Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0011690

Physical Location & Seq

Genomic Coordinates Reverse (-)

12886539 .. 12888871

Gene Structure 2333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027580

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGAAGAACAACAACAACAACTCAGAGAAAGGTTTGGATTCTCAGTTCTGGCATGCCTGTGCTGGTGGCATGGTTCAAATGCCACCTATTAACTCTAAGGTCTTCTACTTCCCTCAAGGGCATGCAGAGTATGCCCAAGGAGATGTGGATTTCGGGAATTCTCGAATTCCAGCACTCATTCTTTCTAGGATATCTGCTATTAGGTACATGGCAGATCCTGAAACCGATGAGGTTTATGCGAAAATGAGGCTGGTTCCGGTGAGAGAGAGTGGTTTTGATTGTGAGGATGATGGGGTTGTGGGGAATAACAATGGAGTAGTTGAGAATCCTGAGAAACCCACATCTTTTGCTAAGACTTTGACTCAATCTGATGCTAACAATGGGGGAGGGTTCTCTGTGCCTCGCTTCTGCGCGGAGACTATCTTTCCGCGCTTGGATTACTCGGCTGAGCCTCCGGTTCAGACCATTCTTGCAAAGGATGTGCATGGTGAGATTTGGAAGTTTAGGCATATCTATAGAGGTACTCCTCGCCGTCACCTTTTGACAACGGGATGGAGTAATTTTGTGAACAATAAAAAGCTTGTTGCTGGGGATTCGATTGTGTTTTTCCGAGCAGAAAATGGGGATCTTTGTGTGGGGATTAGGAGGGCTAAAAGGGGGATTGGTGGTGGACCTGAGTACCCTTGTGGATGGAACACTCCATCGGGAAATTCTTGCTCTCAGTATGGTGGTTATTCTGGCTTTTCAAGGGAGAATGGAAACAAGTCGATGGAGAAAAATTCTAGTGGGACTACGAGAGGAAGAGTCAGGGCTGAACATGTTATAGAAGCTGCAACTCTTGCTGTCAGTGGCCAGCCCTTTGAGGTTGTGTACTATCCGCGTGCAAGCACACCAGAGTTTTGTGTTAAGGCCTCATCTGTGAGAGCTGCAATGCAAATTCGCTGGTGCTCTGGAATAAGGTTCAAAATGCCTTTTGAAACTGAGGATTCTTCTCGGATAAGCTGGTTCATGGGAACCATATCTTCTGTTCATCATGCAGATCCCCGTTGGCCTGATTCTCCATGGCGCATATTACAGGTTGCATGGGATGAGCCAGATCTGCTCCAAAATGTGAGATGTGTTAGTCCATGGTTGGTCGAATTGGTATCAAGCATACCAGCTATCGATCTCTCTCCCTACTCGCCTCCAAGAAAGAAGTTGCGGCTTCAACAGAACCCAGATTATTCTCTTATTGGCCAACTGCCAATGCCGTCTGTTTATGGCAACTTCCTAAATTCCAGCAACACTTTATGTCATTTATCAGACAACATTCCTGCAGGCATACAGGGAGCCAGGCAAGCTCATTTTGGACTATCTTCATCGAATCTTTTCAACAAACGGCACTCAGGTCTAATTCCAGTTGGCTTTCAGCAACTTGGTCATGTTGTCCCTCCTGGAATCCCTGGAGGTAACTTCATGCGCATTGCTGAAACCAATGAGGACAGCCCTTGCTGCGTTACCGAGGGTATTCCTTACCACAATTTAAAGGATAATGATGAGATAAAGACACCTCACATATTCTTGTTCGGACAGCTAATTGTTTCGGGGCAGCAGATATCAAAGAGCTCCTCTGGTGATGATAGTTCATCAGATCCGGAGAAAACAGGAAATTCTTCTGATGGCTCTGGTTCTGCATTACATCGCAACAGTTCAGTGGAAAATTGCTCTGATGGAGGGTCTCCCTGGGACAAAGACCACCAGAAAAGTGATCACAACTTGGAGACTGGTCTTTGCAAAGTGTATGTTGAATCTGGAGATGCGGGGACCCTTGATCTCTCAGTCTTTAGATCATACCAAGATTTGTACCAAAAGCTGGCCAACATGTTTGGCAAAGAAAATTCAGAGATGCTGCGTAATGTACTGTACCGGGATGCAACAGGTGCTGTTAGGCACACTGGAGATGAACCCTTTAGTGAGTTTTTGAAGACAGCAAGAGGACTTTATATGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035198 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048829 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0061980 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

664

Amino Acids

73.08

Weight (kDa)

6.33

Isoelectric Point (pI)

46.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	116 - 217	2.5e-22	B3 DNA binding domain
BRWD_AD	PF25313	278 - 380	1.3e-10	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	300 - 382	1.3e-31	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011690)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30080
fragaria_vesca	FvH4_7g19350 FvH4_7g19350
malus_domestica	MD01G1108100.v1.1 MD07G1174000.v1.1
prunus_persica	Prupe.2G213000_v2.0.a1 Prupe.2G213000_v2.0.a1
pyrus_communis	pycom01g13500 pycom07g16840
rosa_chinensis	RchiOBHm_Chr1g0363241
rosa_laevigata	RLG00000027580
rosa_multiflora	Rmu_sc0004027.1_g000014
rosa_roxburghii	Rroxscaffold_4G00293300
rosa_rugosa	Rorug01G0305700
rosa_samantha	Rh1AG314600 Rh1BG278100 Rh1CG294500 Rh1DG308900
rosa_wichuraiana	Rw1G027880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1460
AccB7I	CCANNNNNTGG	1 cut(s)	1852
AccII	CGCG	3 cut(s)	413, 430, 880
AccIII	TCCGGA	1 cut(s)	1633
AciI	CCGC	5 cut(s)	413, 428, 878, 1201, 1799
AclWI	GGATC	4 cut(s)	209, 633, 1034, 1625
AcoI	YGGCCR	3 cut(s)	850, 1234, 1854
AcsI	RAATTY	8 cut(s)	157, 165, 709, 778, 936, 1273, 1648, 1876
AfaI	GTAC	7 cut(s)	206, 523, 680, 872, 1844, 1899, 1904
AfiI	CCNNNNNNNGG	1 cut(s)	1852
AflIII	ACRYGT	2 cut(s)	817, 1860
AgsI	TTSAA	8 cut(s)	77, 747, 964, 977, 1208, 1372, 1787, 1963
AjnI	CCWGG	4 cut(s)	1331, 1432, 1441, 1721
AloI	GAACNNNNNNTCC	2 cut(s)	29, 61
AluBI	AGCT	9 cut(s)	580, 830, 926, 1002, 1160, 1340, 1573, 1605, 1852
AluI	AGCT	9 cut(s)	580, 830, 926, 1002, 1160, 1340, 1573, 1605, 1852
Alw21I	GWGCWC	2 cut(s)	950, 1607
Alw26I	GTCTC	3 cut(s)	410, 1722, 1754
AlwI	GGATC	4 cut(s)	209, 633, 1034, 1625
AlwNI	CAGNNNCTG	2 cut(s)	218, 1922
Aor13HI	TCCGGA	1 cut(s)	1633
AoxI	GGCC	5 cut(s)	850, 909, 1049, 1234, 1854
ApeKI	GCWGC	5 cut(s)	830, 926, 1491, 1588, 1888
ApoI	RAATTY	8 cut(s)	157, 165, 709, 778, 936, 1273, 1648, 1876
Asp700I	GAANNNNTTC	2 cut(s)	1367, 1651
AspLEI	GCGC	4 cut(s)	413, 432, 1068, 1461
AspS9I	GGNCC	2 cut(s)	671, 1803
AsuC2I	CCSGG	1 cut(s)	1907
AsuHPI	GGTGA	4 cut(s)	271, 500, 527, 1625
AvaII	GGWCC	2 cut(s)	671, 1803
BaeI	ACNNNNGTAYC	2 cut(s)	662, 695
BalI	TGGCCA	3 cut(s)	852, 1236, 1856
BanII	GRGCYC	1 cut(s)	1607
BbsI	GAAGAC	2 cut(s)	94, 1970
Bbv12I	GWGCWC	2 cut(s)	950, 1607
BbvI	GCAGC	5 cut(s)	817, 913, 1478, 1600, 1875
BccI	CCATC	7 cut(s)	284, 546, 684, 709, 763, 1652, 1703
BceAI	ACGGC	3 cut(s)	516, 1234, 1394
BciT130I	CCWGG	4 cut(s)	1333, 1434, 1443, 1723
BclI	TGATCA	1 cut(s)	1747
BcnI	CCSGG	1 cut(s)	1907
BcoDI	GTCTC	3 cut(s)	410, 1722, 1754
BfaI	CTAG	2 cut(s)	186, 783
BfmI	CTRYAG	2 cut(s)	514, 1314
BglII	AGATCT	1 cut(s)	1096
BisI	GCNGC	6 cut(s)	831, 927, 1202, 1492, 1589, 1889
BlpI	GCTNAGC	1 cut(s)	447
BlsI	GCNGC	6 cut(s)	832, 928, 1203, 1493, 1590, 1890
Bme1390I	CCNGG	5 cut(s)	1333, 1434, 1443, 1723, 1907
Bme18I	GGWCC	2 cut(s)	671, 1803
BmgT120I	GGNCC	2 cut(s)	671, 1803
BmiI	GGNNCC	5 cut(s)	255, 1015, 1330, 1804, 1805
BmrFI	CCNGG	5 cut(s)	1333, 1434, 1443, 1723, 1907
BmsI	GCATC	4 cut(s)	361, 1786, 1875, 1900
BpiI	GAAGAC	2 cut(s)	94, 1970
BpmI	CTGGAG	3 cut(s)	1464, 1812, 1956
Bpu1102I	GCTNAGC	1 cut(s)	447
BpuEI	CTTGAG	1 cut(s)	99
BpuMI	CCSGG	1 cut(s)	1907
Bsa29I	ATCGAT	1 cut(s)	1164
BsaI	GGTCTC	1 cut(s)	1722
BsaJI	CCNNGG	7 cut(s)	136, 1061, 1127, 1441, 1500, 1721, 1722
BsaWI	WCCGGW	3 cut(s)	256, 454, 1633
Bsc4I	CCNNNNNNNGG	1 cut(s)	1852
Bse1I	ACTGG	3 cut(s)	1397, 1768, 1939
Bse3DI	GCAATG	2 cut(s)	936, 1461
BseAI	TCCGGA	1 cut(s)	1633
BseBI	CCWGG	4 cut(s)	1333, 1434, 1443, 1723
BseCI	ATCGAT	1 cut(s)	1164
BseDI	CCNNGG	7 cut(s)	136, 1061, 1127, 1441, 1500, 1721, 1722
BseGI	GGATG	6 cut(s)	292, 484, 557, 695, 1093, 1915
BseLI	CCNNNNNNNGG	1 cut(s)	1852
BseMI	GCAATG	2 cut(s)	936, 1461
BseMII	CTCAG	9 cut(s)	36, 56, 321, 438, 666, 734, 972, 1398, 1830
BseNI	ACTGG	3 cut(s)	1397, 1768, 1939
BseRI	GAGGAG	2 cut(s)	516, 1597
BseXI	GCAGC	5 cut(s)	817, 913, 1478, 1600, 1875
BseYI	CCCAGC	1 cut(s)	587
Bsh1236I	CGCG	3 cut(s)	413, 430, 880
BshFI	GGCC	5 cut(s)	852, 911, 1051, 1236, 1856
BshVI	ATCGAT	1 cut(s)	1164
BsiHKAI	GWGCWC	2 cut(s)	950, 1607
BsiSI	CCGG	4 cut(s)	257, 455, 1634, 1906
BslFI	GGGAC	4 cut(s)	802, 1412, 1739, 1816
BslI	CCNNNNNNNGG	1 cut(s)	1852
BsmAI	GTCTC	3 cut(s)	410, 1722, 1754
BsmFI	GGGAC	4 cut(s)	802, 1412, 1739, 1816
BsnI	GGCC	5 cut(s)	852, 911, 1051, 1236, 1856
Bso31I	GGTCTC	1 cut(s)	1722
Bsp1286I	GDGCHC	2 cut(s)	950, 1607
Bsp13I	TCCGGA	1 cut(s)	1633
Bsp143I	GATC	9 cut(s)	214, 625, 1039, 1096, 1165, 1630, 1747, 1810, 1826
Bsp1720I	GCTNAGC	1 cut(s)	447
Bsp19I	CCATGG	2 cut(s)	1061, 1127
BspACI	CCGC	5 cut(s)	413, 428, 878, 1201, 1799
BspANI	GGCC	5 cut(s)	852, 911, 1051, 1236, 1856
BspCNI	CTCAG	9 cut(s)	35, 55, 322, 439, 667, 733, 973, 1397, 1829
BspDI	ATCGAT	1 cut(s)	1164
BspEI	TCCGGA	1 cut(s)	1633
BspFNI	CGCG	3 cut(s)	413, 430, 880
BspLI	GGNNCC	5 cut(s)	255, 1015, 1330, 1804, 1805
BspMAI	CTGCAG	1 cut(s)	1318
BspPI	GGATC	4 cut(s)	209, 633, 1034, 1625
BspTNI	GGTCTC	1 cut(s)	1722
BsrDI	GCAATG	2 cut(s)	936, 1461
BsrI	ACTGG	3 cut(s)	1397, 1768, 1939
BssECI	CCNNGG	7 cut(s)	136, 1061, 1127, 1441, 1500, 1721, 1722
BssMI	GATC	9 cut(s)	214, 625, 1039, 1096, 1165, 1630, 1747, 1810, 1826
BssT1I	CCWWGG	3 cut(s)	136, 1061, 1127
Bst2UI	CCWGG	4 cut(s)	1333, 1434, 1443, 1723
Bst4CI	ACNGT	2 cut(s)	1688, 1902
Bst6I	CTCTTC	1 cut(s)	796
BstAPI	GCANNNNNTGC	3 cut(s)	131, 839, 1919
BstC8I	GCNNGC	8 cut(s)	54, 123, 854, 882, 886, 1318, 1338, 1854
BstDSI	CCRYGG	2 cut(s)	1061, 1127
BstF5I	GGATG	6 cut(s)	292, 484, 557, 695, 1093, 1915
BstFNI	CGCG	3 cut(s)	413, 430, 880
BstHHI	GCGC	4 cut(s)	413, 432, 1068, 1461
BstKTI	GATC	9 cut(s)	217, 628, 1042, 1099, 1168, 1633, 1750, 1813, 1829
BstMAI	GTCTC	3 cut(s)	410, 1722, 1754
BstMBI	GATC	9 cut(s)	214, 625, 1039, 1096, 1165, 1630, 1747, 1810, 1826
BstMWI	GCNNNNNNNGC	6 cut(s)	131, 839, 1099, 1337, 1491, 1919
BstNI	CCWGG	4 cut(s)	1333, 1434, 1443, 1723
BstNSI	RCATGY	4 cut(s)	56, 125, 821, 1864
BstSCI	CCNGG	5 cut(s)	1331, 1432, 1441, 1721, 1905
BstSFI	CTRYAG	2 cut(s)	514, 1314
BstUI	CGCG	3 cut(s)	413, 430, 880
BstV1I	GCAGC	5 cut(s)	817, 913, 1478, 1600, 1875
BstV2I	GAAGAC	2 cut(s)	94, 1970
BstX2I	RGATCY	5 cut(s)	214, 625, 1039, 1096, 1630
BstYI	RGATCY	5 cut(s)	214, 625, 1039, 1096, 1630
Bsu15I	ATCGAT	1 cut(s)	1164
BsuRI	GGCC	5 cut(s)	852, 911, 1051, 1236, 1856
BsuTUI	ATCGAT	1 cut(s)	1164
BtgI	CCRYGG	2 cut(s)	1061, 1127
BtgZI	GCGATG	1 cut(s)	1664
BtsCI	GGATG	6 cut(s)	292, 484, 557, 695, 1093, 1915
BtsIMutI	CAGTG	3 cut(s)	853, 1698, 1932
Cac8I	GCNNGC	8 cut(s)	54, 123, 854, 882, 886, 1318, 1338, 1854
CaiI	CAGNNNCTG	2 cut(s)	218, 1922
CfoI	GCGC	4 cut(s)	413, 432, 1068, 1461
Cfr13I	GGNCC	2 cut(s)	671, 1803
ClaI	ATCGAT	1 cut(s)	1164
Csp6I	GTAC	7 cut(s)	205, 522, 679, 871, 1843, 1898, 1903
CspCI	CAANNNNNGTGG	2 cut(s)	328, 363
CviQI	GTAC	7 cut(s)	205, 522, 679, 871, 1843, 1898, 1903
DpnI	GATC	9 cut(s)	216, 627, 1041, 1098, 1167, 1632, 1749, 1812, 1828
DpnII	GATC	9 cut(s)	214, 625, 1039, 1096, 1165, 1630, 1747, 1810, 1826
DraI	TTTAAA	1 cut(s)	1524
EaeI	YGGCCR	3 cut(s)	850, 1234, 1854
Eam1104I	CTCTTC	1 cut(s)	796
EarI	CTCTTC	1 cut(s)	796
Ecl136II	GAGCTC	1 cut(s)	1605
Eco130I	CCWWGG	3 cut(s)	136, 1061, 1127
Eco147I	AGGCCT	1 cut(s)	911
Eco24I	GRGCYC	1 cut(s)	1607
Eco31I	GGTCTC	1 cut(s)	1722
Eco32I	GATATC	2 cut(s)	192, 1596
Eco47I	GGWCC	2 cut(s)	671, 1803
Eco53kI	GAGCTC	1 cut(s)	1605
EcoICRI	GAGCTC	1 cut(s)	1605
EcoO109I	RGGNCCY	1 cut(s)	1803
EcoRI	GAATTC	2 cut(s)	157, 165
EcoRII	CCWGG	4 cut(s)	1331, 1432, 1441, 1721
EcoRV	GATATC	2 cut(s)	192, 1596
EcoT14I	CCWWGG	3 cut(s)	136, 1061, 1127
EcoT38I	GRGCYC	1 cut(s)	1607
ErhI	CCWWGG	3 cut(s)	136, 1061, 1127
FaqI	GGGAC	4 cut(s)	802, 1412, 1739, 1816
FauI	CCCGC	1 cut(s)	1792
FbaI	TGATCA	1 cut(s)	1747
Fnu4HI	GCNGC	6 cut(s)	831, 927, 1202, 1492, 1589, 1889
FokI	GGATG	6 cut(s)	299, 491, 564, 702, 1100, 1922
FriOI	GRGCYC	1 cut(s)	1607
Fsp4HI	GCNGC	6 cut(s)	831, 927, 1202, 1492, 1589, 1889
FspAI	RTGCGCAY	1 cut(s)	1460
FspBI	CTAG	2 cut(s)	186, 783
FspI	TGCGCA	1 cut(s)	1460
GlaI	GCGC	4 cut(s)	412, 431, 1067, 1460
GluI	GCNGC	6 cut(s)	831, 927, 1202, 1492, 1589, 1889
GsaI	CCCAGC	1 cut(s)	591
GsuI	CTGGAG	3 cut(s)	1464, 1812, 1956
HaeIII	GGCC	5 cut(s)	852, 911, 1051, 1236, 1856
HapII	CCGG	4 cut(s)	257, 455, 1634, 1906
HhaI	GCGC	4 cut(s)	413, 432, 1068, 1461
Hin6I	GCGC	4 cut(s)	411, 430, 1066, 1459
HinP1I	GCGC	4 cut(s)	411, 430, 1066, 1459
HindIII	AAGCTT	1 cut(s)	578
HpaII	CCGG	4 cut(s)	257, 455, 1634, 1906
HphI	GGTGA	4 cut(s)	271, 500, 527, 1625
Hpy166II	GTNNAC	3 cut(s)	568, 671, 871
Hpy188III	TCNNGA	8 cut(s)	154, 162, 218, 329, 705, 951, 1634, 1791
Hpy8I	GTNNAC	3 cut(s)	568, 671, 871
HpyCH4III	ACNGT	2 cut(s)	1688, 1902
HpyF10VI	GCNNNNNNNGC	6 cut(s)	131, 839, 1099, 1337, 1491, 1919
HspAI	GCGC	4 cut(s)	411, 430, 1066, 1459
KflI	GGGWCCC	1 cut(s)	1803
Kpn2I	TCCGGA	1 cut(s)	1633
Ksp22I	TGATCA	1 cut(s)	1747
Kzo9I	GATC	9 cut(s)	214, 625, 1039, 1096, 1165, 1630, 1747, 1810, 1826
LmnI	GCTCC	3 cut(s)	1107, 1328, 1610
Lsp1109I	GCAGC	5 cut(s)	817, 913, 1478, 1600, 1875
LweI	GCATC	4 cut(s)	361, 1786, 1875, 1900
MaeI	CTAG	2 cut(s)	186, 783
MaeIII	GTNAC	3 cut(s)	533, 1448, 1495
MalI	GATC	9 cut(s)	216, 627, 1041, 1098, 1167, 1632, 1749, 1812, 1828
MboI	GATC	9 cut(s)	214, 625, 1039, 1096, 1165, 1630, 1747, 1810, 1826
MboII	GAAGA	8 cut(s)	16, 94, 813, 981, 1014, 1347, 1644, 1975
MflI	RGATCY	5 cut(s)	214, 625, 1039, 1096, 1630
MhlI	GDGCHC	2 cut(s)	950, 1607
MlsI	TGGCCA	3 cut(s)	852, 1236, 1856
MluNI	TGGCCA	3 cut(s)	852, 1236, 1856
MlyI	GAGTC	2 cut(s)	355, 813
Mox20I	TGGCCA	3 cut(s)	852, 1236, 1856
MroI	TCCGGA	1 cut(s)	1633
MroXI	GAANNNNTTC	2 cut(s)	1367, 1651
MscI	TGGCCA	3 cut(s)	852, 1236, 1856
MseI	TTAA	3 cut(s)	90, 906, 1523
MslI	CAYNNNNRTG	1 cut(s)	57
Msp20I	TGGCCA	3 cut(s)	852, 1236, 1856
MspI	CCGG	4 cut(s)	257, 455, 1634, 1906
MspR9I	CCNGG	5 cut(s)	1333, 1434, 1443, 1723, 1907
MvaI	CCWGG	4 cut(s)	1333, 1434, 1443, 1723
MvnI	CGCG	3 cut(s)	413, 430, 880
MwoI	GCNNNNNNNGC	6 cut(s)	131, 839, 1099, 1337, 1491, 1919
NciI	CCSGG	1 cut(s)	1907
NcoI	CCATGG	2 cut(s)	1061, 1127
NdeII	GATC	9 cut(s)	214, 625, 1039, 1096, 1165, 1630, 1747, 1810, 1826
NlaIV	GGNNCC	5 cut(s)	255, 1015, 1330, 1804, 1805
NmeAIII	GCCGAG	1 cut(s)	422
NmuCI	GTSAC	1 cut(s)	533
NsbI	TGCGCA	1 cut(s)	1460
NspI	RCATGY	4 cut(s)	56, 125, 821, 1864
PaeI	GCATGC	2 cut(s)	56, 125
PasI	CCCWGGG	1 cut(s)	1722
PceI	AGGCCT	1 cut(s)	911
PciI	ACATGT	2 cut(s)	817, 1860
PdmI	GAANNNNTTC	2 cut(s)	1367, 1651
PfeI	GAWTC	8 cut(s)	38, 325, 593, 986, 1055, 1363, 1437, 1787
PflMI	CCANNNNNTGG	1 cut(s)	1852
PfoI	TCCNGGA	1 cut(s)	1432
PkrI	GCNGC	6 cut(s)	832, 928, 1203, 1493, 1590, 1890
PleI	GAGTC	2 cut(s)	355, 812
PpsI	GAGTC	2 cut(s)	355, 812
PpuMI	RGGWCCY	1 cut(s)	1803
PscI	ACATGT	2 cut(s)	817, 1860
Psp124BI	GAGCTC	1 cut(s)	1607
Psp5II	RGGWCCY	1 cut(s)	1803
Psp6I	CCWGG	4 cut(s)	1331, 1432, 1441, 1721
PspFI	CCCAGC	1 cut(s)	587
PspGI	CCWGG	4 cut(s)	1331, 1432, 1441, 1721
PspN4I	GGNNCC	5 cut(s)	255, 1015, 1330, 1804, 1805
PspPI	GGNCC	2 cut(s)	671, 1803
PspPPI	RGGWCCY	1 cut(s)	1803
PstI	CTGCAG	1 cut(s)	1318
PstNI	CAGNNNCTG	2 cut(s)	218, 1922
PsuI	RGATCY	5 cut(s)	214, 625, 1039, 1096, 1630
RsaI	GTAC	7 cut(s)	206, 523, 680, 872, 1844, 1899, 1904
RsaNI	GTAC	7 cut(s)	205, 522, 679, 871, 1843, 1898, 1903
RseI	CAYNNNNRTG	1 cut(s)	57
SacI	GAGCTC	1 cut(s)	1607
SaqAI	TTAA	3 cut(s)	90, 906, 1523
SatI	GCNGC	6 cut(s)	831, 927, 1202, 1492, 1589, 1889
Sau3AI	GATC	9 cut(s)	214, 625, 1039, 1096, 1165, 1630, 1747, 1810, 1826
Sau96I	GGNCC	2 cut(s)	671, 1803
SbfI	CCTGCAGG	1 cut(s)	1318
SchI	GAGTC	2 cut(s)	355, 813
ScrFI	CCNGG	5 cut(s)	1333, 1434, 1443, 1723, 1907
SdaI	CCTGCAGG	1 cut(s)	1318
SduI	GDGCHC	2 cut(s)	950, 1607
SfaNI	GCATC	4 cut(s)	361, 1786, 1875, 1900
SfcI	CTRYAG	2 cut(s)	514, 1314
SinI	GGWCC	2 cut(s)	671, 1803
SmiMI	CAYNNNNRTG	1 cut(s)	57
SmlI	CTYRAG	1 cut(s)	114
SmoI	CTYRAG	1 cut(s)	114
SphI	GCATGC	2 cut(s)	56, 125
Sse8387I	CCTGCAGG	1 cut(s)	1318
SseBI	AGGCCT	1 cut(s)	911
SsiI	CCGC	5 cut(s)	413, 428, 878, 1201, 1799
SspMI	CTAG	2 cut(s)	186, 783
SstI	GAGCTC	1 cut(s)	1607
StuI	AGGCCT	1 cut(s)	911
StyD4I	CCNGG	5 cut(s)	1331, 1432, 1441, 1721, 1905
StyI	CCWWGG	3 cut(s)	136, 1061, 1127
TaaI	ACNGT	2 cut(s)	1688, 1902
TaqI	TCGA	6 cut(s)	163, 596, 767, 1137, 1164, 1361
TatI	WGTACW	2 cut(s)	870, 1897
TauI	GCSGC	1 cut(s)	1204
TfiI	GAWTC	8 cut(s)	38, 325, 593, 986, 1055, 1363, 1437, 1787
Tru1I	TTAA	3 cut(s)	90, 906, 1523
Tru9I	TTAA	3 cut(s)	90, 906, 1523
TscAI	CASTG	3 cut(s)	853, 1698, 1939
TseFI	GTSAC	1 cut(s)	533
TseI	GCWGC	5 cut(s)	830, 926, 1491, 1588, 1888
Tsp45I	GTSAC	1 cut(s)	533
TspDTI	ATGAA	7 cut(s)	17, 997, 1019, 1347, 1444, 1614, 1956
TspRI	CASTG	3 cut(s)	853, 1698, 1939
Van91I	CCANNNNNTGG	1 cut(s)	1852
VpaK11BI	GGWCC	2 cut(s)	671, 1803
XapI	RAATTY	8 cut(s)	157, 165, 709, 778, 936, 1273, 1648, 1876
XceI	RCATGY	4 cut(s)	56, 125, 821, 1864
XmnI	GAANNNNTTC	2 cut(s)	1367, 1651
XspI	CTAG	2 cut(s)	186, 783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.