pycom07g14470

Mitogen-activated protein kinase kinase kinase 7-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
16406783 .. 16407592
810 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g14470.1

Sequence Viewer

Length: 810 bp
ATGGAACTGATGAGTAGAGACCTCTGCAGCTACATCAAAGAGATCTGTGGCCCCCGAAAACGTCTTCCATTTTCTCTTCCTGTTGCTATTGATCTGATGCTTCAAATTGCAAGAGGAATGGAATATCTCCACTCAAAGAAAATCTACCACGGAGATTTGGATCCTTCTAACATACTTGTTAAACCAAGAGGCATCTCCACAGAAGGTTACTTGCAAGCCAAGGTTTCAGGTTTTGGTTTAGCTTATGTCAATATCTCCCACCACAAAAACCCTTCAAATCATAGTGGAAGCCTGTCTTTCATCTGGTATGCGCCGGAAGTTCTAGAAGAGCAAGAACAAGGAAAAAGTACTGAGAAAAAGTACACAGAAAAGTCCGATATGTATAGCTTTGGAATGGTTTGCTTTGAACTCCTGACAGGGAAAGTCCCTTTTGAGGATAGTCATCTTCAAGGGGACAAGATGAGCCGAAACATAAGGGCGGGGGAGAGGCCGCTGTTTCCGTTCTATTCTCTGAGATATGTGACCAACCTCACAAAGAAATGTTGGCATAGTGACCCCAATCAACGGCCAAGTTTCTCATCCATTTGTAGGATTCTTCGCTACATTAAACGGTTCCTTGCGATGAATCCTGATTACAACAACCAGCTAGACCCGCCTGTTCCTATGGTAGATTACTGTGAGATTGAGTCTGGGCTTCTGAGAAAGATTCCTTCTTGGGGGAGTTCTGAACCATCACCAATATCACAAATCCCATTCCAAATGTTCGTTTACAGGATCGATCAGAGAGAGAAAGAACGTCTTCAAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

270

Amino Acids

31.1

Weight (kDa)

8.77

Isoelectric Point (pI)

57.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 2 - 196 2e-28 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 21 - 198 2.3e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G01450
fragaria_vesca FvH4_7g15980
malus_domestica MD01G1076300.v1.1 MD07G1145200.v1.1
prunus_persica Prupe.2G183700_v2.0.a1 Prupe.2G183700_v2.0.a1
pyrus_communis pycom07g14470
rosa_chinensis RchiOBHm_Chr1g0358861
rosa_laevigata RLG00000027921
rosa_multiflora Rmu_sc0008757.1_g000014
rosa_roxburghii Rroxscaffold_4G00297570
rosa_rugosa Rorug01G0265700
rosa_samantha Rh1AG279600 Rh1BG246400 Rh1CG263800 Rh1DG274800
rosa_wichuraiana Rw1G024860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 479, 491, 653
AclWI GGATC 3 cut(s) 155, 168, 782
AcoI YGGCCR 1 cut(s) 566
AfaI GTAC 2 cut(s) 349, 362
AfiI CCNNNNNNNGG 4 cut(s) 433, 564, 588, 716
AgsI TTSAA 5 cut(s) 104, 276, 407, 449, 803
AluBI AGCT 4 cut(s) 30, 242, 387, 646
AluI AGCT 4 cut(s) 30, 242, 387, 646
Alw26I GTCTC 1 cut(s) 12
AlwI GGATC 3 cut(s) 155, 168, 782
AoxI GGCC 3 cut(s) 49, 488, 566
ApeKI GCWGC 1 cut(s) 27
Asp700I GAANNNNTTC 1 cut(s) 798
AspLEI GCGC 1 cut(s) 313
AspS9I GGNCC 1 cut(s) 50
AsuHPI GGTGA 1 cut(s) 726
BamHI GGATCC 1 cut(s) 160
BbsI GAAGAC 2 cut(s) 56, 791
BbvI GCAGC 1 cut(s) 39
BccI CCATC 1 cut(s) 739
BceAI ACGGC 1 cut(s) 581
BcoDI GTCTC 1 cut(s) 12
BfaI CTAG 2 cut(s) 323, 647
BfmI CTRYAG 1 cut(s) 25
BglII AGATCT 1 cut(s) 42
BisI GCNGC 2 cut(s) 28, 491
BlsI GCNGC 2 cut(s) 29, 492
BmcAI AGTACT 1 cut(s) 349
BmgT120I GGNCC 1 cut(s) 50
BmiI GGNNCC 3 cut(s) 52, 162, 614
BmsI GCATC 2 cut(s) 87, 201
BpiI GAAGAC 2 cut(s) 56, 791
Bsa29I ATCGAT 1 cut(s) 777
BsaBI GATNNNNATC 2 cut(s) 159, 441
BsaI GGTCTC 1 cut(s) 12
BsaJI CCNNGG 2 cut(s) 148, 219
Bsc4I CCNNNNNNNGG 4 cut(s) 433, 564, 588, 716
Bse8I GATNNNNATC 2 cut(s) 159, 441
BseCI ATCGAT 1 cut(s) 777
BseDI CCNNGG 2 cut(s) 148, 219
BseGI GGATG 1 cut(s) 578
BseJI GATNNNNATC 2 cut(s) 159, 441
BseLI CCNNNNNNNGG 4 cut(s) 433, 564, 588, 716
BseMII CTCAG 3 cut(s) 342, 503, 689
BseXI GCAGC 1 cut(s) 39
BshFI GGCC 3 cut(s) 51, 490, 568
BshVI ATCGAT 1 cut(s) 777
BsiSI CCGG 1 cut(s) 314
BslFI GGGAC 2 cut(s) 410, 467
BslI CCNNNNNNNGG 4 cut(s) 433, 564, 588, 716
BsmAI GTCTC 1 cut(s) 12
BsmFI GGGAC 2 cut(s) 410, 467
BsnI GGCC 3 cut(s) 51, 490, 568
Bso31I GGTCTC 1 cut(s) 12
Bsp143I GATC 5 cut(s) 42, 91, 160, 774, 778
BspACI CCGC 3 cut(s) 479, 491, 653
BspANI GGCC 3 cut(s) 51, 490, 568
BspCNI CTCAG 3 cut(s) 343, 504, 690
BspDI ATCGAT 1 cut(s) 777
BspLI GGNNCC 3 cut(s) 52, 162, 614
BspMAI CTGCAG 1 cut(s) 29
BspPI GGATC 3 cut(s) 155, 168, 782
BspQI GCTCTTC 1 cut(s) 321
BspTNI GGTCTC 1 cut(s) 12
BssECI CCNNGG 2 cut(s) 148, 219
BssMI GATC 5 cut(s) 42, 91, 160, 774, 778
BssT1I CCWWGG 1 cut(s) 219
Bst4CI ACNGT 2 cut(s) 612, 677
Bst6I CTCTTC 2 cut(s) 81, 321
BstC8I GCNNGC 1 cut(s) 216
BstDEI CTNAG 3 cut(s) 351, 512, 698
BstDSI CCRYGG 1 cut(s) 148
BstF5I GGATG 1 cut(s) 578
BstHHI GCGC 1 cut(s) 313
BstKTI GATC 5 cut(s) 45, 94, 163, 777, 781
BstMAI GTCTC 1 cut(s) 12
BstMBI GATC 5 cut(s) 42, 91, 160, 774, 778
BstMWI GCNNNNNNNGC 1 cut(s) 652
BstSFI CTRYAG 1 cut(s) 25
BstV1I GCAGC 1 cut(s) 39
BstV2I GAAGAC 2 cut(s) 56, 791
BstX2I RGATCY 2 cut(s) 42, 160
BstYI RGATCY 2 cut(s) 42, 160
Bsu15I ATCGAT 1 cut(s) 777
BsuRI GGCC 3 cut(s) 51, 490, 568
BsuTUI ATCGAT 1 cut(s) 777
BtgI CCRYGG 1 cut(s) 148
BtgZI GCGATG 1 cut(s) 635
BtsCI GGATG 1 cut(s) 578
Cac8I GCNNGC 1 cut(s) 216
CfoI GCGC 1 cut(s) 313
Cfr13I GGNCC 1 cut(s) 50
ClaI ATCGAT 1 cut(s) 777
Csp6I GTAC 2 cut(s) 348, 361
CviQI GTAC 2 cut(s) 348, 361
DdeI CTNAG 3 cut(s) 351, 512, 698
DpnI GATC 5 cut(s) 44, 93, 162, 776, 780
DpnII GATC 5 cut(s) 42, 91, 160, 774, 778
EaeI YGGCCR 1 cut(s) 566
Eam1104I CTCTTC 2 cut(s) 81, 321
EarI CTCTTC 2 cut(s) 81, 321
Eco130I CCWWGG 1 cut(s) 219
Eco31I GGTCTC 1 cut(s) 12
EcoT14I CCWWGG 1 cut(s) 219
ErhI CCWWGG 1 cut(s) 219
FalI AAGNNNNNCTT 3 cut(s) 280, 312, 783
FaqI GGGAC 2 cut(s) 410, 467
FauI CCCGC 2 cut(s) 472, 660
Fnu4HI GCNGC 2 cut(s) 28, 491
FokI GGATG 1 cut(s) 565
Fsp4HI GCNGC 2 cut(s) 28, 491
FspBI CTAG 2 cut(s) 323, 647
GlaI GCGC 1 cut(s) 312
GluI GCNGC 2 cut(s) 28, 491
HaeIII GGCC 3 cut(s) 51, 490, 568
HapII CCGG 1 cut(s) 314
HhaI GCGC 1 cut(s) 313
Hin6I GCGC 1 cut(s) 311
HinP1I GCGC 1 cut(s) 311
HinfI GANTC 4 cut(s) 592, 625, 686, 706
HpaII CCGG 1 cut(s) 314
HphI GGTGA 1 cut(s) 726
Hpy166II GTNNAC 2 cut(s) 363, 769
Hpy188I TCNGA 6 cut(s) 96, 376, 513, 699, 727, 783
Hpy188III TCNNGA 3 cut(s) 323, 412, 629
Hpy8I GTNNAC 2 cut(s) 363, 769
HpyAV CCTTC 4 cut(s) 174, 197, 282, 720
HpyCH4III ACNGT 2 cut(s) 612, 677
HpyCH4IV ACGT 2 cut(s) 61, 796
HpyCH4V TGCA 3 cut(s) 27, 110, 214
HpyF10VI GCNNNNNNNGC 1 cut(s) 652
HpyF3I CTNAG 3 cut(s) 351, 512, 698
HpySE526I ACGT 2 cut(s) 61, 796
HspAI GCGC 1 cut(s) 311
Kzo9I GATC 5 cut(s) 42, 91, 160, 774, 778
LguI GCTCTTC 1 cut(s) 321
Lsp1109I GCAGC 1 cut(s) 39
LweI GCATC 2 cut(s) 87, 201
MaeI CTAG 2 cut(s) 323, 647
MaeII ACGT 2 cut(s) 61, 796
MaeIII GTNAC 3 cut(s) 206, 520, 551
MalI GATC 5 cut(s) 44, 93, 162, 776, 780
MboI GATC 5 cut(s) 42, 91, 160, 774, 778
MboII GAAGA 6 cut(s) 56, 68, 338, 437, 587, 791
MflI RGATCY 2 cut(s) 42, 160
MluCI AATT 1 cut(s) 105
MlyI GAGTC 1 cut(s) 695
MnlI CCTC 6 cut(s) 32, 107, 182, 427, 480, 539
MroXI GAANNNNTTC 1 cut(s) 798
MseI TTAA 2 cut(s) 180, 606
MspA1I CMGCKG 1 cut(s) 493
MspI CCGG 1 cut(s) 314
MwoI GCNNNNNNNGC 1 cut(s) 652
NdeII GATC 5 cut(s) 42, 91, 160, 774, 778
NlaIV GGNNCC 3 cut(s) 52, 162, 614
NmuCI GTSAC 2 cut(s) 520, 551
PciSI GCTCTTC 1 cut(s) 321
PdmI GAANNNNTTC 1 cut(s) 798
PfeI GAWTC 3 cut(s) 592, 625, 706
PkrI GCNGC 2 cut(s) 29, 492
PleI GAGTC 1 cut(s) 694
PpsI GAGTC 1 cut(s) 694
PspN4I GGNNCC 3 cut(s) 52, 162, 614
PspPI GGNCC 1 cut(s) 50
PstI CTGCAG 1 cut(s) 29
PsuI RGATCY 2 cut(s) 42, 160
RsaI GTAC 2 cut(s) 349, 362
RsaNI GTAC 2 cut(s) 348, 361
SapI GCTCTTC 1 cut(s) 321
SaqAI TTAA 2 cut(s) 180, 606
SatI GCNGC 2 cut(s) 28, 491
Sau3AI GATC 5 cut(s) 42, 91, 160, 774, 778
Sau96I GGNCC 1 cut(s) 50
ScaI AGTACT 1 cut(s) 349
SchI GAGTC 1 cut(s) 695
SfaNI GCATC 2 cut(s) 87, 201
SfcI CTRYAG 1 cut(s) 25
Sse9I AATT 1 cut(s) 105
SsiI CCGC 3 cut(s) 479, 491, 653
SspMI CTAG 2 cut(s) 323, 647
StyI CCWWGG 1 cut(s) 219
TaaI ACNGT 2 cut(s) 612, 677
TaiI ACGT 2 cut(s) 64, 799
TaqI TCGA 1 cut(s) 777
TasI AATT 1 cut(s) 105
TatI WGTACW 2 cut(s) 347, 360
TauI GCSGC 1 cut(s) 493
TfiI GAWTC 3 cut(s) 592, 625, 706
Tru1I TTAA 2 cut(s) 180, 606
Tru9I TTAA 2 cut(s) 180, 606
TseFI GTSAC 2 cut(s) 520, 551
TseI GCWGC 1 cut(s) 27
Tsp45I GTSAC 2 cut(s) 520, 551
TspDTI ATGAA 2 cut(s) 289, 638
TspGWI ACGGA 2 cut(s) 165, 489
XbaI TCTAGA 1 cut(s) 322
XmnI GAANNNNTTC 1 cut(s) 798
XspI CTAG 2 cut(s) 323, 647
ZrmI AGTACT 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.