Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0012216

Physical Location & Seq

Genomic Coordinates Forward (+)

17627105 .. 17628772

Gene Structure 1668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g12500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGAAAGAACCAGAAAACGATCCAATCGCATCGTCGACCCAGCTCATCTCTTCACTCTACGACCAAATCCCACTCATCCAAACTTTCAAAGGTAAATGGGCCTTAATCCGGGACAAGCTCTCGGAGTTCCGGGCCCAGCTTGTCGACTTCGCCGACCTCCCAACCTCCACCTCCCACCCTCTCTCCATCCACCTCCTCCTCTCCGTCTCTCAAACCCTCAGCGACGCCGTTTCGCTCTCCCTCAAATGCCAGACCGCCAATCTCTCCGCCGGCAAGCTCCGCACCCAGAGCGACGTCGACTCGATCCTGGCCCGCCTTGACCGCCACGTCGCCGACGCCGAGATTTTGATCAAGAGCGGCGTCCTCCTGGACTCCGCTGTCTCGTCCGTCAGCAGCTCCTCCTCTAAGAGGGAGACGGTTCGGGCCGAGTGCCGGAACCTGGTGACTCGGCTCCAAATAGGAACCGCCGAGTCGAGGAACTCGGCGATGGAGGCGCTTTTAGGGCTTCTGCAGGAGGACGACAAGCACGTGATGATCGCCGTGGCGCAGGGGATCATTCCGGTGCTCGTGCGGTTACTCGATTCGAGCTCAATCGAAGCCAAGGAAAACGCCGTTTTCGCGATATCGATAGTGTCGATGGTGGAGAGCGGCAAGCACGTCTTGATTGCGGAGGGTTTGTCGCTGTTGAATCACCTGATGCGGGTGCTCGACTCGGGAAGTGGGTTCGCAAAGGAAAAGACTTGTTTGGCACTTGAAGCTCTGAGCATTTCGAAGGATAACGCGAGGGCAATTGGGTCTAGAGGTGGGATTTCGTCACTCTTGGACATTTGCCAGGGCGGCACGCCCGGCTCGCAGGCTTCGGCGGCGGGTGTGCTGAGAAATTTGGCTGGGTTTGCCGAGAATCAAGAGAATTTCTTGGAGGAAAATGGGGTTGGTGTGCTTTTGGGGCTTGTGAGTTCGGGGACGGCTTTGGCTCAAGAGAATGCGATTGGGTGTTTGTGTCATTTGGTTTCTGGGAGTGAAAGTTTGAAGCTTTTGGTTGTTAGGGAAGGTGGGATTGAGTGTTTGAAGAATTTCTGGGACTCTGGCTGGAACAATAACAATCGAAACCTCGAGGTTGCGGTCGAGTTCTTGAGGCACTTAGCTTCGTGTTCTCCGATTGCTGAAGTGCTTGTTTCTGACGGGTTTGTAGCTAGGCTTGTTGGGGTGTTGAGTTGTGGTGTGTTAGGAGTGAGAATTGCAGCAGCTAAGGCCGCTTATGAACTCGGGTTTTGCTCAAAAACTCGAAAGGAGATGGGTGAGCGTGGCTGCATTGACCCATTAATCAAAATGTTGGATGGTAAAGCCATTGAGGAGAAAGAATCAGCTGCGAAGGCCTTGTCGGAGTTGATTTTATACGCCGGTAATCGAAAGATTTTTAAGAAACATGAGGGTGGAATTGTGAGTTCAGTTCAGCTTTTGGACCCATCAATTCAGAATTTGGATAAGAAATACCCTGTTGCCTTATTGGCAGCGCTTGCACATTCAAACAAGCGGAGGAAGCAAATGATTGCTGCCGGTGCGTGTCTACATTTACAGAAACTCGTCGACATGGAAGTAGAGGGGTCTAAGAAGCTCTTGGAAAGCCTCGGTCGGGGTAAGATTTGGGGTGTTTTTGCCAGATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050896 GO:0051865 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

556

Amino Acids

59.33

Weight (kDa)

7.14

Isoelectric Point (pI)

36.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7032	PF23005	12 - 121	2.3e-33	Domain of unknown function (DUF7032)
ARM_ARMC5	PF24768	224 - 404	1.2e-06	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012216)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50900
fragaria_vesca	FvH4_5g09100
malus_domestica	MD06G1133700.v1.1 MD14G1150000.v1.1
prunus_persica	Prupe.5G144800_v2.0.a1
pyrus_communis	pycom06g12500 pycom14g12470
rosa_chinensis	RchiOBHm_Chr7g0189111
rosa_laevigata	RLG00000004633
rosa_multiflora	Rmu_co8393143.1_g000001 Rmu_sc0004290.1_g000010 Rmu_sc0007859.1_g000002
rosa_roxburghii	Rroxscaffold_3G00265780
rosa_rugosa	Rorug06G0496000
rosa_samantha	Rh7AG100800 Rh7BG103200 Rh7CG104700 Rh7DG102600
rosa_wichuraiana	Rw7G008690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	326, 377
AatII	GACGTC	1 cut(s)	297
AbsI	CCTCGAGG	1 cut(s)	1112
AccBSI	CCGCTC	2 cut(s)	357, 648
AccI	GTMKAC	5 cut(s)	35, 144, 297, 1567, 1587
AccII	CGCG	2 cut(s)	620, 782
AclWI	GGATC	3 cut(s)	14, 298, 560
AcsI	RAATTY	4 cut(s)	880, 910, 1072, 1477
AcuI	CTGAAG	1 cut(s)	1185
AcvI	CACGTG	1 cut(s)	529
AcyI	GRCGYC	4 cut(s)	225, 294, 336, 360
AfeI	AGCGCT	1 cut(s)	1515
AfiI	CCNNNNNNNGG	7 cut(s)	108, 408, 432, 439, 474, 700, 1633
AgsI	TTSAA	6 cut(s)	88, 688, 755, 1030, 1069, 1527
AjiI	CACGTC	2 cut(s)	328, 658
AjnI	CCWGG	4 cut(s)	306, 366, 438, 831
AjuI	GAANNNNNNNTTGG	2 cut(s)	915, 947
Alw21I	GWGCWC	3 cut(s)	567, 590, 708
Alw26I	GTCTC	3 cut(s)	211, 385, 407
AlwI	GGATC	3 cut(s)	14, 298, 560
Ama87I	CYCGRG	3 cut(s)	712, 1112, 1265
Aor51HI	AGCGCT	1 cut(s)	1515
AoxI	GGCC	6 cut(s)	99, 132, 309, 423, 1251, 1374
ApaI	GGGCCC	1 cut(s)	136
ApeKI	GCWGC	7 cut(s)	393, 1241, 1244, 1308, 1367, 1511, 1553
ApoI	RAATTY	4 cut(s)	880, 910, 1072, 1477
ArsI	GACNNNNNNTTYG	2 cut(s)	1364, 1396
AseI	ATTAAT	1 cut(s)	1322
Asp700I	GAANNNNTTC	1 cut(s)	1073
AspLEI	GCGC	3 cut(s)	496, 547, 1516
AspS9I	GGNCC	6 cut(s)	99, 132, 133, 310, 423, 1462
AsuC2I	CCSGG	3 cut(s)	110, 131, 846
AsuHPI	GGTGA	3 cut(s)	454, 683, 1310
AsuII	TTCGAA	1 cut(s)	770
AvaI	CYCGRG	3 cut(s)	712, 1112, 1265
AvaII	GGWCC	1 cut(s)	1462
BaeGI	GKGCMC	1 cut(s)	136
BanII	GRGCYC	2 cut(s)	136, 590
BauI	CACGAG	1 cut(s)	566
BbrPI	CACGTG	1 cut(s)	529
Bbv12I	GWGCWC	3 cut(s)	567, 590, 708
BbvCI	CCTCAGC	1 cut(s)	218
BbvI	GCAGC	7 cut(s)	405, 1253, 1256, 1295, 1354, 1523, 1540
BccI	CCATC	6 cut(s)	194, 481, 631, 1288, 1331, 1474
BceAI	ACGGC	4 cut(s)	212, 524, 596, 981
BciT130I	CCWGG	4 cut(s)	308, 368, 440, 833
BclI	TGATCA	1 cut(s)	348
BcnI	CCSGG	3 cut(s)	110, 131, 846
BcoDI	GTCTC	3 cut(s)	211, 385, 407
BfaI	CTAG	2 cut(s)	798, 1194
BfmI	CTRYAG	1 cut(s)	509
BfoI	RGCGCY	2 cut(s)	497, 1517
BglI	GCCNNNNNGGC	2 cut(s)	837, 1508
BglII	AGATCT	1 cut(s)	1661
Bme1390I	CCNGG	7 cut(s)	110, 131, 308, 368, 440, 833, 846
Bme18I	GGWCC	1 cut(s)	1462
BmeT110I	CYCGRG	3 cut(s)	712, 1112, 1265
BmgBI	CACGTC	2 cut(s)	328, 658
BmgT120I	GGNCC	6 cut(s)	99, 132, 133, 310, 423, 1462
BmiI	GGNNCC	5 cut(s)	134, 437, 452, 463, 1464
BmrFI	CCNGG	7 cut(s)	110, 131, 308, 368, 440, 833, 846
BmsI	GCATC	2 cut(s)	38, 687
Bpu10I	CCTNAGC	2 cut(s)	218, 1248
Bpu14I	TTCGAA	1 cut(s)	770
BpuEI	CTTGAG	2 cut(s)	960, 1153
BpuMI	CCSGG	3 cut(s)	110, 131, 846
Bsa29I	ATCGAT	1 cut(s)	626
BsaAI	YACGTR	1 cut(s)	529
BsaBI	GATNNNNATC	1 cut(s)	347
BsaHI	GRCGYC	4 cut(s)	225, 294, 336, 360
BsaJI	CCNNGG	4 cut(s)	540, 600, 832, 1627
BsaWI	WCCGGW	1 cut(s)	559
BsaXI	ACNNNNNCTCC	6 cut(s)	167, 197, 662, 692, 1009, 1039
Bsc4I	CCNNNNNNNGG	7 cut(s)	108, 408, 432, 439, 474, 700, 1633
Bse118I	RCCGGY	3 cut(s)	269, 1400, 1556
Bse8I	GATNNNNATC	1 cut(s)	347
BseBI	CCWGG	4 cut(s)	308, 368, 440, 833
BseCI	ATCGAT	1 cut(s)	626
BseDI	CCNNGG	4 cut(s)	540, 600, 832, 1627
BseGI	GGATG	3 cut(s)	75, 186, 1342
BseJI	GATNNNNATC	1 cut(s)	347
BseLI	CCNNNNNNNGG	7 cut(s)	108, 408, 432, 439, 474, 700, 1633
BseMII	CTCAG	3 cut(s)	232, 752, 866
BseRI	GAGGAG	5 cut(s)	185, 188, 388, 391, 1367
BseSI	GKGCMC	1 cut(s)	136
BseXI	GCAGC	7 cut(s)	405, 1253, 1256, 1295, 1354, 1523, 1540
BseYI	CCCAGC	3 cut(s)	39, 135, 887
Bsh1236I	CGCG	2 cut(s)	620, 782
Bsh1285I	CGRYCG	2 cut(s)	1125, 1633
BshFI	GGCC	6 cut(s)	101, 134, 311, 425, 1253, 1376
BshVI	ATCGAT	1 cut(s)	626
BsiEI	CGRYCG	2 cut(s)	1125, 1633
BsiHKAI	GWGCWC	3 cut(s)	567, 590, 708
BsiHKCI	CYCGRG	3 cut(s)	712, 1112, 1265
BsiSI	CCGG	8 cut(s)	109, 130, 270, 433, 560, 846, 1401, 1557
BslFI	GGGAC	3 cut(s)	125, 976, 1094
BslI	CCNNNNNNNGG	7 cut(s)	108, 408, 432, 439, 474, 700, 1633
BsmAI	GTCTC	3 cut(s)	211, 385, 407
BsmBI	CGTCTC	2 cut(s)	211, 407
BsmFI	GGGAC	3 cut(s)	125, 976, 1094
BsmI	GAATGC	1 cut(s)	988
BsnI	GGCC	6 cut(s)	101, 134, 311, 425, 1253, 1376
BsoBI	CYCGRG	3 cut(s)	712, 1112, 1265
Bsp119I	TTCGAA	1 cut(s)	770
Bsp120I	GGGCCC	1 cut(s)	132
Bsp1286I	GDGCHC	4 cut(s)	136, 567, 590, 708
Bsp143I	GATC	6 cut(s)	19, 303, 348, 534, 552, 1661
Bsp68I	TCGCGA	1 cut(s)	620
BspANI	GGCC	6 cut(s)	101, 134, 311, 425, 1253, 1376
BspCNI	CTCAG	3 cut(s)	231, 753, 867
BspDI	ATCGAT	1 cut(s)	626
BspFNI	CGCG	2 cut(s)	620, 782
BspLI	GGNNCC	5 cut(s)	134, 437, 452, 463, 1464
BspMAI	CTGCAG	1 cut(s)	513
BspPI	GGATC	3 cut(s)	14, 298, 560
BspT104I	TTCGAA	1 cut(s)	770
BsrBI	CCGCTC	2 cut(s)	357, 648
BsrFI	RCCGGY	3 cut(s)	269, 1400, 1556
BssAI	RCCGGY	3 cut(s)	269, 1400, 1556
BssECI	CCNNGG	4 cut(s)	540, 600, 832, 1627
BssMI	GATC	6 cut(s)	19, 303, 348, 534, 552, 1661
BssNI	GRCGYC	4 cut(s)	225, 294, 336, 360
BssSI	CACGAG	1 cut(s)	566
BssT1I	CCWWGG	1 cut(s)	600
Bst2BI	CACGAG	1 cut(s)	566
Bst2UI	CCWGG	4 cut(s)	308, 368, 440, 833
Bst4CI	ACNGT	1 cut(s)	418
Bst6I	CTCTTC	1 cut(s)	55
BstACI	GRCGYC	4 cut(s)	225, 294, 336, 360
BstAPI	GCANNNNNTGC	1 cut(s)	1517
BstBAI	YACGTR	1 cut(s)	529
BstBI	TTCGAA	1 cut(s)	770
BstC8I	GCNNGC	8 cut(s)	271, 275, 313, 653, 842, 851, 855, 1518
BstDEI	CTNAG	7 cut(s)	218, 405, 761, 875, 1141, 1248, 1608
BstDSI	CCRYGG	1 cut(s)	540
BstENI	CCTNNNNNAGG	1 cut(s)	406
BstF5I	GGATG	3 cut(s)	75, 186, 1342
BstFNI	CGCG	2 cut(s)	620, 782
BstH2I	RGCGCY	2 cut(s)	497, 1517
BstHHI	GCGC	3 cut(s)	496, 547, 1516
BstKTI	GATC	6 cut(s)	22, 306, 351, 537, 555, 1664
BstMAI	GTCTC	3 cut(s)	211, 385, 407
BstMBI	GATC	6 cut(s)	19, 303, 348, 534, 552, 1661
BstMCI	CGRYCG	2 cut(s)	1125, 1633
BstNI	CCWGG	4 cut(s)	308, 368, 440, 833
BstSCI	CCNGG	7 cut(s)	108, 129, 306, 366, 438, 831, 844
BstSFI	CTRYAG	1 cut(s)	509
BstSLI	GKGCMC	1 cut(s)	136
BstUI	CGCG	2 cut(s)	620, 782
BstV1I	GCAGC	7 cut(s)	405, 1253, 1256, 1295, 1354, 1523, 1540
BstX2I	RGATCY	1 cut(s)	1661
BstYI	RGATCY	1 cut(s)	1661
Bsu15I	ATCGAT	1 cut(s)	626
BsuRI	GGCC	6 cut(s)	101, 134, 311, 425, 1253, 1376
BsuTUI	ATCGAT	1 cut(s)	626
BtgI	CCRYGG	1 cut(s)	540
BtgZI	GCGATG	1 cut(s)	500
BtrI	CACGTC	2 cut(s)	328, 658
BtsCI	GGATG	3 cut(s)	75, 186, 1342
BtuMI	TCGCGA	1 cut(s)	620
Cac8I	GCNNGC	8 cut(s)	271, 275, 313, 653, 842, 851, 855, 1518
CfoI	GCGC	3 cut(s)	496, 547, 1516
Cfr10I	RCCGGY	3 cut(s)	269, 1400, 1556
Cfr13I	GGNCC	6 cut(s)	99, 132, 133, 310, 423, 1462
ClaI	ATCGAT	1 cut(s)	626
CseI	GACGC	3 cut(s)	233, 344, 349
CsiI	ACCWGGT	1 cut(s)	438
CviAII	CATG	2 cut(s)	1427, 1591
DdeI	CTNAG	7 cut(s)	218, 405, 761, 875, 1141, 1248, 1608
DpnI	GATC	6 cut(s)	21, 305, 350, 536, 554, 1663
DpnII	GATC	6 cut(s)	19, 303, 348, 534, 552, 1661
DrdI	GACNNNNNNGTC	2 cut(s)	326, 377
DseDI	GACNNNNNNGTC	2 cut(s)	326, 377
Eam1104I	CTCTTC	1 cut(s)	55
EarI	CTCTTC	1 cut(s)	55
EciI	GGCGGA	1 cut(s)	256
Ecl136II	GAGCTC	1 cut(s)	588
Eco130I	CCWWGG	1 cut(s)	600
Eco147I	AGGCCT	1 cut(s)	1376
Eco24I	GRGCYC	2 cut(s)	136, 590
Eco32I	GATATC	1 cut(s)	624
Eco47I	GGWCC	1 cut(s)	1462
Eco47III	AGCGCT	1 cut(s)	1515
Eco53kI	GAGCTC	1 cut(s)	588
Eco57I	CTGAAG	1 cut(s)	1185
Eco72I	CACGTG	1 cut(s)	529
Eco88I	CYCGRG	3 cut(s)	712, 1112, 1265
EcoICRI	GAGCTC	1 cut(s)	588
EcoNI	CCTNNNNNAGG	1 cut(s)	406
EcoRII	CCWGG	4 cut(s)	306, 366, 438, 831
EcoRV	GATATC	1 cut(s)	624
EcoT14I	CCWWGG	1 cut(s)	600
EcoT38I	GRGCYC	2 cut(s)	136, 590
ErhI	CCWWGG	1 cut(s)	600
Esp3I	CGTCTC	2 cut(s)	211, 407
FaeI	CATG	2 cut(s)	1430, 1594
FaiI	YATR	4 cut(s)	1260, 1396, 1428, 1592
FalI	AAGNNNNNCTT	4 cut(s)	644, 676, 1601, 1633
FaqI	GGGAC	3 cut(s)	125, 976, 1094
FatI	CATG	2 cut(s)	1426, 1590
FauI	CCCGC	3 cut(s)	320, 693, 859
FbaI	TGATCA	1 cut(s)	348
FblI	GTMKAC	5 cut(s)	35, 144, 297, 1567, 1587
FokI	GGATG	3 cut(s)	62, 173, 1349
FriOI	GRGCYC	2 cut(s)	136, 590
FspBI	CTAG	2 cut(s)	798, 1194
GlaI	GCGC	3 cut(s)	495, 546, 1515
GsaI	CCCAGC	3 cut(s)	43, 139, 891
HaeII	RGCGCY	2 cut(s)	497, 1517
HaeIII	GGCC	6 cut(s)	101, 134, 311, 425, 1253, 1376
HapII	CCGG	8 cut(s)	109, 130, 270, 433, 560, 846, 1401, 1557
HgaI	GACGC	3 cut(s)	233, 344, 349
HhaI	GCGC	3 cut(s)	496, 547, 1516
Hin1I	GRCGYC	4 cut(s)	225, 294, 336, 360
Hin1II	CATG	2 cut(s)	1430, 1594
Hin6I	GCGC	3 cut(s)	494, 545, 1514
HinP1I	GCGC	3 cut(s)	494, 545, 1514
HincII	GTYRAC	4 cut(s)	36, 145, 298, 1588
HindII	GTYRAC	4 cut(s)	36, 145, 298, 1588
HindIII	AAGCTT	1 cut(s)	1031
HpaII	CCGG	8 cut(s)	109, 130, 270, 433, 560, 846, 1401, 1557
HphI	GGTGA	3 cut(s)	454, 683, 1310
Hpy166II	GTNNAC	5 cut(s)	36, 145, 298, 1568, 1588
Hpy188I	TCNGA	6 cut(s)	124, 762, 1158, 1180, 1384, 1476
Hpy188III	TCNNGA	9 cut(s)	352, 619, 661, 714, 798, 905, 977, 1132, 1665
Hpy8I	GTNNAC	5 cut(s)	36, 145, 298, 1568, 1588
Hpy99I	CGWCG	7 cut(s)	37, 227, 296, 299, 332, 338, 1589
HpyAV	CCTTC	3 cut(s)	766, 1043, 1366
HpyCH4III	ACNGT	1 cut(s)	418
HpyCH4IV	ACGT	4 cut(s)	294, 327, 528, 657
HpyCH4V	TGCA	4 cut(s)	511, 1241, 1311, 1520
HpyF3I	CTNAG	7 cut(s)	218, 405, 761, 875, 1141, 1248, 1608
HpySE526I	ACGT	4 cut(s)	294, 327, 528, 657
Hsp92I	GRCGYC	4 cut(s)	225, 294, 336, 360
Hsp92II	CATG	2 cut(s)	1430, 1594
HspAI	GCGC	3 cut(s)	494, 545, 1514
KroI	GCCGGC	1 cut(s)	269
KroNI	GCCGGC	1 cut(s)	271
Ksp22I	TGATCA	1 cut(s)	348
Kzo9I	GATC	6 cut(s)	19, 303, 348, 534, 552, 1661
LmnI	GCTCC	3 cut(s)	282, 401, 456
Lsp1109I	GCAGC	7 cut(s)	405, 1253, 1256, 1295, 1354, 1523, 1540
LweI	GCATC	2 cut(s)	38, 687
MabI	ACCWGGT	1 cut(s)	438
MaeI	CTAG	2 cut(s)	798, 1194
MaeII	ACGT	4 cut(s)	294, 327, 528, 657
MaeIII	GTNAC	3 cut(s)	442, 573, 813
MalI	GATC	6 cut(s)	21, 305, 350, 536, 554, 1663
MbiI	CCGCTC	2 cut(s)	357, 648
MboI	GATC	6 cut(s)	19, 303, 348, 534, 552, 1661
MboII	GAAGA	2 cut(s)	42, 1081
MfeI	CAATTG	1 cut(s)	789
MflI	RGATCY	1 cut(s)	1661
MhlI	GDGCHC	4 cut(s)	136, 567, 590, 708
MluCI	AATT	8 cut(s)	789, 880, 910, 1072, 1236, 1437, 1470, 1477
MlyI	GAGTC	6 cut(s)	293, 365, 439, 479, 704, 1076
MmeI	TCCRAC	2 cut(s)	1314, 1362
MroNI	GCCGGC	1 cut(s)	269
MroXI	GAANNNNTTC	1 cut(s)	1073
MseI	TTAA	3 cut(s)	104, 1322, 1419
MslI	CAYNNNNRTG	2 cut(s)	560, 1431
MspA1I	CMGCKG	2 cut(s)	377, 1367
MspI	CCGG	8 cut(s)	109, 130, 270, 433, 560, 846, 1401, 1557
MspR9I	CCNGG	7 cut(s)	110, 131, 308, 368, 440, 833, 846
MunI	CAATTG	1 cut(s)	789
Mva1269I	GAATGC	1 cut(s)	988
MvaI	CCWGG	4 cut(s)	308, 368, 440, 833
MvnI	CGCG	2 cut(s)	620, 782
NaeI	GCCGGC	1 cut(s)	271
NciI	CCSGG	3 cut(s)	110, 131, 846
NdeII	GATC	6 cut(s)	19, 303, 348, 534, 552, 1661
NgoMIV	GCCGGC	1 cut(s)	269
NlaIII	CATG	2 cut(s)	1430, 1594
NlaIV	GGNNCC	5 cut(s)	134, 437, 452, 463, 1464
NmeAIII	GCCGAG	6 cut(s)	364, 427, 451, 461, 493, 922
NmuCI	GTSAC	2 cut(s)	442, 813
NruI	TCGCGA	1 cut(s)	620
NspV	TTCGAA	1 cut(s)	770
PaeR7I	CTCGAG	1 cut(s)	1112
PceI	AGGCCT	1 cut(s)	1376
PcsI	WCGNNNNNNNCGW	5 cut(s)	150, 336, 525, 632, 1154
PctI	GAATGC	1 cut(s)	988
PdiI	GCCGGC	1 cut(s)	271
PdmI	GAANNNNTTC	1 cut(s)	1073
PfeI	GAWTC	4 cut(s)	581, 688, 901, 1361
PfoI	TCCNGGA	2 cut(s)	108, 366
PleI	GAGTC	6 cut(s)	293, 365, 439, 478, 704, 1076
PmaCI	CACGTG	1 cut(s)	529
PmlI	CACGTG	1 cut(s)	529
PpsI	GAGTC	6 cut(s)	293, 365, 439, 478, 704, 1076
Ppu21I	YACGTR	1 cut(s)	529
PshBI	ATTAAT	1 cut(s)	1322
Psp124BI	GAGCTC	1 cut(s)	590
Psp6I	CCWGG	4 cut(s)	306, 366, 438, 831
PspCI	CACGTG	1 cut(s)	529
PspFI	CCCAGC	3 cut(s)	39, 135, 887
PspGI	CCWGG	4 cut(s)	306, 366, 438, 831
PspN4I	GGNNCC	5 cut(s)	134, 437, 452, 463, 1464
PspOMI	GGGCCC	1 cut(s)	132
PspPI	GGNCC	6 cut(s)	99, 132, 133, 310, 423, 1462
PspXI	VCTCGAGB	1 cut(s)	1112
PstI	CTGCAG	1 cut(s)	513
PsuI	RGATCY	1 cut(s)	1661
PvuII	CAGCTG	1 cut(s)	1367
RruI	TCGCGA	1 cut(s)	620
RseI	CAYNNNNRTG	2 cut(s)	560, 1431
SacI	GAGCTC	1 cut(s)	590
SalI	GTCGAC	4 cut(s)	34, 143, 296, 1586
SaqAI	TTAA	3 cut(s)	104, 1322, 1419
Sau3AI	GATC	6 cut(s)	19, 303, 348, 534, 552, 1661
Sau96I	GGNCC	6 cut(s)	99, 132, 133, 310, 423, 1462
SchI	GAGTC	6 cut(s)	293, 365, 439, 479, 704, 1076
ScrFI	CCNGG	7 cut(s)	110, 131, 308, 368, 440, 833, 846
SduI	GDGCHC	4 cut(s)	136, 567, 590, 708
SexAI	ACCWGGT	1 cut(s)	438
SfaNI	GCATC	2 cut(s)	38, 687
SfcI	CTRYAG	1 cut(s)	509
Sfr274I	CTCGAG	1 cut(s)	1112
SfuI	TTCGAA	1 cut(s)	770
SinI	GGWCC	1 cut(s)	1462
SlaI	CTCGAG	1 cut(s)	1112
SmiMI	CAYNNNNRTG	2 cut(s)	560, 1431
SmlI	CTYRAG	3 cut(s)	975, 1112, 1132
SmoI	CTYRAG	3 cut(s)	975, 1112, 1132
Sse9I	AATT	8 cut(s)	789, 880, 910, 1072, 1236, 1437, 1470, 1477
SseBI	AGGCCT	1 cut(s)	1376
SspMI	CTAG	2 cut(s)	798, 1194
SstI	GAGCTC	1 cut(s)	590
StuI	AGGCCT	1 cut(s)	1376
StyD4I	CCNGG	7 cut(s)	108, 129, 306, 366, 438, 831, 844
StyI	CCWWGG	1 cut(s)	600
TaaI	ACNGT	1 cut(s)	418
TaiI	ACGT	4 cut(s)	297, 330, 531, 660
TaqII	GACCGA	1 cut(s)	1619
TasI	AATT	8 cut(s)	789, 880, 910, 1072, 1236, 1437, 1470, 1477
TauI	GCSGC	5 cut(s)	360, 651, 840, 866, 1256
TfiI	GAWTC	4 cut(s)	581, 688, 901, 1361
Tru1I	TTAA	3 cut(s)	104, 1322, 1419
Tru9I	TTAA	3 cut(s)	104, 1322, 1419
TseFI	GTSAC	2 cut(s)	442, 813
TseI	GCWGC	7 cut(s)	393, 1241, 1244, 1308, 1367, 1511, 1553
Tsp45I	GTSAC	2 cut(s)	442, 813
TspDTI	ATGAA	2 cut(s)	17, 1275
TspGWI	ACGGA	2 cut(s)	193, 376
VpaK11BI	GGWCC	1 cut(s)	1462
VspI	ATTAAT	1 cut(s)	1322
XagI	CCTNNNNNAGG	1 cut(s)	406
XapI	RAATTY	4 cut(s)	880, 910, 1072, 1477
XbaI	TCTAGA	1 cut(s)	797
XhoI	CTCGAG	1 cut(s)	1112
XmiI	GTMKAC	5 cut(s)	35, 144, 297, 1567, 1587
XmnI	GAANNNNTTC	1 cut(s)	1073
XspI	CTAG	2 cut(s)	798, 1194
ZraI	GACGTC	1 cut(s)	295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.