RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1035700.v1.1 |
| pyrus_communis | pycom07g05700 pycom09g02060 pycom16g09840 pycom16g09900 |
| rosa_chinensis | RchiOBHm_Chr2g0111811 RchiOBHm_Chr7g0222401 |
| rosa_samantha | Rh1AG036700 Rh7BG340800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 100 |
| AfaI | GTAC | 2 cut(s) | 85, 90 |
| AgsI | TTSAA | 1 cut(s) | 59 |
| Alw26I | GTCTC | 1 cut(s) | 14 |
| AlwI | GGATC | 1 cut(s) | 100 |
| BbsI | GAAGAC | 1 cut(s) | 87 |
| BcoDI | GTCTC | 1 cut(s) | 14 |
| BpiI | GAAGAC | 1 cut(s) | 87 |
| BpuEI | CTTGAG | 1 cut(s) | 98 |
| Bse1I | ACTGG | 1 cut(s) | 121 |
| BseMII | CTCAG | 2 cut(s) | 25, 125 |
| BseNI | ACTGG | 1 cut(s) | 121 |
| BsmAI | GTCTC | 1 cut(s) | 14 |
| Bsp143I | GATC | 1 cut(s) | 105 |
| BspCNI | CTCAG | 2 cut(s) | 24, 124 |
| BspPI | GGATC | 1 cut(s) | 100 |
| BsrI | ACTGG | 1 cut(s) | 121 |
| BssMI | GATC | 1 cut(s) | 105 |
| Bst4CI | ACNGT | 2 cut(s) | 88, 93 |
| BstDEI | CTNAG | 3 cut(s) | 11, 68, 111 |
| BstKTI | GATC | 1 cut(s) | 108 |
| BstMAI | GTCTC | 1 cut(s) | 14 |
| BstMBI | GATC | 1 cut(s) | 105 |
| BstV2I | GAAGAC | 1 cut(s) | 87 |
| Csp6I | GTAC | 2 cut(s) | 84, 89 |
| CviJI | RGCY | 1 cut(s) | 120 |
| CviKI_1 | RGCY | 1 cut(s) | 120 |
| CviQI | GTAC | 2 cut(s) | 84, 89 |
| DdeI | CTNAG | 3 cut(s) | 11, 68, 111 |
| DpnI | GATC | 1 cut(s) | 107 |
| DpnII | GATC | 1 cut(s) | 105 |
| FaiI | YATR | 1 cut(s) | 136 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 51, 83 |
| FspEI | CC | 6 cut(s) | 30, 47, 110, 122, 123, 134 |
| HinfI | GANTC | 1 cut(s) | 55 |
| Hpy166II | GTNNAC | 2 cut(s) | 74, 84 |
| Hpy188I | TCNGA | 2 cut(s) | 54, 114 |
| Hpy188III | TCNNGA | 1 cut(s) | 59 |
| Hpy8I | GTNNAC | 2 cut(s) | 74, 84 |
| HpyCH4III | ACNGT | 2 cut(s) | 88, 93 |
| HpyF3I | CTNAG | 3 cut(s) | 11, 68, 111 |
| Kzo9I | GATC | 1 cut(s) | 105 |
| LpnPI | CCDG | 1 cut(s) | 134 |
| MalI | GATC | 1 cut(s) | 107 |
| MboI | GATC | 1 cut(s) | 105 |
| MboII | GAAGA | 2 cut(s) | 35, 87 |
| MnlI | CCTC | 2 cut(s) | 55, 120 |
| NdeII | GATC | 1 cut(s) | 105 |
| PfeI | GAWTC | 1 cut(s) | 55 |
| RsaI | GTAC | 2 cut(s) | 85, 90 |
| RsaNI | GTAC | 2 cut(s) | 84, 89 |
| Sau3AI | GATC | 1 cut(s) | 105 |
| SetI | ASST | 1 cut(s) | 66 |
| SgeI | CNNG | 6 cut(s) | 25, 29, 71, 89, 115, 133 |
| SmlI | CTYRAG | 1 cut(s) | 77 |
| SmoI | CTYRAG | 1 cut(s) | 77 |
| TaaI | ACNGT | 2 cut(s) | 88, 93 |
| TatI | WGTACW | 2 cut(s) | 83, 88 |
| TfiI | GAWTC | 1 cut(s) | 55 |
| TspDTI | ATGAA | 1 cut(s) | 36 |