Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004027.1

Orthogroup ID

OG0011690

Physical Location & Seq

Genomic Coordinates Reverse (-)

38749 .. 41086

Gene Structure 2338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004027.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

atgaattctgtgagggagccaatgaagaacaacagcaacaactcagagaaaggtttggattctcagttctggcatgcctgtgctggtggcatggttcaaatgccacctattaactctaaggtcttctacttccctcaagggcatgcagagtatgcccaaggggatgtggatttcgggaattctcgaattccagcactcattctttctaggatatctgctattaggtacatggcagatcctgaaaccgatgaggtttatgcaaaaatgaggctggttccagtgagagagagtgattttgattttgaggatgatggggttgtggggaataacaatggagtagttgagaatcctgagaaacccacatcttttgctaagactttgactcaatctgatgctaacaatgggggagggttctctgtgcctcgcttctgcgcggagactatctttccgcgcttggattactcggctgagcctccggttcagaccattcttgcaaaggatgtgcatggtgagatttggaagtttaggcatatctatagaggtactcctcgccgtcaccttttgacaacgggatggagtaattttgtgaacaataaaaagcttgttgctggggattcgattgtttttttccgagcagaaaatggggatctttgtgtggggattaggagggctaaaagggggattggtggtggacctgagtacccttgtggatggaacactccatccggaaattcttgctctcagtatggtggttattctggcttttcaagggagaatggaaacaagtcaatggagaaaaattctagtgggactatgagaggaagagtcagggctgaacatgtcatagaagctgcaactcttgctgtcagtggccagccctttgaggttgtgtactatccacgtgcaagcacaccagagttttgtgttaaggcctcatctgtgagagctgcaatgcaaattcgctggtgctcgggaataaggttcaaaatgccttttgaaactgaggattcttctcggataagctggttcatgggaaccatatcttctgttcatcatgcagatccccgttggcctgattctccatggcgcatattacaggttgcatgggatgagccagatctgctccaaaatgtgagatgtgttagtccatggttggtcgaattggtatcaagcataccagctatcgatctctctccctactcgcctccaagaaagaagttgcggcttcaacagtatccagattattctcttattggccagctgccaatgccgtctgtttatggcaacttcctaaattccagcaacactttatgtcatctatcagacaacattcctgcaggcatacagggagccaggcaagctcattttggactatcttcatcgaatcttttcaacaaacggcactcaggtttaattccagttggctttcaacaacttggtcatgttgtccctcctggaatccctggaggtaacttcatgcgcattgctgaaaccaatgaggacagcccttgctgcgttactgagggtattccttaccacaatttaaaggataatgacgagataaagacacctcacatattcttgtttggacagctaattgtttcggggcagcagatgtcaaagagctcctctggtgatgatagttcatcagatccagagaaaacaggaaattcttctgatggctctggttctgcattacatcgcaacggttcagtggaaaattgctctgatggagggtctccctgggacaaagaccaccagaaaagtgaccacaacttggagactggtctttgcaaagtgtatgttgaatctggagatgcggggacccttgatctctcagtctttagatcataccaagaattgtaccgaaagctggccaacatgtttggcaaagaaggttcagagatgctgagtaatgtactgtaccgggatgcaacaggtgctgttagacacactggagatgaacccttcagtgagtttttgaagacagcaagaggactttatatggcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035198 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048829 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0061980 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

670

Amino Acids

73.95

Weight (kDa)

6.24

Isoelectric Point (pI)

45.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011690)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30080
fragaria_vesca	FvH4_7g19350 FvH4_7g19350
malus_domestica	MD01G1108100.v1.1 MD07G1174000.v1.1
prunus_persica	Prupe.2G213000_v2.0.a1 Prupe.2G213000_v2.0.a1
pyrus_communis	pycom01g13500 pycom07g16840
rosa_chinensis	RchiOBHm_Chr1g0363241
rosa_laevigata	RLG00000027580
rosa_multiflora	Rmu_sc0004027.1_g000014
rosa_roxburghii	Rroxscaffold_4G00293300
rosa_rugosa	Rorug01G0305700
rosa_samantha	Rh1AG314600 Rh1BG278100 Rh1CG294500 Rh1DG308900
rosa_wichuraiana	Rw1G027880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1481
AccB7I	CCANNNNNTGG	1 cut(s)	1777
AccII	CGCG	2 cut(s)	434, 451
AccIII	TCCGGA	1 cut(s)	725
AciI	CCGC	4 cut(s)	434, 449, 1222, 1820
AclWI	GGATC	4 cut(s)	230, 654, 1055, 1646
AcoI	YGGCCR	3 cut(s)	871, 1255, 1875
AcsI	RAATTY	8 cut(s)	4, 178, 186, 730, 799, 957, 1294, 1669
AcuI	CTGAAG	1 cut(s)	1954
AcvI	CACGTG	1 cut(s)	902
AfaI	GTAC	7 cut(s)	227, 544, 701, 893, 1865, 1920, 1925
AfiI	CCNNNNNNNGG	2 cut(s)	1777, 1873
AflIII	ACRYGT	2 cut(s)	838, 1881
AgsI	TTSAA	9 cut(s)	98, 768, 985, 998, 1229, 1393, 1430, 1808, 1984
AjnI	CCWGG	4 cut(s)	1352, 1453, 1462, 1742
AloI	GAACNNNNNNTCC	4 cut(s)	50, 82, 707, 739
Alw21I	GWGCWC	2 cut(s)	971, 1628
Alw26I	GTCTC	3 cut(s)	431, 1743, 1775
AlwI	GGATC	4 cut(s)	230, 654, 1055, 1646
AlwNI	CAGNNNCTG	2 cut(s)	239, 1943
Ama87I	CYCGRG	1 cut(s)	970
Aor13HI	TCCGGA	1 cut(s)	725
AoxI	GGCC	5 cut(s)	871, 930, 1070, 1255, 1875
ApeKI	GCWGC	5 cut(s)	851, 947, 1261, 1512, 1609
ApoI	RAATTY	8 cut(s)	4, 178, 186, 730, 799, 957, 1294, 1669
Asp700I	GAANNNNTTC	2 cut(s)	1388, 1672
AspLEI	GCGC	4 cut(s)	434, 453, 1089, 1482
AspS9I	GGNCC	2 cut(s)	692, 1824
AsuC2I	CCSGG	1 cut(s)	1928
AsuHPI	GGTGA	3 cut(s)	521, 548, 1646
AvaI	CYCGRG	1 cut(s)	970
AvaII	GGWCC	2 cut(s)	692, 1824
BaeI	ACNNNNGTAYC	2 cut(s)	683, 716
BalI	TGGCCA	3 cut(s)	873, 1257, 1877
BanII	GRGCYC	1 cut(s)	1628
BbrPI	CACGTG	1 cut(s)	902
BbsI	GAAGAC	2 cut(s)	115, 1991
Bbv12I	GWGCWC	2 cut(s)	971, 1628
BbvI	GCAGC	5 cut(s)	838, 934, 1248, 1499, 1621
BccI	CCATC	6 cut(s)	305, 567, 705, 730, 1673, 1724
BceAI	ACGGC	3 cut(s)	537, 1255, 1415
BciT130I	CCWGG	4 cut(s)	1354, 1455, 1464, 1744
BciVI	GTATCC	1 cut(s)	1245
BcnI	CCSGG	1 cut(s)	1928
BcoDI	GTCTC	3 cut(s)	431, 1743, 1775
BfaI	CTAG	2 cut(s)	207, 804
BfmI	CTRYAG	2 cut(s)	535, 1335
BfuI	GTATCC	1 cut(s)	1245
BglII	AGATCT	1 cut(s)	1117
BisI	GCNGC	6 cut(s)	852, 948, 1223, 1262, 1513, 1610
BlpI	GCTNAGC	1 cut(s)	468
BlsI	GCNGC	6 cut(s)	853, 949, 1224, 1263, 1514, 1611
Bme1390I	CCNGG	5 cut(s)	1354, 1455, 1464, 1744, 1928
Bme18I	GGWCC	2 cut(s)	692, 1824
BmeT110I	CYCGRG	1 cut(s)	970
BmgT120I	GGNCC	2 cut(s)	692, 1824
BmiI	GGNNCC	6 cut(s)	18, 276, 1036, 1351, 1825, 1826
BmrFI	CCNGG	5 cut(s)	1354, 1455, 1464, 1744, 1928
BmsI	GCATC	4 cut(s)	382, 1807, 1896, 1921
BpiI	GAAGAC	2 cut(s)	115, 1991
BpmI	CTGGAG	3 cut(s)	1485, 1833, 1977
Bpu1102I	GCTNAGC	1 cut(s)	468
BpuEI	CTTGAG	1 cut(s)	120
BpuMI	CCSGG	1 cut(s)	1928
Bsa29I	ATCGAT	1 cut(s)	1185
BsaAI	YACGTR	1 cut(s)	902
BsaI	GGTCTC	1 cut(s)	1743
BsaJI	CCNNGG	6 cut(s)	157, 1082, 1148, 1462, 1742, 1743
BsaWI	WCCGGW	2 cut(s)	475, 725
Bsc4I	CCNNNNNNNGG	2 cut(s)	1777, 1873
Bse1I	ACTGG	4 cut(s)	278, 1418, 1789, 1960
Bse3DI	GCAATG	2 cut(s)	957, 1482
BseAI	TCCGGA	1 cut(s)	725
BseBI	CCWGG	4 cut(s)	1354, 1455, 1464, 1744
BseCI	ATCGAT	1 cut(s)	1185
BseDI	CCNNGG	6 cut(s)	157, 1082, 1148, 1462, 1742, 1743
BseGI	GGATG	8 cut(s)	169, 313, 505, 578, 716, 722, 1114, 1936
BseLI	CCNNNNNNNGG	2 cut(s)	1777, 1873
BseMI	GCAATG	2 cut(s)	957, 1482
BseNI	ACTGG	4 cut(s)	278, 1418, 1789, 1960
BseRI	GAGGAG	2 cut(s)	537, 1618
BseXI	GCAGC	5 cut(s)	838, 934, 1248, 1499, 1621
BseYI	CCCAGC	1 cut(s)	608
Bsh1236I	CGCG	2 cut(s)	434, 451
BshFI	GGCC	5 cut(s)	873, 932, 1072, 1257, 1877
BshVI	ATCGAT	1 cut(s)	1185
BsiHKAI	GWGCWC	2 cut(s)	971, 1628
BsiHKCI	CYCGRG	1 cut(s)	970
BsiSI	CCGG	3 cut(s)	476, 726, 1927
BslFI	GGGAC	4 cut(s)	823, 1433, 1760, 1837
BslI	CCNNNNNNNGG	2 cut(s)	1777, 1873
BsmAI	GTCTC	3 cut(s)	431, 1743, 1775
BsmFI	GGGAC	4 cut(s)	823, 1433, 1760, 1837
BsnI	GGCC	5 cut(s)	873, 932, 1072, 1257, 1877
Bso31I	GGTCTC	1 cut(s)	1743
BsoBI	CYCGRG	1 cut(s)	970
Bsp1286I	GDGCHC	2 cut(s)	971, 1628
Bsp13I	TCCGGA	1 cut(s)	725
Bsp143I	GATC	8 cut(s)	235, 646, 1060, 1117, 1186, 1651, 1831, 1847
Bsp1720I	GCTNAGC	1 cut(s)	468
Bsp19I	CCATGG	2 cut(s)	1082, 1148
BspACI	CCGC	4 cut(s)	434, 449, 1222, 1820
BspANI	GGCC	5 cut(s)	873, 932, 1072, 1257, 1877
BspDI	ATCGAT	1 cut(s)	1185
BspEI	TCCGGA	1 cut(s)	725
BspFNI	CGCG	2 cut(s)	434, 451
BspLI	GGNNCC	6 cut(s)	18, 276, 1036, 1351, 1825, 1826
BspMAI	CTGCAG	1 cut(s)	1339
BspPI	GGATC	4 cut(s)	230, 654, 1055, 1646
BspTNI	GGTCTC	1 cut(s)	1743
BsrDI	GCAATG	2 cut(s)	957, 1482
BsrI	ACTGG	4 cut(s)	278, 1418, 1789, 1960
BssECI	CCNNGG	6 cut(s)	157, 1082, 1148, 1462, 1742, 1743
BssMI	GATC	8 cut(s)	235, 646, 1060, 1117, 1186, 1651, 1831, 1847
BssT1I	CCWWGG	3 cut(s)	157, 1082, 1148
Bst2UI	CCWGG	4 cut(s)	1354, 1455, 1464, 1744
Bst4CI	ACNGT	3 cut(s)	1233, 1709, 1923
Bst6I	CTCTTC	1 cut(s)	817
BstAPI	GCANNNNNTGC	3 cut(s)	152, 860, 1940
BstBAI	YACGTR	1 cut(s)	902
BstC8I	GCNNGC	8 cut(s)	75, 144, 875, 907, 1259, 1339, 1359, 1875
BstDSI	CCRYGG	2 cut(s)	1082, 1148
BstF5I	GGATG	8 cut(s)	169, 313, 505, 578, 716, 722, 1114, 1936
BstFNI	CGCG	2 cut(s)	434, 451
BstHHI	GCGC	4 cut(s)	434, 453, 1089, 1482
BstKTI	GATC	8 cut(s)	238, 649, 1063, 1120, 1189, 1654, 1834, 1850
BstMAI	GTCTC	3 cut(s)	431, 1743, 1775
BstMBI	GATC	8 cut(s)	235, 646, 1060, 1117, 1186, 1651, 1831, 1847
BstMWI	GCNNNNNNNGC	7 cut(s)	152, 860, 1120, 1267, 1358, 1512, 1940
BstNI	CCWGG	4 cut(s)	1354, 1455, 1464, 1744
BstNSI	RCATGY	4 cut(s)	77, 146, 842, 1885
BstSCI	CCNGG	5 cut(s)	1352, 1453, 1462, 1742, 1926
BstSFI	CTRYAG	2 cut(s)	535, 1335
BstUI	CGCG	2 cut(s)	434, 451
BstV1I	GCAGC	5 cut(s)	838, 934, 1248, 1499, 1621
BstV2I	GAAGAC	2 cut(s)	115, 1991
BstX2I	RGATCY	5 cut(s)	235, 646, 1060, 1117, 1651
BstYI	RGATCY	5 cut(s)	235, 646, 1060, 1117, 1651
Bsu15I	ATCGAT	1 cut(s)	1185
BsuI	GTATCC	1 cut(s)	1245
BsuRI	GGCC	5 cut(s)	873, 932, 1072, 1257, 1877
BsuTUI	ATCGAT	1 cut(s)	1185
BtgI	CCRYGG	2 cut(s)	1082, 1148
BtgZI	GCGATG	1 cut(s)	1685
BtsCI	GGATG	8 cut(s)	169, 313, 505, 578, 716, 722, 1114, 1936
BtsIMutI	CAGTG	5 cut(s)	285, 874, 1719, 1953, 1978
Cac8I	GCNNGC	8 cut(s)	75, 144, 875, 907, 1259, 1339, 1359, 1875
CaiI	CAGNNNCTG	2 cut(s)	239, 1943
CfoI	GCGC	4 cut(s)	434, 453, 1089, 1482
Cfr13I	GGNCC	2 cut(s)	692, 1824
ClaI	ATCGAT	1 cut(s)	1185
Csp6I	GTAC	7 cut(s)	226, 543, 700, 892, 1864, 1919, 1924
CspCI	CAANNNNNGTGG	2 cut(s)	349, 384
CviQI	GTAC	7 cut(s)	226, 543, 700, 892, 1864, 1919, 1924
DpnI	GATC	8 cut(s)	237, 648, 1062, 1119, 1188, 1653, 1833, 1849
DpnII	GATC	8 cut(s)	235, 646, 1060, 1117, 1186, 1651, 1831, 1847
DraI	TTTAAA	1 cut(s)	1545
EaeI	YGGCCR	3 cut(s)	871, 1255, 1875
Eam1104I	CTCTTC	1 cut(s)	817
EarI	CTCTTC	1 cut(s)	817
Ecl136II	GAGCTC	1 cut(s)	1626
Eco130I	CCWWGG	3 cut(s)	157, 1082, 1148
Eco147I	AGGCCT	1 cut(s)	932
Eco24I	GRGCYC	1 cut(s)	1628
Eco31I	GGTCTC	1 cut(s)	1743
Eco32I	GATATC	1 cut(s)	213
Eco47I	GGWCC	2 cut(s)	692, 1824
Eco53kI	GAGCTC	1 cut(s)	1626
Eco57I	CTGAAG	1 cut(s)	1954
Eco72I	CACGTG	1 cut(s)	902
Eco88I	CYCGRG	1 cut(s)	970
EcoICRI	GAGCTC	1 cut(s)	1626
EcoO109I	RGGNCCY	1 cut(s)	1824
EcoRI	GAATTC	3 cut(s)	4, 178, 186
EcoRII	CCWGG	4 cut(s)	1352, 1453, 1462, 1742
EcoRV	GATATC	1 cut(s)	213
EcoT14I	CCWWGG	3 cut(s)	157, 1082, 1148
EcoT38I	GRGCYC	1 cut(s)	1628
ErhI	CCWWGG	3 cut(s)	157, 1082, 1148
FaqI	GGGAC	4 cut(s)	823, 1433, 1760, 1837
FauI	CCCGC	1 cut(s)	1813
Fnu4HI	GCNGC	6 cut(s)	852, 948, 1223, 1262, 1513, 1610
FokI	GGATG	8 cut(s)	176, 320, 512, 585, 709, 723, 1121, 1943
FriOI	GRGCYC	1 cut(s)	1628
Fsp4HI	GCNGC	6 cut(s)	852, 948, 1223, 1262, 1513, 1610
FspAI	RTGCGCAY	1 cut(s)	1481
FspBI	CTAG	2 cut(s)	207, 804
FspI	TGCGCA	1 cut(s)	1481
GlaI	GCGC	4 cut(s)	433, 452, 1088, 1481
GluI	GCNGC	6 cut(s)	852, 948, 1223, 1262, 1513, 1610
GsaI	CCCAGC	1 cut(s)	612
GsuI	CTGGAG	3 cut(s)	1485, 1833, 1977
HaeIII	GGCC	5 cut(s)	873, 932, 1072, 1257, 1877
HapII	CCGG	3 cut(s)	476, 726, 1927
HhaI	GCGC	4 cut(s)	434, 453, 1089, 1482
Hin6I	GCGC	4 cut(s)	432, 451, 1087, 1480
HinP1I	GCGC	4 cut(s)	432, 451, 1087, 1480
HindIII	AAGCTT	1 cut(s)	599
HpaII	CCGG	3 cut(s)	476, 726, 1927
HphI	GGTGA	3 cut(s)	521, 548, 1646
Hpy166II	GTNNAC	3 cut(s)	589, 692, 892
Hpy188III	TCNNGA	9 cut(s)	175, 183, 239, 350, 726, 972, 1238, 1655, 1812
Hpy8I	GTNNAC	3 cut(s)	589, 692, 892
HpyAV	CCTTC	2 cut(s)	1889, 1978
HpyCH4III	ACNGT	3 cut(s)	1233, 1709, 1923
HpyCH4IV	ACGT	1 cut(s)	901
HpyF10VI	GCNNNNNNNGC	7 cut(s)	152, 860, 1120, 1267, 1358, 1512, 1940
HpySE526I	ACGT	1 cut(s)	901
HspAI	GCGC	4 cut(s)	432, 451, 1087, 1480
KflI	GGGWCCC	1 cut(s)	1824
Kpn2I	TCCGGA	1 cut(s)	725
Kzo9I	GATC	8 cut(s)	235, 646, 1060, 1117, 1186, 1651, 1831, 1847
LmnI	GCTCC	4 cut(s)	16, 1128, 1349, 1631
Lsp1109I	GCAGC	5 cut(s)	838, 934, 1248, 1499, 1621
LweI	GCATC	4 cut(s)	382, 1807, 1896, 1921
MaeI	CTAG	2 cut(s)	207, 804
MaeII	ACGT	1 cut(s)	901
MaeIII	GTNAC	4 cut(s)	554, 1469, 1516, 1766
MalI	GATC	8 cut(s)	237, 648, 1062, 1119, 1188, 1653, 1833, 1849
MboI	GATC	8 cut(s)	235, 646, 1060, 1117, 1186, 1651, 1831, 1847
MboII	GAAGA	8 cut(s)	37, 115, 834, 1002, 1035, 1368, 1665, 1996
MflI	RGATCY	5 cut(s)	235, 646, 1060, 1117, 1651
MhlI	GDGCHC	2 cut(s)	971, 1628
MlsI	TGGCCA	3 cut(s)	873, 1257, 1877
MluNI	TGGCCA	3 cut(s)	873, 1257, 1877
MlyI	GAGTC	2 cut(s)	376, 834
Mox20I	TGGCCA	3 cut(s)	873, 1257, 1877
MroI	TCCGGA	1 cut(s)	725
MroXI	GAANNNNTTC	2 cut(s)	1388, 1672
MscI	TGGCCA	3 cut(s)	873, 1257, 1877
MseI	TTAA	4 cut(s)	111, 927, 1412, 1544
MslI	CAYNNNNRTG	1 cut(s)	78
Msp20I	TGGCCA	3 cut(s)	873, 1257, 1877
MspA1I	CMGCKG	1 cut(s)	1261
MspI	CCGG	3 cut(s)	476, 726, 1927
MspR9I	CCNGG	5 cut(s)	1354, 1455, 1464, 1744, 1928
MvaI	CCWGG	4 cut(s)	1354, 1455, 1464, 1744
MvnI	CGCG	2 cut(s)	434, 451
MwoI	GCNNNNNNNGC	7 cut(s)	152, 860, 1120, 1267, 1358, 1512, 1940
NciI	CCSGG	1 cut(s)	1928
NcoI	CCATGG	2 cut(s)	1082, 1148
NdeII	GATC	8 cut(s)	235, 646, 1060, 1117, 1186, 1651, 1831, 1847
NlaIV	GGNNCC	6 cut(s)	18, 276, 1036, 1351, 1825, 1826
NmeAIII	GCCGAG	1 cut(s)	443
NmuCI	GTSAC	2 cut(s)	554, 1766
NsbI	TGCGCA	1 cut(s)	1481
NspI	RCATGY	4 cut(s)	77, 146, 842, 1885
PaeI	GCATGC	2 cut(s)	77, 146
PasI	CCCWGGG	1 cut(s)	1743
PceI	AGGCCT	1 cut(s)	932
PciI	ACATGT	2 cut(s)	838, 1881
PdmI	GAANNNNTTC	2 cut(s)	1388, 1672
PfeI	GAWTC	8 cut(s)	59, 346, 614, 1007, 1076, 1384, 1458, 1808
PflMI	CCANNNNNTGG	1 cut(s)	1777
PfoI	TCCNGGA	1 cut(s)	1453
PkrI	GCNGC	6 cut(s)	853, 949, 1224, 1263, 1514, 1611
PleI	GAGTC	2 cut(s)	376, 833
PmaCI	CACGTG	1 cut(s)	902
PmlI	CACGTG	1 cut(s)	902
PpsI	GAGTC	2 cut(s)	376, 833
Ppu21I	YACGTR	1 cut(s)	902
PpuMI	RGGWCCY	1 cut(s)	1824
PscI	ACATGT	2 cut(s)	838, 1881
Psp124BI	GAGCTC	1 cut(s)	1628
Psp5II	RGGWCCY	1 cut(s)	1824
Psp6I	CCWGG	4 cut(s)	1352, 1453, 1462, 1742
PspCI	CACGTG	1 cut(s)	902
PspFI	CCCAGC	1 cut(s)	608
PspGI	CCWGG	4 cut(s)	1352, 1453, 1462, 1742
PspN4I	GGNNCC	6 cut(s)	18, 276, 1036, 1351, 1825, 1826
PspPI	GGNCC	2 cut(s)	692, 1824
PspPPI	RGGWCCY	1 cut(s)	1824
PstI	CTGCAG	1 cut(s)	1339
PstNI	CAGNNNCTG	2 cut(s)	239, 1943
PsuI	RGATCY	5 cut(s)	235, 646, 1060, 1117, 1651
PvuII	CAGCTG	1 cut(s)	1261
RsaI	GTAC	7 cut(s)	227, 544, 701, 893, 1865, 1920, 1925
RsaNI	GTAC	7 cut(s)	226, 543, 700, 892, 1864, 1919, 1924
RseI	CAYNNNNRTG	1 cut(s)	78
SacI	GAGCTC	1 cut(s)	1628
SaqAI	TTAA	4 cut(s)	111, 927, 1412, 1544
SatI	GCNGC	6 cut(s)	852, 948, 1223, 1262, 1513, 1610
Sau3AI	GATC	8 cut(s)	235, 646, 1060, 1117, 1186, 1651, 1831, 1847
Sau96I	GGNCC	2 cut(s)	692, 1824
SbfI	CCTGCAGG	1 cut(s)	1339
SchI	GAGTC	2 cut(s)	376, 834
ScrFI	CCNGG	5 cut(s)	1354, 1455, 1464, 1744, 1928
SdaI	CCTGCAGG	1 cut(s)	1339
SduI	GDGCHC	2 cut(s)	971, 1628
SfaNI	GCATC	4 cut(s)	382, 1807, 1896, 1921
SfcI	CTRYAG	2 cut(s)	535, 1335
SinI	GGWCC	2 cut(s)	692, 1824
SmiMI	CAYNNNNRTG	1 cut(s)	78
SmlI	CTYRAG	1 cut(s)	135
SmoI	CTYRAG	1 cut(s)	135
SphI	GCATGC	2 cut(s)	77, 146
Sse8387I	CCTGCAGG	1 cut(s)	1339
SseBI	AGGCCT	1 cut(s)	932
SsiI	CCGC	4 cut(s)	434, 449, 1222, 1820
SspMI	CTAG	2 cut(s)	207, 804
SstI	GAGCTC	1 cut(s)	1628
StuI	AGGCCT	1 cut(s)	932
StyD4I	CCNGG	5 cut(s)	1352, 1453, 1462, 1742, 1926
StyI	CCWWGG	3 cut(s)	157, 1082, 1148
TaaI	ACNGT	3 cut(s)	1233, 1709, 1923
TaiI	ACGT	1 cut(s)	904
TaqI	TCGA	5 cut(s)	184, 617, 1158, 1185, 1382
TatI	WGTACW	2 cut(s)	891, 1918
TauI	GCSGC	1 cut(s)	1225
TfiI	GAWTC	8 cut(s)	59, 346, 614, 1007, 1076, 1384, 1458, 1808
Tru1I	TTAA	4 cut(s)	111, 927, 1412, 1544
Tru9I	TTAA	4 cut(s)	111, 927, 1412, 1544
TscAI	CASTG	5 cut(s)	285, 874, 1719, 1960, 1978
TseFI	GTSAC	2 cut(s)	554, 1766
TseI	GCWGC	5 cut(s)	851, 947, 1261, 1512, 1609
Tsp45I	GTSAC	2 cut(s)	554, 1766
TspDTI	ATGAA	8 cut(s)	17, 38, 1018, 1040, 1368, 1465, 1635, 1977
TspRI	CASTG	5 cut(s)	285, 874, 1719, 1960, 1978
Van91I	CCANNNNNTGG	1 cut(s)	1777
VpaK11BI	GGWCC	2 cut(s)	692, 1824
XapI	RAATTY	8 cut(s)	4, 178, 186, 730, 799, 957, 1294, 1669
XceI	RCATGY	4 cut(s)	77, 146, 842, 1885
XmnI	GAANNNNTTC	2 cut(s)	1388, 1672
XspI	CTAG	2 cut(s)	207, 804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.