pycom06g15390

Triose phosphate phosphate translocator, non-green plastid

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
19924576 .. 19928152
3577 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g15390.8

Sequence Viewer

Length: 1236 bp
ATGCAGAGCGCTACCTTCACTCTCACGCCGTCCCTCCGCCTTCCGAAGCCTCGGAGGCCGTCGGCGAGCCCCGCCGTGAACTCTAGGTTCGATCCGATACGCATTTCGGCCTCCTCGAAGCCGCACAATTTCAATGATGCGCTCTCCGCTTCTCTGCCGCGCCGATCCTGGTCTCTGTCATCGTCTTCCTCTGATTTCAAGCTCAGGCCGTGGACGTCCGTACCGTTAGTCGATTCCGATGCCGGAACGAAGCGTTTTGAGGTTCGGGCCACTGCGGAGACCGCCGAAGAGAGCACTGAATCTGGAAGCAGCTTGTTCAAAACGCTTGAGCTCGGGGCGTTGTTTGGCCTCTGGTTCCTCTTCAACATCTGGTTCAATATCTACAACAAGCAGGTCTTGAAGGTGTTCCCATACCCAGTAACTGTCACTGGAATACAATTTGCTGTTGGGACTGTGCTTGTTCTGCTTATGTGGGGTTTGAATCTGTACAAGAAACCGAGAGTTAGTGGTGCACAGCTCGCAGCAATTCTTCCACTGGCGATTGTGCATACTTTGGGTAACCTTTTTACTAATATGAGTCTTGGGAAAGTGGCTGTCTCGTTTACTCACACAATCAAAGCTAGTGAACCCTTTTTCTCAGTTATCCTCTCAGCCATGTTTCTCGGGGAGATACCCACTCCATGGGTGGTTGCTTCATTGATACCAATCGTTGGTGGAGTGGGACTGGCTTCAATTACTGAGGTCTCATTTAATTGGGCTGGATTTTGGAGTGCTATGGCTTCCAACTTGACAAACCAATCTCGTAACGTCCTTAGCAAAAAGGTCATGGTTAAGAAAGAGGCAAATATGGACAACATTACACTCTTCTCAATTATAACAGTCATGTCCTTTTTCTTGTTAACTCCTGTGGGTATCTTCATGGAAGGGGTGAAATTTACTCCAGCAGTCCTGCAATCTGCTGGTCTGAATGTAAAACAATTATATATTAGGTCTTTCATTGCTGCACTCTGCTTCCACGCATATCAGCAGGTTTCGTACATGATATTGCAGAGGGTATCACCTGTTACTCATTCTGTGGGTAATTGCGTGAAGCGTGTGGTGGTTATTGTGAGCTCTGTTCTCTTCTTCAGGACACCCGTTTCACCTATTAATGCTCTCGGCACCGGAGTGGCGCTTGCCGGAGTTTTCCTATATTCAAGGGTGAAGCGTATAAAATCCAAGCCGAAGAGCGCTTGA

Protein Analysis

412

Amino Acids

44.94

Weight (kDa)

10.33

Isoelectric Point (pI)

42.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012865)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 875
AatII GACGTC 1 cut(s) 218
Acc36I ACCTGC 2 cut(s) 382, 1018
AccB1I GGYRCC 1 cut(s) 1160
AccB7I CCANNNNNTGG 2 cut(s) 681, 710
AccII CGCG 1 cut(s) 160
AciI CCGC 7 cut(s) 37, 72, 122, 147, 158, 275, 282
AclWI GGATC 2 cut(s) 86, 159
AcsI RAATTY 1 cut(s) 932
AcuI CTGAAG 1 cut(s) 1111
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 3 cut(s) 222, 488, 1037
AfeI AGCGCT 2 cut(s) 10, 1231
AfiI CCNNNNNNNGG 2 cut(s) 681, 710
AgsI TTSAA 9 cut(s) 133, 199, 319, 364, 376, 400, 481, 732, 1197
AjnI CCWGG 1 cut(s) 167
AleI CACNNNNGTG 1 cut(s) 1166
AluBI AGCT 6 cut(s) 202, 312, 331, 517, 620, 1113
AluI AGCT 6 cut(s) 202, 312, 331, 517, 620, 1113
Alw21I GWGCWC 4 cut(s) 296, 333, 514, 1115
Alw26I GTCTC 4 cut(s) 177, 272, 601, 748
Alw44I GTGCAC 1 cut(s) 510
AlwI GGATC 2 cut(s) 86, 159
AlwNI CAGNNNCTG 1 cut(s) 422
Ama87I CYCGRG 2 cut(s) 332, 662
Aor51HI AGCGCT 2 cut(s) 10, 1231
AoxI GGCC 5 cut(s) 56, 108, 206, 267, 346
ApaLI GTGCAC 1 cut(s) 510
ApeKI GCWGC 3 cut(s) 309, 521, 1001
ApoI RAATTY 1 cut(s) 932
AseI ATTAAT 1 cut(s) 1149
Asp700I GAANNNNTTC 1 cut(s) 404
AspLEI GCGC 5 cut(s) 11, 142, 162, 1174, 1232
AspS9I GGNCC 1 cut(s) 267
AsuHPI GGTGA 4 cut(s) 940, 1050, 1134, 1213
AvaI CYCGRG 2 cut(s) 332, 662
BaeGI GKGCMC 1 cut(s) 514
BaeI ACNNNNGTAYC 2 cut(s) 204, 237
BanI GGYRCC 1 cut(s) 1160
BanII GRGCYC 3 cut(s) 71, 333, 1115
BbsI GAAGAC 1 cut(s) 177
Bbv12I GWGCWC 4 cut(s) 296, 333, 514, 1115
BbvI GCAGC 3 cut(s) 321, 533, 988
BceAI ACGGC 4 cut(s) 13, 43, 59, 193
BcgI CGANNNNNNTGC 2 cut(s) 221, 255
BciT130I CCWGG 1 cut(s) 169
BcoDI GTCTC 4 cut(s) 177, 272, 601, 748
BfaI CTAG 2 cut(s) 84, 621
BfoI RGCGCY 3 cut(s) 12, 1175, 1233
BfuAI ACCTGC 2 cut(s) 382, 1018
BglI GCCNNNNNGGC 1 cut(s) 55
BisI GCNGC 5 cut(s) 122, 158, 310, 522, 1002
BlsI GCNGC 5 cut(s) 123, 159, 311, 523, 1003
Bme1390I CCNGG 1 cut(s) 169
BmeT110I CYCGRG 2 cut(s) 332, 662
BmgT120I GGNCC 1 cut(s) 267
BmiI GGNNCC 2 cut(s) 356, 1162
BmrFI CCNGG 1 cut(s) 169
BmrI ACTGGG 1 cut(s) 410
BmsI GCATC 2 cut(s) 127, 229
BmuI ACTGGG 1 cut(s) 410
BpiI GAAGAC 1 cut(s) 177
BpmI CTGGAG 1 cut(s) 924
Bpu10I CCTNAGC 2 cut(s) 203, 812
BpuEI CTTGAG 1 cut(s) 347
BsaBI GATNNNNATC 1 cut(s) 704
BsaHI GRCGYC 1 cut(s) 215
BsaI GGTCTC 3 cut(s) 177, 272, 748
BsaJI CCNNGG 3 cut(s) 50, 209, 680
BsaWI WCCGGW 1 cut(s) 1163
Bsc4I CCNNNNNNNGG 2 cut(s) 681, 710
Bse1I ACTGG 4 cut(s) 416, 433, 540, 729
Bse3DI GCAATG 1 cut(s) 996
Bse8I GATNNNNATC 1 cut(s) 704
BseBI CCWGG 1 cut(s) 169
BseDI CCNNGG 3 cut(s) 50, 209, 680
BseJI GATNNNNATC 1 cut(s) 704
BseLI CCNNNNNNNGG 2 cut(s) 681, 710
BseMI GCAATG 1 cut(s) 996
BseMII CTCAG 4 cut(s) 217, 651, 663, 729
BseNI ACTGG 4 cut(s) 416, 433, 540, 729
BseRI GAGGAG 1 cut(s) 103
BseSI GKGCMC 1 cut(s) 514
BseXI GCAGC 3 cut(s) 321, 533, 988
BsgI GTGCAG 1 cut(s) 987
Bsh1236I CGCG 1 cut(s) 160
BshFI GGCC 5 cut(s) 58, 110, 208, 269, 348
BshNI GGYRCC 1 cut(s) 1160
BsiHKAI GWGCWC 4 cut(s) 296, 333, 514, 1115
BsiHKCI CYCGRG 2 cut(s) 332, 662
BsiSI CCGG 3 cut(s) 243, 1164, 1179
BslFI GGGAC 3 cut(s) 16, 463, 735
BslI CCNNNNNNNGG 2 cut(s) 681, 710
BsmAI GTCTC 4 cut(s) 177, 272, 601, 748
BsmFI GGGAC 3 cut(s) 16, 463, 735
BsnI GGCC 5 cut(s) 58, 110, 208, 269, 348
Bso31I GGTCTC 3 cut(s) 177, 272, 748
BsoBI CYCGRG 2 cut(s) 332, 662
Bsp1286I GDGCHC 5 cut(s) 71, 296, 333, 514, 1115
Bsp1407I TGTACA 1 cut(s) 486
Bsp143I GATC 2 cut(s) 91, 164
Bsp19I CCATGG 1 cut(s) 680
BspACI CCGC 7 cut(s) 37, 72, 122, 147, 158, 275, 282
BspANI GGCC 5 cut(s) 58, 110, 208, 269, 348
BspCNI CTCAG 4 cut(s) 216, 650, 662, 730
BspFNI CGCG 1 cut(s) 160
BspLI GGNNCC 2 cut(s) 356, 1162
BspMI ACCTGC 2 cut(s) 382, 1018
BspPI GGATC 2 cut(s) 86, 159
BspQI GCTCTTC 1 cut(s) 1220
BspT107I GGYRCC 1 cut(s) 1160
BspTNI GGTCTC 3 cut(s) 177, 272, 748
BsrDI GCAATG 1 cut(s) 996
BsrGI TGTACA 1 cut(s) 486
BsrI ACTGG 4 cut(s) 416, 433, 540, 729
BssECI CCNNGG 3 cut(s) 50, 209, 680
BssMI GATC 2 cut(s) 91, 164
BssNI GRCGYC 1 cut(s) 215
BssT1I CCWWGG 1 cut(s) 680
Bst2UI CCWGG 1 cut(s) 169
Bst4CI ACNGT 4 cut(s) 225, 424, 454, 880
Bst6I CTCTTC 5 cut(s) 282, 365, 869, 1127, 1220
BstACI GRCGYC 1 cut(s) 215
BstAUI TGTACA 1 cut(s) 486
BstC8I GCNNGC 3 cut(s) 67, 519, 1176
BstDEI CTNAG 5 cut(s) 203, 637, 649, 738, 812
BstDSI CCRYGG 2 cut(s) 209, 680
BstEII GGTNACC 1 cut(s) 557
BstFNI CGCG 1 cut(s) 160
BstH2I RGCGCY 3 cut(s) 12, 1175, 1233
BstHHI GCGC 5 cut(s) 11, 142, 162, 1174, 1232
BstKTI GATC 2 cut(s) 94, 167
BstMAI GTCTC 4 cut(s) 177, 272, 601, 748
BstMBI GATC 2 cut(s) 91, 164
BstMWI GCNNNNNNNGC 6 cut(s) 55, 71, 146, 281, 463, 518
BstNI CCWGG 1 cut(s) 169
BstPI GGTNACC 1 cut(s) 557
BstSCI CCNGG 1 cut(s) 167
BstSLI GKGCMC 1 cut(s) 514
BstUI CGCG 1 cut(s) 160
BstV1I GCAGC 3 cut(s) 321, 533, 988
BstV2I GAAGAC 1 cut(s) 177
BsuRI GGCC 5 cut(s) 58, 110, 208, 269, 348
BtgI CCRYGG 2 cut(s) 209, 680
BtsI GCAGTG 1 cut(s) 270
BtsIMutI CAGTG 4 cut(s) 270, 294, 426, 533
BveI ACCTGC 2 cut(s) 382, 1018
Cac8I GCNNGC 3 cut(s) 67, 519, 1176
CaiI CAGNNNCTG 1 cut(s) 422
CfoI GCGC 5 cut(s) 11, 142, 162, 1174, 1232
Cfr13I GGNCC 1 cut(s) 267
Csp6I GTAC 3 cut(s) 221, 487, 1036
CviAII CATG 6 cut(s) 655, 681, 826, 883, 919, 1039
CviQI GTAC 3 cut(s) 221, 487, 1036
DdeI CTNAG 5 cut(s) 203, 637, 649, 738, 812
DpnI GATC 2 cut(s) 93, 166
DpnII GATC 2 cut(s) 91, 164
Eam1104I CTCTTC 5 cut(s) 282, 365, 869, 1127, 1220
EarI CTCTTC 5 cut(s) 282, 365, 869, 1127, 1220
EciI GGCGGA 1 cut(s) 26
Ecl136II GAGCTC 2 cut(s) 331, 1113
Eco130I CCWWGG 1 cut(s) 680
Eco24I GRGCYC 3 cut(s) 71, 333, 1115
Eco31I GGTCTC 3 cut(s) 177, 272, 748
Eco47III AGCGCT 2 cut(s) 10, 1231
Eco53kI GAGCTC 2 cut(s) 331, 1113
Eco57I CTGAAG 1 cut(s) 1111
Eco88I CYCGRG 2 cut(s) 332, 662
Eco91I GGTNACC 1 cut(s) 557
EcoICRI GAGCTC 2 cut(s) 331, 1113
EcoO65I GGTNACC 1 cut(s) 557
EcoRII CCWGG 1 cut(s) 167
EcoT14I CCWWGG 1 cut(s) 680
EcoT38I GRGCYC 3 cut(s) 71, 333, 1115
ErhI CCWWGG 1 cut(s) 680
FaeI CATG 6 cut(s) 658, 684, 829, 886, 922, 1042
FalI AAGNNNNNCTT 2 cut(s) 380, 412
FaqI GGGAC 3 cut(s) 16, 463, 735
FatI CATG 6 cut(s) 654, 680, 825, 882, 918, 1038
FauI CCCGC 1 cut(s) 79
Fnu4HI GCNGC 5 cut(s) 122, 158, 310, 522, 1002
FriOI GRGCYC 3 cut(s) 71, 333, 1115
Fsp4HI GCNGC 5 cut(s) 122, 158, 310, 522, 1002
FspBI CTAG 2 cut(s) 84, 621
GlaI GCGC 5 cut(s) 10, 141, 161, 1173, 1231
GluI GCNGC 5 cut(s) 122, 158, 310, 522, 1002
GsuI CTGGAG 1 cut(s) 924
HaeII RGCGCY 3 cut(s) 12, 1175, 1233
HaeIII GGCC 5 cut(s) 58, 110, 208, 269, 348
HapII CCGG 3 cut(s) 243, 1164, 1179
HhaI GCGC 5 cut(s) 11, 142, 162, 1174, 1232
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 6 cut(s) 658, 684, 829, 886, 922, 1042
Hin6I GCGC 5 cut(s) 9, 140, 160, 1172, 1230
HinP1I GCGC 5 cut(s) 9, 140, 160, 1172, 1230
HincII GTYRAC 1 cut(s) 900
HindII GTYRAC 1 cut(s) 900
HinfI GANTC 4 cut(s) 233, 299, 481, 577
HpaI GTTAAC 1 cut(s) 900
HpaII CCGG 3 cut(s) 243, 1164, 1179
HphI GGTGA 4 cut(s) 940, 1050, 1134, 1213
Hpy166II GTNNAC 6 cut(s) 79, 213, 512, 603, 626, 900
Hpy188I TCNGA 6 cut(s) 45, 54, 96, 193, 238, 966
Hpy188III TCNNGA 3 cut(s) 303, 397, 1129
Hpy8I GTNNAC 6 cut(s) 79, 213, 512, 603, 626, 900
Hpy99I CGWCG 1 cut(s) 64
HpyAV CCTTC 4 cut(s) 25, 50, 394, 917
HpyCH4III ACNGT 4 cut(s) 225, 424, 454, 880
HpyCH4IV ACGT 2 cut(s) 215, 807
HpyCH4V TGCA 6 cut(s) 4, 512, 547, 952, 1004, 1048
HpyF10VI GCNNNNNNNGC 6 cut(s) 55, 71, 146, 281, 463, 518
HpyF3I CTNAG 5 cut(s) 203, 637, 649, 738, 812
HpySE526I ACGT 2 cut(s) 215, 807
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 6 cut(s) 658, 684, 829, 886, 922, 1042
HspAI GCGC 5 cut(s) 9, 140, 160, 1172, 1230
KspAI GTTAAC 1 cut(s) 900
Kzo9I GATC 2 cut(s) 91, 164
LguI GCTCTTC 1 cut(s) 1220
Lsp1109I GCAGC 3 cut(s) 321, 533, 988
LweI GCATC 2 cut(s) 127, 229
MaeI CTAG 2 cut(s) 84, 621
MaeII ACGT 2 cut(s) 215, 807
MaeIII GTNAC 5 cut(s) 418, 424, 557, 803, 1063
MalI GATC 2 cut(s) 93, 166
MboI GATC 2 cut(s) 91, 164
MboII GAAGA 8 cut(s) 177, 299, 352, 521, 856, 907, 1114, 1117
MhlI GDGCHC 5 cut(s) 71, 296, 333, 514, 1115
MluCI AATT 9 cut(s) 127, 437, 525, 732, 751, 870, 932, 977, 1081
MlyI GAGTC 1 cut(s) 586
MmeI TCCRAC 1 cut(s) 807
MroXI GAANNNNTTC 1 cut(s) 404
MseI TTAA 4 cut(s) 750, 831, 899, 1149
MslI CAYNNNNRTG 1 cut(s) 1166
MspI CCGG 3 cut(s) 243, 1164, 1179
MspR9I CCNGG 1 cut(s) 169
MvaI CCWGG 1 cut(s) 169
MvnI CGCG 1 cut(s) 160
MwoI GCNNNNNNNGC 6 cut(s) 55, 71, 146, 281, 463, 518
NcoI CCATGG 1 cut(s) 680
NdeII GATC 2 cut(s) 91, 164
NlaIII CATG 6 cut(s) 658, 684, 829, 886, 922, 1042
NlaIV GGNNCC 2 cut(s) 356, 1162
NmeAIII GCCGAG 1 cut(s) 1137
NmuCI GTSAC 1 cut(s) 424
OliI CACNNNNGTG 1 cut(s) 1166
PciSI GCTCTTC 1 cut(s) 1220
PcsI WCGNNNNNNNCGW 2 cut(s) 113, 221
PdmI GAANNNNTTC 1 cut(s) 404
PfeI GAWTC 3 cut(s) 233, 299, 481
PflMI CCANNNNNTGG 2 cut(s) 681, 710
PkrI GCNGC 5 cut(s) 123, 159, 311, 523, 1003
PleI GAGTC 1 cut(s) 585
PpsI GAGTC 1 cut(s) 585
PshBI ATTAAT 1 cut(s) 1149
PsiI TTATAA 1 cut(s) 875
Psp124BI GAGCTC 2 cut(s) 333, 1115
Psp6I CCWGG 1 cut(s) 167
PspEI GGTNACC 1 cut(s) 557
PspGI CCWGG 1 cut(s) 167
PspN4I GGNNCC 2 cut(s) 356, 1162
PspPI GGNCC 1 cut(s) 267
PstNI CAGNNNCTG 1 cut(s) 422
RsaI GTAC 3 cut(s) 222, 488, 1037
RsaNI GTAC 3 cut(s) 221, 487, 1036
RseI CAYNNNNRTG 1 cut(s) 1166
SacI GAGCTC 2 cut(s) 333, 1115
SapI GCTCTTC 1 cut(s) 1220
SaqAI TTAA 4 cut(s) 750, 831, 899, 1149
SatI GCNGC 5 cut(s) 122, 158, 310, 522, 1002
Sau3AI GATC 2 cut(s) 91, 164
Sau96I GGNCC 1 cut(s) 267
SchI GAGTC 1 cut(s) 586
ScrFI CCNGG 1 cut(s) 169
SduI GDGCHC 5 cut(s) 71, 296, 333, 514, 1115
SfaNI GCATC 2 cut(s) 127, 229
SmiMI CAYNNNNRTG 1 cut(s) 1166
SmlI CTYRAG 1 cut(s) 326
SmoI CTYRAG 1 cut(s) 326
Sse9I AATT 9 cut(s) 127, 437, 525, 732, 751, 870, 932, 977, 1081
SsiI CCGC 7 cut(s) 37, 72, 122, 147, 158, 275, 282
SspMI CTAG 2 cut(s) 84, 621
SstI GAGCTC 2 cut(s) 333, 1115
StyD4I CCNGG 1 cut(s) 167
StyI CCWWGG 1 cut(s) 680
TaaI ACNGT 4 cut(s) 225, 424, 454, 880
TaiI ACGT 2 cut(s) 218, 810
TaqI TCGA 3 cut(s) 90, 116, 231
TasI AATT 9 cut(s) 127, 437, 525, 732, 751, 870, 932, 977, 1081
TatI WGTACW 1 cut(s) 486
TauI GCSGC 2 cut(s) 124, 160
TfiI GAWTC 3 cut(s) 233, 299, 481
Tru1I TTAA 4 cut(s) 750, 831, 899, 1149
Tru9I TTAA 4 cut(s) 750, 831, 899, 1149
TscAI CASTG 4 cut(s) 277, 301, 433, 540
TseFI GTSAC 1 cut(s) 424
TseI GCWGC 3 cut(s) 309, 521, 1001
Tsp45I GTSAC 1 cut(s) 424
TspDTI ATGAA 3 cut(s) 684, 907, 985
TspGWI ACGGA 1 cut(s) 208
TspRI CASTG 4 cut(s) 277, 301, 433, 540
Van91I CCANNNNNTGG 2 cut(s) 681, 710
VneI GTGCAC 1 cut(s) 510
VspI ATTAAT 1 cut(s) 1149
XapI RAATTY 1 cut(s) 932
XcmI CCANNNNNNNNNTGG 1 cut(s) 682
XmnI GAANNNNTTC 1 cut(s) 404
XspI CTAG 2 cut(s) 84, 621
ZraI GACGTC 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.