Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0010046

Physical Location & Seq

Genomic Coordinates Reverse (-)

4501779 .. 4503682

Gene Structure 1904 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00282440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGCGCCCAATCACCCAATCCCCGTCACCCTCGTCTCCCCAGCCACCGCAGCCCCACCGCCTCGTCCCACTAGCCGGCGCCGCCACCACCACCGCCTTCTCCCTCCTCCTCTTCCTCCTCGTCTGCTTCCGCAAAATCACCCGCAAACGCACCGCCCCCGAAGCCGACTCCAAGCCCCCCACCGCTTCTCCTACTCCCTCCTCCGACGCGCCACCGACTCCTTCTCCCCACACGCGCCGCCTCGGCCAGGGCGGCTCCGGCTCCGTATTCTTCGGAACGCTCCCCCACACCCGGCAGGACGTCGCCGTGAAGCTCATGGACTCCGGGTCCCTCCAGGGCGAGCGCGAGTTCCAGAACGAGCTCTTCTTCGCCTCCATGCTCGACTCCGGACACGTCATCTCGGTCCTCGGATTCTCCTCCGATCGGAAACGGCGCCGTATGCTGCTGGTTTACGAGTTCATGAGCAACGGGAACTTGCAGGACGCGCTGCTGCACCGGAAGTGCCCGGAGCTGATGGAGTGGAAGAAGAGGTTTTCGATTATGGTGGATGTAGCTAAAGGTCTTTGCTACCTTCATGGATTGGACCCGCCGGTTGTTCACGGTGACGTCAAGCCGAGTAATGTGCTGCTGGACGGCAGCTTCGATGTGAAGATTGCCGATTTCGGGCTGGCGAGGCTAAAGTCGGAAATTCAGGTTGTGATTGGGGAGGATGTGAAGAAGAGTGATGGTGTGGTGGTGAAGAAGGAGGGGGTTGAAGACTGTGGCTCTGTGGTTGAGGAAACCGAGAGTTTTAGTGTTGCCACTGCAGGGTTTGAGGATTCGAATCTGGGAGTTGATCAGTCGCCGGAGAGTTTAGTGATCAAGCTGCCTGTTTCGCCGGAGACTCCGGAGAATGGGAGTGGTGTGAAGGACTATGTGATGGAGTGGATTGGGAATGAGATTGGGAATGAGAGGCCCACGGCTGCTTCGAGTAGTGAAATGGTGGGGAGGTCGGAGAAGAAGAAGAAGAAGAATAAGAATAAGAAGAGGAGTAGGAAGAGATTGGATTGGTGGATGTCGATGGAGGAGAGTGGGAAAGTTTCGAGCAAGGAGAAGAGGAGGCCTGCCAGGGAATGGTGGAAGGAGGAGTATTGTGAGGAGCTGACAAAGAAGAAAAAGAAGAAGGATAAGAAGCAGAGTAAAGGAATGAGCTTTGATGAGAATGAGAGTGACTGGTGGCCACACGACGATGAATTGTATGCTGAGACCAGGAAGAAGAAGAAGAGTAGGAGCAGGAGTTGGGGGAGTATGAGTAGTATTGATTGGTGGTTGGATGGAATTCGCCGTAATGCTAGTAATAATTCTGTTAGTGGGGAAATTCCTAAAAGCTGTGGCATGAGTAGTACTCCAAGTATGAGAGGAACTGTATGTTATGTTGCCCCTGAATATGGTTTTGGTGGTGATCCTTCAGAATTATGTGATGTTTATAGTTTTGGGGTGTTGTTGTTGGTTGTTATAGCCGGAAGGCGCCCACTTCAGGTAACAAATTCGCCTCTGTCAGAGTTCCAGAGAGCAAACTTGTTGTCTTGGGCACGCCATCTTGCTCGTGCTGGCAAGCTTATTGATCTTGTTGATAAGTCCATTCAGGGTCTGGAGCAAGAACAAGCTCTCCTTTGCATCACTGTGGCATTAGTTTGTTTGCAAAAGATACCTGCTCGCCGGCCTTCAATGAAAGAGGTTGTGGGGATGCTGACTGGTGAGTTAGAACCACCCAAATTACCACCGGAGTTAACCACGTCAGCTCAGTCACGGTTCTCACACAAGTCCCATAGAAAGGCCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

607

Amino Acids

67.55

Weight (kDa)

9.23

Isoelectric Point (pI)

59.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	79 - 226	1.2e-24	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	79 - 228	2.5e-25	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010046)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25390 AT4G25390 AT5G51770
fragaria_vesca	FvH4_7g28580 FvH4_7g28580
malus_domestica	MD12G1112300.v1.1
prunus_persica	Prupe.2G285800_v2.0.a1
pyrus_communis	pycom01g20260 pycom07g23830
rosa_chinensis	RchiOBHm_Chr1g0375991
rosa_laevigata	RLG00000026637
rosa_multiflora	Rmu_co8192330.1_g000001 Rmu_ssc0000116.1_g000012
rosa_roxburghii	Rroxscaffold_4G00282440
rosa_rugosa	Rorug01G0393500 Rorug02G0306800
rosa_samantha	Rh1AG404800 Rh1BG368300 Rh1CG381200 Rh1DG398200
rosa_wichuraiana	Rw1G035900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	303, 609
Acc36I	ACCTGC	1 cut(s)	1699
AccB1I	GGYRCC	3 cut(s)	77, 432, 1506
AccB7I	CCANNNNNTGG	1 cut(s)	1113
AccII	CGCG	4 cut(s)	209, 235, 345, 485
AccIII	TCCGGA	2 cut(s)	386, 886
AclWI	GGATC	1 cut(s)	1436
AcoI	YGGCCR	2 cut(s)	244, 1217
AcsI	RAATTY	4 cut(s)	687, 1317, 1356, 1525
AcuI	CTGAAG	2 cut(s)	1431, 1499
AcyI	GRCGYC	5 cut(s)	78, 300, 433, 606, 1507
AfaI	GTAC	1 cut(s)	1384
AflIII	ACRYGT	1 cut(s)	391
AgsI	TTSAA	2 cut(s)	755, 1707
AhdI	GACNNNNNGTC	1 cut(s)	325
AjiI	CACGTC	2 cut(s)	394, 1776
AjnI	CCWGG	4 cut(s)	246, 333, 1106, 1247
AjuI	GAANNNNNNNTTGG	2 cut(s)	1416, 1448
AloI	GAACNNNNNNTCC	2 cut(s)	1632, 1664
Alw21I	GWGCWC	1 cut(s)	363
Alw26I	GTCTC	3 cut(s)	39, 875, 1238
AlwI	GGATC	1 cut(s)	1436
AlwNI	CAGNNNCTG	1 cut(s)	1630
Aor13HI	TCCGGA	2 cut(s)	386, 886
AoxI	GGCC	6 cut(s)	244, 953, 1100, 1217, 1700, 1815
ApeKI	GCWGC	8 cut(s)	49, 442, 487, 490, 625, 636, 865, 962
ApoI	RAATTY	4 cut(s)	687, 1317, 1356, 1525
ArsI	GACNNNNNNTTYG	4 cut(s)	623, 655, 1547, 1579
AspLEI	GCGC	8 cut(s)	6, 80, 211, 237, 345, 435, 487, 1509
AspS9I	GGNCC	5 cut(s)	327, 403, 583, 954, 1816
AsuC2I	CCSGG	4 cut(s)	292, 325, 506, 1819
AsuHPI	GGTGA	7 cut(s)	4, 18, 130, 614, 748, 1451, 1748
AsuII	TTCGAA	1 cut(s)	821
AvaII	GGWCC	3 cut(s)	327, 403, 583
BaeGI	GKGCMC	2 cut(s)	506, 1573
BalI	TGGCCA	1 cut(s)	1219
BanI	GGYRCC	3 cut(s)	77, 432, 1506
BanII	GRGCYC	1 cut(s)	363
BauI	CACGAG	1 cut(s)	1584
BbsI	GAAGAC	1 cut(s)	762
Bbv12I	GWGCWC	1 cut(s)	363
BbvI	GCAGC	8 cut(s)	61, 429, 474, 477, 612, 648, 852, 949
BccI	CCATC	6 cut(s)	508, 719, 913, 1054, 1307, 1584
BceAI	ACGGC	6 cut(s)	290, 420, 446, 649, 975, 1308
BcgI	CGANNNNNNTGC	2 cut(s)	604, 638
BciT130I	CCWGG	4 cut(s)	248, 335, 1108, 1249
BclI	TGATCA	2 cut(s)	835, 858
BcnI	CCSGG	4 cut(s)	292, 325, 506, 1819
BcoDI	GTCTC	3 cut(s)	39, 875, 1238
BfaI	CTAG	2 cut(s)	71, 1332
BfmI	CTRYAG	1 cut(s)	804
BfoI	RGCGCY	3 cut(s)	81, 436, 1510
BfuAI	ACCTGC	1 cut(s)	1699
BglI	GCCNNNNNGGC	2 cut(s)	243, 252
BmcAI	AGTACT	1 cut(s)	1384
Bme1390I	CCNGG	8 cut(s)	248, 292, 325, 335, 506, 1108, 1249, 1819
Bme18I	GGWCC	3 cut(s)	327, 403, 583
BmeRI	GACNNNNNGTC	1 cut(s)	325
BmgBI	CACGTC	2 cut(s)	394, 1776
BmgT120I	GGNCC	5 cut(s)	327, 403, 583, 954, 1816
BmiI	GGNNCC	8 cut(s)	79, 256, 262, 328, 329, 434, 585, 1508
BmrFI	CCNGG	8 cut(s)	248, 292, 325, 335, 506, 1108, 1249, 1819
BmsI	GCATC	2 cut(s)	1665, 1716
BpiI	GAAGAC	1 cut(s)	762
BplI	GAGNNNNNCTC	2 cut(s)	1369, 1401
BpmI	CTGGAG	2 cut(s)	317, 1652
Bpu14I	TTCGAA	1 cut(s)	821
BpuMI	CCSGG	4 cut(s)	292, 325, 506, 1819
BsaBI	GATNNNNATC	1 cut(s)	822
BsaHI	GRCGYC	5 cut(s)	78, 300, 433, 606, 1507
BsaI	GGTCTC	1 cut(s)	1238
BsaJI	CCNNGG	6 cut(s)	241, 247, 334, 406, 957, 1107
BsaWI	WCCGGW	4 cut(s)	386, 495, 886, 1762
Bse118I	RCCGGY	3 cut(s)	74, 589, 1698
Bse1I	ACTGG	2 cut(s)	1217, 1738
Bse8I	GATNNNNATC	1 cut(s)	822
BseAI	TCCGGA	2 cut(s)	386, 886
BseBI	CCWGG	4 cut(s)	248, 335, 1108, 1249
BseDI	CCNNGG	6 cut(s)	241, 247, 334, 406, 957, 1107
BseGI	GGATG	5 cut(s)	553, 715, 1059, 1318, 1731
BseJI	GATNNNNATC	1 cut(s)	822
BseMII	CTCAG	2 cut(s)	1233, 1796
BseNI	ACTGG	2 cut(s)	1217, 1738
BseSI	GKGCMC	2 cut(s)	506, 1573
BseXI	GCAGC	8 cut(s)	61, 429, 474, 477, 612, 648, 852, 949
BseYI	CCCAGC	1 cut(s)	39
BsgI	GTGCAG	1 cut(s)	476
Bsh1236I	CGCG	4 cut(s)	209, 235, 345, 485
Bsh1285I	CGRYCG	1 cut(s)	424
BshFI	GGCC	6 cut(s)	246, 955, 1102, 1219, 1702, 1817
BshNI	GGYRCC	3 cut(s)	77, 432, 1506
BsiEI	CGRYCG	1 cut(s)	424
BsiHKAI	GWGCWC	1 cut(s)	363
BslFI	GGGAC	3 cut(s)	50, 313, 1789
BsmAI	GTCTC	3 cut(s)	39, 875, 1238
BsmBI	CGTCTC	1 cut(s)	39
BsmFI	GGGAC	3 cut(s)	50, 313, 1789
BsnI	GGCC	6 cut(s)	246, 955, 1102, 1219, 1702, 1817
Bso31I	GGTCTC	1 cut(s)	1238
Bsp119I	TTCGAA	1 cut(s)	821
Bsp1286I	GDGCHC	3 cut(s)	363, 506, 1573
Bsp13I	TCCGGA	2 cut(s)	386, 886
Bsp143I	GATC	5 cut(s)	421, 835, 858, 1441, 1603
BspANI	GGCC	6 cut(s)	246, 955, 1102, 1219, 1702, 1817
BspCNI	CTCAG	2 cut(s)	1234, 1795
BspEI	TCCGGA	2 cut(s)	386, 886
BspFNI	CGCG	4 cut(s)	209, 235, 345, 485
BspHI	TCATGA	1 cut(s)	459
BspLI	GGNNCC	8 cut(s)	79, 256, 262, 328, 329, 434, 585, 1508
BspMAI	CTGCAG	1 cut(s)	808
BspMI	ACCTGC	1 cut(s)	1699
BspPI	GGATC	1 cut(s)	1436
BspQI	GCTCTTC	1 cut(s)	368
BspT104I	TTCGAA	1 cut(s)	821
BspT107I	GGYRCC	3 cut(s)	77, 432, 1506
BspTNI	GGTCTC	1 cut(s)	1238
BsrFI	RCCGGY	3 cut(s)	74, 589, 1698
BsrI	ACTGG	2 cut(s)	1217, 1738
BssAI	RCCGGY	3 cut(s)	74, 589, 1698
BssECI	CCNNGG	6 cut(s)	241, 247, 334, 406, 957, 1107
BssMI	GATC	5 cut(s)	421, 835, 858, 1441, 1603
BssNI	GRCGYC	5 cut(s)	78, 300, 433, 606, 1507
BssSI	CACGAG	1 cut(s)	1584
Bst2BI	CACGAG	1 cut(s)	1584
Bst2UI	CCWGG	4 cut(s)	248, 335, 1108, 1249
Bst4CI	ACNGT	5 cut(s)	602, 761, 1405, 1663, 1791
Bst6I	CTCTTC	8 cut(s)	116, 368, 521, 713, 1019, 1031, 1088, 1256
BstACI	GRCGYC	5 cut(s)	78, 300, 433, 606, 1507
BstBI	TTCGAA	1 cut(s)	821
BstC8I	GCNNGC	9 cut(s)	76, 341, 669, 1104, 1573, 1591, 1595, 1696, 1700
BstDEI	CTNAG	2 cut(s)	1242, 1782
BstDSI	CCRYGG	1 cut(s)	957
BstENI	CCTNNNNNAGG	1 cut(s)	245
BstF5I	GGATG	5 cut(s)	553, 715, 1059, 1318, 1731
BstFNI	CGCG	4 cut(s)	209, 235, 345, 485
BstH2I	RGCGCY	3 cut(s)	81, 436, 1510
BstHHI	GCGC	8 cut(s)	6, 80, 211, 237, 345, 435, 487, 1509
BstKTI	GATC	5 cut(s)	424, 838, 861, 1444, 1606
BstMAI	GTCTC	3 cut(s)	39, 875, 1238
BstMBI	GATC	5 cut(s)	421, 835, 858, 1441, 1603
BstMCI	CGRYCG	1 cut(s)	424
BstNI	CCWGG	4 cut(s)	248, 335, 1108, 1249
BstSCI	CCNGG	8 cut(s)	246, 290, 323, 333, 504, 1106, 1247, 1817
BstSFI	CTRYAG	1 cut(s)	804
BstSLI	GKGCMC	2 cut(s)	506, 1573
BstUI	CGCG	4 cut(s)	209, 235, 345, 485
BstV1I	GCAGC	8 cut(s)	61, 429, 474, 477, 612, 648, 852, 949
BstV2I	GAAGAC	1 cut(s)	762
BsuRI	GGCC	6 cut(s)	246, 955, 1102, 1219, 1702, 1817
BtgI	CCRYGG	1 cut(s)	957
BtrI	CACGTC	2 cut(s)	394, 1776
BtsCI	GGATG	5 cut(s)	553, 715, 1059, 1318, 1731
BtsI	GCAGTG	1 cut(s)	801
BtsIMutI	CAGTG	2 cut(s)	801, 1659
BveI	ACCTGC	1 cut(s)	1699
Cac8I	GCNNGC	9 cut(s)	76, 341, 669, 1104, 1573, 1591, 1595, 1696, 1700
CaiI	CAGNNNCTG	1 cut(s)	1630
CciI	TCATGA	1 cut(s)	459
CfoI	GCGC	8 cut(s)	6, 80, 211, 237, 345, 435, 487, 1509
Cfr10I	RCCGGY	3 cut(s)	74, 589, 1698
Cfr13I	GGNCC	5 cut(s)	327, 403, 583, 954, 1816
CseI	GACGC	2 cut(s)	215, 491
Csp6I	GTAC	1 cut(s)	1383
CviAII	CATG	5 cut(s)	316, 376, 460, 575, 1375
CviQI	GTAC	1 cut(s)	1383
DdeI	CTNAG	2 cut(s)	1242, 1782
DinI	GGCGCC	3 cut(s)	79, 434, 1508
DpnI	GATC	5 cut(s)	423, 837, 860, 1443, 1605
DpnII	GATC	5 cut(s)	421, 835, 858, 1441, 1603
DriI	GACNNNNNGTC	1 cut(s)	325
EaeI	YGGCCR	2 cut(s)	244, 1217
Eam1104I	CTCTTC	8 cut(s)	116, 368, 521, 713, 1019, 1031, 1088, 1256
Eam1105I	GACNNNNNGTC	1 cut(s)	325
EarI	CTCTTC	8 cut(s)	116, 368, 521, 713, 1019, 1031, 1088, 1256
Ecl136II	GAGCTC	1 cut(s)	361
Eco147I	AGGCCT	1 cut(s)	1102
Eco24I	GRGCYC	1 cut(s)	363
Eco31I	GGTCTC	1 cut(s)	1238
Eco47I	GGWCC	3 cut(s)	327, 403, 583
Eco53kI	GAGCTC	1 cut(s)	361
Eco57I	CTGAAG	2 cut(s)	1431, 1499
EcoICRI	GAGCTC	1 cut(s)	361
EcoNI	CCTNNNNNAGG	1 cut(s)	245
EcoO109I	RGGNCCY	1 cut(s)	327
EcoRI	GAATTC	1 cut(s)	1317
EcoRII	CCWGG	4 cut(s)	246, 333, 1106, 1247
EcoT38I	GRGCYC	1 cut(s)	363
EgeI	GGCGCC	3 cut(s)	79, 434, 1508
EheI	GGCGCC	3 cut(s)	79, 434, 1508
Esp3I	CGTCTC	1 cut(s)	39
FaeI	CATG	5 cut(s)	319, 379, 463, 578, 1378
FalI	AAGNNNNNCTT	2 cut(s)	1635, 1667
FaqI	GGGAC	3 cut(s)	50, 313, 1789
FatI	CATG	5 cut(s)	315, 375, 459, 574, 1374
FauI	CCCGC	2 cut(s)	149, 594
FbaI	TGATCA	2 cut(s)	835, 858
FokI	GGATG	5 cut(s)	560, 722, 1066, 1325, 1738
FriOI	GRGCYC	1 cut(s)	363
FspBI	CTAG	2 cut(s)	71, 1332
GlaI	GCGC	8 cut(s)	5, 79, 210, 236, 344, 434, 486, 1508
GsaI	CCCAGC	1 cut(s)	43
GsuI	CTGGAG	2 cut(s)	317, 1652
HaeII	RGCGCY	3 cut(s)	81, 436, 1510
HaeIII	GGCC	6 cut(s)	246, 955, 1102, 1219, 1702, 1817
HgaI	GACGC	2 cut(s)	215, 491
HhaI	GCGC	8 cut(s)	6, 80, 211, 237, 345, 435, 487, 1509
Hin1I	GRCGYC	5 cut(s)	78, 300, 433, 606, 1507
Hin1II	CATG	5 cut(s)	319, 379, 463, 578, 1378
Hin6I	GCGC	8 cut(s)	4, 78, 209, 235, 343, 433, 485, 1507
HinP1I	GCGC	8 cut(s)	4, 78, 209, 235, 343, 433, 485, 1507
HincII	GTYRAC	1 cut(s)	1770
HindII	GTYRAC	1 cut(s)	1770
HindIII	AAGCTT	1 cut(s)	1595
HinfI	GANTC	8 cut(s)	167, 217, 320, 383, 411, 818, 823, 883
HpaI	GTTAAC	1 cut(s)	1770
HphI	GGTGA	7 cut(s)	4, 18, 130, 614, 748, 1451, 1748
Hpy166II	GTNNAC	3 cut(s)	451, 598, 1770
Hpy188I	TCNGA	9 cut(s)	205, 275, 410, 421, 426, 685, 994, 1450, 1540
Hpy188III	TCNNGA	6 cut(s)	352, 387, 460, 887, 1546, 1631
Hpy8I	GTNNAC	3 cut(s)	451, 598, 1770
Hpy99I	CGWCG	3 cut(s)	209, 305, 1229
HpyCH4III	ACNGT	5 cut(s)	602, 761, 1405, 1663, 1791
HpyCH4IV	ACGT	4 cut(s)	300, 393, 606, 1775
HpyCH4V	TGCA	5 cut(s)	478, 493, 806, 1656, 1681
HpyF3I	CTNAG	2 cut(s)	1242, 1782
HpySE526I	ACGT	4 cut(s)	300, 393, 606, 1775
Hsp92I	GRCGYC	5 cut(s)	78, 300, 433, 606, 1507
Hsp92II	CATG	5 cut(s)	319, 379, 463, 578, 1378
HspAI	GCGC	8 cut(s)	4, 78, 209, 235, 343, 433, 485, 1507
KasI	GGCGCC	3 cut(s)	77, 432, 1506
KflI	GGGWCCC	1 cut(s)	327
Kpn2I	TCCGGA	2 cut(s)	386, 886
KroI	GCCGGC	2 cut(s)	74, 1698
KroNI	GCCGGC	2 cut(s)	76, 1700
Ksp22I	TGATCA	2 cut(s)	835, 858
KspAI	GTTAAC	1 cut(s)	1770
Kzo9I	GATC	5 cut(s)	421, 835, 858, 1441, 1603
LguI	GCTCTTC	1 cut(s)	368
LmnI	GCTCC	7 cut(s)	260, 266, 285, 508, 1138, 1269, 1633
Lsp1109I	GCAGC	8 cut(s)	61, 429, 474, 477, 612, 648, 852, 949
LweI	GCATC	2 cut(s)	1665, 1716
MaeI	CTAG	2 cut(s)	71, 1332
MaeII	ACGT	4 cut(s)	300, 393, 606, 1775
MaeIII	GTNAC	5 cut(s)	24, 602, 1208, 1519, 1785
MalI	GATC	5 cut(s)	423, 837, 860, 1443, 1605
MboI	GATC	5 cut(s)	421, 835, 858, 1441, 1603
MhlI	GDGCHC	3 cut(s)	363, 506, 1573
MlsI	TGGCCA	1 cut(s)	1219
MluCI	AATT	8 cut(s)	687, 1232, 1317, 1339, 1356, 1451, 1525, 1754
MluNI	TGGCCA	1 cut(s)	1219
Mly113I	GGCGCC	3 cut(s)	78, 433, 1507
MlyI	GAGTC	5 cut(s)	161, 211, 314, 377, 877
MmeI	TCCRAC	4 cut(s)	228, 663, 972, 1290
Mox20I	TGGCCA	1 cut(s)	1219
MroI	TCCGGA	2 cut(s)	386, 886
MroNI	GCCGGC	2 cut(s)	74, 1698
MscI	TGGCCA	1 cut(s)	1219
MseI	TTAA	1 cut(s)	1769
MslI	CAYNNNNRTG	2 cut(s)	1227, 1661
Msp20I	TGGCCA	1 cut(s)	1219
MspR9I	CCNGG	8 cut(s)	248, 292, 325, 335, 506, 1108, 1249, 1819
MvaI	CCWGG	4 cut(s)	248, 335, 1108, 1249
MvnI	CGCG	4 cut(s)	209, 235, 345, 485
NaeI	GCCGGC	2 cut(s)	76, 1700
NarI	GGCGCC	3 cut(s)	78, 433, 1507
NciI	CCSGG	4 cut(s)	292, 325, 506, 1819
NdeII	GATC	5 cut(s)	421, 835, 858, 1441, 1603
NgoMIV	GCCGGC	2 cut(s)	74, 1698
NlaIII	CATG	5 cut(s)	319, 379, 463, 578, 1378
NlaIV	GGNNCC	8 cut(s)	79, 256, 262, 328, 329, 434, 585, 1508
NmeAIII	GCCGAG	2 cut(s)	222, 639
NmuCI	GTSAC	4 cut(s)	24, 602, 1208, 1785
NspV	TTCGAA	1 cut(s)	821
PagI	TCATGA	1 cut(s)	459
PceI	AGGCCT	1 cut(s)	1102
PciSI	GCTCTTC	1 cut(s)	368
PcsI	WCGNNNNNNNCGW	2 cut(s)	639, 965
PdiI	GCCGGC	2 cut(s)	76, 1700
PfeI	GAWTC	3 cut(s)	411, 818, 823
PflMI	CCANNNNNTGG	1 cut(s)	1113
Ple19I	CGATCG	1 cut(s)	424
PleI	GAGTC	5 cut(s)	161, 211, 314, 377, 877
PluTI	GGCGCC	3 cut(s)	81, 436, 1510
PpsI	GAGTC	5 cut(s)	161, 211, 314, 377, 877
PpuMI	RGGWCCY	1 cut(s)	327
Psp124BI	GAGCTC	1 cut(s)	363
Psp5II	RGGWCCY	1 cut(s)	327
Psp6I	CCWGG	4 cut(s)	246, 333, 1106, 1247
PspFI	CCCAGC	1 cut(s)	39
PspGI	CCWGG	4 cut(s)	246, 333, 1106, 1247
PspN4I	GGNNCC	8 cut(s)	79, 256, 262, 328, 329, 434, 585, 1508
PspPI	GGNCC	5 cut(s)	327, 403, 583, 954, 1816
PspPPI	RGGWCCY	1 cut(s)	327
PstI	CTGCAG	1 cut(s)	808
PstNI	CAGNNNCTG	1 cut(s)	1630
PvuI	CGATCG	1 cut(s)	424
RsaI	GTAC	1 cut(s)	1384
RsaNI	GTAC	1 cut(s)	1383
RseI	CAYNNNNRTG	2 cut(s)	1227, 1661
SacI	GAGCTC	1 cut(s)	363
SapI	GCTCTTC	1 cut(s)	368
SaqAI	TTAA	1 cut(s)	1769
Sau3AI	GATC	5 cut(s)	421, 835, 858, 1441, 1603
Sau96I	GGNCC	5 cut(s)	327, 403, 583, 954, 1816
ScaI	AGTACT	1 cut(s)	1384
SchI	GAGTC	5 cut(s)	161, 211, 314, 377, 877
ScrFI	CCNGG	8 cut(s)	248, 292, 325, 335, 506, 1108, 1249, 1819
SduI	GDGCHC	3 cut(s)	363, 506, 1573
SfaNI	GCATC	2 cut(s)	1665, 1716
SfcI	CTRYAG	1 cut(s)	804
SfoI	GGCGCC	3 cut(s)	79, 434, 1508
SfuI	TTCGAA	1 cut(s)	821
SinI	GGWCC	3 cut(s)	327, 403, 583
SmiMI	CAYNNNNRTG	2 cut(s)	1227, 1661
Sse9I	AATT	8 cut(s)	687, 1232, 1317, 1339, 1356, 1451, 1525, 1754
SseBI	AGGCCT	1 cut(s)	1102
SspDI	GGCGCC	3 cut(s)	77, 432, 1506
SspMI	CTAG	2 cut(s)	71, 1332
SstI	GAGCTC	1 cut(s)	363
StuI	AGGCCT	1 cut(s)	1102
StyD4I	CCNGG	8 cut(s)	246, 290, 323, 333, 504, 1106, 1247, 1817
TaaI	ACNGT	5 cut(s)	602, 761, 1405, 1663, 1791
TaiI	ACGT	4 cut(s)	303, 396, 609, 1778
TaqI	TCGA	7 cut(s)	381, 536, 642, 821, 968, 1058, 1082
TaqII	GACCGA	1 cut(s)	391
TasI	AATT	8 cut(s)	687, 1232, 1317, 1339, 1356, 1451, 1525, 1754
TatI	WGTACW	1 cut(s)	1382
TauI	GCSGC	3 cut(s)	83, 240, 255
TfiI	GAWTC	3 cut(s)	411, 818, 823
Tru1I	TTAA	1 cut(s)	1769
Tru9I	TTAA	1 cut(s)	1769
TscAI	CASTG	2 cut(s)	808, 1666
TseFI	GTSAC	4 cut(s)	24, 602, 1208, 1785
TseI	GCWGC	8 cut(s)	49, 442, 487, 490, 625, 636, 865, 962
Tsp45I	GTSAC	4 cut(s)	24, 602, 1208, 1785
TspDTI	ATGAA	4 cut(s)	448, 563, 1245, 1724
TspGWI	ACGGA	1 cut(s)	253
TspRI	CASTG	2 cut(s)	808, 1666
Van91I	CCANNNNNTGG	1 cut(s)	1113
VpaK11BI	GGWCC	3 cut(s)	327, 403, 583
XagI	CCTNNNNNAGG	1 cut(s)	245
XapI	RAATTY	4 cut(s)	687, 1317, 1356, 1525
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1627
XspI	CTAG	2 cut(s)	71, 1332
ZraI	GACGTC	2 cut(s)	301, 607
ZrmI	AGTACT	1 cut(s)	1384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.