pycom06g13830

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0014738
Physical Location & Seq
Forward (+)
18714710 .. 18717437
2728 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2019 bp
ATGGAAGAAGATGAGGAGATGGAGTTTACGATCGATGAAAATGAAACTTGGAAAAAAAAAAAAAAAAAAAAACAGCACTCTAGGAATCGTCAAAACCTAGTGTGGCTGAAAAGGTTACCTCCCAGGAGAGGAACAAACTATAAAATCCAAGATTATGGGAGTGTGACATACATAGACAAGCCTTGTCCTTGGAGAGGTCTTTGCCGTAAATTTTATAATCTCCCTTGTAATATCCGAAATCACAAGAAGATCGCTAGCTATTTAAGTCCTTGCTGCTTGGGATTGGGGTCTTTCAGGATGGGGCCAAACCGAAAATTCCTGCCTAAGGAGTTCATGATCAATAATGAAAGGACTAATAAAAGGAGTGTCCTTGATCTCATTACTCACTCTGCTGCCTCAGCCATGCCTTGCTATCCTTATCCATACACACCCTTTCTGGAGGAGGGCGCTACAGTTTCTATCCTCCCTTACTCGGATGAAAGCGGAGACCATAAGAGGCTGAAAGGGAATATAAATATCTCCGACAGTCATAACAGCCTTTATAGTGGTGGAGGAAGCGAAGGTAGTTGCATTACTGACATCAGCCTCAGCCGCAGCAGCAGCGCGAATAGCTTCAAGACCTTGCCAAGGCTTCATTTCAGGGATCATATTTGGACTTACTCACAAAGGTACCTTGCAGCTGAGGCTGTTGAGGAGGCAGCAACAGCTATGTCCAATGCCAAGGAAAATGGAGCGGAGGAGGACGGAACTGCTGATGGGATGAGGCTTGTTCAGCTCCTAATTGCTTGCGCTGAAGCTGTTGCTTGTCGCGACAAGTCACATGCCTCCGTGTTACTATCTGAGCTTCGGGCCAATGCTTTGGTCTTTGGCTCTTCATTCCAGCGCGTGGCATCATGTTTTGTCCAAGGCCTTGCCAACCGCCTAGCCCTGGTTCAACCGCTCGGGGCAGTAGGGTTCATTGGGTCCGCAATGAGCACGAAAGACTTTGCCTTGGACAAGAAGGAAGAGGCATTGCGCCTTGTTTATGAGATTTGCCCCCACATTCAGTTTGGTCACTTTGTGGCCAATTCATCAATATTGGAAGCCTTTGAGGGAGAGAGTTTTGTTCATGTGGTAGACCTTGGGATGACCCTTGGTCTACCACATGGAGACCAGTGGCGAGGCTTGATCCAAAGCCTTGCCACACGTACAGGCCAGCCACCTACACGCCTTAGAATAACCGGGGTTGGCCTTTGCGGTGACAGATTGCAAATCATTGGAGGAGAGCTCAAGGCCTATGCCGAAAGCTTGGGAATAAACCTGGAGTTTTCTGTGGTGGAAAGCAATTTGGAAAACCTGCGTCCGGAGGACATCAAAATGTATGATGGTGAAGTCCTTAAAGCAGAGGAGCTCTCAATTCTGTCCTGCAGATCGATCCATGAGCTTTCGCCCAAAATCTTGGTTCTTGTGGAGCAAGACTCAAGCCACAATGGACCATTTTTCTTGGGGAGGTTTATGGAAGCACTGCATTATTACTCTGCAATCTTTGACTCCCTCGATGCCATGCTGCCAAAATATGACACGAGGCGCGCGAAGATGGAGCAGTTCTACTTTGCTGAGGAGATTAAGAACATAATTAGCTGTGAGGGGCCGACAAGGGTGGAGAGGCACGAGAGGGTTGATCAGTGGCGCCGGAGGATGAGCCGTGCAGGGTTTCAGGCTACGCAGATTAAGATGTTGGCTCAGGCAAAGCAGTGGCTCGGAAAGATCAAGATCTGTGAGGGCTACACTATCATGGAAGAGAAGGGTTGTTTGGTTCTTGGTTGCAAACATTTTTCGGTTCCAAAATCGCAGCTCAAAATTCAGTTAAAAAACCAAAATAAAAAAAAGTACAAAAAAAATCCCAACTCACATTTCACACCAAATTCCAATAAAACAATTCCAGGGATCTTGGAAATGAGTTTGGCTTTCAAAGTTGAGCTGTTTAGATGGAATAAAGAGGAAATAGCCTCCTTCGTGTGGATATTTAATTTAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

673

Amino Acids

76.04

Weight (kDa)

8.82

Isoelectric Point (pI)

51.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 256 - 603 6.5e-93 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014738)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g07610
malus_domestica MD06G1148900.v1.1 MD14G1162800.v1.1
prunus_persica Prupe.5G156100_v2.0.a1
pyrus_communis pycom06g13830
rosa_chinensis RchiOBHm_Chr7g0190881
rosa_laevigata RLG00000004489
rosa_multiflora Rmu_sc0004443.1_g000019 Rmu_sc0006903.1_g000003
rosa_roxburghii Rroxscaffold_3G00264230
rosa_rugosa Rorug06G0507700
rosa_samantha Rh1DG013400 Rh1DG013500 Rh7AG114400 Rh7CG119900 Rh7DG118200
rosa_wichuraiana Rw7G009980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 216
Acc36I ACCTGC 1 cut(s) 1344
Acc65I GGTACC 1 cut(s) 669
AccB1I GGYRCC 2 cut(s) 669, 1668
AccB7I CCANNNNNTGG 1 cut(s) 886
AccBSI CCGCTC 2 cut(s) 734, 940
AccI GTMKAC 2 cut(s) 1116, 1138
AccII CGCG 5 cut(s) 605, 810, 885, 1569, 1571
AccIII TCCGGA 1 cut(s) 1342
AciI CCGC 7 cut(s) 483, 592, 734, 919, 938, 966, 1236
AclWI GGATC 4 cut(s) 651, 1162, 1408, 1934
AcoI YGGCCR 1 cut(s) 1062
AcsI RAATTY 4 cut(s) 209, 314, 1839, 1903
AcuI CTGAAG 1 cut(s) 813
AcyI GRCGYC 1 cut(s) 1669
AdeI CACNNNGTG 1 cut(s) 1060
AfaI GTAC 3 cut(s) 671, 1189, 1871
AfiI CCNNNNNNNGG 9 cut(s) 128, 194, 325, 472, 627, 886, 928, 1342, 1998
AflIII ACRYGT 1 cut(s) 1184
AgsI TTSAA 3 cut(s) 616, 935, 1951
AhdI GACNNNNNGTC 1 cut(s) 1134
AjnI CCWGG 4 cut(s) 122, 927, 1299, 1921
AjuI GAANNNNNNNTTGG 4 cut(s) 1775, 1807, 1877, 1909
Alw21I GWGCWC 3 cut(s) 977, 1269, 1392
Alw26I GTCTC 2 cut(s) 480, 1143
AlwI GGATC 4 cut(s) 651, 1162, 1408, 1934
Ama87I CYCGRG 1 cut(s) 941
Aor13HI TCCGGA 1 cut(s) 1342
AoxI GGCC 8 cut(s) 302, 849, 907, 1062, 1192, 1228, 1272, 1628
ApeKI GCWGC 9 cut(s) 273, 392, 594, 597, 600, 677, 698, 1546, 1831
ApoI RAATTY 4 cut(s) 209, 314, 1839, 1903
Asp700I GAANNNNTTC 1 cut(s) 611
Asp718I GGTACC 1 cut(s) 669
AspLEI GCGC 8 cut(s) 449, 605, 791, 885, 1017, 1569, 1571, 1671
AspS9I GGNCC 5 cut(s) 302, 849, 963, 1472, 1628
AsuC2I CCSGG 1 cut(s) 1222
AsuHPI GGTGA 2 cut(s) 1250, 1379
AsuNHI GCTAGC 1 cut(s) 254
AvaI CYCGRG 1 cut(s) 941
AvaII GGWCC 2 cut(s) 963, 1472
AxyI CCTNAGG 1 cut(s) 324
BaeI ACNNNNGTAYC 2 cut(s) 653, 686
BalI TGGCCA 1 cut(s) 1064
BanI GGYRCC 2 cut(s) 669, 1668
BanII GRGCYC 2 cut(s) 1269, 1392
BauI CACGAG 2 cut(s) 1561, 1649
Bbv12I GWGCWC 3 cut(s) 977, 1269, 1392
BbvCI CCTCAGC 4 cut(s) 397, 587, 681, 1596
BbvI GCAGC 9 cut(s) 260, 379, 606, 609, 612, 689, 710, 1533, 1843
BccI CCATC 6 cut(s) 13, 292, 749, 1358, 1570, 1962
BceAI ACGGC 2 cut(s) 189, 1668
BciT130I CCWGG 4 cut(s) 124, 929, 1301, 1923
BclI TGATCA 2 cut(s) 336, 1660
BcnI CCSGG 1 cut(s) 1222
BcoDI GTCTC 2 cut(s) 480, 1143
BfaI CTAG 4 cut(s) 81, 98, 255, 923
BfmI CTRYAG 2 cut(s) 450, 1405
BfoI RGCGCY 2 cut(s) 450, 1672
BfuAI ACCTGC 1 cut(s) 1344
BglII AGATCT 1 cut(s) 1752
Bme1390I CCNGG 5 cut(s) 124, 929, 1222, 1301, 1923
Bme18I GGWCC 2 cut(s) 963, 1472
BmeRI GACNNNNNGTC 1 cut(s) 1134
BmeT110I CYCGRG 1 cut(s) 941
BmgT120I GGNCC 5 cut(s) 302, 849, 963, 1472, 1628
BmiI GGNNCC 6 cut(s) 303, 671, 964, 1629, 1670, 1821
BmrFI CCNGG 5 cut(s) 124, 929, 1222, 1301, 1923
BmsI GCATC 2 cut(s) 899, 1528
BmtI GCTAGC 1 cut(s) 258
BplI GAGNNNNNCTC 6 cut(s) 1251, 1283, 1376, 1408, 1442, 1474
BpmI CTGGAG 2 cut(s) 458, 1322
Bpu10I CCTNAGC 5 cut(s) 397, 587, 681, 1596, 1722
BpuEI CTTGAG 2 cut(s) 1253, 1444
BpuMI CCSGG 1 cut(s) 1222
Bsa29I ATCGAT 2 cut(s) 33, 1412
BsaAI YACGTR 1 cut(s) 1187
BsaBI GATNNNNATC 1 cut(s) 1751
BsaHI GRCGYC 1 cut(s) 1669
BsaI GGTCTC 2 cut(s) 480, 1143
BsaWI WCCGGW 1 cut(s) 1342
BsaXI ACNNNNNCTCC 2 cut(s) 8, 38
Bsc4I CCNNNNNNNGG 9 cut(s) 128, 194, 325, 472, 627, 886, 928, 1342, 1998
Bse1I ACTGG 1 cut(s) 1153
Bse21I CCTNAGG 1 cut(s) 324
Bse3DI GCAATG 2 cut(s) 975, 1010
Bse8I GATNNNNATC 1 cut(s) 1751
BseAI TCCGGA 1 cut(s) 1342
BseBI CCWGG 4 cut(s) 124, 929, 1301, 1923
BseCI ATCGAT 2 cut(s) 33, 1412
BseGI GGATG 5 cut(s) 303, 481, 765, 1131, 1683
BseJI GATNNNNATC 1 cut(s) 1751
BseLI CCNNNNNNNGG 9 cut(s) 128, 194, 325, 472, 627, 886, 928, 1342, 1998
BseMI GCAATG 2 cut(s) 975, 1010
BseMII CTCAG 6 cut(s) 411, 601, 672, 831, 1587, 1736
BseNI ACTGG 1 cut(s) 1153
BsePI GCGCGC 1 cut(s) 1567
BseRI GAGGAG 7 cut(s) 29, 455, 707, 752, 1275, 1400, 1613
BseXI GCAGC 9 cut(s) 260, 379, 606, 609, 612, 689, 710, 1533, 1843
BsgI GTGCAG 1 cut(s) 1707
Bsh1236I CGCG 5 cut(s) 605, 810, 885, 1569, 1571
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 8 cut(s) 304, 851, 909, 1064, 1194, 1230, 1274, 1630
BshNI GGYRCC 2 cut(s) 669, 1668
BshVI ATCGAT 2 cut(s) 33, 1412
BsiEI CGRYCG 1 cut(s) 33
BsiHKAI GWGCWC 3 cut(s) 977, 1269, 1392
BsiHKCI CYCGRG 1 cut(s) 941
BsiSI CCGG 3 cut(s) 1221, 1343, 1672
BslI CCNNNNNNNGG 9 cut(s) 128, 194, 325, 472, 627, 886, 928, 1342, 1998
BsmAI GTCTC 2 cut(s) 480, 1143
BsnI GGCC 8 cut(s) 304, 851, 909, 1064, 1194, 1230, 1274, 1630
Bso31I GGTCTC 2 cut(s) 480, 1143
BsoBI CYCGRG 1 cut(s) 941
Bsp1286I GDGCHC 3 cut(s) 977, 1269, 1392
Bsp13I TCCGGA 1 cut(s) 1342
Bsp68I TCGCGA 1 cut(s) 810
BspACI CCGC 7 cut(s) 483, 592, 734, 919, 938, 966, 1236
BspANI GGCC 8 cut(s) 304, 851, 909, 1064, 1194, 1230, 1274, 1630
BspCNI CTCAG 6 cut(s) 410, 600, 673, 832, 1588, 1735
BspDI ATCGAT 2 cut(s) 33, 1412
BspEI TCCGGA 1 cut(s) 1342
BspFNI CGCG 5 cut(s) 605, 810, 885, 1569, 1571
BspHI TCATGA 1 cut(s) 333
BspLI GGNNCC 6 cut(s) 303, 671, 964, 1629, 1670, 1821
BspMAI CTGCAG 1 cut(s) 1409
BspMI ACCTGC 1 cut(s) 1344
BspOI GCTAGC 1 cut(s) 258
BspPI GGATC 4 cut(s) 651, 1162, 1408, 1934
BspQI GCTCTTC 1 cut(s) 877
BspT107I GGYRCC 2 cut(s) 669, 1668
BspTNI GGTCTC 2 cut(s) 480, 1143
BsrBI CCGCTC 2 cut(s) 734, 940
BsrDI GCAATG 2 cut(s) 975, 1010
BsrI ACTGG 1 cut(s) 1153
BssHII GCGCGC 1 cut(s) 1567
BssNI GRCGYC 1 cut(s) 1669
BssSI CACGAG 2 cut(s) 1561, 1649
BssT1I CCWWGG 7 cut(s) 188, 626, 720, 904, 990, 1120, 1132
Bst2BI CACGAG 2 cut(s) 1561, 1649
Bst2UI CCWGG 4 cut(s) 124, 929, 1301, 1923
Bst4CI ACNGT 2 cut(s) 454, 527
Bst6I CTCTTC 3 cut(s) 877, 999, 1773
BstACI GRCGYC 1 cut(s) 1669
BstBAI YACGTR 1 cut(s) 1187
BstC8I GCNNGC 4 cut(s) 256, 787, 1196, 1569
BstDEI CTNAG 8 cut(s) 324, 397, 587, 681, 840, 1211, 1596, 1722
BstEII GGTNACC 1 cut(s) 114
BstENI CCTNNNNNAGG 3 cut(s) 192, 323, 625
BstF5I GGATG 5 cut(s) 303, 481, 765, 1131, 1683
BstFNI CGCG 5 cut(s) 605, 810, 885, 1569, 1571
BstH2I RGCGCY 2 cut(s) 450, 1672
BstHHI GCGC 8 cut(s) 449, 605, 791, 885, 1017, 1569, 1571, 1671
BstMAI GTCTC 2 cut(s) 480, 1143
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 8 cut(s) 398, 591, 597, 600, 609, 683, 704, 772
BstNI CCWGG 4 cut(s) 124, 929, 1301, 1923
BstNSI RCATGY 1 cut(s) 824
BstPI GGTNACC 1 cut(s) 114
BstSCI CCNGG 5 cut(s) 122, 927, 1220, 1299, 1921
BstSFI CTRYAG 2 cut(s) 450, 1405
BstUI CGCG 5 cut(s) 605, 810, 885, 1569, 1571
BstV1I GCAGC 9 cut(s) 260, 379, 606, 609, 612, 689, 710, 1533, 1843
BstX2I RGATCY 2 cut(s) 1752, 1926
BstXI CCANNNNNNTGG 3 cut(s) 155, 859, 1438
BstYI RGATCY 2 cut(s) 1752, 1926
Bsu15I ATCGAT 2 cut(s) 33, 1412
Bsu36I CCTNAGG 1 cut(s) 324
BsuRI GGCC 8 cut(s) 304, 851, 909, 1064, 1194, 1230, 1274, 1630
BsuTUI ATCGAT 2 cut(s) 33, 1412
BtsCI GGATG 5 cut(s) 303, 481, 765, 1131, 1683
BtsI GCAGTG 2 cut(s) 1502, 1739
BtsIMutI CAGTG 4 cut(s) 1160, 1502, 1670, 1739
BtuMI TCGCGA 1 cut(s) 810
BveI ACCTGC 1 cut(s) 1344
Cac8I GCNNGC 4 cut(s) 256, 787, 1196, 1569
CciI TCATGA 1 cut(s) 333
CfoI GCGC 8 cut(s) 449, 605, 791, 885, 1017, 1569, 1571, 1671
Cfr13I GGNCC 5 cut(s) 302, 849, 963, 1472, 1628
ClaI ATCGAT 2 cut(s) 33, 1412
CseI GACGC 1 cut(s) 1328
Csp6I GTAC 3 cut(s) 670, 1188, 1870
CviAII CATG 9 cut(s) 334, 403, 821, 894, 1109, 1145, 1418, 1543, 1774
CviQI GTAC 3 cut(s) 670, 1188, 1870
DdeI CTNAG 8 cut(s) 324, 397, 587, 681, 840, 1211, 1596, 1722
DinI GGCGCC 1 cut(s) 1670
DraIII CACNNNGTG 1 cut(s) 1060
DriI GACNNNNNGTC 1 cut(s) 1134
EaeI YGGCCR 1 cut(s) 1062
Eam1104I CTCTTC 3 cut(s) 877, 999, 1773
Eam1105I GACNNNNNGTC 1 cut(s) 1134
EarI CTCTTC 3 cut(s) 877, 999, 1773
Ecl136II GAGCTC 2 cut(s) 1267, 1390
Eco130I CCWWGG 7 cut(s) 188, 626, 720, 904, 990, 1120, 1132
Eco147I AGGCCT 2 cut(s) 909, 1274
Eco24I GRGCYC 2 cut(s) 1269, 1392
Eco31I GGTCTC 2 cut(s) 480, 1143
Eco47I GGWCC 2 cut(s) 963, 1472
Eco53kI GAGCTC 2 cut(s) 1267, 1390
Eco57I CTGAAG 1 cut(s) 813
Eco81I CCTNAGG 1 cut(s) 324
Eco88I CYCGRG 1 cut(s) 941
Eco91I GGTNACC 1 cut(s) 114
EcoICRI GAGCTC 2 cut(s) 1267, 1390
EcoNI CCTNNNNNAGG 3 cut(s) 192, 323, 625
EcoO65I GGTNACC 1 cut(s) 114
EcoRII CCWGG 4 cut(s) 122, 927, 1299, 1921
EcoT14I CCWWGG 7 cut(s) 188, 626, 720, 904, 990, 1120, 1132
EcoT38I GRGCYC 2 cut(s) 1269, 1392
EgeI GGCGCC 1 cut(s) 1670
EheI GGCGCC 1 cut(s) 1670
ErhI CCWWGG 7 cut(s) 188, 626, 720, 904, 990, 1120, 1132
FaeI CATG 9 cut(s) 337, 406, 824, 897, 1112, 1148, 1421, 1546, 1777
FatI CATG 9 cut(s) 333, 402, 820, 893, 1108, 1144, 1417, 1542, 1773
FbaI TGATCA 2 cut(s) 336, 1660
FblI GTMKAC 2 cut(s) 1116, 1138
FokI GGATG 5 cut(s) 310, 488, 772, 1138, 1690
FriOI GRGCYC 2 cut(s) 1269, 1392
FspBI CTAG 4 cut(s) 81, 98, 255, 923
GlaI GCGC 8 cut(s) 448, 604, 790, 884, 1016, 1568, 1570, 1670
GsuI CTGGAG 2 cut(s) 458, 1322
HaeII RGCGCY 2 cut(s) 450, 1672
HaeIII GGCC 8 cut(s) 304, 851, 909, 1064, 1194, 1230, 1274, 1630
HapII CCGG 3 cut(s) 1221, 1343, 1672
HgaI GACGC 1 cut(s) 1328
HhaI GCGC 8 cut(s) 449, 605, 791, 885, 1017, 1569, 1571, 1671
Hin1I GRCGYC 1 cut(s) 1669
Hin1II CATG 9 cut(s) 337, 406, 824, 897, 1112, 1148, 1421, 1546, 1777
Hin6I GCGC 8 cut(s) 447, 603, 789, 883, 1015, 1567, 1569, 1669
HinP1I GCGC 8 cut(s) 447, 603, 789, 883, 1015, 1567, 1569, 1669
HindIII AAGCTT 1 cut(s) 1285
HinfI GANTC 3 cut(s) 85, 1457, 1529
HpaII CCGG 3 cut(s) 1221, 1343, 1672
HphI GGTGA 2 cut(s) 1250, 1379
Hpy166II GTNNAC 3 cut(s) 27, 1117, 1139
Hpy188I TCNGA 5 cut(s) 236, 475, 523, 841, 1742
Hpy188III TCNNGA 7 cut(s) 295, 334, 437, 616, 809, 1343, 1750
Hpy8I GTNNAC 3 cut(s) 27, 1117, 1139
HpyAV CCTTC 4 cut(s) 554, 994, 1777, 2002
HpyCH4III ACNGT 2 cut(s) 454, 527
HpyCH4IV ACGT 1 cut(s) 1186
HpyCH4V TGCA 8 cut(s) 570, 677, 1249, 1407, 1507, 1520, 1688, 1806
HpyF10VI GCNNNNNNNGC 8 cut(s) 398, 591, 597, 600, 609, 683, 704, 772
HpyF3I CTNAG 8 cut(s) 324, 397, 587, 681, 840, 1211, 1596, 1722
HpySE526I ACGT 1 cut(s) 1186
Hsp92I GRCGYC 1 cut(s) 1669
Hsp92II CATG 9 cut(s) 337, 406, 824, 897, 1112, 1148, 1421, 1546, 1777
HspAI GCGC 8 cut(s) 447, 603, 789, 883, 1015, 1567, 1569, 1669
KasI GGCGCC 1 cut(s) 1668
Kpn2I TCCGGA 1 cut(s) 1342
KpnI GGTACC 1 cut(s) 673
Ksp22I TGATCA 2 cut(s) 336, 1660
LguI GCTCTTC 1 cut(s) 877
LmnI GCTCC 5 cut(s) 731, 780, 1387, 1450, 1579
Lsp1109I GCAGC 9 cut(s) 260, 379, 606, 609, 612, 689, 710, 1533, 1843
LweI GCATC 2 cut(s) 899, 1528
MaeI CTAG 4 cut(s) 81, 98, 255, 923
MaeII ACGT 1 cut(s) 1186
MaeIII GTNAC 6 cut(s) 114, 163, 816, 831, 1052, 1238
MbiI CCGCTC 2 cut(s) 734, 940
MboII GAAGA 7 cut(s) 17, 20, 259, 864, 1016, 1585, 1790
MflI RGATCY 2 cut(s) 1752, 1926
MhlI GDGCHC 3 cut(s) 977, 1269, 1392
MlsI TGGCCA 1 cut(s) 1064
MluNI TGGCCA 1 cut(s) 1064
Mly113I GGCGCC 1 cut(s) 1669
MlyI GAGTC 2 cut(s) 1451, 1523
MmeI TCCRAC 1 cut(s) 546
Mox20I TGGCCA 1 cut(s) 1064
MroI TCCGGA 1 cut(s) 1342
MroXI GAANNNNTTC 1 cut(s) 611
MscI TGGCCA 1 cut(s) 1064
MseI TTAA 6 cut(s) 263, 1377, 1605, 1710, 1847, 2007
MslI CAYNNNNRTG 2 cut(s) 1355, 1772
Msp20I TGGCCA 1 cut(s) 1064
MspA1I CMGCKG 1 cut(s) 680
MspI CCGG 3 cut(s) 1221, 1343, 1672
MspR9I CCNGG 5 cut(s) 124, 929, 1222, 1301, 1923
MvaI CCWGG 4 cut(s) 124, 929, 1301, 1923
MvnI CGCG 5 cut(s) 605, 810, 885, 1569, 1571
MwoI GCNNNNNNNGC 8 cut(s) 398, 591, 597, 600, 609, 683, 704, 772
NarI GGCGCC 1 cut(s) 1669
NciI CCSGG 1 cut(s) 1222
NheI GCTAGC 1 cut(s) 254
NlaIII CATG 9 cut(s) 337, 406, 824, 897, 1112, 1148, 1421, 1546, 1777
NlaIV GGNNCC 6 cut(s) 303, 671, 964, 1629, 1670, 1821
NmuCI GTSAC 4 cut(s) 163, 816, 1052, 1238
NruI TCGCGA 1 cut(s) 810
NspI RCATGY 1 cut(s) 824
PagI TCATGA 1 cut(s) 333
PauI GCGCGC 1 cut(s) 1567
PceI AGGCCT 2 cut(s) 909, 1274
PciSI GCTCTTC 1 cut(s) 877
PcsI WCGNNNNNNNCGW 1 cut(s) 1568
PdmI GAANNNNTTC 1 cut(s) 611
PfeI GAWTC 1 cut(s) 85
PflMI CCANNNNNTGG 1 cut(s) 886
Ple19I CGATCG 1 cut(s) 33
PleI GAGTC 2 cut(s) 1451, 1523
PluTI GGCGCC 1 cut(s) 1672
PpsI GAGTC 2 cut(s) 1451, 1523
Ppu21I YACGTR 1 cut(s) 1187
PsiI TTATAA 1 cut(s) 216
Psp124BI GAGCTC 2 cut(s) 1269, 1392
Psp6I CCWGG 4 cut(s) 122, 927, 1299, 1921
PspEI GGTNACC 1 cut(s) 114
PspGI CCWGG 4 cut(s) 122, 927, 1299, 1921
PspN4I GGNNCC 6 cut(s) 303, 671, 964, 1629, 1670, 1821
PspPI GGNCC 5 cut(s) 302, 849, 963, 1472, 1628
PstI CTGCAG 1 cut(s) 1409
PsuI RGATCY 2 cut(s) 1752, 1926
PteI GCGCGC 1 cut(s) 1567
PvuI CGATCG 1 cut(s) 33
PvuII CAGCTG 1 cut(s) 680
RruI TCGCGA 1 cut(s) 810
RsaI GTAC 3 cut(s) 671, 1189, 1871
RsaNI GTAC 3 cut(s) 670, 1188, 1870
RseI CAYNNNNRTG 2 cut(s) 1355, 1772
SacI GAGCTC 2 cut(s) 1269, 1392
SapI GCTCTTC 1 cut(s) 877
SaqAI TTAA 6 cut(s) 263, 1377, 1605, 1710, 1847, 2007
Sau96I GGNCC 5 cut(s) 302, 849, 963, 1472, 1628
SchI GAGTC 2 cut(s) 1451, 1523
ScrFI CCNGG 5 cut(s) 124, 929, 1222, 1301, 1923
SduI GDGCHC 3 cut(s) 977, 1269, 1392
SfaNI GCATC 2 cut(s) 899, 1528
SfcI CTRYAG 2 cut(s) 450, 1405
SfoI GGCGCC 1 cut(s) 1670
SinI GGWCC 2 cut(s) 963, 1472
SmiMI CAYNNNNRTG 2 cut(s) 1355, 1772
SmlI CTYRAG 2 cut(s) 1268, 1459
SmoI CTYRAG 2 cut(s) 1268, 1459
SseBI AGGCCT 2 cut(s) 909, 1274
SsiI CCGC 7 cut(s) 483, 592, 734, 919, 938, 966, 1236
SspDI GGCGCC 1 cut(s) 1668
SspI AATATT 1 cut(s) 1077
SspMI CTAG 4 cut(s) 81, 98, 255, 923
SstI GAGCTC 2 cut(s) 1269, 1392
StuI AGGCCT 2 cut(s) 909, 1274
StyD4I CCNGG 5 cut(s) 122, 927, 1220, 1299, 1921
StyI CCWWGG 7 cut(s) 188, 626, 720, 904, 990, 1120, 1132
TaaI ACNGT 2 cut(s) 454, 527
TaiI ACGT 1 cut(s) 1189
TaqI TCGA 3 cut(s) 33, 1412, 1536
TatI WGTACW 1 cut(s) 1869
TauI GCSGC 1 cut(s) 594
TfiI GAWTC 1 cut(s) 85
Tru1I TTAA 6 cut(s) 263, 1377, 1605, 1710, 1847, 2007
Tru9I TTAA 6 cut(s) 263, 1377, 1605, 1710, 1847, 2007
TscAI CASTG 4 cut(s) 1160, 1509, 1670, 1739
TseFI GTSAC 4 cut(s) 163, 816, 1052, 1238
TseI GCWGC 9 cut(s) 273, 392, 594, 597, 600, 677, 698, 1546, 1831
Tsp45I GTSAC 4 cut(s) 163, 816, 1052, 1238
TspGWI ACGGA 2 cut(s) 759, 817
TspRI CASTG 4 cut(s) 1160, 1509, 1670, 1739
Van91I CCANNNNNTGG 1 cut(s) 886
VpaK11BI GGWCC 2 cut(s) 963, 1472
XagI CCTNNNNNAGG 3 cut(s) 192, 323, 625
XapI RAATTY 4 cut(s) 209, 314, 1839, 1903
XceI RCATGY 1 cut(s) 824
XcmI CCANNNNNNNNNTGG 1 cut(s) 1046
XmiI GTMKAC 2 cut(s) 1116, 1138
XmnI GAANNNNTTC 1 cut(s) 611
XspI CTAG 4 cut(s) 81, 98, 255, 923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.