ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1035700.v1.1 |
| pyrus_communis | pycom07g05700 pycom09g02060 pycom16g09840 pycom16g09900 |
| rosa_chinensis | RchiOBHm_Chr2g0111811 RchiOBHm_Chr7g0222401 |
| rosa_samantha | Rh1AG036700 Rh7BG340800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 334 |
| AclWI | GGATC | 1 cut(s) | 148 |
| AcuI | CTGAAG | 1 cut(s) | 119 |
| AfaI | GTAC | 1 cut(s) | 194 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 19, 244 |
| AgsI | TTSAA | 2 cut(s) | 83, 99 |
| AluBI | AGCT | 5 cut(s) | 33, 165, 190, 284, 333 |
| AluI | AGCT | 5 cut(s) | 33, 165, 190, 284, 333 |
| AlwI | GGATC | 1 cut(s) | 148 |
| BccI | CCATC | 1 cut(s) | 66 |
| BciVI | GTATCC | 2 cut(s) | 241, 287 |
| BfuAI | ACCTGC | 1 cut(s) | 334 |
| BfuI | GTATCC | 2 cut(s) | 241, 287 |
| BmiI | GGNNCC | 1 cut(s) | 28 |
| BmrI | ACTGGG | 1 cut(s) | 270 |
| BmuI | ACTGGG | 1 cut(s) | 270 |
| BsaJI | CCNNGG | 2 cut(s) | 13, 45 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 19, 244 |
| Bse1I | ACTGG | 1 cut(s) | 265 |
| BseDI | CCNNGG | 2 cut(s) | 13, 45 |
| BseGI | GGATG | 1 cut(s) | 77 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 19, 244 |
| BseNI | ACTGG | 1 cut(s) | 265 |
| BslFI | GGGAC | 1 cut(s) | 124 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 19, 244 |
| BsmFI | GGGAC | 1 cut(s) | 124 |
| BsmI | GAATGC | 2 cut(s) | 78, 328 |
| Bsp1407I | TGTACA | 1 cut(s) | 192 |
| Bsp143I | GATC | 1 cut(s) | 153 |
| Bsp19I | CCATGG | 1 cut(s) | 13 |
| BspLI | GGNNCC | 1 cut(s) | 28 |
| BspMI | ACCTGC | 1 cut(s) | 334 |
| BspPI | GGATC | 1 cut(s) | 148 |
| BsrGI | TGTACA | 1 cut(s) | 192 |
| BsrI | ACTGG | 1 cut(s) | 265 |
| BssECI | CCNNGG | 2 cut(s) | 13, 45 |
| BssMI | GATC | 1 cut(s) | 153 |
| BssT1I | CCWWGG | 2 cut(s) | 13, 45 |
| Bst6I | CTCTTC | 1 cut(s) | 178 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 206 |
| BstAUI | TGTACA | 1 cut(s) | 192 |
| BstDEI | CTNAG | 1 cut(s) | 318 |
| BstDSI | CCRYGG | 1 cut(s) | 13 |
| BstF5I | GGATG | 1 cut(s) | 77 |
| BstKTI | GATC | 1 cut(s) | 156 |
| BstMBI | GATC | 1 cut(s) | 153 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 187, 206 |
| BstNSI | RCATGY | 1 cut(s) | 302 |
| BsuI | GTATCC | 2 cut(s) | 241, 287 |
| BtgI | CCRYGG | 1 cut(s) | 13 |
| BtsCI | GGATG | 1 cut(s) | 77 |
| BveI | ACCTGC | 1 cut(s) | 334 |
| Csp6I | GTAC | 1 cut(s) | 193 |
| CviAII | CATG | 4 cut(s) | 14, 182, 299, 308 |
| CviJI | RGCY | 5 cut(s) | 33, 165, 190, 284, 333 |
| CviKI_1 | RGCY | 5 cut(s) | 33, 165, 190, 284, 333 |
| CviQI | GTAC | 1 cut(s) | 193 |
| DdeI | CTNAG | 1 cut(s) | 318 |
| DpnI | GATC | 1 cut(s) | 155 |
| DpnII | GATC | 1 cut(s) | 153 |
| Eam1104I | CTCTTC | 1 cut(s) | 178 |
| EarI | CTCTTC | 1 cut(s) | 178 |
| Eco130I | CCWWGG | 2 cut(s) | 13, 45 |
| Eco57I | CTGAAG | 1 cut(s) | 119 |
| EcoT14I | CCWWGG | 2 cut(s) | 13, 45 |
| ErhI | CCWWGG | 2 cut(s) | 13, 45 |
| FaeI | CATG | 4 cut(s) | 17, 185, 302, 311 |
| FaiI | YATR | 7 cut(s) | 8, 10, 15, 59, 183, 300, 309 |
| FaqI | GGGAC | 1 cut(s) | 124 |
| FatI | CATG | 4 cut(s) | 13, 181, 298, 307 |
| FokI | GGATG | 1 cut(s) | 84 |
| Hin1II | CATG | 4 cut(s) | 17, 185, 302, 311 |
| HindIII | AAGCTT | 2 cut(s) | 282, 331 |
| Hpy188III | TCNNGA | 2 cut(s) | 99, 151 |
| HpyAV | CCTTC | 1 cut(s) | 249 |
| HpyCH4IV | ACGT | 1 cut(s) | 289 |
| HpyCH4V | TGCA | 7 cut(s) | 78, 181, 209, 219, 298, 326, 363 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 187, 206 |
| HpyF3I | CTNAG | 1 cut(s) | 318 |
| HpySE526I | ACGT | 1 cut(s) | 289 |
| Hsp92II | CATG | 4 cut(s) | 17, 185, 302, 311 |
| Kzo9I | GATC | 1 cut(s) | 153 |
| LmnI | GCTCC | 1 cut(s) | 264 |
| LpnPI | CCDG | 7 cut(s) | 4, 43, 132, 175, 246, 258, 329 |
| MaeII | ACGT | 1 cut(s) | 289 |
| MalI | GATC | 1 cut(s) | 155 |
| MboI | GATC | 1 cut(s) | 153 |
| MboII | GAAGA | 1 cut(s) | 165 |
| MluCI | AATT | 5 cut(s) | 51, 84, 127, 210, 370 |
| MnlI | CCTC | 1 cut(s) | 363 |
| Mva1269I | GAATGC | 2 cut(s) | 78, 328 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 187, 206 |
| NcoI | CCATGG | 1 cut(s) | 13 |
| NdeII | GATC | 1 cut(s) | 153 |
| NlaIII | CATG | 4 cut(s) | 17, 185, 302, 311 |
| NlaIV | GGNNCC | 1 cut(s) | 28 |
| NspI | RCATGY | 1 cut(s) | 302 |
| PctI | GAATGC | 2 cut(s) | 78, 328 |
| PspN4I | GGNNCC | 1 cut(s) | 28 |
| RsaI | GTAC | 1 cut(s) | 194 |
| RsaNI | GTAC | 1 cut(s) | 193 |
| Sau3AI | GATC | 1 cut(s) | 153 |
| SetI | ASST | 7 cut(s) | 35, 167, 192, 286, 292, 335, 348 |
| Sse9I | AATT | 5 cut(s) | 51, 84, 127, 210, 370 |
| SspI | AATATT | 1 cut(s) | 359 |
| StyI | CCWWGG | 2 cut(s) | 13, 45 |
| TaiI | ACGT | 1 cut(s) | 292 |
| TaqI | TCGA | 1 cut(s) | 152 |
| TasI | AATT | 5 cut(s) | 51, 84, 127, 210, 370 |
| TatI | WGTACW | 1 cut(s) | 192 |
| TspDTI | ATGAA | 1 cut(s) | 324 |
| XceI | RCATGY | 1 cut(s) | 302 |