Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0010046

Physical Location & Seq

Genomic Coordinates Forward (+)

65115860 .. 65120797

Gene Structure 4938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG381200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGCGCCCAATCAACCAATCCCCGTCACCCTCATCCCCTCAGCCACCGCAGCCCCACCGCACCCACCTCCTCGTCCCACTCGCCGGCGCCGCCACCACCACCGCCTTCTCCCTCCTCCTCTTCCTCCTCGTCTGCTTCCGCAAAATCACCCGCAAGCGCACCGCCCCTGAAGCCGACTCCAAGCCCCCCCACCGCTTCTCCTACTCCCTCCTCCGACGCGCCACCGACTCCTTCTCCCCCACGCGCCGCCTCGGCCAGGGCGGCTCCGGCTCCGTATTCTTCGGAACGCTCCCCCACACCCGGCAGGACGTCGCCGTCAAGCTCATGGACTCCGGGTCCCTCCAGGGCGAGCGCGAGTTCCAGAACGAGCTCTTCTTCGCCTCCATGCTCGACTCCCGACACGTCATCTCGGTCCTCGGATTCTCCTCCGATCGGAAACGGCGCCGTATGCTGCTGGTTTACGAGTTCATGAGCAACGGGAACCTGCAGGACGCGCTGCTGCACCGGAAGTGCCCGGAGCTGATGGAGTGGAAGAAGAGGTTTTCGATTATGGTGGATGTAGCTAAAGGCCTTTGCTACGTTCATGGATTGGACCCGCCGGTTGTTCACGGTGACGTCAAGCCGAGTAATGTGCTGCTGGACGGCAGCTTCAATGTGAAGATTGCCGATTTCGGGCTGGCGAGGCTAAAGTCGGAAATTCAGGTTGTGATTGGGGAGGATGTGAAGAAGGGTGAGGGTGTGGTGGTGAAGAAGGAGGAGCTTGAAGACTGTGGCTCTGTGGTTGAGGAAACCGAGAGTGTTAGTGTTGCCACTGCAGGGTTTGAGGATTCGAATTTGGGAGTTGATCAGTCGCCGGAGAGTTTAGTGATCAAGCTGCCTGTTTCACCAGAGACTCCGGTGACGGCGTCACCGGAGGAGAATGTGGATAAGGATGGGGGAGAGAAGCTGAGTGTGAATAAGGATTGGTGGATGAGACAGGAGAATGGGAGTGGTGTGAAGGACTATGTGATGGAGTGGATTGGGAATGAGATTGGGAATGAGAGGCCCACGGCTGCTTCGAGTAGTGAAATGGTGGGGAGGTCGGAGAAGAAGAAGAAGAAGAAGAATAAGAAGAGGAATAGGAAGAGATTGGATTGGTGGATGTCGATGGAGGAGAGTGGGAAAGTTTCGAGCAAGGAGAAGAGGAGGCCTGCCAGGGAATGGTGGAAGGAGGAGTATTGTGAGGAGCTGACAAAGAAGAAAAAGAAGAAGGATAAGAAGCAGAGTAAAGGAATGAGCTTTGATGAGAATGAGAGTGACTGGTGGCCACACGACGATGAATTGTATGCTGAGACCAGGAAGAAGAAGAAGAGTAGGAGCAGGAGTTGGGGGAGTATGAGTAGTATTGATTGGTGGCTGGATGGAATTCGCCGTAATGCTAGTAATAATTCTGCTAGTGGGGAAATTCCTAAAAGCTGTGGCATGAGTAGTACGCCAAGTATGAGAGGAACTGTATGTTATGTTGCCCCCGAATATGGTTTTGGTGGTGATCCTTCAGAATTATGTGATGTTTATAGTTTTGGGGTGTTGTTGTTGGTTGTTATAGCCGGAAGGCGCCCACTTCAGGTAACAAATTCGCCTCTGTCAGAGTTCCAGAGAGCGAATTTGTTGTCTTGGGCACGCCATCTTGCTCGTGCTGGGAAGCTTATTGATCTTGTTGATAAGTCCATTCAGGGTCTGGAGCAAGAACAAGCTCTCCTTTGCATCACTGTGGCATTAGTTTGTTTGCAAAAGATACCTGCTCGCCGGCCTTCAATGAAAGAGGTTGTGGGGATGCTGACTGGTGAGTTAGAACCACCCAAATTACCACCGGAGTTAACCACGTCAGCTCAGTCACGGTTCTCACACAAGTCCCATAGAAAGGTCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

636

Amino Acids

71.43

Weight (kDa)

9.28

Isoelectric Point (pI)

58.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	81 - 229	7.9e-25	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	81 - 231	3.1e-25	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010046)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25390 AT4G25390 AT5G51770
fragaria_vesca	FvH4_7g28580 FvH4_7g28580
malus_domestica	MD12G1112300.v1.1
prunus_persica	Prupe.2G285800_v2.0.a1
pyrus_communis	pycom01g20260 pycom07g23830
rosa_chinensis	RchiOBHm_Chr1g0375991
rosa_laevigata	RLG00000026637
rosa_multiflora	Rmu_co8192330.1_g000001 Rmu_ssc0000116.1_g000012
rosa_roxburghii	Rroxscaffold_4G00282440
rosa_rugosa	Rorug01G0393500 Rorug02G0306800
rosa_samantha	Rh1AG404800 Rh1BG368300 Rh1CG381200 Rh1DG398200
rosa_wichuraiana	Rw1G035900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	314
AatII	GACGTC	2 cut(s)	312, 618
Acc36I	ACCTGC	2 cut(s)	492, 1786
AccB1I	GGYRCC	3 cut(s)	86, 441, 1593
AccB7I	CCANNNNNTGG	1 cut(s)	1200
AccII	CGCG	4 cut(s)	219, 244, 354, 494
AclWI	GGATC	1 cut(s)	1523
AcoI	YGGCCR	2 cut(s)	253, 1304
AcsI	RAATTY	6 cut(s)	696, 832, 1404, 1443, 1612, 1642
AcuI	CTGAAG	3 cut(s)	189, 1518, 1586
AcyI	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1594
AfaI	GTAC	1 cut(s)	1471
AflIII	ACRYGT	1 cut(s)	400
AgsI	TTSAA	3 cut(s)	652, 764, 1794
AhdI	GACNNNNNGTC	1 cut(s)	334
AjiI	CACGTC	2 cut(s)	403, 1863
AjnI	CCWGG	4 cut(s)	255, 342, 1193, 1334
AjuI	GAANNNNNNNTTGG	2 cut(s)	1503, 1535
AloI	GAACNNNNNNTCC	2 cut(s)	1719, 1751
Alw21I	GWGCWC	1 cut(s)	372
Alw26I	GTCTC	3 cut(s)	884, 967, 1325
AlwI	GGATC	1 cut(s)	1523
AlwNI	CAGNNNCTG	1 cut(s)	1717
AoxI	GGCC	6 cut(s)	253, 568, 1043, 1187, 1304, 1787
ApeKI	GCWGC	8 cut(s)	49, 451, 496, 499, 634, 645, 874, 1052
ApoI	RAATTY	6 cut(s)	696, 832, 1404, 1443, 1612, 1642
ArsI	GACNNNNNNTTYG	2 cut(s)	1634, 1666
AspLEI	GCGC	9 cut(s)	6, 89, 159, 221, 246, 354, 444, 496, 1596
AspS9I	GGNCC	5 cut(s)	336, 412, 592, 1044, 1903
AsuC2I	CCSGG	3 cut(s)	301, 334, 515
AsuII	TTCGAA	1 cut(s)	830
AvaII	GGWCC	4 cut(s)	336, 412, 592, 1903
BaeGI	GKGCMC	2 cut(s)	515, 1660
BalI	TGGCCA	1 cut(s)	1306
BanI	GGYRCC	3 cut(s)	86, 441, 1593
BanII	GRGCYC	1 cut(s)	372
BauI	CACGAG	1 cut(s)	1671
BbsI	GAAGAC	1 cut(s)	771
Bbv12I	GWGCWC	1 cut(s)	372
BbvCI	CCTCAGC	1 cut(s)	39
BbvI	GCAGC	8 cut(s)	61, 438, 483, 486, 621, 657, 861, 1039
BccI	CCATC	6 cut(s)	517, 926, 1003, 1141, 1394, 1671
BceAI	ACGGC	7 cut(s)	299, 429, 455, 658, 918, 1065, 1395
BcgI	CGANNNNNNTGC	2 cut(s)	613, 647
BciT130I	CCWGG	4 cut(s)	257, 344, 1195, 1336
BclI	TGATCA	2 cut(s)	844, 867
BcnI	CCSGG	3 cut(s)	301, 334, 515
BcoDI	GTCTC	3 cut(s)	884, 967, 1325
BfaI	CTAG	2 cut(s)	1419, 1434
BfmI	CTRYAG	2 cut(s)	485, 813
BfoI	RGCGCY	3 cut(s)	90, 445, 1597
BfuAI	ACCTGC	2 cut(s)	492, 1786
BglI	GCCNNNNNGGC	2 cut(s)	252, 261
Bme1390I	CCNGG	7 cut(s)	257, 301, 334, 344, 515, 1195, 1336
Bme18I	GGWCC	4 cut(s)	336, 412, 592, 1903
BmeRI	GACNNNNNGTC	1 cut(s)	334
BmgBI	CACGTC	2 cut(s)	403, 1863
BmgT120I	GGNCC	5 cut(s)	336, 412, 592, 1044, 1903
BmiI	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1595
BmrFI	CCNGG	7 cut(s)	257, 301, 334, 344, 515, 1195, 1336
BmsI	GCATC	2 cut(s)	1752, 1803
BpiI	GAAGAC	1 cut(s)	771
BpmI	CTGGAG	2 cut(s)	326, 1739
Bpu10I	CCTNAGC	1 cut(s)	39
Bpu14I	TTCGAA	1 cut(s)	830
BpuMI	CCSGG	3 cut(s)	301, 334, 515
BsaHI	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1594
BsaI	GGTCTC	1 cut(s)	1325
BsaJI	CCNNGG	6 cut(s)	250, 256, 343, 415, 1047, 1194
BsaWI	WCCGGW	5 cut(s)	504, 895, 910, 1849, 1905
Bse118I	RCCGGY	3 cut(s)	83, 598, 1785
Bse1I	ACTGG	2 cut(s)	1304, 1825
BseBI	CCWGG	4 cut(s)	257, 344, 1195, 1336
BseDI	CCNNGG	6 cut(s)	250, 256, 343, 415, 1047, 1194
BseGI	GGATG	8 cut(s)	32, 562, 724, 937, 975, 1146, 1405, 1818
BseMII	CTCAG	4 cut(s)	53, 938, 1320, 1883
BseNI	ACTGG	2 cut(s)	1304, 1825
BseSI	GKGCMC	2 cut(s)	515, 1660
BseXI	GCAGC	8 cut(s)	61, 438, 483, 486, 621, 657, 861, 1039
BseYI	CCCAGC	1 cut(s)	1676
BsgI	GTGCAG	1 cut(s)	485
Bsh1236I	CGCG	4 cut(s)	219, 244, 354, 494
Bsh1285I	CGRYCG	1 cut(s)	433
BshFI	GGCC	6 cut(s)	255, 570, 1045, 1189, 1306, 1789
BshNI	GGYRCC	3 cut(s)	86, 441, 1593
BsiEI	CGRYCG	1 cut(s)	433
BsiHKAI	GWGCWC	1 cut(s)	372
BslFI	GGGAC	3 cut(s)	59, 322, 1876
BsmAI	GTCTC	3 cut(s)	884, 967, 1325
BsmFI	GGGAC	3 cut(s)	59, 322, 1876
BsnI	GGCC	6 cut(s)	255, 570, 1045, 1189, 1306, 1789
Bso31I	GGTCTC	1 cut(s)	1325
Bsp119I	TTCGAA	1 cut(s)	830
Bsp1286I	GDGCHC	3 cut(s)	372, 515, 1660
Bsp143I	GATC	5 cut(s)	430, 844, 867, 1528, 1690
BspANI	GGCC	6 cut(s)	255, 570, 1045, 1189, 1306, 1789
BspCNI	CTCAG	4 cut(s)	52, 939, 1321, 1882
BspFNI	CGCG	4 cut(s)	219, 244, 354, 494
BspHI	TCATGA	1 cut(s)	468
BspLI	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1595
BspMAI	CTGCAG	2 cut(s)	489, 817
BspMI	ACCTGC	2 cut(s)	492, 1786
BspPI	GGATC	1 cut(s)	1523
BspQI	GCTCTTC	1 cut(s)	377
BspT104I	TTCGAA	1 cut(s)	830
BspT107I	GGYRCC	3 cut(s)	86, 441, 1593
BspTNI	GGTCTC	1 cut(s)	1325
BsrFI	RCCGGY	3 cut(s)	83, 598, 1785
BsrI	ACTGG	2 cut(s)	1304, 1825
BssAI	RCCGGY	3 cut(s)	83, 598, 1785
BssECI	CCNNGG	6 cut(s)	250, 256, 343, 415, 1047, 1194
BssMI	GATC	5 cut(s)	430, 844, 867, 1528, 1690
BssNI	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1594
BssSI	CACGAG	1 cut(s)	1671
Bst2BI	CACGAG	1 cut(s)	1671
Bst2UI	CCWGG	4 cut(s)	257, 344, 1195, 1336
Bst4CI	ACNGT	5 cut(s)	611, 770, 1492, 1750, 1878
Bst6I	CTCTTC	7 cut(s)	125, 377, 530, 1106, 1118, 1175, 1343
BstACI	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1594
BstBI	TTCGAA	1 cut(s)	830
BstC8I	GCNNGC	8 cut(s)	85, 155, 350, 678, 1191, 1660, 1783, 1787
BstDEI	CTNAG	4 cut(s)	39, 947, 1329, 1869
BstDSI	CCRYGG	1 cut(s)	1047
BstENI	CCTNNNNNAGG	1 cut(s)	254
BstF5I	GGATG	8 cut(s)	32, 562, 724, 937, 975, 1146, 1405, 1818
BstFNI	CGCG	4 cut(s)	219, 244, 354, 494
BstH2I	RGCGCY	3 cut(s)	90, 445, 1597
BstHHI	GCGC	9 cut(s)	6, 89, 159, 221, 246, 354, 444, 496, 1596
BstKTI	GATC	5 cut(s)	433, 847, 870, 1531, 1693
BstMAI	GTCTC	3 cut(s)	884, 967, 1325
BstMBI	GATC	5 cut(s)	430, 844, 867, 1528, 1690
BstMCI	CGRYCG	1 cut(s)	433
BstMWI	GCNNNNNNNGC	9 cut(s)	49, 89, 170, 252, 261, 267, 448, 493, 682
BstNI	CCWGG	4 cut(s)	257, 344, 1195, 1336
BstSCI	CCNGG	7 cut(s)	255, 299, 332, 342, 513, 1193, 1334
BstSFI	CTRYAG	2 cut(s)	485, 813
BstSLI	GKGCMC	2 cut(s)	515, 1660
BstUI	CGCG	4 cut(s)	219, 244, 354, 494
BstV1I	GCAGC	8 cut(s)	61, 438, 483, 486, 621, 657, 861, 1039
BstV2I	GAAGAC	1 cut(s)	771
BsuRI	GGCC	6 cut(s)	255, 570, 1045, 1189, 1306, 1789
BtgI	CCRYGG	1 cut(s)	1047
BtrI	CACGTC	2 cut(s)	403, 1863
BtsCI	GGATG	8 cut(s)	32, 562, 724, 937, 975, 1146, 1405, 1818
BtsI	GCAGTG	1 cut(s)	810
BtsIMutI	CAGTG	2 cut(s)	810, 1746
BveI	ACCTGC	2 cut(s)	492, 1786
Cac8I	GCNNGC	8 cut(s)	85, 155, 350, 678, 1191, 1660, 1783, 1787
CaiI	CAGNNNCTG	1 cut(s)	1717
CciI	TCATGA	1 cut(s)	468
CfoI	GCGC	9 cut(s)	6, 89, 159, 221, 246, 354, 444, 496, 1596
Cfr10I	RCCGGY	3 cut(s)	83, 598, 1785
Cfr13I	GGNCC	5 cut(s)	336, 412, 592, 1044, 1903
CseI	GACGC	3 cut(s)	225, 500, 894
Csp6I	GTAC	1 cut(s)	1470
CviAII	CATG	5 cut(s)	325, 385, 469, 584, 1462
CviQI	GTAC	1 cut(s)	1470
DdeI	CTNAG	4 cut(s)	39, 947, 1329, 1869
DinI	GGCGCC	3 cut(s)	88, 443, 1595
DpnI	GATC	5 cut(s)	432, 846, 869, 1530, 1692
DpnII	GATC	5 cut(s)	430, 844, 867, 1528, 1690
DrdI	GACNNNNNNGTC	1 cut(s)	314
DriI	GACNNNNNGTC	1 cut(s)	334
DseDI	GACNNNNNNGTC	1 cut(s)	314
EaeI	YGGCCR	2 cut(s)	253, 1304
Eam1104I	CTCTTC	7 cut(s)	125, 377, 530, 1106, 1118, 1175, 1343
Eam1105I	GACNNNNNGTC	1 cut(s)	334
EarI	CTCTTC	7 cut(s)	125, 377, 530, 1106, 1118, 1175, 1343
Ecl136II	GAGCTC	1 cut(s)	370
Eco147I	AGGCCT	2 cut(s)	570, 1189
Eco24I	GRGCYC	1 cut(s)	372
Eco31I	GGTCTC	1 cut(s)	1325
Eco47I	GGWCC	4 cut(s)	336, 412, 592, 1903
Eco53kI	GAGCTC	1 cut(s)	370
Eco57I	CTGAAG	3 cut(s)	189, 1518, 1586
EcoICRI	GAGCTC	1 cut(s)	370
EcoNI	CCTNNNNNAGG	1 cut(s)	254
EcoO109I	RGGNCCY	1 cut(s)	336
EcoRI	GAATTC	1 cut(s)	1404
EcoRII	CCWGG	4 cut(s)	255, 342, 1193, 1334
EcoT38I	GRGCYC	1 cut(s)	372
EgeI	GGCGCC	3 cut(s)	88, 443, 1595
EheI	GGCGCC	3 cut(s)	88, 443, 1595
FaeI	CATG	5 cut(s)	328, 388, 472, 587, 1465
FalI	AAGNNNNNCTT	2 cut(s)	1722, 1754
FaqI	GGGAC	3 cut(s)	59, 322, 1876
FatI	CATG	5 cut(s)	324, 384, 468, 583, 1461
FauI	CCCGC	2 cut(s)	158, 603
FbaI	TGATCA	2 cut(s)	844, 867
FokI	GGATG	8 cut(s)	19, 569, 731, 944, 982, 1153, 1412, 1825
FriOI	GRGCYC	1 cut(s)	372
FspBI	CTAG	2 cut(s)	1419, 1434
GlaI	GCGC	9 cut(s)	5, 88, 158, 220, 245, 353, 443, 495, 1595
GsaI	CCCAGC	1 cut(s)	1680
GsuI	CTGGAG	2 cut(s)	326, 1739
HaeII	RGCGCY	3 cut(s)	90, 445, 1597
HaeIII	GGCC	6 cut(s)	255, 570, 1045, 1189, 1306, 1789
HgaI	GACGC	3 cut(s)	225, 500, 894
HhaI	GCGC	9 cut(s)	6, 89, 159, 221, 246, 354, 444, 496, 1596
Hin1I	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1594
Hin1II	CATG	5 cut(s)	328, 388, 472, 587, 1465
Hin6I	GCGC	9 cut(s)	4, 87, 157, 219, 244, 352, 442, 494, 1594
HinP1I	GCGC	9 cut(s)	4, 87, 157, 219, 244, 352, 442, 494, 1594
HincII	GTYRAC	1 cut(s)	1857
HindII	GTYRAC	1 cut(s)	1857
HindIII	AAGCTT	1 cut(s)	1682
HinfI	GANTC	7 cut(s)	176, 227, 329, 392, 420, 827, 892
HpaI	GTTAAC	1 cut(s)	1857
Hpy166II	GTNNAC	3 cut(s)	460, 607, 1857
Hpy188I	TCNGA	9 cut(s)	215, 284, 419, 430, 435, 694, 1084, 1537, 1627
Hpy188III	TCNNGA	5 cut(s)	361, 396, 469, 1633, 1718
Hpy8I	GTNNAC	3 cut(s)	460, 607, 1857
Hpy99I	CGWCG	3 cut(s)	219, 314, 1316
HpyCH4III	ACNGT	5 cut(s)	611, 770, 1492, 1750, 1878
HpyCH4IV	ACGT	5 cut(s)	309, 402, 579, 615, 1862
HpyCH4V	TGCA	5 cut(s)	487, 502, 815, 1743, 1768
HpyF10VI	GCNNNNNNNGC	9 cut(s)	49, 89, 170, 252, 261, 267, 448, 493, 682
HpyF3I	CTNAG	4 cut(s)	39, 947, 1329, 1869
HpySE526I	ACGT	5 cut(s)	309, 402, 579, 615, 1862
Hsp92I	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1594
Hsp92II	CATG	5 cut(s)	328, 388, 472, 587, 1465
HspAI	GCGC	9 cut(s)	4, 87, 157, 219, 244, 352, 442, 494, 1594
KasI	GGCGCC	3 cut(s)	86, 441, 1593
KflI	GGGWCCC	1 cut(s)	336
KroI	GCCGGC	2 cut(s)	83, 1785
KroNI	GCCGGC	2 cut(s)	85, 1787
Ksp22I	TGATCA	2 cut(s)	844, 867
KspAI	GTTAAC	1 cut(s)	1857
Kzo9I	GATC	5 cut(s)	430, 844, 867, 1528, 1690
LguI	GCTCTTC	1 cut(s)	377
LmnI	GCTCC	8 cut(s)	269, 275, 294, 517, 757, 1225, 1356, 1720
Lsp1109I	GCAGC	8 cut(s)	61, 438, 483, 486, 621, 657, 861, 1039
LweI	GCATC	2 cut(s)	1752, 1803
MaeI	CTAG	2 cut(s)	1419, 1434
MaeII	ACGT	5 cut(s)	309, 402, 579, 615, 1862
MaeIII	GTNAC	7 cut(s)	24, 611, 898, 906, 1295, 1606, 1872
MalI	GATC	5 cut(s)	432, 846, 869, 1530, 1692
MboI	GATC	5 cut(s)	430, 844, 867, 1528, 1690
MhlI	GDGCHC	3 cut(s)	372, 515, 1660
MlsI	TGGCCA	1 cut(s)	1306
MluNI	TGGCCA	1 cut(s)	1306
Mly113I	GGCGCC	3 cut(s)	87, 442, 1594
MlyI	GAGTC	5 cut(s)	170, 221, 323, 386, 886
MmeI	TCCRAC	3 cut(s)	238, 672, 1062
Mox20I	TGGCCA	1 cut(s)	1306
MreI	CGCCGGCG	1 cut(s)	83
MroNI	GCCGGC	2 cut(s)	83, 1785
MscI	TGGCCA	1 cut(s)	1306
MseI	TTAA	1 cut(s)	1856
MslI	CAYNNNNRTG	2 cut(s)	1314, 1748
Msp20I	TGGCCA	1 cut(s)	1306
MspR9I	CCNGG	7 cut(s)	257, 301, 334, 344, 515, 1195, 1336
MvaI	CCWGG	4 cut(s)	257, 344, 1195, 1336
MvnI	CGCG	4 cut(s)	219, 244, 354, 494
MwoI	GCNNNNNNNGC	9 cut(s)	49, 89, 170, 252, 261, 267, 448, 493, 682
NaeI	GCCGGC	2 cut(s)	85, 1787
NarI	GGCGCC	3 cut(s)	87, 442, 1594
NciI	CCSGG	3 cut(s)	301, 334, 515
NdeII	GATC	5 cut(s)	430, 844, 867, 1528, 1690
NgoMIV	GCCGGC	2 cut(s)	83, 1785
NlaIII	CATG	5 cut(s)	328, 388, 472, 587, 1465
NlaIV	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1595
NmeAIII	GCCGAG	2 cut(s)	231, 648
NmuCI	GTSAC	6 cut(s)	24, 611, 898, 906, 1295, 1872
NspV	TTCGAA	1 cut(s)	830
PagI	TCATGA	1 cut(s)	468
PceI	AGGCCT	2 cut(s)	570, 1189
PciSI	GCTCTTC	1 cut(s)	377
PcsI	WCGNNNNNNNCGW	1 cut(s)	1055
PdiI	GCCGGC	2 cut(s)	85, 1787
PfeI	GAWTC	2 cut(s)	420, 827
PflFI	GACNNNGTC	1 cut(s)	904
PflMI	CCANNNNNTGG	1 cut(s)	1200
Ple19I	CGATCG	1 cut(s)	433
PleI	GAGTC	5 cut(s)	170, 221, 323, 386, 886
PluTI	GGCGCC	3 cut(s)	90, 445, 1597
PpsI	GAGTC	5 cut(s)	170, 221, 323, 386, 886
PpuMI	RGGWCCY	1 cut(s)	336
Psp124BI	GAGCTC	1 cut(s)	372
Psp5II	RGGWCCY	1 cut(s)	336
Psp6I	CCWGG	4 cut(s)	255, 342, 1193, 1334
PspFI	CCCAGC	1 cut(s)	1676
PspGI	CCWGG	4 cut(s)	255, 342, 1193, 1334
PspN4I	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1595
PspPI	GGNCC	5 cut(s)	336, 412, 592, 1044, 1903
PspPPI	RGGWCCY	1 cut(s)	336
PstI	CTGCAG	2 cut(s)	489, 817
PstNI	CAGNNNCTG	1 cut(s)	1717
PsyI	GACNNNGTC	1 cut(s)	904
PvuI	CGATCG	1 cut(s)	433
RsaI	GTAC	1 cut(s)	1471
RsaNI	GTAC	1 cut(s)	1470
RseI	CAYNNNNRTG	2 cut(s)	1314, 1748
SacI	GAGCTC	1 cut(s)	372
SapI	GCTCTTC	1 cut(s)	377
SaqAI	TTAA	1 cut(s)	1856
Sau3AI	GATC	5 cut(s)	430, 844, 867, 1528, 1690
Sau96I	GGNCC	5 cut(s)	336, 412, 592, 1044, 1903
SbfI	CCTGCAGG	1 cut(s)	489
SchI	GAGTC	5 cut(s)	170, 221, 323, 386, 886
ScrFI	CCNGG	7 cut(s)	257, 301, 334, 344, 515, 1195, 1336
SdaI	CCTGCAGG	1 cut(s)	489
SduI	GDGCHC	3 cut(s)	372, 515, 1660
SfaNI	GCATC	2 cut(s)	1752, 1803
SfcI	CTRYAG	2 cut(s)	485, 813
SfoI	GGCGCC	3 cut(s)	88, 443, 1595
SfuI	TTCGAA	1 cut(s)	830
SgrAI	CRCCGGYG	1 cut(s)	83
SinI	GGWCC	4 cut(s)	336, 412, 592, 1903
SmiMI	CAYNNNNRTG	2 cut(s)	1314, 1748
Sse8387I	CCTGCAGG	1 cut(s)	489
SseBI	AGGCCT	2 cut(s)	570, 1189
SspDI	GGCGCC	3 cut(s)	86, 441, 1593
SspMI	CTAG	2 cut(s)	1419, 1434
SstI	GAGCTC	1 cut(s)	372
StuI	AGGCCT	2 cut(s)	570, 1189
StyD4I	CCNGG	7 cut(s)	255, 299, 332, 342, 513, 1193, 1334
TaaI	ACNGT	5 cut(s)	611, 770, 1492, 1750, 1878
TaiI	ACGT	5 cut(s)	312, 405, 582, 618, 1865
TaqI	TCGA	6 cut(s)	390, 545, 830, 1058, 1145, 1169
TaqII	GACCGA	1 cut(s)	400
TauI	GCSGC	3 cut(s)	92, 249, 264
TfiI	GAWTC	2 cut(s)	420, 827
Tru1I	TTAA	1 cut(s)	1856
Tru9I	TTAA	1 cut(s)	1856
TscAI	CASTG	2 cut(s)	817, 1753
TseFI	GTSAC	6 cut(s)	24, 611, 898, 906, 1295, 1872
TseI	GCWGC	8 cut(s)	49, 451, 496, 499, 634, 645, 874, 1052
Tsp45I	GTSAC	6 cut(s)	24, 611, 898, 906, 1295, 1872
TspDTI	ATGAA	4 cut(s)	457, 572, 1332, 1811
TspGWI	ACGGA	1 cut(s)	262
TspRI	CASTG	2 cut(s)	817, 1753
Tth111I	GACNNNGTC	1 cut(s)	904
Van91I	CCANNNNNTGG	1 cut(s)	1200
VpaK11BI	GGWCC	4 cut(s)	336, 412, 592, 1903
XagI	CCTNNNNNAGG	1 cut(s)	254
XapI	RAATTY	6 cut(s)	696, 832, 1404, 1443, 1612, 1642
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1714
XspI	CTAG	2 cut(s)	1419, 1434
ZraI	GACGTC	2 cut(s)	310, 616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.