 cut(s)	797, 854, 944
BclI	TGATCA	1 cut(s)	1198
BcnI	CCSGG	3 cut(s)	44, 164, 290
BcoDI	GTCTC	2 cut(s)	343, 676
BfaI	CTAG	2 cut(s)	209, 1167
BfmI	CTRYAG	1 cut(s)	1047
BfoI	RGCGCY	2 cut(s)	74, 382
BlnI	CCTAGG	1 cut(s)	208
BlpI	GCTNAGC	1 cut(s)	1143
Bme1390I	CCNGG	6 cut(s)	44, 164, 290, 797, 854, 944
Bme18I	GGWCC	3 cut(s)	13, 205, 799
BmeT110I	CYCGRG	1 cut(s)	53
BmgT120I	GGNCC	4 cut(s)	13, 128, 205, 799
BmiI	GGNNCC	6 cut(s)	14, 33, 129, 380, 444, 487
BmrFI	CCNGG	6 cut(s)	44, 164, 290, 797, 854, 944
BmsI	GCATC	2 cut(s)	403, 1060
BoxI	GACNNNNGTC	1 cut(s)	797
BpmI	CTGGAG	1 cut(s)	170
Bpu10I	CCTNAGC	2 cut(s)	968, 1092
Bpu1102I	GCTNAGC	1 cut(s)	1143
Bpu14I	TTCGAA	1 cut(s)	959
BpuEI	CTTGAG	2 cut(s)	377, 408
BpuMI	CCSGG	3 cut(s)	44, 164, 290
BsaAI	YACGTR	1 cut(s)	731
BsaHI	GRCGYC	2 cut(s)	352, 379
BsaJI	CCNNGG	6 cut(s)	108, 131, 208, 795, 840, 1054
BsaXI	ACNNNNNCTCC	8 cut(s)	143, 173, 374, 404, 466, 496, 683, 713
Bsc4I	CCNNNNNNNGG	4 cut(s)	649, 949, 1060, 1125
Bse118I	RCCGGY	1 cut(s)	445
Bse1I	ACTGG	1 cut(s)	753
Bse21I	CCTNAGG	1 cut(s)	1177
Bse3DI	GCAATG	3 cut(s)	666, 807, 937
BseBI	CCWGG	3 cut(s)	797, 854, 944
BseDI	CCNNGG	6 cut(s)	108, 131, 208, 795, 840, 1054
BseGI	GGATG	2 cut(s)	418, 1087
BseLI	CCNNNNNNNGG	4 cut(s)	649, 949, 1060, 1125
BseMI	GCAATG	3 cut(s)	666, 807, 937
BseMII	CTCAG	6 cut(s)	293, 702, 959, 1106, 1134, 1191
BseNI	ACTGG	1 cut(s)	753
BseRI	GAGGAG	9 cut(s)	263, 361, 455, 561, 608, 611, 645, 965, 985
BseSI	GKGCMC	1 cut(s)	1087
BseX3I	CGGCCG	1 cut(s)	93
BseXI	GCAGC	8 cut(s)	70, 76, 85, 116, 829, 921, 1033, 1141
BseYI	CCCAGC	2 cut(s)	716, 1059
Bsh1236I	CGCG	4 cut(s)	110, 373, 491, 822
Bsh1285I	CGRYCG	1 cut(s)	96
BshFI	GGCC	5 cut(s)	95, 130, 329, 1030, 1053
BshNI	GGYRCC	1 cut(s)	378
BsiEI	CGRYCG	1 cut(s)	96
BsiHKAI	GWGCWC	4 cut(s)	227, 642, 696, 1087
BsiHKCI	CYCGRG	1 cut(s)	53
BsiSI	CCGG	5 cut(s)	43, 163, 289, 393, 446
BsiWI	CGTACG	1 cut(s)	168
BslFI	GGGAC	3 cut(s)	26, 819, 1076
BslI	CCNNNNNNNGG	4 cut(s)	649, 949, 1060, 1125
BsmAI	GTCTC	2 cut(s)	343, 676
BsmBI	CGTCTC	1 cut(s)	343
BsmFI	GGGAC	3 cut(s)	26, 819, 1076
BsmI	GAATGC	1 cut(s)	967
BsnI	GGCC	5 cut(s)	95, 130, 329, 1030, 1053
BsoBI	CYCGRG	1 cut(s)	53
Bsp119I	TTCGAA	1 cut(s)	959
Bsp1286I	GDGCHC	4 cut(s)	227, 642, 696, 1087
Bsp143I	GATC	1 cut(s)	1198
Bsp1720I	GCTNAGC	1 cut(s)	1143
BspANI	GGCC	5 cut(s)	95, 130, 329, 1030, 1053
BspCNI	CTCAG	6 cut(s)	292, 703, 960, 1105, 1135, 1190
BspFNI	CGCG	4 cut(s)	110, 373, 491, 822
BspLI	GGNNCC	6 cut(s)	14, 33, 129, 380, 444, 487
BspMAI	CTGCAG	1 cut(s)	1051
BspT104I	TTCGAA	1 cut(s)	959
BspT107I	GGYRCC	1 cut(s)	378
BsrBI	CCGCTC	1 cut(s)	477
BsrDI	GCAATG	3 cut(s)	666, 807, 937
BsrFI	RCCGGY	1 cut(s)	445
BsrI	ACTGG	1 cut(s)	753
BssAI	RCCGGY	1 cut(s)	445
BssECI	CCNNGG	6 cut(s)	108, 131, 208, 795, 840, 1054
BssMI	GATC	1 cut(s)	1198
BssNI	GRCGYC	2 cut(s)	352, 379
BssT1I	CCWWGG	3 cut(s)	208, 840, 1054
Bst2UI	CCWGG	3 cut(s)	797, 854, 944
Bst4CI	ACNGT	1 cut(s)	220
Bst6I	CTCTTC	2 cut(s)	357, 597
BstACI	GRCGYC	2 cut(s)	352, 379
BstBAI	YACGTR	1 cut(s)	731
BstBI	TTCGAA	1 cut(s)	959
BstC8I	GCNNGC	3 cut(s)	227, 1017, 1051
BstDEI	CTNAG	6 cut(s)	279, 711, 968, 1092, 1143, 1177
BstDSI	CCRYGG	1 cut(s)	108
BstENI	CCTNNNNNAGG	1 cut(s)	947
BstF5I	GGATG	2 cut(s)	418, 1087
BstFNI	CGCG	4 cut(s)	110, 373, 491, 822
BstH2I	RGCGCY	2 cut(s)	74, 382
BstHHI	GCGC	6 cut(s)	73, 381, 822, 934, 967, 1149
BstKTI	GATC	1 cut(s)	1201
BstMAI	GTCTC	2 cut(s)	343, 676
BstMBI	GATC	1 cut(s)	1198
BstMCI	CGRYCG	1 cut(s)	96
BstNI	CCWGG	3 cut(s)	797, 854, 944
BstNSI	RCATGY	1 cut(s)	160
BstPAI	GACNNNNGTC	1 cut(s)	797
BstSCI	CCNGG	6 cut(s)	42, 162, 288, 795, 852, 942
BstSFI	CTRYAG	1 cut(s)	1047
BstSLI	GKGCMC	1 cut(s)	1087
BstUI	CGCG	4 cut(s)	110, 373, 491, 822
BstV1I	GCAGC	8 cut(s)	70, 76, 85, 116, 829, 921, 1033, 1141
BstXI	CCANNNNNNTGG	1 cut(s)	409
BstZI	CGGCCG	1 cut(s)	93
Bsu36I	CCTNAGG	1 cut(s)	1177
BsuRI	GGCC	5 cut(s)	95, 130, 329, 1030, 1053
BtgI	CCRYGG	1 cut(s)	108
BtsCI	GGATG	2 cut(s)	418, 1087
BtsI	GCAGTG	2 cut(s)	782, 922
BtsIMutI	CAGTG	4 cut(s)	216, 782, 922, 1087
Cac8I	GCNNGC	3 cut(s)	227, 1017, 1051
CciNI	GCGGCCGC	1 cut(s)	93
CfoI	GCGC	6 cut(s)	73, 381, 822, 934, 967, 1149
Cfr10I	RCCGGY	1 cut(s)	445
Cfr13I	GGNCC	4 cut(s)	13, 128, 205, 799
Cfr42I	CCGCGG	1 cut(s)	111
CseI	GACGC	1 cut(s)	360
CsiI	ACCWGGT	1 cut(s)	852
Csp6I	GTAC	4 cut(s)	169, 181, 316, 1191
CviAII	CATG	5 cut(s)	25, 157, 238, 262, 782
CviQI	GTAC	4 cut(s)	169, 181, 316, 1191
DdeI	CTNAG	6 cut(s)	279, 711, 968, 1092, 1143, 1177
DinI	GGCGCC	1 cut(s)	380
DpnI	GATC	1 cut(s)	1200
DpnII	GATC	1 cut(s)	1198
EaeI	YGGCCR	1 cut(s)	93
EagI	CGGCCG	1 cut(s)	93
Eam1104I	CTCTTC	2 cut(s)	357, 597
EarI	CTCTTC	2 cut(s)	357, 597
EciI	GGCGGA	3 cut(s)	24, 527, 1162
EclXI	CGGCCG	1 cut(s)	93
Eco130I	CCWWGG	3 cut(s)	208, 840, 1054
Eco147I	AGGCCT	1 cut(s)	1030
Eco47I	GGWCC	3 cut(s)	13, 205, 799
Eco52I	CGGCCG	1 cut(s)	93
Eco72I	CACGTG	1 cut(s)	731
Eco81I	CCTNAGG	1 cut(s)	1177
Eco88I	CYCGRG	1 cut(s)	53
EcoNI	CCTNNNNNAGG	1 cut(s)	947
EcoO109I	RGGNCCY	1 cut(s)	13
EcoRII	CCWGG	3 cut(s)	795, 852, 942
EcoT14I	CCWWGG	3 cut(s)	208, 840, 1054
EgeI	GGCGCC	1 cut(s)	380
EheI	GGCGCC	1 cut(s)	380
ErhI	CCWWGG	3 cut(s)	208, 840, 1054
Esp3I	CGTCTC	1 cut(s)	343
FaeI	CATG	5 cut(s)	28, 160, 241, 265, 785
FaqI	GGGAC	3 cut(s)	26, 819, 1076
FatI	CATG	5 cut(s)	24, 156, 237, 261, 781
FauI	CCCGC	2 cut(s)	103, 117
FbaI	TGATCA	1 cut(s)	1198
FokI	GGATG	2 cut(s)	425, 1074
FspBI	CTAG	2 cut(s)	209, 1167
GlaI	GCGC	6 cut(s)	72, 380, 821, 933, 966, 1148
GsaI	CCCAGC	2 cut(s)	720, 1063
GsuI	CTGGAG	1 cut(s)	170
HaeII	RGCGCY	2 cut(s)	74, 382
HaeIII	GGCC	5 cut(s)	95, 130, 329, 1030, 1053
HapII	CCGG	5 cut(s)	43, 163, 289, 393, 446
HgaI	GACGC	1 cut(s)	360
HhaI	GCGC	6 cut(s)	73, 381, 822, 934, 967, 1149
Hin1I	GRCGYC	2 cut(s)	352, 379
Hin1II	CATG	5 cut(s)	28, 160, 241, 265, 785
Hin6I	GCGC	6 cut(s)	71, 379, 820, 932, 965, 1147
HinP1I	GCGC	6 cut(s)	71, 379, 820, 932, 965, 1147
HindIII	AAGCTT	1 cut(s)	527
HinfI	GANTC	1 cut(s)	368
HpaII	CCGG	5 cut(s)	43, 163, 289, 393, 446
HphI	GGTGA	4 cut(s)	320, 836, 856, 1193
Hpy166II	GTNNAC	3 cut(s)	216, 922, 1085
Hpy188I	TCNGA	3 cut(s)	338, 439, 534
Hpy188III	TCNNGA	2 cut(s)	425, 802
Hpy8I	GTNNAC	3 cut(s)	216, 922, 1085
Hpy99I	CGWCG	1 cut(s)	308
HpyAV	CCTTC	2 cut(s)	422, 454
HpyCH4III	ACNGT	1 cut(s)	220
HpyCH4IV	ACGT	1 cut(s)	730
HpyCH4V	TGCA	5 cut(s)	451, 937, 981, 1049, 1085
HpyF3I	CTNAG	6 cut(s)	279, 711, 968, 1092, 1143, 1177
HpySE526I	ACGT	1 cut(s)	730
Hsp92I	GRCGYC	2 cut(s)	352, 379
Hsp92II	CATG	5 cut(s)	28, 160, 241, 265, 785
HspAI	GCGC	6 cut(s)	71, 379, 820, 932, 965, 1147
KasI	GGCGCC	1 cut(s)	378
Ksp22I	TGATCA	1 cut(s)	1198
KspI	CCGCGG	1 cut(s)	111
Kzo9I	GATC	1 cut(s)	1198
LmnI	GCTCC	9 cut(s)	250, 295, 442, 474, 485, 637, 691, 881, 1175
Lsp1109I	GCAGC	8 cut(s)	70, 76, 85, 116, 829, 921, 1033, 1141
LweI	GCATC	2 cut(s)	403, 1060
MabI	ACCWGGT	1 cut(s)	852
MaeI	CTAG	2 cut(s)	209, 1167
MaeII	ACGT	1 cut(s)	730
MaeIII	GTNAC	7 cut(s)	113, 502, 569, 706, 844, 1022, 1136
MalI	GATC	1 cut(s)	1200
MbiI	CCGCTC	1 cut(s)	477
MboI	GATC	1 cut(s)	1198
MboII	GAAGA	3 cut(s)	374, 535, 614
MhlI	GDGCHC	4 cut(s)	227, 642, 696, 1087
Mly113I	GGCGCC	1 cut(s)	379
MlyI	GAGTC	1 cut(s)	362
MmeI	TCCRAC	1 cut(s)	417
MseI	TTAA	2 cut(s)	324, 621
MslI	CAYNNNNRTG	3 cut(s)	768, 842, 927
MspA1I	CMGCKG	4 cut(s)	98, 110, 191, 1196
MspI	CCGG	5 cut(s)	43, 163, 289, 393, 446
MspR9I	CCNGG	6 cut(s)	44, 164, 290, 797, 854, 944
Mva1269I	GAATGC	1 cut(s)	967
MvaI	CCWGG	3 cut(s)	797, 854, 944
MvnI	CGCG	4 cut(s)	110, 373, 491, 822
NarI	GGCGCC	1 cut(s)	379
NciI	CCSGG	3 cut(s)	44, 164, 290
NdeII	GATC	1 cut(s)	1198
NlaIII	CATG	5 cut(s)	28, 160, 241, 265, 785
NlaIV	GGNNCC	6 cut(s)	14, 33, 129, 380, 444, 487
NmeAIII	GCCGAG	3 cut(s)	63, 156, 367
NmuCI	GTSAC	2 cut(s)	844, 1136
NotI	GCGGCCGC	1 cut(s)	93
NspI	RCATGY	1 cut(s)	160
NspV	TTCGAA	1 cut(s)	959
OliI	CACNNNNGTG	1 cut(s)	842
PaeR7I	CTCGAG	1 cut(s)	53
PceI	AGGCCT	1 cut(s)	1030
PciI	ACATGT	1 cut(s)	156
PctI	GAATGC	1 cut(s)	967
Pfl23II	CGTACG	1 cut(s)	168
PleI	GAGTC	1 cut(s)	362
PluTI	GGCGCC	1 cut(s)	382
PmaCI	CACGTG	1 cut(s)	731
PmlI	CACGTG	1 cut(s)	731
PpsI	GAGTC	1 cut(s)	362
Ppu21I	YACGTR	1 cut(s)	731
PpuMI	RGGWCCY	1 cut(s)	13
PscI	ACATGT	1 cut(s)	156
PshAI	GACNNNNGTC	1 cut(s)	797
PshBI	ATTAAT	1 cut(s)	621
Psp5II	RGGWCCY	1 cut(s)	13
Psp6I	CCWGG	3 cut(s)	795, 852, 942
PspCI	CACGTG	1 cut(s)	731
PspFI	CCCAGC	2 cut(s)	716, 1059
PspGI	CCWGG	3 cut(s)	795, 852, 942
PspLI	CGTACG	1 cut(s)	168
PspN4I	GGNNCC	6 cut(s)	14, 33, 129, 380, 444, 487
PspPI	GGNCC	4 cut(s)	13, 128, 205, 799
PspPPI	RGGWCCY	1 cut(s)	13
PspXI	VCTCGAGB	1 cut(s)	53
PstI	CTGCAG	1 cut(s)	1051
PvuII	CAGCTG	1 cut(s)	1196
RsaI	GTAC	4 cut(s)	170, 182, 317, 1192
RsaNI	GTAC	4 cut(s)	169, 181, 316, 1191
RseI	CAYNNNNRTG	3 cut(s)	768, 842, 927
SacII	CCGCGG	1 cut(s)	111
SaqAI	TTAA	2 cut(s)	324, 621
Sau3AI	GATC	1 cut(s)	1198
Sau96I	GGNCC	4 cut(s)	13, 128, 205, 799
SchI	GAGTC	1 cut(s)	362
ScrFI	CCNGG	6 cut(s)	44, 164, 290, 797, 854, 944
SduI	GDGCHC	4 cut(s)	227, 642, 696, 1087
SexAI	ACCWGGT	1 cut(s)	852
SfaNI	GCATC	2 cut(s)	403, 1060
SfcI	CTRYAG	1 cut(s)	1047
SfoI	GGCGCC	1 cut(s)	380
Sfr274I	CTCGAG	1 cut(s)	53
Sfr303I	CCGCGG	1 cut(s)	111
SfuI	TTCGAA	1 cut(s)	959
SgrBI	CCGCGG	1 cut(s)	111
SinI	GGWCC	3 cut(s)	13, 205, 799
SlaI	CTCGAG	1 cut(s)	53
SmiMI	CAYNNNNRTG	3 cut(s)	768, 842, 927
SmlI	CTYRAG	3 cut(s)	53, 356, 423
SmoI	CTYRAG	3 cut(s)	53, 356, 423
SseBI	AGGCCT	1 cut(s)	1030
SspDI	GGCGCC	1 cut(s)	378
SspMI	CTAG	2 cut(s)	209, 1167
StuI	AGGCCT	1 cut(s)	1030
StyD4I	CCNGG	6 cut(s)	42, 162, 288, 795, 852, 942
StyI	CCWWGG	3 cut(s)	208, 840, 1054
TaaI	ACNGT	1 cut(s)	220
TaiI	ACGT	1 cut(s)	733
TaqI	TCGA	2 cut(s)	54, 959
Tru1I	TTAA	2 cut(s)	324, 621
Tru9I	TTAA	2 cut(s)	324, 621
TscAI	CASTG	4 cut(s)	223, 782, 929, 1087
TseFI	GTSAC	2 cut(s)	844, 1136
TseI	GCWGC	8 cut(s)	83, 89, 98, 104, 817, 934, 1046, 1129
Tsp45I	GTSAC	2 cut(s)	844, 1136
TspDTI	ATGAA	4 cut(s)	254, 281, 691, 752
TspGWI	ACGGA	2 cut(s)	186, 759
TspRI	CASTG	4 cut(s)	223, 782, 929, 1087
VneI	GTGCAC	1 cut(s)	1083
VpaK11BI	GGWCC	3 cut(s)	13, 205, 799
VspI	ATTAAT	1 cut(s)	621
XagI	CCTNNNNNAGG	1 cut(s)	947
XceI	RCATGY	1 cut(s)	160
XhoI	CTCGAG	1 cut(s)	53
XmaJI	CCTAGG	1 cut(s)	208
XspI	CTAG	2 cut(s)	209, 1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.