ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1035700.v1.1 |
| pyrus_communis | pycom07g05700 pycom09g02060 pycom16g09840 pycom16g09900 |
| rosa_chinensis | RchiOBHm_Chr2g0111811 RchiOBHm_Chr7g0222401 |
| rosa_samantha | Rh1AG036700 Rh7BG340800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 243 |
| Acc36I | ACCTGC | 1 cut(s) | 208 |
| AcsI | RAATTY | 2 cut(s) | 52, 90 |
| AcuI | CTGAAG | 1 cut(s) | 50 |
| AgsI | TTSAA | 3 cut(s) | 48, 57, 122 |
| AjnI | CCWGG | 1 cut(s) | 134 |
| AluBI | AGCT | 2 cut(s) | 158, 207 |
| AluI | AGCT | 2 cut(s) | 158, 207 |
| Alw26I | GTCTC | 1 cut(s) | 103 |
| ApoI | RAATTY | 2 cut(s) | 52, 90 |
| BceAI | ACGGC | 1 cut(s) | 77 |
| BciT130I | CCWGG | 1 cut(s) | 136 |
| BciVI | GTATCC | 1 cut(s) | 161 |
| BcoDI | GTCTC | 1 cut(s) | 103 |
| BfaI | CTAG | 1 cut(s) | 147 |
| BfuAI | ACCTGC | 1 cut(s) | 208 |
| BfuI | GTATCC | 1 cut(s) | 161 |
| Bme1390I | CCNGG | 1 cut(s) | 136 |
| BmrFI | CCNGG | 1 cut(s) | 136 |
| BsaI | GGTCTC | 1 cut(s) | 103 |
| BseBI | CCWGG | 1 cut(s) | 136 |
| BsmAI | GTCTC | 1 cut(s) | 103 |
| BsmI | GAATGC | 1 cut(s) | 163 |
| Bso31I | GGTCTC | 1 cut(s) | 103 |
| BspMI | ACCTGC | 1 cut(s) | 208 |
| BspTNI | GGTCTC | 1 cut(s) | 103 |
| Bst2UI | CCWGG | 1 cut(s) | 136 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 169 |
| BstC8I | GCNNGC | 1 cut(s) | 25 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstMAI | GTCTC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 169 |
| BstNI | CCWGG | 1 cut(s) | 136 |
| BstNSI | RCATGY | 1 cut(s) | 176 |
| BstSCI | CCNGG | 1 cut(s) | 134 |
| BsuI | GTATCC | 1 cut(s) | 161 |
| BveI | ACCTGC | 1 cut(s) | 208 |
| Cac8I | GCNNGC | 1 cut(s) | 25 |
| CviAII | CATG | 2 cut(s) | 173, 182 |
| CviJI | RGCY | 5 cut(s) | 64, 117, 128, 158, 207 |
| CviKI_1 | RGCY | 5 cut(s) | 64, 117, 128, 158, 207 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| Eco31I | GGTCTC | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 1 cut(s) | 50 |
| EcoRI | GAATTC | 1 cut(s) | 52 |
| EcoRII | CCWGG | 1 cut(s) | 134 |
| FaeI | CATG | 2 cut(s) | 176, 185 |
| FaiI | YATR | 6 cut(s) | 19, 21, 174, 183, 198, 243 |
| FatI | CATG | 2 cut(s) | 172, 181 |
| FauNDI | CATATG | 1 cut(s) | 19 |
| FspBI | CTAG | 1 cut(s) | 147 |
| Hin1II | CATG | 2 cut(s) | 176, 185 |
| HindIII | AAGCTT | 1 cut(s) | 205 |
| HinfI | GANTC | 2 cut(s) | 8, 73 |
| Hpy188III | TCNNGA | 2 cut(s) | 12, 68 |
| HpyCH4IV | ACGT | 1 cut(s) | 42 |
| HpyCH4V | TGCA | 3 cut(s) | 104, 163, 172 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 169 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| HpySE526I | ACGT | 1 cut(s) | 42 |
| Hsp92II | CATG | 2 cut(s) | 176, 185 |
| LmnI | GCTCC | 1 cut(s) | 138 |
| LpnPI | CCDG | 7 cut(s) | 13, 25, 53, 66, 121, 148, 203 |
| MaeI | CTAG | 1 cut(s) | 147 |
| MaeII | ACGT | 1 cut(s) | 42 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MluCI | AATT | 3 cut(s) | 52, 90, 244 |
| MlyI | GAGTC | 1 cut(s) | 17 |
| MnlI | CCTC | 1 cut(s) | 237 |
| MspR9I | CCNGG | 1 cut(s) | 136 |
| Mva1269I | GAATGC | 1 cut(s) | 163 |
| MvaI | CCWGG | 1 cut(s) | 136 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 169 |
| NdeI | CATATG | 1 cut(s) | 19 |
| NlaIII | CATG | 2 cut(s) | 176, 185 |
| NmuCI | GTSAC | 1 cut(s) | 38 |
| NspI | RCATGY | 1 cut(s) | 176 |
| PctI | GAATGC | 1 cut(s) | 163 |
| PfeI | GAWTC | 1 cut(s) | 73 |
| PleI | GAGTC | 1 cut(s) | 16 |
| PpsI | GAGTC | 1 cut(s) | 16 |
| PsiI | TTATAA | 1 cut(s) | 243 |
| Psp6I | CCWGG | 1 cut(s) | 134 |
| PspGI | CCWGG | 1 cut(s) | 134 |
| SchI | GAGTC | 1 cut(s) | 17 |
| ScrFI | CCNGG | 1 cut(s) | 136 |
| SetI | ASST | 4 cut(s) | 45, 160, 209, 222 |
| Sse9I | AATT | 3 cut(s) | 52, 90, 244 |
| SspI | AATATT | 1 cut(s) | 233 |
| SspMI | CTAG | 1 cut(s) | 147 |
| StyD4I | CCNGG | 1 cut(s) | 134 |
| TaiI | ACGT | 1 cut(s) | 45 |
| TasI | AATT | 3 cut(s) | 52, 90, 244 |
| TfiI | GAWTC | 1 cut(s) | 73 |
| TseFI | GTSAC | 1 cut(s) | 38 |
| Tsp45I | GTSAC | 1 cut(s) | 38 |
| TspDTI | ATGAA | 1 cut(s) | 198 |
| XapI | RAATTY | 2 cut(s) | 52, 90 |
| XceI | RCATGY | 1 cut(s) | 176 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 24 |
| XspI | CTAG | 1 cut(s) | 147 |