RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1035700.v1.1 |
| pyrus_communis | pycom07g05700 pycom09g02060 pycom16g09840 pycom16g09900 |
| rosa_chinensis | RchiOBHm_Chr2g0111811 RchiOBHm_Chr7g0222401 |
| rosa_samantha | Rh1AG036700 Rh7BG340800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 130 |
| AcuI | CTGAAG | 1 cut(s) | 188 |
| AflIII | ACRYGT | 1 cut(s) | 172 |
| AluBI | AGCT | 1 cut(s) | 158 |
| AluI | AGCT | 1 cut(s) | 158 |
| ApeKI | GCWGC | 1 cut(s) | 125 |
| AspA2I | CCTAGG | 1 cut(s) | 134 |
| AspLEI | GCGC | 1 cut(s) | 130 |
| AvrII | CCTAGG | 1 cut(s) | 134 |
| BbvI | GCAGC | 1 cut(s) | 137 |
| BciVI | GTATCC | 1 cut(s) | 161 |
| BfaI | CTAG | 1 cut(s) | 135 |
| BfmI | CTRYAG | 1 cut(s) | 47 |
| BfuI | GTATCC | 1 cut(s) | 161 |
| BisI | GCNGC | 1 cut(s) | 126 |
| BlnI | CCTAGG | 1 cut(s) | 134 |
| BlsI | GCNGC | 1 cut(s) | 127 |
| BsaJI | CCNNGG | 1 cut(s) | 134 |
| Bse3DI | GCAATG | 1 cut(s) | 208 |
| BseDI | CCNNGG | 1 cut(s) | 134 |
| BseMI | GCAATG | 1 cut(s) | 208 |
| BseXI | GCAGC | 1 cut(s) | 137 |
| Bsh1236I | CGCG | 1 cut(s) | 130 |
| BspFNI | CGCG | 1 cut(s) | 130 |
| BspMAI | CTGCAG | 1 cut(s) | 51 |
| BsrDI | GCAATG | 1 cut(s) | 208 |
| BssECI | CCNNGG | 1 cut(s) | 134 |
| BssT1I | CCWWGG | 1 cut(s) | 134 |
| Bst4CI | ACNGT | 1 cut(s) | 32 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 80 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstFNI | CGCG | 1 cut(s) | 130 |
| BstHHI | GCGC | 1 cut(s) | 130 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 80 |
| BstNSI | RCATGY | 1 cut(s) | 176 |
| BstSFI | CTRYAG | 1 cut(s) | 47 |
| BstUI | CGCG | 1 cut(s) | 130 |
| BstV1I | GCAGC | 1 cut(s) | 137 |
| BsuI | GTATCC | 1 cut(s) | 161 |
| CfoI | GCGC | 1 cut(s) | 130 |
| CviAII | CATG | 1 cut(s) | 173 |
| CviJI | RGCY | 1 cut(s) | 158 |
| CviKI_1 | RGCY | 1 cut(s) | 158 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| Eco130I | CCWWGG | 1 cut(s) | 134 |
| Eco57I | CTGAAG | 1 cut(s) | 188 |
| EcoT14I | CCWWGG | 1 cut(s) | 134 |
| ErhI | CCWWGG | 1 cut(s) | 134 |
| FaeI | CATG | 1 cut(s) | 176 |
| FaiI | YATR | 2 cut(s) | 163, 174 |
| FatI | CATG | 1 cut(s) | 172 |
| Fnu4HI | GCNGC | 1 cut(s) | 126 |
| Fsp4HI | GCNGC | 1 cut(s) | 126 |
| FspBI | CTAG | 1 cut(s) | 135 |
| GlaI | GCGC | 1 cut(s) | 129 |
| GluI | GCNGC | 1 cut(s) | 126 |
| HhaI | GCGC | 1 cut(s) | 130 |
| Hin1II | CATG | 1 cut(s) | 176 |
| Hin6I | GCGC | 1 cut(s) | 128 |
| HinP1I | GCGC | 1 cut(s) | 128 |
| HincII | GTYRAC | 1 cut(s) | 28 |
| HindII | GTYRAC | 1 cut(s) | 28 |
| HindIII | AAGCTT | 1 cut(s) | 156 |
| Hpy166II | GTNNAC | 2 cut(s) | 28, 227 |
| Hpy8I | GTNNAC | 2 cut(s) | 28, 227 |
| HpyAV | CCTTC | 1 cut(s) | 123 |
| HpyCH4III | ACNGT | 1 cut(s) | 32 |
| HpyCH4V | TGCA | 6 cut(s) | 49, 55, 69, 83, 93, 259 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 80 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| Hsp92II | CATG | 1 cut(s) | 176 |
| HspAI | GCGC | 1 cut(s) | 128 |
| LmnI | GCTCC | 1 cut(s) | 138 |
| LpnPI | CCDG | 2 cut(s) | 132, 195 |
| Lsp1109I | GCAGC | 1 cut(s) | 137 |
| MaeI | CTAG | 1 cut(s) | 135 |
| MboII | GAAGA | 2 cut(s) | 35, 194 |
| MfeI | CAATTG | 1 cut(s) | 260 |
| MluCI | AATT | 2 cut(s) | 84, 260 |
| MnlI | CCTC | 1 cut(s) | 259 |
| MunI | CAATTG | 1 cut(s) | 260 |
| MvnI | CGCG | 1 cut(s) | 130 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 80 |
| NlaIII | CATG | 1 cut(s) | 176 |
| NspI | RCATGY | 1 cut(s) | 176 |
| PciI | ACATGT | 1 cut(s) | 172 |
| PkrI | GCNGC | 1 cut(s) | 127 |
| PscI | ACATGT | 1 cut(s) | 172 |
| PstI | CTGCAG | 1 cut(s) | 51 |
| SatI | GCNGC | 1 cut(s) | 126 |
| SetI | ASST | 4 cut(s) | 136, 160, 184, 244 |
| SfcI | CTRYAG | 1 cut(s) | 47 |
| SgeI | CNNG | 9 cut(s) | 82, 141, 147, 154, 159, 167, 185, 194, 247 |
| Sse9I | AATT | 2 cut(s) | 84, 260 |
| SspI | AATATT | 2 cut(s) | 108, 255 |
| SspMI | CTAG | 1 cut(s) | 135 |
| StyI | CCWWGG | 1 cut(s) | 134 |
| TaaI | ACNGT | 1 cut(s) | 32 |
| TasI | AATT | 2 cut(s) | 84, 260 |
| TseI | GCWGC | 1 cut(s) | 125 |
| TspDTI | ATGAA | 1 cut(s) | 156 |
| XceI | RCATGY | 1 cut(s) | 176 |
| XmaJI | CCTAGG | 1 cut(s) | 134 |
| XspI | CTAG | 1 cut(s) | 135 |