Rroxscaffold_3G00264230

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0014738
Physical Location & Seq
Reverse (-)
57948450 .. 57950039
1590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00264230.1

Sequence Viewer

Length: 1590 bp
ATGGCTCCTAGCGGAAGTTTCATGACGGAGTATGAGTGCACCAATCATGAAATTAGGACTAATCGAATGAGTGGCCTTGAACTCCTTGGTCTTAATAATCATTCATCTATGGCTTGCTATTCTTATCCCTACATGCCATCACTTGAGGAGGGCAGTGCTAATGATTCTTCCTTGATCAACCCCTATTCGGATCATGAAAGCCGGGACCATAAGAAGCTGAAAAGGACTCTAAGTATTGCGGACTCAGTGTCGAGTAATAGCAGTATCAACAGCAGCATTATCAGCCGCAGCAGCAGTACTAATAGCTTGACCACCTTGCCAAGGCTTCATTTCCGGGATCATATATGGACTTACACACAAAGGTACCTTGCAGCTGAAGCTGTTGAGGAGGCGGCAGTGGCTATGATCAATGCCGAGGAAAATGGAGCTGAACAAGAAGATGGAACTGCTGATGGCATGAGGCTTGTTCAGCTGCTCATTGCTTGTGCTGAAGCTGTTGCTTGCCGCGACAAGTCACATGCATCTGCTTTACTATCCGAGCTGCGTGCCAATGCTTTGGTGTTTGGCTCTTCGTTCCAGCGTGTGGCTTCTTGCTTTGTCCAAGGCCTAGCCAGCCGGCTAGCCTTGGTTCAACCGCTCGGGACAGTTGGTTTTGTTCCATCAAAATTGAATGCGAAAGATTATGCTCTAATGGACAAGAAGGAAGAGGCATTGCGCCTTGTTTATGAAATTTGCCCACATATTCAATTTGGTCATTTTGTGGCCAACTCATCAATATTGGAAGCCCTTGAGGGAGAGAGTTTTGTTCATGTGGTAGACCTTGGGATGACCCTCGGTCTGCCACATGGCGATCAGTGGCGAGGCCTGATCCAAAGCCTCGCTACACGCGCAGGCCAGCCACCAGTGTCGCGCCTTCGGATAACTGGTGTTGGTCTGTGCGGTGACAGATTGCTAATTATAGGAGAAGAGCTTGAGGCTTATGCTGACAGCTTAGGAATAAATCTGGAGTTTTCTTGTGTAGAAAGCAACTTGGAAAACCTGAAGCCTGAAGACATCAAAATTTTTGAGGGTGAAGTACTAGTTGTCAATAGCATTCTTCAGTTGCACTGTGTGGTGAAAGAAAGCAGGGGAGCTCTCAATTCAGTTCTGCAGATGATTCATGAGCTCTCGCCAAAAATCCTAGTTCTTGTTGAGCAGGACTCTAGCCACAATGGACCCTTTTTTCTTGGGAGGTTTATGGAAGCATTGCATTACTACTCTGCAATATTTGACTCACTAGATGCAATGCTTCCCAAATACGACACGAGGCGTGCCAAGATGGAGCAATTCTACTTTGCTGAGGAGATCAAGAACATCATCAGCTGTGAGGGACCAGCACGAGTGGAGAGGCATGAGAGGGTTGATCAGTGGCGCAGGAGGATGAGCCGTGCCGGGTTTCAGGGTGCACCGATTAAGATGATGGCTCAAGCAAAACAGTGGCTAGGGAAGAACAAGGTTTGTGAGGGATACACTGTTGTGGAAGAAAAGGGTTGCTTGGTTCTTGGTTGGAAATCAAGGCCTATTGTTGCTGCTTCTTGCTGGAAATGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

529

Amino Acids

58.72

Weight (kDa)

5.86

Isoelectric Point (pI)

54.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 155 - 528 2e-113 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014738)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g07610
malus_domestica MD06G1148900.v1.1 MD14G1162800.v1.1
prunus_persica Prupe.5G156100_v2.0.a1
pyrus_communis pycom06g13830
rosa_chinensis RchiOBHm_Chr7g0190881
rosa_laevigata RLG00000004489
rosa_multiflora Rmu_sc0004443.1_g000019 Rmu_sc0006903.1_g000003
rosa_roxburghii Rroxscaffold_3G00264230
rosa_rugosa Rorug06G0507700
rosa_samantha Rh1DG013400 Rh1DG013500 Rh7AG114400 Rh7CG119900 Rh7DG118200
rosa_wichuraiana Rw7G009980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 363
AccB1I GGYRCC 1 cut(s) 363
AccB7I CCANNNNNTGG 1 cut(s) 583
AccBSI CCGCTC 1 cut(s) 637
AccI GTMKAC 1 cut(s) 816
AccII CGCG 3 cut(s) 507, 888, 910
AciI CCGC 7 cut(s) 12, 239, 286, 392, 505, 635, 939
AclWI GGATC 3 cut(s) 198, 345, 862
AcoI YGGCCR 1 cut(s) 762
AcsI RAATTY 2 cut(s) 729, 1059
AcuI CTGAAG 5 cut(s) 396, 510, 1061, 1068, 1082
AdeI CACNNNGTG 1 cut(s) 1111
AfaI GTAC 3 cut(s) 298, 365, 1077
AfiI CCNNNNNNNGG 3 cut(s) 187, 321, 583
AgsI TTSAA 4 cut(s) 80, 632, 670, 746
AhdI GACNNNNNGTC 2 cut(s) 247, 834
AhlI ACTAGT 1 cut(s) 1078
AleI CACNNNNGTG 1 cut(s) 1514
Alw21I GWGCWC 4 cut(s) 41, 1135, 1167, 1447
Alw44I GTGCAC 2 cut(s) 37, 1443
AlwI GGATC 3 cut(s) 198, 345, 862
Ama87I CYCGRG 1 cut(s) 638
AoxI GGCC 6 cut(s) 73, 604, 762, 862, 892, 1556
ApaLI GTGCAC 2 cut(s) 37, 1443
ApeKI GCWGC 7 cut(s) 273, 288, 291, 371, 472, 541, 1568
ApoI RAATTY 2 cut(s) 729, 1059
Asp718I GGTACC 1 cut(s) 363
AspLEI GCGC 4 cut(s) 717, 890, 912, 1413
AspS9I GGNCC 3 cut(s) 205, 1214, 1370
AsuC2I CCSGG 3 cut(s) 203, 335, 1432
AsuHPI GGTGA 3 cut(s) 953, 1082, 1126
AsuNHI GCTAGC 1 cut(s) 619
AvaI CYCGRG 1 cut(s) 638
AvaII GGWCC 3 cut(s) 205, 1214, 1370
BaeGI GKGCMC 2 cut(s) 41, 1447
BaeI ACNNNNGTAYC 2 cut(s) 347, 380
BalI TGGCCA 1 cut(s) 764
BanI GGYRCC 1 cut(s) 363
BanII GRGCYC 2 cut(s) 1135, 1167
BauI CACGAG 2 cut(s) 1303, 1377
BbsI GAAGAC 1 cut(s) 1056
Bbv12I GWGCWC 4 cut(s) 41, 1135, 1167, 1447
BbvCI CCTCAGC 1 cut(s) 1338
BbvI GCAGC 7 cut(s) 285, 300, 303, 383, 459, 528, 1555
BccI CCATC 6 cut(s) 145, 434, 446, 667, 1312, 1453
BceAI ACGGC 1 cut(s) 1410
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BciVI GTATCC 1 cut(s) 1499
BclI TGATCA 3 cut(s) 174, 405, 1402
BcnI CCSGG 3 cut(s) 203, 335, 1432
BcuI ACTAGT 1 cut(s) 1078
BfaI CTAG 8 cut(s) 9, 608, 620, 1079, 1181, 1203, 1277, 1481
BfmI CTRYAG 1 cut(s) 1148
BfuI GTATCC 1 cut(s) 1499
BmcAI AGTACT 2 cut(s) 298, 1077
Bme1390I CCNGG 3 cut(s) 203, 335, 1432
Bme18I GGWCC 3 cut(s) 205, 1214, 1370
BmeRI GACNNNNNGTC 2 cut(s) 247, 834
BmeT110I CYCGRG 1 cut(s) 638
BmgT120I GGNCC 3 cut(s) 205, 1214, 1370
BmiI GGNNCC 5 cut(s) 6, 206, 365, 1216, 1371
BmrFI CCNGG 3 cut(s) 203, 335, 1432
BmsI GCATC 2 cut(s) 530, 1270
BmtI GCTAGC 1 cut(s) 623
BpiI GAAGAC 1 cut(s) 1056
BplI GAGNNNNNCTC 2 cut(s) 1184, 1216
BpmI CTGGAG 1 cut(s) 1025
Bpu10I CCTNAGC 2 cut(s) 991, 1338
BpuEI CTTGAG 4 cut(s) 164, 809, 992, 1449
BpuMI CCSGG 3 cut(s) 203, 335, 1432
BsaJI CCNNGG 7 cut(s) 85, 320, 414, 601, 624, 820, 832
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 3 cut(s) 187, 321, 583
Bse118I RCCGGY 1 cut(s) 615
Bse1I ACTGG 2 cut(s) 902, 928
Bse3DI GCAATG 4 cut(s) 477, 710, 1244, 1290
BseDI CCNNGG 7 cut(s) 85, 320, 414, 601, 624, 820, 832
BseGI GGATG 2 cut(s) 831, 1425
BseLI CCNNNNNNNGG 3 cut(s) 187, 321, 583
BseMI GCAATG 4 cut(s) 477, 710, 1244, 1290
BseMII CTCAG 2 cut(s) 258, 1329
BseNI ACTGG 2 cut(s) 902, 928
BseRI GAGGAG 3 cut(s) 161, 401, 1355
BseSI GKGCMC 2 cut(s) 41, 1447
BseXI GCAGC 7 cut(s) 285, 300, 303, 383, 459, 528, 1555
Bsh1236I CGCG 3 cut(s) 507, 888, 910
BshFI GGCC 6 cut(s) 75, 606, 764, 864, 894, 1558
BshNI GGYRCC 1 cut(s) 363
BsiHKAI GWGCWC 4 cut(s) 41, 1135, 1167, 1447
BsiHKCI CYCGRG 1 cut(s) 638
BsiSI CCGG 4 cut(s) 202, 334, 616, 1431
BslFI GGGAC 3 cut(s) 218, 655, 1383
BslI CCNNNNNNNGG 3 cut(s) 187, 321, 583
BsmFI GGGAC 3 cut(s) 218, 655, 1383
BsmI GAATGC 2 cut(s) 676, 1092
BsnI GGCC 6 cut(s) 75, 606, 764, 864, 894, 1558
BsoBI CYCGRG 1 cut(s) 638
Bsp1286I GDGCHC 4 cut(s) 41, 1135, 1167, 1447
Bsp143I GATC 8 cut(s) 174, 190, 337, 405, 850, 867, 1344, 1402
BspACI CCGC 7 cut(s) 12, 239, 286, 392, 505, 635, 939
BspANI GGCC 6 cut(s) 75, 606, 764, 864, 894, 1558
BspCNI CTCAG 2 cut(s) 257, 1330
BspFNI CGCG 3 cut(s) 507, 888, 910
BspHI TCATGA 4 cut(s) 21, 46, 193, 1159
BspLI GGNNCC 5 cut(s) 6, 206, 365, 1216, 1371
BspMAI CTGCAG 1 cut(s) 1152
BspOI GCTAGC 1 cut(s) 623
BspPI GGATC 3 cut(s) 198, 345, 862
BspQI GCTCTTC 2 cut(s) 574, 960
BspT107I GGYRCC 1 cut(s) 363
BsrBI CCGCTC 1 cut(s) 637
BsrDI GCAATG 4 cut(s) 477, 710, 1244, 1290
BsrFI RCCGGY 1 cut(s) 615
BsrI ACTGG 2 cut(s) 902, 928
BssAI RCCGGY 1 cut(s) 615
BssECI CCNNGG 7 cut(s) 85, 320, 414, 601, 624, 820, 832
BssMI GATC 8 cut(s) 174, 190, 337, 405, 850, 867, 1344, 1402
BssSI CACGAG 2 cut(s) 1303, 1377
BssT1I CCWWGG 5 cut(s) 85, 320, 601, 624, 820
Bst2BI CACGAG 2 cut(s) 1303, 1377
Bst4CI ACNGT 4 cut(s) 646, 1109, 1476, 1513
Bst6I CTCTTC 3 cut(s) 574, 699, 960
BstC8I GCNNGC 9 cut(s) 115, 502, 546, 613, 617, 621, 892, 896, 1311
BstDEI CTNAG 4 cut(s) 230, 244, 991, 1338
BstENI CCTNNNNNAGG 1 cut(s) 319
BstF5I GGATG 2 cut(s) 831, 1425
BstFNI CGCG 3 cut(s) 507, 888, 910
BstHHI GCGC 4 cut(s) 717, 890, 912, 1413
BstKTI GATC 8 cut(s) 177, 193, 340, 408, 853, 870, 1347, 1405
BstMBI GATC 8 cut(s) 174, 190, 337, 405, 850, 867, 1344, 1402
BstMWI GCNNNNNNNGC 8 cut(s) 282, 291, 377, 398, 469, 612, 887, 1584
BstNSI RCATGY 2 cut(s) 136, 521
BstSCI CCNGG 3 cut(s) 201, 333, 1430
BstSFI CTRYAG 1 cut(s) 1148
BstSLI GKGCMC 2 cut(s) 41, 1447
BstUI CGCG 3 cut(s) 507, 888, 910
BstV1I GCAGC 7 cut(s) 285, 300, 303, 383, 459, 528, 1555
BstV2I GAAGAC 1 cut(s) 1056
BstXI CCANNNNNNTGG 1 cut(s) 556
BsuI GTATCC 1 cut(s) 1499
BsuRI GGCC 6 cut(s) 75, 606, 764, 864, 894, 1558
BtsCI GGATG 2 cut(s) 831, 1425
BtsI GCAGTG 2 cut(s) 160, 402
BtsIMutI CAGTG 9 cut(s) 160, 252, 402, 860, 909, 1105, 1412, 1481, 1509
Cac8I GCNNGC 9 cut(s) 115, 502, 546, 613, 617, 621, 892, 896, 1311
CciI TCATGA 4 cut(s) 21, 46, 193, 1159
CfoI GCGC 4 cut(s) 717, 890, 912, 1413
Cfr10I RCCGGY 1 cut(s) 615
Cfr13I GGNCC 3 cut(s) 205, 1214, 1370
Csp6I GTAC 3 cut(s) 297, 364, 1076
CviQI GTAC 3 cut(s) 297, 364, 1076
DdeI CTNAG 4 cut(s) 230, 244, 991, 1338
DpnI GATC 8 cut(s) 176, 192, 339, 407, 852, 869, 1346, 1404
DpnII GATC 8 cut(s) 174, 190, 337, 405, 850, 867, 1344, 1402
DraIII CACNNNGTG 1 cut(s) 1111
DriI GACNNNNNGTC 2 cut(s) 247, 834
EaeI YGGCCR 1 cut(s) 762
Eam1104I CTCTTC 3 cut(s) 574, 699, 960
Eam1105I GACNNNNNGTC 2 cut(s) 247, 834
EarI CTCTTC 3 cut(s) 574, 699, 960
Ecl136II GAGCTC 2 cut(s) 1133, 1165
Eco130I CCWWGG 5 cut(s) 85, 320, 601, 624, 820
Eco147I AGGCCT 3 cut(s) 606, 864, 1558
Eco24I GRGCYC 2 cut(s) 1135, 1167
Eco47I GGWCC 3 cut(s) 205, 1214, 1370
Eco53kI GAGCTC 2 cut(s) 1133, 1165
Eco57I CTGAAG 5 cut(s) 396, 510, 1061, 1068, 1082
Eco88I CYCGRG 1 cut(s) 638
EcoICRI GAGCTC 2 cut(s) 1133, 1165
EcoNI CCTNNNNNAGG 1 cut(s) 319
EcoT14I CCWWGG 5 cut(s) 85, 320, 601, 624, 820
EcoT22I ATGCAT 1 cut(s) 523
EcoT38I GRGCYC 2 cut(s) 1135, 1167
ErhI CCWWGG 5 cut(s) 85, 320, 601, 624, 820
FalI AAGNNNNNCTT 2 cut(s) 1517, 1549
FaqI GGGAC 3 cut(s) 218, 655, 1383
FbaI TGATCA 3 cut(s) 174, 405, 1402
FblI GTMKAC 1 cut(s) 816
FokI GGATG 2 cut(s) 838, 1432
FriOI GRGCYC 2 cut(s) 1135, 1167
FspBI CTAG 8 cut(s) 9, 608, 620, 1079, 1181, 1203, 1277, 1481
GlaI GCGC 4 cut(s) 716, 889, 911, 1412
GsuI CTGGAG 1 cut(s) 1025
HaeIII GGCC 6 cut(s) 75, 606, 764, 864, 894, 1558
HapII CCGG 4 cut(s) 202, 334, 616, 1431
HhaI GCGC 4 cut(s) 717, 890, 912, 1413
Hin6I GCGC 4 cut(s) 715, 888, 910, 1411
HinP1I GCGC 4 cut(s) 715, 888, 910, 1411
HinfI GANTC 6 cut(s) 164, 226, 242, 1156, 1199, 1271
HpaII CCGG 4 cut(s) 202, 334, 616, 1431
HphI GGTGA 3 cut(s) 953, 1082, 1126
Hpy166II GTNNAC 3 cut(s) 39, 817, 1445
Hpy188I TCNGA 3 cut(s) 190, 538, 918
Hpy188III TCNNGA 7 cut(s) 22, 47, 194, 640, 1004, 1160, 1348
Hpy8I GTNNAC 3 cut(s) 39, 817, 1445
HpyAV CCTTC 2 cut(s) 694, 923
HpyCH4III ACNGT 4 cut(s) 646, 1109, 1476, 1513
HpyCH4V TGCA 9 cut(s) 39, 371, 521, 1105, 1150, 1249, 1262, 1283, 1445
HpyF10VI GCNNNNNNNGC 8 cut(s) 282, 291, 377, 398, 469, 612, 887, 1584
HpyF3I CTNAG 4 cut(s) 230, 244, 991, 1338
HspAI GCGC 4 cut(s) 715, 888, 910, 1411
KpnI GGTACC 1 cut(s) 367
KroI GCCGGC 1 cut(s) 615
KroNI GCCGGC 1 cut(s) 617
Ksp22I TGATCA 3 cut(s) 174, 405, 1402
Kzo9I GATC 8 cut(s) 174, 190, 337, 405, 850, 867, 1344, 1402
LguI GCTCTTC 2 cut(s) 574, 960
LmnI GCTCC 4 cut(s) 10, 425, 1130, 1321
Lsp1109I GCAGC 7 cut(s) 285, 300, 303, 383, 459, 528, 1555
LweI GCATC 2 cut(s) 530, 1270
MaeI CTAG 8 cut(s) 9, 608, 620, 1079, 1181, 1203, 1277, 1481
MaeIII GTNAC 2 cut(s) 513, 941
MalI GATC 8 cut(s) 176, 192, 339, 407, 852, 869, 1346, 1404
MbiI CCGCTC 1 cut(s) 637
MboI GATC 8 cut(s) 174, 190, 337, 405, 850, 867, 1344, 1402
MboII GAAGA 9 cut(s) 159, 449, 561, 716, 977, 1061, 1088, 1498, 1532
MhlI GDGCHC 4 cut(s) 41, 1135, 1167, 1447
MlsI TGGCCA 1 cut(s) 764
MluCI AATT 8 cut(s) 51, 665, 729, 746, 954, 1059, 1138, 1325
MluNI TGGCCA 1 cut(s) 764
MlyI GAGTC 4 cut(s) 220, 236, 1193, 1265
MmeI TCCRAC 1 cut(s) 1526
Mox20I TGGCCA 1 cut(s) 764
Mph1103I ATGCAT 1 cut(s) 523
MroNI GCCGGC 1 cut(s) 615
MscI TGGCCA 1 cut(s) 764
MseI TTAA 2 cut(s) 93, 1452
MslI CAYNNNNRTG 1 cut(s) 1514
Msp20I TGGCCA 1 cut(s) 764
MspA1I CMGCKG 3 cut(s) 374, 472, 1362
MspI CCGG 4 cut(s) 202, 334, 616, 1431
MspR9I CCNGG 3 cut(s) 203, 335, 1432
Mva1269I GAATGC 2 cut(s) 676, 1092
MvnI CGCG 3 cut(s) 507, 888, 910
MwoI GCNNNNNNNGC 8 cut(s) 282, 291, 377, 398, 469, 612, 887, 1584
NaeI GCCGGC 1 cut(s) 617
NciI CCSGG 3 cut(s) 203, 335, 1432
NdeII GATC 8 cut(s) 174, 190, 337, 405, 850, 867, 1344, 1402
NgoMIV GCCGGC 1 cut(s) 615
NheI GCTAGC 1 cut(s) 619
NlaIV GGNNCC 5 cut(s) 6, 206, 365, 1216, 1371
NmeAIII GCCGAG 1 cut(s) 439
NmuCI GTSAC 2 cut(s) 513, 941
NsiI ATGCAT 1 cut(s) 523
NspI RCATGY 2 cut(s) 136, 521
OliI CACNNNNGTG 1 cut(s) 1514
PagI TCATGA 4 cut(s) 21, 46, 193, 1159
PceI AGGCCT 3 cut(s) 606, 864, 1558
PciSI GCTCTTC 2 cut(s) 574, 960
PctI GAATGC 2 cut(s) 676, 1092
PdiI GCCGGC 1 cut(s) 617
PfeI GAWTC 2 cut(s) 164, 1156
PflMI CCANNNNNTGG 1 cut(s) 583
PfoI TCCNGGA 1 cut(s) 333
PleI GAGTC 4 cut(s) 220, 236, 1193, 1265
PpsI GAGTC 4 cut(s) 220, 236, 1193, 1265
Psp124BI GAGCTC 2 cut(s) 1135, 1167
PspN4I GGNNCC 5 cut(s) 6, 206, 365, 1216, 1371
PspPI GGNCC 3 cut(s) 205, 1214, 1370
PstI CTGCAG 1 cut(s) 1152
PvuII CAGCTG 3 cut(s) 374, 472, 1362
RsaI GTAC 3 cut(s) 298, 365, 1077
RsaNI GTAC 3 cut(s) 297, 364, 1076
RseI CAYNNNNRTG 1 cut(s) 1514
SacI GAGCTC 2 cut(s) 1135, 1167
SapI GCTCTTC 2 cut(s) 574, 960
SaqAI TTAA 2 cut(s) 93, 1452
Sau3AI GATC 8 cut(s) 174, 190, 337, 405, 850, 867, 1344, 1402
Sau96I GGNCC 3 cut(s) 205, 1214, 1370
ScaI AGTACT 2 cut(s) 298, 1077
SchI GAGTC 4 cut(s) 220, 236, 1193, 1265
ScrFI CCNGG 3 cut(s) 203, 335, 1432
SduI GDGCHC 4 cut(s) 41, 1135, 1167, 1447
SfaNI GCATC 2 cut(s) 530, 1270
SfcI CTRYAG 1 cut(s) 1148
SinI GGWCC 3 cut(s) 205, 1214, 1370
SmiMI CAYNNNNRTG 1 cut(s) 1514
SmlI CTYRAG 4 cut(s) 143, 788, 971, 1464
SmoI CTYRAG 4 cut(s) 143, 788, 971, 1464
SpeI ACTAGT 1 cut(s) 1078
Sse9I AATT 8 cut(s) 51, 665, 729, 746, 954, 1059, 1138, 1325
SseBI AGGCCT 3 cut(s) 606, 864, 1558
SsiI CCGC 7 cut(s) 12, 239, 286, 392, 505, 635, 939
SspI AATATT 2 cut(s) 777, 1266
SspMI CTAG 8 cut(s) 9, 608, 620, 1079, 1181, 1203, 1277, 1481
SstI GAGCTC 2 cut(s) 1135, 1167
StuI AGGCCT 3 cut(s) 606, 864, 1558
StyD4I CCNGG 3 cut(s) 201, 333, 1430
StyI CCWWGG 5 cut(s) 85, 320, 601, 624, 820
TaaI ACNGT 4 cut(s) 646, 1109, 1476, 1513
TaqI TCGA 2 cut(s) 64, 251
TaqII GACCGA 1 cut(s) 824
TasI AATT 8 cut(s) 51, 665, 729, 746, 954, 1059, 1138, 1325
TatI WGTACW 2 cut(s) 296, 1075
TauI GCSGC 3 cut(s) 288, 395, 507
TfiI GAWTC 2 cut(s) 164, 1156
Tru1I TTAA 2 cut(s) 93, 1452
Tru9I TTAA 2 cut(s) 93, 1452
TscAI CASTG 9 cut(s) 160, 252, 402, 860, 909, 1112, 1412, 1481, 1516
TseFI GTSAC 2 cut(s) 513, 941
TseI GCWGC 7 cut(s) 273, 288, 291, 371, 472, 541, 1568
Tsp45I GTSAC 2 cut(s) 513, 941
TspDTI ATGAA 8 cut(s) 10, 63, 93, 210, 317, 741, 797, 1148
TspGWI ACGGA 1 cut(s) 41
TspRI CASTG 9 cut(s) 160, 252, 402, 860, 909, 1112, 1412, 1481, 1516
Van91I CCANNNNNTGG 1 cut(s) 583
VneI GTGCAC 2 cut(s) 37, 1443
VpaK11BI GGWCC 3 cut(s) 205, 1214, 1370
XagI CCTNNNNNAGG 1 cut(s) 319
XapI RAATTY 2 cut(s) 729, 1059
XceI RCATGY 2 cut(s) 136, 521
XmiI GTMKAC 1 cut(s) 816
XspI CTAG 8 cut(s) 9, 608, 620, 1079, 1181, 1203, 1277, 1481
ZrmI AGTACT 2 cut(s) 298, 1077
Zsp2I ATGCAT 1 cut(s) 523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.