Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0010046

Physical Location & Seq

Genomic Coordinates Forward (+)

24622138 .. 24624057

Gene Structure 1920 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g23830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGCGCCAATTCCTTTACTCCCCATCGCCATCGCCGGCAGCTAGTCCTCAGCCTCAACCCCACGTCAGCAGCCGCTTCCCCCACCCTCTCGCCGCCGCCTCCGCCACCACCGCCTTCTCTCTCCTCCTCTTCCTCCTAGTCTGCTTCCGAAAAAGCACCCGGAAGCGGACTGCCCCGGAATCTGACTCCAAGCCCCCCCACCGGTACTCCTACTCCGTCCTCCGCCGAGCGACCGACTCGTTCTCTTCGACGCGCCGACTCGGCCAAGGCGGCTCCGGGTCCGTGTTCTTCGGCACAATCCCACACACCCACCAAGACGTCGCCGTCAAGCTCATGGACTCCGGGTCGCTCCAGAGCGAGCGCGAGTTCCAGAACGAGCTCCTTTTAGCTTCCAAGCTCGATTCACCGCTCGTTGTCTCGGTGCTCGGATTCTCCTCCGACCCCAAACGGCGGCGTATGGTGCTGGTTTACGAGTTTATGAGGAACGGGAATTTGCAGGACGCGCTGCTGAAGAGGAAGTGCCCCGAATTGATGGAGTGGAGGAAAAGATTCTCAATTGCCGTTGACGTAGCGAAAGGGCTGAGATATCTTCATGGGTTGGACCCGCCGTTAATCCATGGCGATGTGAAGCCGAGTAATGTGCTGCTGGACGGCGGCTTCGCTGCCAAGGTCGCCGATTTCGGGCTGGCGAGGCTGAAATCGGAGAATCAGGTAGTGATTGAGATTGATGACGCGCCGAAGAAGGAGGAGCTGGAGAGCAATGGCGGTTGCGACTATGGGTCGGTGGTGGAGGAAACTGAGAGTGTGATGACAGCTGGGTTCGATGATTTAAACGTGGGTGTTGATCAGTCACCGGAGGATTTAGCCAAGGGTCCTGTTTCGGTTTCGCCGGAGACTTCGGTGACACAGCCGTCCCCGGTGTCACCAGAGGGGAATTTGGAGGAGGGTGGGAAGCAGAGGGTGAATAGGGATTGGTGGTGGAGGCAGGACAGTGGGGTGAAGGACTATGTGATGGAGTGGATTGGGAATGAGATTGGGGCTGATAGGCCGGTTGGAACTACTGCTTCCGGTTCAAGTAGCGAAATGGTTGGGAAATTTAAGAAGAAGAAGAAGAAGAATACGAAGAAGAGGTTGGAATGGTGGGTGTCAATGGACGAGGAAAAGAATGCGAAGAATTCTAACAAGGAGAGGAAAAGGCCTCCCAGGGAATGGTGGAAGGAAGAGTACTGCGATGAGCTTGCCAAGAAGAAGAAAAAGAAGGATAAGAAGCAATCAAAAGGAATGAGCTTTGATGAGAATGATGACAATTGGTGGGCACACGACGAGGAATTGTATGCGGAGAGTAAGAAGAAGATCAAGAAGAGGAGTAGGACCAAGAGTTGGGGGAGTGTGAGTAGTATTGATTGGTGGTTGGACGGAATGCGGCATAATGCTAGCCATGATTCCGGGGAAATTCCAATGAGTGGCGCCATGAGTAGTACTCCGAGCATGAGAGGCACAGTTTGTTATGTTGCCCCTGAATATGGTGACGGTGGTGATCCGTCTGAGACGTGGGATGTTTATAGTTTTGGAATTTTTTTATTAGTTCTTATCGCCGGAAGGCGCCCACTTGAGGTCACAAATTCGCCTCTATCCGAGTTCCAAAGGGCGAATTTGTTATCGTGGGCGCGCCATCTTGCACGTGCGGGGAAGCTTGTTGACCTTGTTGATAAGTCCATTCAGTTCTTGGATCAAGAACAAGCGATCCTTTGCATTACCGTGGCATTGGTTTGCTTGCAGAAAGTGCCTTCTCGCCGCCCTTCAATGAAGGAGGTTGTGGGGATGCTTACCGGTGAGTTGGAACCACCCAAATTACCGCGTGAATTATCCATTTCGGCTAAGTCACGCTTCCCATTTAAGTCTCATACAAATGTTCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

640

Amino Acids

71.66

Weight (kDa)

9.08

Isoelectric Point (pI)

52.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	82 - 235	2.1e-24	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	84 - 236	2e-26	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	494 - 606	2.1e-06	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010046)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25390 AT4G25390 AT5G51770
fragaria_vesca	FvH4_7g28580 FvH4_7g28580
malus_domestica	MD12G1112300.v1.1
prunus_persica	Prupe.2G285800_v2.0.a1
pyrus_communis	pycom01g20260 pycom07g23830
rosa_chinensis	RchiOBHm_Chr1g0375991
rosa_laevigata	RLG00000026637
rosa_multiflora	Rmu_co8192330.1_g000001 Rmu_ssc0000116.1_g000012
rosa_roxburghii	Rroxscaffold_4G00282440
rosa_rugosa	Rorug01G0393500 Rorug02G0306800
rosa_samantha	Rh1AG404800 Rh1BG368300 Rh1CG381200 Rh1DG398200
rosa_wichuraiana	Rw1G035900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	323, 910
AatII	GACGTC	1 cut(s)	321
AccB1I	GGYRCC	2 cut(s)	1466, 1602
AccB7I	CCANNNNNTGG	3 cut(s)	1209, 1380, 1463
AccBSI	CCGCTC	1 cut(s)	409
AccII	CGCG	6 cut(s)	253, 363, 503, 734, 1669, 1858
AclWI	GGATC	3 cut(s)	1532, 1737, 1738
AcoI	YGGCCR	1 cut(s)	262
AcsI	RAATTY	8 cut(s)	490, 934, 1094, 1174, 1452, 1572, 1621, 1651
AcuI	CTGAAG	1 cut(s)	530
AcvI	CACGTG	1 cut(s)	1682
AcyI	GRCGYC	3 cut(s)	318, 1467, 1603
AfaI	GTAC	3 cut(s)	206, 1226, 1480
AfiI	CCNNNNNNNGG	9 cut(s)	165, 201, 450, 681, 1209, 1380, 1463, 1523, 1612
AgeI	ACCGGT	2 cut(s)	201, 1829
AgsI	TTSAA	2 cut(s)	1074, 1803
AhdI	GACNNNNNGTC	2 cut(s)	343, 778
AjiI	CACGTC	2 cut(s)	64, 1551
AjnI	CCWGG	1 cut(s)	1202
AjuI	GAANNNNNNNTTGG	2 cut(s)	1115, 1147
AloI	GAACNNNNNNTCC	2 cut(s)	1728, 1760
Alw21I	GWGCWC	2 cut(s)	381, 426
Alw26I	GTCTC	4 cut(s)	421, 887, 1541, 1905
AlwI	GGATC	3 cut(s)	1532, 1737, 1738
AoxI	GGCC	3 cut(s)	262, 1046, 1196
ApeKI	GCWGC	5 cut(s)	38, 69, 505, 643, 662
ApoI	RAATTY	8 cut(s)	490, 934, 1094, 1174, 1452, 1572, 1621, 1651
ArsI	GACNNNNNNTTYG	2 cut(s)	641, 673
AscI	GGCGCGCC	1 cut(s)	1667
AsiGI	ACCGGT	2 cut(s)	201, 1829
Asp700I	GAANNNNTTC	1 cut(s)	548
AspLEI	GCGC	9 cut(s)	6, 255, 363, 505, 736, 1469, 1605, 1669, 1671
AspS9I	GGNCC	4 cut(s)	279, 601, 872, 1371
AsuC2I	CCSGG	6 cut(s)	160, 176, 277, 343, 917, 1447
AsuHPI	GGTGA	9 cut(s)	396, 843, 913, 915, 973, 1009, 1538, 1547, 1844
AsuNHI	GCTAGC	1 cut(s)	1433
AvaII	GGWCC	4 cut(s)	279, 601, 872, 1371
BaeGI	GKGCMC	2 cut(s)	524, 1318
BanI	GGYRCC	2 cut(s)	1466, 1602
BanII	GRGCYC	1 cut(s)	381
BarI	GAAGNNNNNNTAC	2 cut(s)	1208, 1240
BbrPI	CACGTG	1 cut(s)	1682
Bbv12I	GWGCWC	2 cut(s)	381, 426
BbvCI	CCTCAGC	1 cut(s)	48
BbvI	GCAGC	5 cut(s)	50, 81, 492, 630, 649
BccI	CCATC	5 cut(s)	31, 37, 526, 1006, 1680
BceAI	ACGGC	6 cut(s)	308, 464, 545, 592, 667, 895
BcgI	CGANNNNNNTGC	4 cut(s)	622, 656, 1220, 1254
BciT130I	CCWGG	1 cut(s)	1204
BclI	TGATCA	1 cut(s)	844
BcnI	CCSGG	6 cut(s)	160, 176, 277, 343, 917, 1447
BcoDI	GTCTC	4 cut(s)	421, 887, 1541, 1905
BfaI	CTAG	3 cut(s)	42, 137, 1434
BfoI	RGCGCY	2 cut(s)	1470, 1606
BglI	GCCNNNNNGGC	2 cut(s)	261, 270
BmcAI	AGTACT	2 cut(s)	1226, 1480
Bme1390I	CCNGG	7 cut(s)	160, 176, 277, 343, 917, 1204, 1447
Bme18I	GGWCC	4 cut(s)	279, 601, 872, 1371
BmeRI	GACNNNNNGTC	2 cut(s)	343, 778
BmgBI	CACGTC	2 cut(s)	64, 1551
BmgT120I	GGNCC	4 cut(s)	279, 601, 872, 1371
BmiI	GGNNCC	7 cut(s)	274, 280, 603, 873, 1468, 1604, 1842
BmrFI	CCNGG	7 cut(s)	160, 176, 277, 343, 917, 1204, 1447
BmsI	GCATC	1 cut(s)	1812
BmtI	GCTAGC	1 cut(s)	1437
BplI	GAGNNNNNCTC	2 cut(s)	1465, 1497
BpmI	CTGGAG	2 cut(s)	335, 773
Bpu10I	CCTNAGC	1 cut(s)	48
BpuEI	CTTGAG	1 cut(s)	1631
BpuMI	CCSGG	6 cut(s)	160, 176, 277, 343, 917, 1447
BsaAI	YACGTR	1 cut(s)	1682
BsaHI	GRCGYC	3 cut(s)	318, 1467, 1603
BsaWI	WCCGGW	4 cut(s)	201, 853, 1067, 1829
BsaXI	ACNNNNNCTCC	6 cut(s)	191, 197, 221, 227, 1378, 1408
Bsc4I	CCNNNNNNNGG	9 cut(s)	165, 201, 450, 681, 1209, 1380, 1463, 1523, 1612
Bse118I	RCCGGY	4 cut(s)	34, 201, 1048, 1829
Bse3DI	GCAATG	1 cut(s)	766
BseBI	CCWGG	1 cut(s)	1204
BseGI	GGATG	2 cut(s)	1561, 1827
BseLI	CCNNNNNNNGG	9 cut(s)	165, 201, 450, 681, 1209, 1380, 1463, 1523, 1612
BseMI	GCAATG	1 cut(s)	766
BseMII	CTCAG	4 cut(s)	62, 572, 789, 1536
BsePI	GCGCGC	1 cut(s)	1667
BseRI	GAGGAG	6 cut(s)	113, 116, 424, 761, 956, 1378
BseSI	GKGCMC	2 cut(s)	524, 1318
BseXI	GCAGC	5 cut(s)	50, 81, 492, 630, 649
BseYI	CCCAGC	1 cut(s)	815
Bsh1236I	CGCG	6 cut(s)	253, 363, 503, 734, 1669, 1858
Bsh1285I	CGRYCG	1 cut(s)	234
BshFI	GGCC	3 cut(s)	264, 1048, 1198
BshNI	GGYRCC	2 cut(s)	1466, 1602
BshTI	ACCGGT	2 cut(s)	201, 1829
BsiEI	CGRYCG	1 cut(s)	234
BsiHKAI	GWGCWC	2 cut(s)	381, 426
BslFI	GGGAC	1 cut(s)	898
BslI	CCNNNNNNNGG	9 cut(s)	165, 201, 450, 681, 1209, 1380, 1463, 1523, 1612
BsmAI	GTCTC	4 cut(s)	421, 887, 1541, 1905
BsmBI	CGTCTC	1 cut(s)	1541
BsmFI	GGGAC	1 cut(s)	898
BsmI	GAATGC	2 cut(s)	1171, 1425
BsnI	GGCC	3 cut(s)	264, 1048, 1198
Bsp1286I	GDGCHC	4 cut(s)	381, 426, 524, 1318
Bsp143I	GATC	5 cut(s)	844, 1353, 1537, 1729, 1743
Bsp19I	CCATGG	1 cut(s)	616
BspANI	GGCC	3 cut(s)	264, 1048, 1198
BspCNI	CTCAG	4 cut(s)	61, 573, 790, 1537
BspFNI	CGCG	6 cut(s)	253, 363, 503, 734, 1669, 1858
BspLI	GGNNCC	7 cut(s)	274, 280, 603, 873, 1468, 1604, 1842
BspOI	GCTAGC	1 cut(s)	1437
BspPI	GGATC	3 cut(s)	1532, 1737, 1738
BspT107I	GGYRCC	2 cut(s)	1466, 1602
BsrBI	CCGCTC	1 cut(s)	409
BsrDI	GCAATG	1 cut(s)	766
BsrFI	RCCGGY	4 cut(s)	34, 201, 1048, 1829
BssAI	RCCGGY	4 cut(s)	34, 201, 1048, 1829
BssHII	GCGCGC	1 cut(s)	1667
BssMI	GATC	5 cut(s)	844, 1353, 1537, 1729, 1743
BssNI	GRCGYC	3 cut(s)	318, 1467, 1603
BssT1I	CCWWGG	4 cut(s)	265, 616, 666, 867
Bst2UI	CCWGG	1 cut(s)	1204
Bst4CI	ACNGT	4 cut(s)	992, 1501, 1532, 1759
Bst6I	CTCTTC	6 cut(s)	134, 250, 506, 1121, 1215, 1355
BstACI	GRCGYC	3 cut(s)	318, 1467, 1603
BstAPI	GCANNNNNTGC	1 cut(s)	1783
BstBAI	YACGTR	1 cut(s)	1682
BstC8I	GCNNGC	7 cut(s)	36, 359, 687, 1239, 1435, 1669, 1775
BstDEI	CTNAG	5 cut(s)	48, 581, 798, 1545, 1878
BstDSI	CCRYGG	2 cut(s)	616, 1758
BstF5I	GGATG	2 cut(s)	1561, 1827
BstFNI	CGCG	6 cut(s)	253, 363, 503, 734, 1669, 1858
BstH2I	RGCGCY	2 cut(s)	1470, 1606
BstHHI	GCGC	9 cut(s)	6, 255, 363, 505, 736, 1469, 1605, 1669, 1671
BstKTI	GATC	5 cut(s)	847, 1356, 1540, 1732, 1746
BstMAI	GTCTC	4 cut(s)	421, 887, 1541, 1905
BstMBI	GATC	5 cut(s)	844, 1353, 1537, 1729, 1743
BstMCI	CGRYCG	1 cut(s)	234
BstNI	CCWGG	1 cut(s)	1204
BstSCI	CCNGG	7 cut(s)	158, 174, 275, 341, 915, 1202, 1445
BstSLI	GKGCMC	2 cut(s)	524, 1318
BstUI	CGCG	6 cut(s)	253, 363, 503, 734, 1669, 1858
BstV1I	GCAGC	5 cut(s)	50, 81, 492, 630, 649
BsuRI	GGCC	3 cut(s)	264, 1048, 1198
BtgI	CCRYGG	2 cut(s)	616, 1758
BtgZI	GCGATG	4 cut(s)	9, 15, 636, 1245
BtrI	CACGTC	2 cut(s)	64, 1551
BtsCI	GGATG	2 cut(s)	1561, 1827
BtsIMutI	CAGTG	1 cut(s)	997
Cac8I	GCNNGC	7 cut(s)	36, 359, 687, 1239, 1435, 1669, 1775
CfoI	GCGC	9 cut(s)	6, 255, 363, 505, 736, 1469, 1605, 1669, 1671
Cfr10I	RCCGGY	4 cut(s)	34, 201, 1048, 1829
Cfr13I	GGNCC	4 cut(s)	279, 601, 872, 1371
CseI	GACGC	3 cut(s)	259, 509, 740
Csp6I	GTAC	3 cut(s)	205, 1225, 1479
CspAI	ACCGGT	2 cut(s)	201, 1829
CviAII	CATG	6 cut(s)	334, 593, 617, 1439, 1471, 1489
CviQI	GTAC	3 cut(s)	205, 1225, 1479
DdeI	CTNAG	5 cut(s)	48, 581, 798, 1545, 1878
DinI	GGCGCC	2 cut(s)	1468, 1604
DpnI	GATC	5 cut(s)	846, 1355, 1539, 1731, 1745
DpnII	GATC	5 cut(s)	844, 1353, 1537, 1729, 1743
DraI	TTTAAA	1 cut(s)	831
DrdI	GACNNNNNNGTC	2 cut(s)	323, 910
DriI	GACNNNNNGTC	2 cut(s)	343, 778
DseDI	GACNNNNNNGTC	2 cut(s)	323, 910
EaeI	YGGCCR	1 cut(s)	262
Eam1104I	CTCTTC	6 cut(s)	134, 250, 506, 1121, 1215, 1355
Eam1105I	GACNNNNNGTC	2 cut(s)	343, 778
EarI	CTCTTC	6 cut(s)	134, 250, 506, 1121, 1215, 1355
EciI	GGCGGA	2 cut(s)	91, 212
Ecl136II	GAGCTC	1 cut(s)	379
Eco130I	CCWWGG	4 cut(s)	265, 616, 666, 867
Eco147I	AGGCCT	1 cut(s)	1198
Eco24I	GRGCYC	1 cut(s)	381
Eco32I	GATATC	1 cut(s)	587
Eco47I	GGWCC	4 cut(s)	279, 601, 872, 1371
Eco53kI	GAGCTC	1 cut(s)	379
Eco57I	CTGAAG	1 cut(s)	530
Eco72I	CACGTG	1 cut(s)	1682
EcoICRI	GAGCTC	1 cut(s)	379
EcoO109I	RGGNCCY	1 cut(s)	872
EcoRI	GAATTC	1 cut(s)	1174
EcoRII	CCWGG	1 cut(s)	1202
EcoRV	GATATC	1 cut(s)	587
EcoT14I	CCWWGG	4 cut(s)	265, 616, 666, 867
EcoT38I	GRGCYC	1 cut(s)	381
EgeI	GGCGCC	2 cut(s)	1468, 1604
EheI	GGCGCC	2 cut(s)	1468, 1604
ErhI	CCWWGG	4 cut(s)	265, 616, 666, 867
Esp3I	CGTCTC	1 cut(s)	1541
FaeI	CATG	6 cut(s)	337, 596, 620, 1442, 1474, 1492
FalI	AAGNNNNNCTT	4 cut(s)	1731, 1763, 1871, 1903
FaqI	GGGAC	1 cut(s)	898
FatI	CATG	6 cut(s)	333, 592, 616, 1438, 1470, 1488
FauI	CCCGC	2 cut(s)	612, 1678
FbaI	TGATCA	1 cut(s)	844
FokI	GGATG	2 cut(s)	1568, 1834
FriOI	GRGCYC	1 cut(s)	381
FspBI	CTAG	3 cut(s)	42, 137, 1434
GlaI	GCGC	9 cut(s)	5, 254, 362, 504, 735, 1468, 1604, 1668, 1670
GsaI	CCCAGC	1 cut(s)	819
GsuI	CTGGAG	2 cut(s)	335, 773
HaeII	RGCGCY	2 cut(s)	1470, 1606
HaeIII	GGCC	3 cut(s)	264, 1048, 1198
HgaI	GACGC	3 cut(s)	259, 509, 740
HhaI	GCGC	9 cut(s)	6, 255, 363, 505, 736, 1469, 1605, 1669, 1671
Hin1I	GRCGYC	3 cut(s)	318, 1467, 1603
Hin1II	CATG	6 cut(s)	337, 596, 620, 1442, 1474, 1492
Hin6I	GCGC	9 cut(s)	4, 253, 361, 503, 734, 1467, 1603, 1667, 1669
HinP1I	GCGC	9 cut(s)	4, 253, 361, 503, 734, 1467, 1603, 1667, 1669
HincII	GTYRAC	2 cut(s)	565, 1699
HindII	GTYRAC	2 cut(s)	565, 1699
HindIII	AAGCTT	1 cut(s)	1691
HphI	GGTGA	9 cut(s)	396, 843, 913, 915, 973, 1009, 1538, 1547, 1844
Hpy166II	GTNNAC	3 cut(s)	469, 565, 1699
Hpy188I	TCNGA	8 cut(s)	149, 184, 428, 439, 703, 1485, 1546, 1636
Hpy188III	TCNNGA	4 cut(s)	352, 370, 1357, 1733
Hpy8I	GTNNAC	3 cut(s)	469, 565, 1699
Hpy99I	CGWCG	3 cut(s)	253, 323, 1325
HpyAV	CCTTC	9 cut(s)	124, 736, 994, 1210, 1252, 1593, 1797, 1801, 1809
HpyCH4III	ACNGT	4 cut(s)	992, 1501, 1532, 1759
HpyCH4IV	ACGT	6 cut(s)	63, 318, 567, 834, 1550, 1681
HpyCH4V	TGCA	4 cut(s)	496, 1679, 1752, 1777
HpyF3I	CTNAG	5 cut(s)	48, 581, 798, 1545, 1878
HpySE526I	ACGT	6 cut(s)	63, 318, 567, 834, 1550, 1681
Hsp92I	GRCGYC	3 cut(s)	318, 1467, 1603
Hsp92II	CATG	6 cut(s)	337, 596, 620, 1442, 1474, 1492
HspAI	GCGC	9 cut(s)	4, 253, 361, 503, 734, 1467, 1603, 1667, 1669
KasI	GGCGCC	2 cut(s)	1466, 1602
KroI	GCCGGC	1 cut(s)	34
KroNI	GCCGGC	1 cut(s)	36
Ksp22I	TGATCA	1 cut(s)	844
Kzo9I	GATC	5 cut(s)	844, 1353, 1537, 1729, 1743
LmnI	GCTCC	4 cut(s)	278, 354, 384, 748
Lsp1109I	GCAGC	5 cut(s)	50, 81, 492, 630, 649
LweI	GCATC	1 cut(s)	1812
MaeI	CTAG	3 cut(s)	42, 137, 1434
MaeII	ACGT	6 cut(s)	63, 318, 567, 834, 1550, 1681
MaeIII	GTNAC	6 cut(s)	849, 901, 921, 1526, 1615, 1881
MalI	GATC	5 cut(s)	846, 1355, 1539, 1731, 1745
MbiI	CCGCTC	1 cut(s)	409
MboI	GATC	5 cut(s)	844, 1353, 1537, 1729, 1743
MfeI	CAATTG	2 cut(s)	555, 1306
MhlI	GDGCHC	4 cut(s)	381, 426, 524, 1318
Mly113I	GGCGCC	2 cut(s)	1467, 1603
MlyI	GAGTC	4 cut(s)	179, 230, 252, 332
MmeI	TCCRAC	6 cut(s)	462, 579, 1033, 1113, 1392, 1818
MroNI	GCCGGC	1 cut(s)	34
MroXI	GAANNNNTTC	1 cut(s)	548
MseI	TTAA	4 cut(s)	611, 830, 1098, 1896
MslI	CAYNNNNRTG	3 cut(s)	621, 1757, 1908
MspA1I	CMGCKG	1 cut(s)	815
MspR9I	CCNGG	7 cut(s)	160, 176, 277, 343, 917, 1204, 1447
MunI	CAATTG	2 cut(s)	555, 1306
Mva1269I	GAATGC	2 cut(s)	1171, 1425
MvaI	CCWGG	1 cut(s)	1204
MvnI	CGCG	6 cut(s)	253, 363, 503, 734, 1669, 1858
NaeI	GCCGGC	1 cut(s)	36
NarI	GGCGCC	2 cut(s)	1467, 1603
NciI	CCSGG	6 cut(s)	160, 176, 277, 343, 917, 1447
NcoI	CCATGG	1 cut(s)	616
NdeII	GATC	5 cut(s)	844, 1353, 1537, 1729, 1743
NgoMIV	GCCGGC	1 cut(s)	34
NheI	GCTAGC	1 cut(s)	1433
NlaIII	CATG	6 cut(s)	337, 596, 620, 1442, 1474, 1492
NlaIV	GGNNCC	7 cut(s)	274, 280, 603, 873, 1468, 1604, 1842
NmeAIII	GCCGAG	3 cut(s)	240, 251, 657
NmuCI	GTSAC	6 cut(s)	849, 901, 921, 1526, 1615, 1881
PalAI	GGCGCGCC	1 cut(s)	1667
PasI	CCCWGGG	1 cut(s)	1203
PauI	GCGCGC	1 cut(s)	1667
PceI	AGGCCT	1 cut(s)	1198
PcsI	WCGNNNNNNNCGW	1 cut(s)	245
PctI	GAATGC	2 cut(s)	1171, 1425
PdiI	GCCGGC	1 cut(s)	36
PdmI	GAANNNNTTC	1 cut(s)	548
PfeI	GAWTC	6 cut(s)	179, 401, 429, 549, 706, 1442
PflMI	CCANNNNNTGG	3 cut(s)	1209, 1380, 1463
PinAI	ACCGGT	2 cut(s)	201, 1829
PleI	GAGTC	4 cut(s)	179, 230, 252, 332
PluTI	GGCGCC	2 cut(s)	1470, 1606
PmaCI	CACGTG	1 cut(s)	1682
PmlI	CACGTG	1 cut(s)	1682
PpsI	GAGTC	4 cut(s)	179, 230, 252, 332
Ppu21I	YACGTR	1 cut(s)	1682
PpuMI	RGGWCCY	1 cut(s)	872
Psp124BI	GAGCTC	1 cut(s)	381
Psp5II	RGGWCCY	1 cut(s)	872
Psp6I	CCWGG	1 cut(s)	1202
PspCI	CACGTG	1 cut(s)	1682
PspFI	CCCAGC	1 cut(s)	815
PspGI	CCWGG	1 cut(s)	1202
PspN4I	GGNNCC	7 cut(s)	274, 280, 603, 873, 1468, 1604, 1842
PspPI	GGNCC	4 cut(s)	279, 601, 872, 1371
PspPPI	RGGWCCY	1 cut(s)	872
PteI	GCGCGC	1 cut(s)	1667
PvuII	CAGCTG	1 cut(s)	815
RsaI	GTAC	3 cut(s)	206, 1226, 1480
RsaNI	GTAC	3 cut(s)	205, 1225, 1479
RseI	CAYNNNNRTG	3 cut(s)	621, 1757, 1908
SacI	GAGCTC	1 cut(s)	381
SaqAI	TTAA	4 cut(s)	611, 830, 1098, 1896
Sau3AI	GATC	5 cut(s)	844, 1353, 1537, 1729, 1743
Sau96I	GGNCC	4 cut(s)	279, 601, 872, 1371
ScaI	AGTACT	2 cut(s)	1226, 1480
SchI	GAGTC	4 cut(s)	179, 230, 252, 332
ScrFI	CCNGG	7 cut(s)	160, 176, 277, 343, 917, 1204, 1447
SduI	GDGCHC	4 cut(s)	381, 426, 524, 1318
SfaNI	GCATC	1 cut(s)	1812
SfoI	GGCGCC	2 cut(s)	1468, 1604
SgsI	GGCGCGCC	1 cut(s)	1667
SinI	GGWCC	4 cut(s)	279, 601, 872, 1371
SmiMI	CAYNNNNRTG	3 cut(s)	621, 1757, 1908
SmlI	CTYRAG	1 cut(s)	1610
SmoI	CTYRAG	1 cut(s)	1610
SseBI	AGGCCT	1 cut(s)	1198
SspDI	GGCGCC	2 cut(s)	1466, 1602
SspMI	CTAG	3 cut(s)	42, 137, 1434
SstI	GAGCTC	1 cut(s)	381
StuI	AGGCCT	1 cut(s)	1198
StyD4I	CCNGG	7 cut(s)	158, 174, 275, 341, 915, 1202, 1445
StyI	CCWWGG	4 cut(s)	265, 616, 666, 867
TaaI	ACNGT	4 cut(s)	992, 1501, 1532, 1759
TaiI	ACGT	6 cut(s)	66, 321, 570, 837, 1553, 1684
TaqI	TCGA	3 cut(s)	248, 399, 822
TaqII	GACCGA	1 cut(s)	248
TatI	WGTACW	2 cut(s)	1224, 1478
TauI	GCSGC	8 cut(s)	75, 95, 98, 273, 454, 657, 1426, 1797
TfiI	GAWTC	6 cut(s)	179, 401, 429, 549, 706, 1442
Tru1I	TTAA	4 cut(s)	611, 830, 1098, 1896
Tru9I	TTAA	4 cut(s)	611, 830, 1098, 1896
TscAI	CASTG	1 cut(s)	997
TseFI	GTSAC	6 cut(s)	849, 901, 921, 1526, 1615, 1881
TseI	GCWGC	5 cut(s)	38, 69, 505, 643, 662
Tsp45I	GTSAC	6 cut(s)	849, 901, 921, 1526, 1615, 1881
TspDTI	ATGAA	2 cut(s)	581, 1820
TspGWI	ACGGA	4 cut(s)	205, 271, 1431, 1530
TspRI	CASTG	1 cut(s)	997
Van91I	CCANNNNNTGG	3 cut(s)	1209, 1380, 1463
VpaK11BI	GGWCC	4 cut(s)	279, 601, 872, 1371
XapI	RAATTY	8 cut(s)	490, 934, 1094, 1174, 1452, 1572, 1621, 1651
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1723
XmnI	GAANNNNTTC	1 cut(s)	548
XspI	CTAG	3 cut(s)	42, 137, 1434
ZraI	GACGTC	1 cut(s)	319
ZrmI	AGTACT	2 cut(s)	1226, 1480

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.