pycom13g00430

Mitochondrial import receptor subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
271586 .. 272040
455 bp
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UTR
Exon/CDS
Intron
pycom13g00430.2

Sequence Viewer

Length: 315 bp
ATGTCTGTATTACGACAGGAAATGGAGAGCAATCTGTCTCAGTTTTGGAATGTACTGGAATCAAAGAAGCTAACCCAAGATGCTATTTCAAAGCTGGAGGAGGCATTGTTGATTAATCATAGGAAATATGATGCTCTGTGGTGCTGGGAAATGCTTAAATTGCTTGCGCATTATGCACTCCGGACCAGAATGAGGCAAAGATTCCAAAAGGTGTTATACTGCTTCCAGAAGACTTTCAACGAGGTACTTCCACTTACAAATTTGTTATTCTTGGAATTTGTAATCCCGCAGCAACGCGCGGGCATTACTAGCTAG

Protein Analysis

105

Amino Acids

12.49

Weight (kDa)

9.3

Isoelectric Point (pI)

45.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 168
AccII CGCG 2 cut(s) 297, 299
AccIII TCCGGA 1 cut(s) 180
AciI CCGC 2 cut(s) 287, 299
AcsI RAATTY 2 cut(s) 259, 275
AfaI GTAC 2 cut(s) 54, 246
AfiI CCNNNNNNNGG 1 cut(s) 192
AgsI TTSAA 2 cut(s) 90, 238
AluBI AGCT 3 cut(s) 70, 94, 312
AluI AGCT 3 cut(s) 70, 94, 312
Alw26I GTCTC 1 cut(s) 42
Aor13HI TCCGGA 1 cut(s) 180
ApeKI GCWGC 1 cut(s) 289
ApoI RAATTY 2 cut(s) 259, 275
AseI ATTAAT 1 cut(s) 114
Asp700I GAANNNNTTC 1 cut(s) 233
AspLEI GCGC 2 cut(s) 169, 299
AspS9I GGNCC 1 cut(s) 183
AvaII GGWCC 1 cut(s) 183
BbsI GAAGAC 1 cut(s) 236
BbvI GCAGC 1 cut(s) 301
BcoDI GTCTC 1 cut(s) 42
BfaI CTAG 2 cut(s) 309, 313
BisI GCNGC 1 cut(s) 290
BlsI GCNGC 1 cut(s) 291
Bme18I GGWCC 1 cut(s) 183
BmgT120I GGNCC 1 cut(s) 183
BmsI GCATC 2 cut(s) 70, 121
BpiI GAAGAC 1 cut(s) 236
BpmI CTGGAG 1 cut(s) 116
BsaWI WCCGGW 1 cut(s) 180
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bsc4I CCNNNNNNNGG 1 cut(s) 192
Bse1I ACTGG 1 cut(s) 60
BseAI TCCGGA 1 cut(s) 180
BseLI CCNNNNNNNGG 1 cut(s) 192
BseMII CTCAG 1 cut(s) 53
BseNI ACTGG 1 cut(s) 60
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 1 cut(s) 301
BseYI CCCAGC 1 cut(s) 144
Bsh1236I CGCG 2 cut(s) 297, 299
BsiSI CCGG 1 cut(s) 181
BslI CCNNNNNNNGG 1 cut(s) 192
BsmAI GTCTC 1 cut(s) 42
Bsp13I TCCGGA 1 cut(s) 180
BspACI CCGC 2 cut(s) 287, 299
BspCNI CTCAG 1 cut(s) 52
BspEI TCCGGA 1 cut(s) 180
BspFNI CGCG 2 cut(s) 297, 299
BsrI ACTGG 1 cut(s) 60
BstC8I GCNNGC 2 cut(s) 165, 301
BstDEI CTNAG 1 cut(s) 39
BstFNI CGCG 2 cut(s) 297, 299
BstHHI GCGC 2 cut(s) 169, 299
BstMAI GTCTC 1 cut(s) 42
BstMWI GCNNNNNNNGC 3 cut(s) 160, 173, 309
BstUI CGCG 2 cut(s) 297, 299
BstV1I GCAGC 1 cut(s) 301
BstV2I GAAGAC 1 cut(s) 236
Cac8I GCNNGC 2 cut(s) 165, 301
CfoI GCGC 2 cut(s) 169, 299
Cfr13I GGNCC 1 cut(s) 183
Csp6I GTAC 2 cut(s) 53, 245
CviJI RGCY 3 cut(s) 70, 94, 312
CviKI_1 RGCY 3 cut(s) 70, 94, 312
CviQI GTAC 2 cut(s) 53, 245
DdeI CTNAG 1 cut(s) 39
Eco47I GGWCC 1 cut(s) 183
FaiI YATR 4 cut(s) 120, 129, 174, 217
FauI CCCGC 2 cut(s) 292, 294
Fnu4HI GCNGC 1 cut(s) 290
Fsp4HI GCNGC 1 cut(s) 290
FspBI CTAG 2 cut(s) 309, 313
FspI TGCGCA 1 cut(s) 168
GlaI GCGC 2 cut(s) 168, 298
GluI GCNGC 1 cut(s) 290
GsaI CCCAGC 1 cut(s) 148
GsuI CTGGAG 1 cut(s) 116
HapII CCGG 1 cut(s) 181
HhaI GCGC 2 cut(s) 169, 299
Hin6I GCGC 2 cut(s) 167, 297
HinP1I GCGC 2 cut(s) 167, 297
HinfI GANTC 2 cut(s) 59, 201
HpaII CCGG 1 cut(s) 181
Hpy188III TCNNGA 2 cut(s) 181, 226
HpyCH4V TGCA 1 cut(s) 176
HpyF10VI GCNNNNNNNGC 3 cut(s) 160, 173, 309
HpyF3I CTNAG 1 cut(s) 39
HspAI GCGC 2 cut(s) 167, 297
Kpn2I TCCGGA 1 cut(s) 180
LpnPI CCDG 7 cut(s) 2, 41, 80, 130, 194, 199, 239
Lsp1109I GCAGC 1 cut(s) 301
LweI GCATC 2 cut(s) 70, 121
MaeI CTAG 2 cut(s) 309, 313
MboII GAAGA 1 cut(s) 241
MluCI AATT 3 cut(s) 158, 259, 275
MnlI CCTC 4 cut(s) 91, 94, 186, 235
MroI TCCGGA 1 cut(s) 180
MroXI GAANNNNTTC 1 cut(s) 233
MseI TTAA 2 cut(s) 114, 156
MspI CCGG 1 cut(s) 181
MvnI CGCG 2 cut(s) 297, 299
MwoI GCNNNNNNNGC 3 cut(s) 160, 173, 309
NsbI TGCGCA 1 cut(s) 168
PdmI GAANNNNTTC 1 cut(s) 233
PfeI GAWTC 2 cut(s) 59, 201
PkrI GCNGC 1 cut(s) 291
PshBI ATTAAT 1 cut(s) 114
PspFI CCCAGC 1 cut(s) 144
PspPI GGNCC 1 cut(s) 183
RsaI GTAC 2 cut(s) 54, 246
RsaNI GTAC 2 cut(s) 53, 245
SaqAI TTAA 2 cut(s) 114, 156
SatI GCNGC 1 cut(s) 290
Sau96I GGNCC 1 cut(s) 183
SetI ASST 5 cut(s) 72, 96, 213, 246, 314
SfaNI GCATC 2 cut(s) 70, 121
SinI GGWCC 1 cut(s) 183
Sse9I AATT 3 cut(s) 158, 259, 275
SsiI CCGC 2 cut(s) 287, 299
SspMI CTAG 2 cut(s) 309, 313
TasI AATT 3 cut(s) 158, 259, 275
TatI WGTACW 1 cut(s) 52
TfiI GAWTC 2 cut(s) 59, 201
Tru1I TTAA 2 cut(s) 114, 156
Tru9I TTAA 2 cut(s) 114, 156
TseI GCWGC 1 cut(s) 289
VpaK11BI GGWCC 1 cut(s) 183
VspI ATTAAT 1 cut(s) 114
XapI RAATTY 2 cut(s) 259, 275
XmnI GAANNNNTTC 1 cut(s) 233
XspI CTAG 2 cut(s) 309, 313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.