Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0011690

Physical Location & Seq

Genomic Coordinates Forward (+)

19334957 .. 19337369

Gene Structure 2413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g16840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGATTACAGTTATGGATTCTGTAAGAGAACCATTGAGGAGCAACTCAGAGAAATGGCTGGATTCTCAATTCTGGCACGCCTGCGCCGGCGGCATGGTTCAAATGCCGCCCATTAACTCTAAAGTCTTCTACTTTCCTCAGGGCCATGCTGAGTACACCCATGGGAAAGTGGATTTTGGGAATTCTAGAATTCCACCACTCATTCTCTCCAAGATATCTGCTATCAGATACATGGCAGATCCCGAAACGGATGAGGTTTTTGCGAAAATGAGGCTGATTCCGGTGAGAGAGAGTGGTTTTGATCTTGAGGATGATGGGTTTGTGGGAAACAATGGAACAGTTGAGAATCCGGAGAAACCCACATCATTTGCCAAGACATTGACCCAATCTGATGCTAACAATGGGGGAGGCTTCTCTGTGCCTCGTTACTGTGCGGAGACCATCTTCCCGCGCTTGGATTACTCGGCTGAGCCTCCTGTTCAGACCATTCTTGCAAAGGATGTGCATGGCGAGATTTGGAAGTTTAGGCATATCTATAGAGGTACTCCTCGGCGTCACCTATTGACAACGGGGTGGAGTAATTTCGTGAATCAGAAGAAGCTTGTTGCTGGGGATTCCATTGTGTTTTTCAGAGCGGAAAATGGTGATCTCTGTGTTGGGATTAGAAGGGCTAAGAGGGGAATTGGCGGTGGACCTGAATACCCATCTGGATGGAATACTACTGCTGGAAATTCTGGCTCTGAATATGGGGGTTATTCTGGCTTTTCAAGGGAGAATGGTAATAAAGTGTTTGAAAAAGGTTCGAGTGATGACGCCAAGGGAAAAATGAGGGCTGAATATGTTATAGAAGCTGCAACTCATGCTGCCAATGGCCAGCCCTTTGAGGTTGTGTACTATCCCCGTGAAAGCACACCGGAGTTTTGTGTTAAGGCTTCAGCTGTGAGAGATGCAATGCAAATACGGTGGTGCTCAGGAATGAGGTTCAAAATGCCCTTTGAAACTGAGGATTATTCACGGATAAGCTGGTTCTTGGGAACCGTATCTTCTATTCAGGTTGCAGATCCCATCTGTTGGCCCGAGTCTCCATGGCGTCTTCTACAGGTTTCATGGGATGAGCCAGATTTGCTCCAAAATGTGAAACGTGTTAGCCCATGGTTGGTTGAATTGGTACCGAGCATACCATCCATCCATCCATCTCCCTTCTCGCCTCCAAGAAAGAAGTTGCGGCTTCAACATAACCCAGACTATTCCCTTGTTGGCCAACTTTCCGTGCCATCAGTTTGTAGCAACTTCCTAAATTCGAGCAACCCCTTATGTAATGTATCGGACAACCAATCTGCAGGCATACAGGGAGCCAGGCAAGCTCAGTTTGGACTATCTTCATCGGAGCTCTTCTTCAACAAATTGCAATCGGGTCTGTTTCCAATTGGGTTTCAACAACTTGGTCATTTTGCCCCTCTTGAAACCATTGGGGGCAGCTTTATGCGCAAAGCTGAAAGCAATGATAATATCTCTTGTTGTCCCACTCAAAGTTTGAAGGATAATGATGAGATAAAGACACCTCACATAGTATTATTCGGTCAGCTAATTGTTACAGGGCAACATATATCTAAGAGCTCATCCGGTGATGATTCAGATGGACATCCAAAGAAAGCAACAAATTGTTCTGATGGCTCTGGTTCTACGTCACATCGCCATGGTTCAGTGGAAAATTGTTCTGATGGAGGGTCTCCTTGGAAGACAGATGACAGCGATCTTAGTTTGGAGACTGGTTATTGCAAAGTGTGTATTGATTCAGGGGATGTGGGGACTCTTGATCTCTCTGTCCTTAGATCATACCAAGAATTGTATGGAAAGCTAGCTGGTATGTTTGGCAAAGAAAGTTCAAAGATGTTAAGAAATGTGCTCTACCGAGATGCATCAGGTGTTGTTAAACACACCGGAGACGAGCCATTCGGTGACTTTTTGAAGACGGCAAAAAGACTTTATATGGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035198 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048829 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0061980 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

666

Amino Acids

73.4

Weight (kDa)

6.37

Isoelectric Point (pI)

46.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	123 - 224	2.1e-22	B3 DNA binding domain
BRWD_AD	PF25313	285 - 388	4.2e-08	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	307 - 390	2.5e-32	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011690)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30080
fragaria_vesca	FvH4_7g19350 FvH4_7g19350
malus_domestica	MD01G1108100.v1.1 MD07G1174000.v1.1
prunus_persica	Prupe.2G213000_v2.0.a1 Prupe.2G213000_v2.0.a1
pyrus_communis	pycom01g13500 pycom07g16840
rosa_chinensis	RchiOBHm_Chr1g0363241
rosa_laevigata	RLG00000027580
rosa_multiflora	Rmu_sc0004027.1_g000014
rosa_roxburghii	Rroxscaffold_4G00293300
rosa_rugosa	Rorug01G0305700
rosa_samantha	Rh1AG314600 Rh1BG278100 Rh1CG294500 Rh1DG308900
rosa_wichuraiana	Rw1G027880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1487
Acc65I	GGTACC	1 cut(s)	1168
AccB1I	GGYRCC	1 cut(s)	1168
AccB7I	CCANNNNNTGG	1 cut(s)	1071
AccBSI	CCGCTC	1 cut(s)	635
AccII	CGCG	1 cut(s)	451
AccIII	TCCGGA	1 cut(s)	349
AciI	CCGC	7 cut(s)	90, 107, 434, 449, 635, 687, 1225
AclWI	GGATC	2 cut(s)	233, 1055
AcoI	YGGCCR	2 cut(s)	871, 1258
AcsI	RAATTY	4 cut(s)	181, 189, 730, 1297
AcuI	CTGAAG	1 cut(s)	918
AcyI	GRCGYC	3 cut(s)	553, 813, 1090
AfaI	GTAC	4 cut(s)	155, 544, 893, 1170
AfiI	CCNNNNNNNGG	3 cut(s)	454, 1071, 1156
AflIII	ACRYGT	1 cut(s)	1141
AjnI	CCWGG	1 cut(s)	1355
Alw21I	GWGCWC	4 cut(s)	971, 1392, 1619, 1908
Alw26I	GTCTC	5 cut(s)	431, 1086, 1734, 1760, 1938
AlwI	GGATC	2 cut(s)	233, 1055
Ama87I	CYCGRG	1 cut(s)	1076
Aor13HI	TCCGGA	1 cut(s)	349
AoxI	GGCC	4 cut(s)	142, 871, 1073, 1258
ApeKI	GCWGC	3 cut(s)	851, 863, 1476
ApoI	RAATTY	4 cut(s)	181, 189, 730, 1297
ArsI	GACNNNNNNTTYG	2 cut(s)	1937, 1969
Asp718I	GGTACC	1 cut(s)	1168
AspLEI	GCGC	3 cut(s)	86, 453, 1488
AspS9I	GGNCC	3 cut(s)	142, 692, 1074
AsuHPI	GGTGA	5 cut(s)	295, 548, 656, 1637, 1970
AsuNHI	GCTAGC	1 cut(s)	1858
AvaI	CYCGRG	1 cut(s)	1076
AvaII	GGWCC	1 cut(s)	692
AxyI	CCTNAGG	1 cut(s)	138
BalI	TGGCCA	2 cut(s)	873, 1260
BanI	GGYRCC	1 cut(s)	1168
BanII	GRGCYC	2 cut(s)	1392, 1619
BbsI	GAAGAC	4 cut(s)	118, 1085, 1745, 1976
Bbv12I	GWGCWC	4 cut(s)	971, 1392, 1619, 1908
BbvI	GCAGC	3 cut(s)	838, 850, 1488
BceAI	ACGGC	1 cut(s)	1989
BciT130I	CCWGG	1 cut(s)	1357
BcoDI	GTCTC	5 cut(s)	431, 1086, 1734, 1760, 1938
BfaI	CTAG	2 cut(s)	186, 1859
BfmI	CTRYAG	3 cut(s)	535, 1097, 1338
BisI	GCNGC	6 cut(s)	91, 107, 852, 864, 1226, 1477
BlpI	GCTNAGC	1 cut(s)	468
BlsI	GCNGC	6 cut(s)	92, 108, 853, 865, 1227, 1478
Bme1390I	CCNGG	1 cut(s)	1357
Bme18I	GGWCC	1 cut(s)	692
BmeT110I	CYCGRG	1 cut(s)	1076
BmgT120I	GGNCC	3 cut(s)	142, 692, 1074
BmiI	GGNNCC	3 cut(s)	1036, 1170, 1354
BmrFI	CCNGG	1 cut(s)	1357
BmsI	GCATC	4 cut(s)	382, 937, 1906, 1928
BmtI	GCTAGC	1 cut(s)	1862
BpiI	GAAGAC	4 cut(s)	118, 1085, 1745, 1976
Bpu10I	CCTNAGC	1 cut(s)	970
Bpu1102I	GCTNAGC	1 cut(s)	468
BpuEI	CTTGAG	1 cut(s)	326
BsaBI	GATNNNNATC	1 cut(s)	1641
BsaHI	GRCGYC	3 cut(s)	553, 813, 1090
BsaI	GGTCTC	2 cut(s)	431, 1734
BsaJI	CCNNGG	7 cut(s)	160, 548, 816, 1085, 1151, 1696, 1733
BsaWI	WCCGGW	5 cut(s)	280, 349, 913, 1622, 1940
Bsc4I	CCNNNNNNNGG	3 cut(s)	454, 1071, 1156
Bse118I	RCCGGY	1 cut(s)	86
Bse1I	ACTGG	1 cut(s)	1774
Bse21I	CCTNAGG	1 cut(s)	138
Bse3DI	GCAATG	2 cut(s)	957, 1507
Bse8I	GATNNNNATC	1 cut(s)	1641
BseAI	TCCGGA	1 cut(s)	349
BseBI	CCWGG	1 cut(s)	1357
BseDI	CCNNGG	7 cut(s)	160, 548, 816, 1085, 1151, 1696, 1733
BseJI	GATNNNNATC	1 cut(s)	1641
BseLI	CCNNNNNNNGG	3 cut(s)	454, 1071, 1156
BseMI	GCAATG	2 cut(s)	957, 1507
BseMII	CTCAG	7 cut(s)	60, 141, 152, 459, 984, 993, 1379
BseNI	ACTGG	1 cut(s)	1774
BseRI	GAGGAG	2 cut(s)	52, 537
BseXI	GCAGC	3 cut(s)	838, 850, 1488
BseYI	CCCAGC	1 cut(s)	608
Bsh1236I	CGCG	1 cut(s)	451
BshFI	GGCC	4 cut(s)	144, 873, 1075, 1260
BshNI	GGYRCC	1 cut(s)	1168
BsiHKAI	GWGCWC	4 cut(s)	971, 1392, 1619, 1908
BsiHKCI	CYCGRG	1 cut(s)	1076
BsiSI	CCGG	6 cut(s)	87, 281, 350, 914, 1623, 1941
BslFI	GGGAC	2 cut(s)	1506, 1822
BslI	CCNNNNNNNGG	3 cut(s)	454, 1071, 1156
BsmAI	GTCTC	5 cut(s)	431, 1086, 1734, 1760, 1938
BsmBI	CGTCTC	1 cut(s)	1938
BsmFI	GGGAC	2 cut(s)	1506, 1822
BsnI	GGCC	4 cut(s)	144, 873, 1075, 1260
Bso31I	GGTCTC	2 cut(s)	431, 1734
BsoBI	CYCGRG	1 cut(s)	1076
Bsp1286I	GDGCHC	4 cut(s)	971, 1392, 1619, 1908
Bsp13I	TCCGGA	1 cut(s)	349
Bsp143I	GATC	7 cut(s)	238, 301, 646, 1060, 1753, 1816, 1832
Bsp1720I	GCTNAGC	1 cut(s)	468
Bsp19I	CCATGG	4 cut(s)	160, 1085, 1151, 1696
BspACI	CCGC	7 cut(s)	90, 107, 434, 449, 635, 687, 1225
BspANI	GGCC	4 cut(s)	144, 873, 1075, 1260
BspCNI	CTCAG	7 cut(s)	59, 142, 151, 460, 983, 994, 1378
BspEI	TCCGGA	1 cut(s)	349
BspFNI	CGCG	1 cut(s)	451
BspLI	GGNNCC	3 cut(s)	1036, 1170, 1354
BspMAI	CTGCAG	1 cut(s)	1342
BspOI	GCTAGC	1 cut(s)	1862
BspPI	GGATC	2 cut(s)	233, 1055
BspQI	GCTCTTC	1 cut(s)	1397
BspT107I	GGYRCC	1 cut(s)	1168
BspTNI	GGTCTC	2 cut(s)	431, 1734
BsrBI	CCGCTC	1 cut(s)	635
BsrDI	GCAATG	2 cut(s)	957, 1507
BsrFI	RCCGGY	1 cut(s)	86
BsrI	ACTGG	1 cut(s)	1774
BssAI	RCCGGY	1 cut(s)	86
BssECI	CCNNGG	7 cut(s)	160, 548, 816, 1085, 1151, 1696, 1733
BssMI	GATC	7 cut(s)	238, 301, 646, 1060, 1753, 1816, 1832
BssNI	GRCGYC	3 cut(s)	553, 813, 1090
BssT1I	CCWWGG	6 cut(s)	160, 816, 1085, 1151, 1696, 1733
Bst2UI	CCWGG	1 cut(s)	1357
Bst4CI	ACNGT	5 cut(s)	10, 340, 431, 963, 1039
Bst6I	CTCTTC	1 cut(s)	1397
BstACI	GRCGYC	3 cut(s)	553, 813, 1090
BstAPI	GCANNNNNTGC	1 cut(s)	860
BstC8I	GCNNGC	7 cut(s)	78, 82, 88, 875, 1342, 1362, 1860
BstDSI	CCRYGG	4 cut(s)	160, 1085, 1151, 1696
BstFNI	CGCG	1 cut(s)	451
BstHHI	GCGC	3 cut(s)	86, 453, 1488
BstKTI	GATC	7 cut(s)	241, 304, 649, 1063, 1756, 1819, 1835
BstMAI	GTCTC	5 cut(s)	431, 1086, 1734, 1760, 1938
BstMBI	GATC	7 cut(s)	238, 301, 646, 1060, 1753, 1816, 1832
BstMWI	GCNNNNNNNGC	5 cut(s)	90, 860, 1123, 1361, 1485
BstNI	CCWGG	1 cut(s)	1357
BstSCI	CCNGG	1 cut(s)	1355
BstSFI	CTRYAG	3 cut(s)	535, 1097, 1338
BstUI	CGCG	1 cut(s)	451
BstV1I	GCAGC	3 cut(s)	838, 850, 1488
BstV2I	GAAGAC	4 cut(s)	118, 1085, 1745, 1976
BstX2I	RGATCY	2 cut(s)	238, 1060
BstXI	CCANNNNNNTGG	1 cut(s)	711
BstYI	RGATCY	2 cut(s)	238, 1060
Bsu36I	CCTNAGG	1 cut(s)	138
BsuRI	GGCC	4 cut(s)	144, 873, 1075, 1260
BtgI	CCRYGG	4 cut(s)	160, 1085, 1151, 1696
BtgZI	GCGATG	1 cut(s)	1676
BtsIMutI	CAGTG	1 cut(s)	1710
Cac8I	GCNNGC	7 cut(s)	78, 82, 88, 875, 1342, 1362, 1860
CfoI	GCGC	3 cut(s)	86, 453, 1488
Cfr10I	RCCGGY	1 cut(s)	86
Cfr13I	GGNCC	3 cut(s)	142, 692, 1074
CseI	GACGC	3 cut(s)	542, 821, 1079
Csp6I	GTAC	4 cut(s)	154, 543, 892, 1169
CspCI	CAANNNNNGTGG	4 cut(s)	349, 384, 944, 979
CviQI	GTAC	4 cut(s)	154, 543, 892, 1169
DpnI	GATC	7 cut(s)	240, 303, 648, 1062, 1755, 1818, 1834
DpnII	GATC	7 cut(s)	238, 301, 646, 1060, 1753, 1816, 1832
EaeI	YGGCCR	2 cut(s)	871, 1258
Eam1104I	CTCTTC	1 cut(s)	1397
EarI	CTCTTC	1 cut(s)	1397
Ecl136II	GAGCTC	2 cut(s)	1390, 1617
Eco130I	CCWWGG	6 cut(s)	160, 816, 1085, 1151, 1696, 1733
Eco24I	GRGCYC	2 cut(s)	1392, 1619
Eco31I	GGTCTC	2 cut(s)	431, 1734
Eco32I	GATATC	1 cut(s)	216
Eco47I	GGWCC	1 cut(s)	692
Eco53kI	GAGCTC	2 cut(s)	1390, 1617
Eco57I	CTGAAG	1 cut(s)	918
Eco81I	CCTNAGG	1 cut(s)	138
Eco88I	CYCGRG	1 cut(s)	1076
EcoICRI	GAGCTC	2 cut(s)	1390, 1617
EcoRI	GAATTC	2 cut(s)	181, 189
EcoRII	CCWGG	1 cut(s)	1355
EcoRV	GATATC	1 cut(s)	216
EcoT14I	CCWWGG	6 cut(s)	160, 816, 1085, 1151, 1696, 1733
EcoT22I	ATGCAT	1 cut(s)	1921
EcoT38I	GRGCYC	2 cut(s)	1392, 1619
ErhI	CCWWGG	6 cut(s)	160, 816, 1085, 1151, 1696, 1733
Esp3I	CGTCTC	1 cut(s)	1938
FaqI	GGGAC	2 cut(s)	1506, 1822
FauI	CCCGC	1 cut(s)	456
Fnu4HI	GCNGC	6 cut(s)	91, 107, 852, 864, 1226, 1477
FriOI	GRGCYC	2 cut(s)	1392, 1619
Fsp4HI	GCNGC	6 cut(s)	91, 107, 852, 864, 1226, 1477
FspBI	CTAG	2 cut(s)	186, 1859
FspI	TGCGCA	1 cut(s)	1487
GlaI	GCGC	3 cut(s)	85, 452, 1487
GluI	GCNGC	6 cut(s)	91, 107, 852, 864, 1226, 1477
GsaI	CCCAGC	1 cut(s)	612
HaeIII	GGCC	4 cut(s)	144, 873, 1075, 1260
HapII	CCGG	6 cut(s)	87, 281, 350, 914, 1623, 1941
HgaI	GACGC	3 cut(s)	542, 821, 1079
HhaI	GCGC	3 cut(s)	86, 453, 1488
Hin1I	GRCGYC	3 cut(s)	553, 813, 1090
Hin6I	GCGC	3 cut(s)	84, 451, 1486
HinP1I	GCGC	3 cut(s)	84, 451, 1486
HindIII	AAGCTT	1 cut(s)	599
HpaII	CCGG	6 cut(s)	87, 281, 350, 914, 1623, 1941
HphI	GGTGA	5 cut(s)	295, 548, 656, 1637, 1970
Hpy166II	GTNNAC	3 cut(s)	156, 692, 892
Hpy188III	TCNNGA	9 cut(s)	186, 242, 305, 350, 586, 708, 972, 1460, 1814
Hpy8I	GTNNAC	3 cut(s)	156, 692, 892
HpyAV	CCTTC	3 cut(s)	660, 1210, 1531
HpyCH4III	ACNGT	5 cut(s)	10, 340, 431, 963, 1039
HpyCH4IV	ACGT	2 cut(s)	1141, 1685
HpyF10VI	GCNNNNNNNGC	5 cut(s)	90, 860, 1123, 1361, 1485
HpySE526I	ACGT	2 cut(s)	1141, 1685
Hsp92I	GRCGYC	3 cut(s)	553, 813, 1090
HspAI	GCGC	3 cut(s)	84, 451, 1486
Kpn2I	TCCGGA	1 cut(s)	349
KpnI	GGTACC	1 cut(s)	1172
KroI	GCCGGC	1 cut(s)	86
KroNI	GCCGGC	1 cut(s)	88
Kzo9I	GATC	7 cut(s)	238, 301, 646, 1060, 1753, 1816, 1832
LguI	GCTCTTC	1 cut(s)	1397
LmnI	GCTCC	4 cut(s)	39, 1131, 1352, 1387
Lsp1109I	GCAGC	3 cut(s)	838, 850, 1488
LweI	GCATC	4 cut(s)	382, 937, 1906, 1928
MaeI	CTAG	2 cut(s)	186, 1859
MaeII	ACGT	2 cut(s)	1141, 1685
MaeIII	GTNAC	5 cut(s)	425, 554, 1591, 1686, 1958
MalI	GATC	7 cut(s)	240, 303, 648, 1062, 1755, 1818, 1834
MbiI	CCGCTC	1 cut(s)	635
MboI	GATC	7 cut(s)	238, 301, 646, 1060, 1753, 1816, 1832
MfeI	CAATTG	1 cut(s)	1425
MflI	RGATCY	2 cut(s)	238, 1060
MhlI	GDGCHC	4 cut(s)	971, 1392, 1619, 1908
MlsI	TGGCCA	2 cut(s)	873, 1260
MluNI	TGGCCA	2 cut(s)	873, 1260
MlyI	GAGTC	2 cut(s)	1088, 1804
Mox20I	TGGCCA	2 cut(s)	873, 1260
Mph1103I	ATGCAT	1 cut(s)	1921
MreI	CGCCGGCG	1 cut(s)	86
MroI	TCCGGA	1 cut(s)	349
MroNI	GCCGGC	1 cut(s)	86
MscI	TGGCCA	2 cut(s)	873, 1260
MseI	TTAA	4 cut(s)	114, 927, 1895, 1932
MslI	CAYNNNNRTG	2 cut(s)	709, 1695
Msp20I	TGGCCA	2 cut(s)	873, 1260
MspA1I	CMGCKG	1 cut(s)	938
MspI	CCGG	6 cut(s)	87, 281, 350, 914, 1623, 1941
MspR9I	CCNGG	1 cut(s)	1357
MunI	CAATTG	1 cut(s)	1425
MvaI	CCWGG	1 cut(s)	1357
MvnI	CGCG	1 cut(s)	451
MwoI	GCNNNNNNNGC	5 cut(s)	90, 860, 1123, 1361, 1485
NaeI	GCCGGC	1 cut(s)	88
NcoI	CCATGG	4 cut(s)	160, 1085, 1151, 1696
NdeII	GATC	7 cut(s)	238, 301, 646, 1060, 1753, 1816, 1832
NgoMIV	GCCGGC	1 cut(s)	86
NheI	GCTAGC	1 cut(s)	1858
NlaIV	GGNNCC	3 cut(s)	1036, 1170, 1354
NmeAIII	GCCGAG	2 cut(s)	443, 529
NmuCI	GTSAC	3 cut(s)	554, 1686, 1958
NsbI	TGCGCA	1 cut(s)	1487
NsiI	ATGCAT	1 cut(s)	1921
PciSI	GCTCTTC	1 cut(s)	1397
PdiI	GCCGGC	1 cut(s)	88
PfeI	GAWTC	8 cut(s)	17, 62, 277, 346, 589, 614, 1631, 1793
PflMI	CCANNNNNTGG	1 cut(s)	1071
PkrI	GCNGC	6 cut(s)	92, 108, 853, 865, 1227, 1478
PleI	GAGTC	2 cut(s)	1087, 1804
PpsI	GAGTC	2 cut(s)	1087, 1804
Psp124BI	GAGCTC	2 cut(s)	1392, 1619
Psp6I	CCWGG	1 cut(s)	1355
PspFI	CCCAGC	1 cut(s)	608
PspGI	CCWGG	1 cut(s)	1355
PspN4I	GGNNCC	3 cut(s)	1036, 1170, 1354
PspPI	GGNCC	3 cut(s)	142, 692, 1074
PstI	CTGCAG	1 cut(s)	1342
PsuI	RGATCY	2 cut(s)	238, 1060
PvuII	CAGCTG	1 cut(s)	938
RsaI	GTAC	4 cut(s)	155, 544, 893, 1170
RsaNI	GTAC	4 cut(s)	154, 543, 892, 1169
RseI	CAYNNNNRTG	2 cut(s)	709, 1695
SacI	GAGCTC	2 cut(s)	1392, 1619
SapI	GCTCTTC	1 cut(s)	1397
SaqAI	TTAA	4 cut(s)	114, 927, 1895, 1932
SatI	GCNGC	6 cut(s)	91, 107, 852, 864, 1226, 1477
Sau3AI	GATC	7 cut(s)	238, 301, 646, 1060, 1753, 1816, 1832
Sau96I	GGNCC	3 cut(s)	142, 692, 1074
SchI	GAGTC	2 cut(s)	1088, 1804
ScrFI	CCNGG	1 cut(s)	1357
SduI	GDGCHC	4 cut(s)	971, 1392, 1619, 1908
SfaNI	GCATC	4 cut(s)	382, 937, 1906, 1928
SfcI	CTRYAG	3 cut(s)	535, 1097, 1338
SgrAI	CRCCGGYG	1 cut(s)	86
SinI	GGWCC	1 cut(s)	692
SmiMI	CAYNNNNRTG	2 cut(s)	709, 1695
SmlI	CTYRAG	1 cut(s)	305
SmoI	CTYRAG	1 cut(s)	305
SsiI	CCGC	7 cut(s)	90, 107, 434, 449, 635, 687, 1225
SspMI	CTAG	2 cut(s)	186, 1859
SstI	GAGCTC	2 cut(s)	1392, 1619
StyD4I	CCNGG	1 cut(s)	1355
StyI	CCWWGG	6 cut(s)	160, 816, 1085, 1151, 1696, 1733
TaaI	ACNGT	5 cut(s)	10, 340, 431, 963, 1039
TaiI	ACGT	2 cut(s)	1144, 1688
TaqI	TCGA	2 cut(s)	803, 1301
TaqII	GACCGA	1 cut(s)	1568
TatI	WGTACW	2 cut(s)	153, 891
TauI	GCSGC	3 cut(s)	93, 109, 1228
TfiI	GAWTC	8 cut(s)	17, 62, 277, 346, 589, 614, 1631, 1793
Tru1I	TTAA	4 cut(s)	114, 927, 1895, 1932
Tru9I	TTAA	4 cut(s)	114, 927, 1895, 1932
TscAI	CASTG	1 cut(s)	1710
TseFI	GTSAC	3 cut(s)	554, 1686, 1958
TseI	GCWGC	3 cut(s)	851, 863, 1476
Tsp45I	GTSAC	3 cut(s)	554, 1686, 1958
TspDTI	ATGAA	2 cut(s)	1095, 1371
TspGWI	ACGGA	3 cut(s)	263, 1030, 1258
TspRI	CASTG	1 cut(s)	1710
Van91I	CCANNNNNTGG	1 cut(s)	1071
VpaK11BI	GGWCC	1 cut(s)	692
XapI	RAATTY	4 cut(s)	181, 189, 730, 1297
XbaI	TCTAGA	1 cut(s)	185
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1847
XspI	CTAG	2 cut(s)	186, 1859
Zsp2I	ATGCAT	1 cut(s)	1921

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.