pycom07g04710
NAC Family

inactive poly ADP-ribose polymerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0018534
Physical Location & Seq
Reverse (-)
4029627 .. 4031088
1462 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g04710.3

Sequence Viewer

Length: 330 bp
ATGATTTCAAAGCCTGGAAGATTTCAGGGGGAAACCACTACCACTGGTTCTGCTCCTCAAAGAACCCCTAAATCACCCTGGATGCCTTTCCCCATGTTGTTTTCTGCTATTGAAAATAAAGTTCCTCCTGAAGATATGAAACAAGTTAATGTTCATTATGACTTGTTCAGGGAAAGAAAGATAACTCGTGATGAATTTGTGAAAAAGTTGAGGTTGGTTGTTGGAGATACTTTGTTGAGGTCTACGATAACAGAACTTCAGTGTAAGATACCTCATAAAGCAATGAGTAAATTGGAAGTTCCAAAGACGGGTTTACGCTGCCTCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000160 GO:0000302 GO:0000303 GO:0000305 GO:0001101 GO:0001505 GO:0002376 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006807 GO:0006809 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009648 GO:0009651 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009753 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009814 GO:0009816 GO:0009867 GO:0009873 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010101 GO:0010102 GO:0010154 GO:0010193 GO:0010228 GO:0012501 GO:0017144 GO:0019222 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0032501 GO:0032502 GO:0032870 GO:0034641 GO:0035556 GO:0042133 GO:0042136 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044464 GO:0045087 GO:0046209 GO:0046677 GO:0048316 GO:0048364 GO:0048527 GO:0048528 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071369 GO:0071395 GO:0071495 GO:0072593 GO:0090696 GO:0090697 GO:0090698 GO:0098542 GO:0099402 GO:1901700 GO:1901701 GO:1903409 GO:1905392 GO:2000377 GO:2001057
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PARP RST

Protein Analysis

110

Amino Acids

12.53

Weight (kDa)

9.95

Isoelectric Point (pI)

59.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018534)

Species Orthologous Gene IDs
pyrus_communis pycom07g04710
rosa_chinensis RchiOBHm_Chr2g0176171
rosa_laevigata RLG00000011568 RLG00000013827 RLG00000018612 RLG00000026517 RLG00000032416 RLG00000033785
rosa_multiflora Rmu_sc0006800.1_g000008
rosa_roxburghii Rroxscaffold_7G00196410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 242
AcsI RAATTY 1 cut(s) 194
AcuI CTGAAG 2 cut(s) 150, 242
AfiI CCNNNNNNNGG 1 cut(s) 308
AgsI TTSAA 2 cut(s) 9, 113
AjnI CCWGG 2 cut(s) 13, 77
ApeKI GCWGC 1 cut(s) 318
ApoI RAATTY 1 cut(s) 194
AsuHPI GGTGA 1 cut(s) 66
BauI CACGAG 1 cut(s) 186
BbvI GCAGC 1 cut(s) 305
BciT130I CCWGG 2 cut(s) 15, 79
BisI GCNGC 1 cut(s) 319
BlsI GCNGC 1 cut(s) 320
Bme1390I CCNGG 2 cut(s) 15, 79
BmrFI CCNGG 2 cut(s) 15, 79
BmsI GCATC 1 cut(s) 72
BpuEI CTTGAG 1 cut(s) 308
BsaJI CCNNGG 1 cut(s) 77
Bsc4I CCNNNNNNNGG 1 cut(s) 308
Bse1I ACTGG 1 cut(s) 49
Bse3DI GCAATG 1 cut(s) 288
BseBI CCWGG 2 cut(s) 15, 79
BseDI CCNNGG 1 cut(s) 77
BseGI GGATG 1 cut(s) 87
BseLI CCNNNNNNNGG 1 cut(s) 308
BseMI GCAATG 1 cut(s) 288
BseNI ACTGG 1 cut(s) 49
BseRI GAGGAG 1 cut(s) 45
BseXI GCAGC 1 cut(s) 305
BslI CCNNNNNNNGG 1 cut(s) 308
BsrDI GCAATG 1 cut(s) 288
BsrI ACTGG 1 cut(s) 49
BssECI CCNNGG 1 cut(s) 77
BssSI CACGAG 1 cut(s) 186
Bst2BI CACGAG 1 cut(s) 186
Bst2UI CCWGG 2 cut(s) 15, 79
BstF5I GGATG 1 cut(s) 87
BstNI CCWGG 2 cut(s) 15, 79
BstSCI CCNGG 2 cut(s) 13, 77
BstV1I GCAGC 1 cut(s) 305
BtsCI GGATG 1 cut(s) 87
BtsIMutI CAGTG 2 cut(s) 42, 266
CviAII CATG 1 cut(s) 94
CviJI RGCY 1 cut(s) 13
CviKI_1 RGCY 1 cut(s) 13
Eco57I CTGAAG 2 cut(s) 150, 242
EcoRII CCWGG 2 cut(s) 13, 77
FaeI CATG 1 cut(s) 97
FaiI YATR 4 cut(s) 95, 137, 159, 276
FatI CATG 1 cut(s) 93
FblI GTMKAC 1 cut(s) 242
Fnu4HI GCNGC 1 cut(s) 319
FokI GGATG 1 cut(s) 94
Fsp4HI GCNGC 1 cut(s) 319
GluI GCNGC 1 cut(s) 319
Hin1II CATG 1 cut(s) 97
HphI GGTGA 1 cut(s) 66
Hpy166II GTNNAC 2 cut(s) 243, 314
Hpy188III TCNNGA 2 cut(s) 128, 188
Hpy8I GTNNAC 2 cut(s) 243, 314
Hsp92II CATG 1 cut(s) 97
LmnI GCTCC 1 cut(s) 58
LpnPI CCDG 7 cut(s) 11, 27, 30, 64, 91, 141, 154
Lsp1109I GCAGC 1 cut(s) 305
LweI GCATC 1 cut(s) 72
MboII GAAGA 2 cut(s) 30, 143
MluCI AATT 2 cut(s) 194, 290
MmeI TCCRAC 1 cut(s) 202
MnlI CCTC 5 cut(s) 66, 135, 204, 231, 282
MseI TTAA 1 cut(s) 147
MspR9I CCNGG 2 cut(s) 15, 79
MvaI CCWGG 2 cut(s) 15, 79
NlaIII CATG 1 cut(s) 97
PkrI GCNGC 1 cut(s) 320
Psp6I CCWGG 2 cut(s) 13, 77
PspGI CCWGG 2 cut(s) 13, 77
SaqAI TTAA 1 cut(s) 147
SatI GCNGC 1 cut(s) 319
ScrFI CCNGG 2 cut(s) 15, 79
SetI ASST 3 cut(s) 215, 242, 274
SfaNI GCATC 1 cut(s) 72
SmlI CTYRAG 1 cut(s) 323
SmoI CTYRAG 1 cut(s) 323
Sse9I AATT 2 cut(s) 194, 290
StyD4I CCNGG 2 cut(s) 13, 77
TasI AATT 2 cut(s) 194, 290
Tru1I TTAA 1 cut(s) 147
Tru9I TTAA 1 cut(s) 147
TscAI CASTG 2 cut(s) 49, 266
TseI GCWGC 1 cut(s) 318
TspDTI ATGAA 3 cut(s) 143, 152, 207
TspRI CASTG 2 cut(s) 49, 266
XapI RAATTY 1 cut(s) 194
XmiI GTMKAC 1 cut(s) 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.