Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0018885

Physical Location & Seq

Genomic Coordinates Reverse (-)

15576107 .. 15577810

Gene Structure 1704 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g13700.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 651 bp

ATGAGGAGCAGCAAGGTTGATAGCTTGTCTGCATTTCCTGAATTCACGTTTGAGCAACTTAAAAATGCGACATCTGGTTTTTGTGTGGAGTACATTGTGTCTGAGCAAGGAGAGAAGGCTCCAAATGTCGTTTATAAAGGAAAACCTGAAAATCAGAAGAGAACTGCTGTTAAGCACTTGAATAGGATGGCCCGGCCCGATGATCGCAATTTTTGGTATTCACTGAAATTATTTTTCTATACTAAAACCCAAACGCCAGTGTACTGTTCACAGACAGTGGAGTGGCGAAAGTGCCCTCCGTTTGGTTTTCCATGCCCACGTGTTGATCATCGTAGGCTGTTGCGTTTCCCCTATATTCTTCCCACTTTTACTTTTGCTTCCCATATTAGTCTCTGCTTTTCTATCACTTTTAGACCTCACTTTCTTTCCCTTTCAAACCCTTGCTTCCGTTGGTCGCGAACTTGTCGCTCTCAAATCCCGCTTTTTGTCGTTCTCGGCTCTTGGTTTGCTCAGAAAGCACCGAATCAGTTTAAGGTTTCGTTTATACAGAGACAAGGACAACTTGGCCACTGCACCATTTGTCGGCACTTGAGGGTACACTTCTGGGCATCATTACGGGTGTCAATTTCTTTACAACTCATGGATAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

217

Amino Acids

25.37

Weight (kDa)

10.01

Isoelectric Point (pI)

41.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018885)

Species	Orthologous Gene IDs
malus_domestica	MD14G1241500.v1.1
pyrus_communis	pycom01g00400 pycom01g08500 pycom05g14550 pycom07g13640 pycom07g13700 pycom12659g00060 pycom12659g00150 pycom13g00430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	135
AccII	CGCG	1 cut(s)	457
AciI	CCGC	1 cut(s)	479
AcoI	YGGCCR	1 cut(s)	565
AcsI	RAATTY	1 cut(s)	41
AcvI	CACGTG	1 cut(s)	320
AfaI	GTAC	3 cut(s)	92, 263, 597
AfiI	CCNNNNNNNGG	2 cut(s)	302, 582
AflIII	ACRYGT	1 cut(s)	319
AgsI	TTSAA	2 cut(s)	181, 435
AluBI	AGCT	1 cut(s)	24
AluI	AGCT	1 cut(s)	24
Alw26I	GTCTC	2 cut(s)	395, 544
AoxI	GGCC	3 cut(s)	189, 194, 565
ApeKI	GCWGC	1 cut(s)	9
ApoI	RAATTY	1 cut(s)	41
AspS9I	GGNCC	2 cut(s)	190, 195
AsuC2I	CCSGG	1 cut(s)	193
BaeGI	GKGCMC	1 cut(s)	296
BalI	TGGCCA	1 cut(s)	567
BbrPI	CACGTG	1 cut(s)	320
BbvI	GCAGC	1 cut(s)	21
BccI	CCATC	1 cut(s)	181
BclI	TGATCA	1 cut(s)	325
BcnI	CCSGG	1 cut(s)	193
BcoDI	GTCTC	2 cut(s)	395, 544
BisI	GCNGC	1 cut(s)	10
BlsI	GCNGC	1 cut(s)	11
Bme1390I	CCNGG	1 cut(s)	193
BmgT120I	GGNCC	2 cut(s)	190, 195
BmiI	GGNNCC	1 cut(s)	120
BmrFI	CCNGG	1 cut(s)	193
BmsI	GCATC	1 cut(s)	617
BpuEI	CTTGAG	1 cut(s)	610
BpuMI	CCSGG	1 cut(s)	193
BsaAI	YACGTR	1 cut(s)	320
Bsc4I	CCNNNNNNNGG	2 cut(s)	302, 582
Bse1I	ACTGG	1 cut(s)	257
BseGI	GGATG	1 cut(s)	192
BseLI	CCNNNNNNNGG	2 cut(s)	302, 582
BseMII	CTCAG	2 cut(s)	93, 524
BseNI	ACTGG	1 cut(s)	257
BseRI	GAGGAG	1 cut(s)	19
BseSI	GKGCMC	1 cut(s)	296
BseXI	GCAGC	1 cut(s)	21
BsgI	GTGCAG	1 cut(s)	556
Bsh1236I	CGCG	1 cut(s)	457
BshFI	GGCC	3 cut(s)	191, 196, 567
BsiSI	CCGG	1 cut(s)	193
BslI	CCNNNNNNNGG	2 cut(s)	302, 582
BsmAI	GTCTC	2 cut(s)	395, 544
BsnI	GGCC	3 cut(s)	191, 196, 567
Bsp1286I	GDGCHC	1 cut(s)	296
Bsp143I	GATC	2 cut(s)	202, 325
Bsp68I	TCGCGA	1 cut(s)	457
BspACI	CCGC	1 cut(s)	479
BspANI	GGCC	3 cut(s)	191, 196, 567
BspCNI	CTCAG	2 cut(s)	94, 523
BspFNI	CGCG	1 cut(s)	457
BspLI	GGNNCC	1 cut(s)	120
BsrI	ACTGG	1 cut(s)	257
BssMI	GATC	2 cut(s)	202, 325
Bst4CI	ACNGT	2 cut(s)	266, 277
Bst6I	CTCTTC	1 cut(s)	152
BstBAI	YACGTR	1 cut(s)	320
BstDEI	CTNAG	2 cut(s)	102, 510
BstF5I	GGATG	1 cut(s)	192
BstFNI	CGCG	1 cut(s)	457
BstKTI	GATC	2 cut(s)	205, 328
BstMAI	GTCTC	2 cut(s)	395, 544
BstMBI	GATC	2 cut(s)	202, 325
BstMWI	GCNNNNNNNGC	1 cut(s)	515
BstSCI	CCNGG	1 cut(s)	191
BstSLI	GKGCMC	1 cut(s)	296
BstUI	CGCG	1 cut(s)	457
BstV1I	GCAGC	1 cut(s)	21
BsuRI	GGCC	3 cut(s)	191, 196, 567
BtsCI	GGATG	1 cut(s)	192
BtsI	GCAGTG	1 cut(s)	568
BtsIMutI	CAGTG	4 cut(s)	221, 264, 282, 568
BtuMI	TCGCGA	1 cut(s)	457
Cfr13I	GGNCC	2 cut(s)	190, 195
Csp6I	GTAC	3 cut(s)	91, 262, 596
CviAII	CATG	2 cut(s)	312, 640
CviJI	RGCY	7 cut(s)	24, 119, 191, 196, 337, 498, 567
CviKI_1	RGCY	7 cut(s)	24, 119, 191, 196, 337, 498, 567
CviQI	GTAC	3 cut(s)	91, 262, 596
DdeI	CTNAG	2 cut(s)	102, 510
DpnI	GATC	2 cut(s)	204, 327
DpnII	GATC	2 cut(s)	202, 325
EaeI	YGGCCR	1 cut(s)	565
Eam1104I	CTCTTC	1 cut(s)	152
EarI	CTCTTC	1 cut(s)	152
Eco72I	CACGTG	1 cut(s)	320
EcoRI	GAATTC	1 cut(s)	41
FaeI	CATG	2 cut(s)	315, 643
FaiI	YATR	7 cut(s)	135, 240, 313, 354, 384, 545, 641
FalI	AAGNNNNNCTT	2 cut(s)	546, 578
FatI	CATG	2 cut(s)	311, 639
FauI	CCCGC	1 cut(s)	486
FbaI	TGATCA	1 cut(s)	325
Fnu4HI	GCNGC	1 cut(s)	10
FokI	GGATG	1 cut(s)	199
Fsp4HI	GCNGC	1 cut(s)	10
GluI	GCNGC	1 cut(s)	10
HaeIII	GGCC	3 cut(s)	191, 196, 567
HapII	CCGG	1 cut(s)	193
Hin1II	CATG	2 cut(s)	315, 643
HinfI	GANTC	1 cut(s)	523
HpaII	CCGG	1 cut(s)	193
Hpy166II	GTNNAC	3 cut(s)	262, 269, 598
Hpy188I	TCNGA	3 cut(s)	103, 156, 513
Hpy188III	TCNNGA	2 cut(s)	38, 456
Hpy8I	GTNNAC	3 cut(s)	262, 269, 598
HpyAV	CCTTC	1 cut(s)	109
HpyCH4III	ACNGT	2 cut(s)	266, 277
HpyCH4IV	ACGT	2 cut(s)	47, 319
HpyCH4V	TGCA	2 cut(s)	32, 573
HpyF10VI	GCNNNNNNNGC	1 cut(s)	515
HpyF3I	CTNAG	2 cut(s)	102, 510
HpySE526I	ACGT	2 cut(s)	47, 319
Hsp92II	CATG	2 cut(s)	315, 643
Ksp22I	TGATCA	1 cut(s)	325
Kzo9I	GATC	2 cut(s)	202, 325
LmnI	GCTCC	2 cut(s)	6, 124
LpnPI	CCDG	6 cut(s)	51, 60, 159, 206, 270, 589
Lsp1109I	GCAGC	1 cut(s)	21
LweI	GCATC	1 cut(s)	617
MaeII	ACGT	2 cut(s)	47, 319
MalI	GATC	2 cut(s)	204, 327
MboI	GATC	2 cut(s)	202, 325
MboII	GAAGA	2 cut(s)	169, 350
MhlI	GDGCHC	1 cut(s)	296
MlsI	TGGCCA	1 cut(s)	567
MluCI	AATT	4 cut(s)	41, 208, 227, 624
MluNI	TGGCCA	1 cut(s)	567
MnlI	CCTC	3 cut(s)	306, 426, 585
Mox20I	TGGCCA	1 cut(s)	567
MscI	TGGCCA	1 cut(s)	567
MseI	TTAA	3 cut(s)	60, 171, 531
Msp20I	TGGCCA	1 cut(s)	567
MspI	CCGG	1 cut(s)	193
MspR9I	CCNGG	1 cut(s)	193
MvnI	CGCG	1 cut(s)	457
MwoI	GCNNNNNNNGC	1 cut(s)	515
NciI	CCSGG	1 cut(s)	193
NdeII	GATC	2 cut(s)	202, 325
NlaIII	CATG	2 cut(s)	315, 643
NlaIV	GGNNCC	1 cut(s)	120
NmeAIII	GCCGAG	1 cut(s)	474
NruI	TCGCGA	1 cut(s)	457
PfeI	GAWTC	1 cut(s)	523
PkrI	GCNGC	1 cut(s)	11
PmaCI	CACGTG	1 cut(s)	320
PmlI	CACGTG	1 cut(s)	320
Ppu21I	YACGTR	1 cut(s)	320
PsiI	TTATAA	1 cut(s)	135
PspCI	CACGTG	1 cut(s)	320
PspN4I	GGNNCC	1 cut(s)	120
PspPI	GGNCC	2 cut(s)	190, 195
RruI	TCGCGA	1 cut(s)	457
RsaI	GTAC	3 cut(s)	92, 263, 597
RsaNI	GTAC	3 cut(s)	91, 262, 596
SaqAI	TTAA	3 cut(s)	60, 171, 531
SatI	GCNGC	1 cut(s)	10
Sau3AI	GATC	2 cut(s)	202, 325
Sau96I	GGNCC	2 cut(s)	190, 195
ScrFI	CCNGG	1 cut(s)	193
SduI	GDGCHC	1 cut(s)	296
SetI	ASST	7 cut(s)	18, 26, 50, 148, 322, 418, 537
SfaNI	GCATC	1 cut(s)	617
SmlI	CTYRAG	1 cut(s)	589
SmoI	CTYRAG	1 cut(s)	589
Sse9I	AATT	4 cut(s)	41, 208, 227, 624
SsiI	CCGC	1 cut(s)	479
StyD4I	CCNGG	1 cut(s)	191
TaaI	ACNGT	2 cut(s)	266, 277
TaiI	ACGT	2 cut(s)	50, 322
TasI	AATT	4 cut(s)	41, 208, 227, 624
TatI	WGTACW	2 cut(s)	90, 261
TfiI	GAWTC	1 cut(s)	523
Tru1I	TTAA	3 cut(s)	60, 171, 531
Tru9I	TTAA	3 cut(s)	60, 171, 531
TscAI	CASTG	4 cut(s)	228, 264, 282, 575
TseI	GCWGC	1 cut(s)	9
TspGWI	ACGGA	2 cut(s)	288, 437
TspRI	CASTG	4 cut(s)	228, 264, 282, 575
XapI	RAATTY	1 cut(s)	41

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.