Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010046

Physical Location & Seq

Genomic Coordinates Forward (+)

63262241 .. 63264502

Gene Structure 2262 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ59967

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGCGCCCAATCACCGAATCCCCGTCACCCTCGTCTCCCCAGCCACCGCAGCCCCACCGCACCAACCCCCTCGTCCCACTGGCCGGCGCCGCCACCACCTCCGCGTTCTCCCTCCTCCTCTTCCTCCTCGTCTGCTTCCGCAAAATCACCCGCAAGCGCACCGCCCCCGAAGCCGACTCCAAGCCCCCCCACCGCTTCTCCTACTCCCTCCTCCGACGCGCCACAGACTCCTTCTCCCCCACGCGCCGCCTCGGCCAGGGCGGCTCCGGCTCCGTATTCTTCGGAACGCTCCCCCACACCCGGCAGGACGTCGCCGTCAAGCTGATGGACTCCGGGTCCCTCCAGGGCGAGCGCGAGTTCCAGAACGAGCTCTTCTTCGCCTCCATGCTGGACTCCCGGCACGTCATCTCGGTCCTGGGATTCTCCTCCGATCGGAAACGGCGCCGTATGCTGCTGGTTTACGAGTTCATGAGCAACGGGAACCTGCAGGACGCGATGCTGCACCGGAAGTGCCCGGAGCTGATGGAGTGGAAGAAGAGGTTTTCGATTATGGTGGATGTAGCTAAAGGTCTTTGCTACCTTCATGGATTGGACCCGCCGGTTGTGCACGGTGACGTCAAGCCGAGTAATGTGCTGCTGGACGGCGGCTTCAATGTGAAGATTGCCGATTTCGGGCTGGCGAGGCTAAAGTCGGAAATTCAGGTTGTGATTGGGGAGGATGTGAAGAAGAGTGATGGTGTGGAGGTGAAGAAGGAGGAGCTCGAAGACTGTGGCTCTGTGGTTGAGGAAACCGAGAGTGTTAGTGTTGCCACTGCAGGCTTTGAGGATTTGAATTTGGGAGTTGATCAGTCGCCGGAGAGTTTAGTGATCAAGCTGCCTGTTTCGCCGGAGACTCCGGTGACGGCCTCACCACCGGAGGAGAATGTGGATAAGGAGGGGGGAGAGAAGCCGAGTGTGAATAAGGATTGGTGGATGAGACAGGAGAATGGGAGTGGTGTGAAGGACTATGTGATGGAGTGGATTGGGAATGAGATTGGGAATGAGAGGCCCACGGCTGCTTCAAGTAGTGAAATGGTGGGGAGGTCGGAGAAGAAGAAGAAGAAGAATAAGAAGAAGAGGAATAGGAAGAGATTGGATTGGTGGATGTCGATGGAGGAGAGTGGGAAAGTTTCGAGCAAGGAGAAGAGGAGGCCTGCCAGGGAATGGTGGAAGGAGGAGTACTGTGAGGAGCTGACAAAGAAGAAAAAGAAGAAGGATAAGAAGCAGAGTAAAGGAATGAGCTTTGATGAGAATGAGAGTGACTGGTGGCCACACGATGATGAATTGTATGCTGAGACCAGGAAGAAGAAGAAGAGTAGGAGCAGGAGTTGGGGGAGTATGAGTAGTATTGATTGGTGTACGCCAAGTATGAGAGGAACTGTATGTTATGTTGCACCCGAATATGGTTTTGGTGGTGATCCTTCAGAATTATGTGATGTTTATAGTTTTGGGGTGTTGTTGTTGGTTGTTATAGCCGGAAGGCGCCCACTTCAGGTAACAAATTCGCCTCTGTCAGAGTTCCAGAGAGCGAATTTGTTGTCTTGGGCACGCCATCTTGCTCGTGCTGGGAAGCTTATTGATCTTGTTGATAAGTCCATTCAGGGTCTGGAGCAAGAACAAGCTCTCCTTTGCATCACCGTGGCATTAGTTTGTTTGCAAAAGATACCTGCTCGCCGGCCTTCAATGAAAGAGGTTGTGGGGATGCTGACTGGTGAGTTAGAACCACCCAAATTACCACCGGAGTTAACCACGTCAGCTCAGTCACGGTTCTCACACAAGTCCCATAGAAAGGTCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

612

Amino Acids

68.91

Weight (kDa)

9.16

Isoelectric Point (pI)

58.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	81 - 229	1e-24	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	81 - 231	1.2e-25	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010046)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25390 AT4G25390 AT5G51770
fragaria_vesca	FvH4_7g28580 FvH4_7g28580
malus_domestica	MD12G1112300.v1.1
prunus_persica	Prupe.2G285800_v2.0.a1
pyrus_communis	pycom01g20260 pycom07g23830
rosa_chinensis	RchiOBHm_Chr1g0375991
rosa_laevigata	RLG00000026637
rosa_multiflora	Rmu_co8192330.1_g000001 Rmu_ssc0000116.1_g000012
rosa_roxburghii	Rroxscaffold_4G00282440
rosa_rugosa	Rorug01G0393500 Rorug02G0306800
rosa_samantha	Rh1AG404800 Rh1BG368300 Rh1CG381200 Rh1DG398200
rosa_wichuraiana	Rw1G035900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	314
AatII	GACGTC	2 cut(s)	312, 618
Acc36I	ACCTGC	2 cut(s)	492, 1714
AccB1I	GGYRCC	3 cut(s)	86, 441, 1521
AccB7I	CCANNNNNTGG	1 cut(s)	1203
AccII	CGCG	5 cut(s)	104, 219, 244, 354, 494
AclWI	GGATC	1 cut(s)	1451
AcoI	YGGCCR	3 cut(s)	81, 253, 1307
AcsI	RAATTY	4 cut(s)	696, 832, 1540, 1570
AcuI	CTGAAG	2 cut(s)	1446, 1514
AcyI	GRCGYC	5 cut(s)	87, 309, 442, 615, 1522
AfaI	GTAC	2 cut(s)	1220, 1399
AfiI	CCNNNNNNNGG	9 cut(s)	83, 256, 300, 432, 672, 1203, 1442, 1531, 1828
AgsI	TTSAA	4 cut(s)	652, 832, 1062, 1722
AhdI	GACNNNNNGTC	1 cut(s)	334
AjiI	CACGTC	2 cut(s)	403, 1791
AjnI	CCWGG	5 cut(s)	255, 342, 414, 1196, 1337
AjuI	GAANNNNNNNTTGG	2 cut(s)	1431, 1463
AloI	GAACNNNNNNTCC	2 cut(s)	1647, 1679
Alw21I	GWGCWC	3 cut(s)	372, 609, 762
Alw26I	GTCTC	4 cut(s)	39, 884, 970, 1328
Alw44I	GTGCAC	1 cut(s)	605
AlwI	GGATC	1 cut(s)	1451
AlwNI	CAGNNNCTG	1 cut(s)	1645
AoxI	GGCC	7 cut(s)	81, 253, 903, 1046, 1190, 1307, 1715
ApaLI	GTGCAC	1 cut(s)	605
ApeKI	GCWGC	6 cut(s)	49, 451, 499, 634, 874, 1055
ApoI	RAATTY	4 cut(s)	696, 832, 1540, 1570
ArsI	GACNNNNNNTTYG	2 cut(s)	1562, 1594
AspLEI	GCGC	8 cut(s)	6, 89, 159, 221, 246, 354, 444, 1524
AspS9I	GGNCC	5 cut(s)	336, 412, 592, 1047, 1831
AsuC2I	CCSGG	4 cut(s)	301, 334, 397, 515
AvaII	GGWCC	4 cut(s)	336, 412, 592, 1831
BaeGI	GKGCMC	3 cut(s)	515, 609, 1588
BalI	TGGCCA	1 cut(s)	1309
BanI	GGYRCC	3 cut(s)	86, 441, 1521
BanII	GRGCYC	2 cut(s)	372, 762
BarI	GAAGNNNNNNTAC	2 cut(s)	1202, 1234
BauI	CACGAG	1 cut(s)	1599
BbsI	GAAGAC	1 cut(s)	771
Bbv12I	GWGCWC	3 cut(s)	372, 609, 762
BbvI	GCAGC	6 cut(s)	61, 438, 486, 621, 861, 1042
BccI	CCATC	6 cut(s)	319, 517, 728, 1006, 1144, 1599
BceAI	ACGGC	6 cut(s)	299, 429, 455, 658, 918, 1068
BcgI	CGANNNNNNTGC	2 cut(s)	613, 647
BciT130I	CCWGG	5 cut(s)	257, 344, 416, 1198, 1339
BclI	TGATCA	2 cut(s)	844, 867
BcnI	CCSGG	4 cut(s)	301, 334, 397, 515
BcoDI	GTCTC	4 cut(s)	39, 884, 970, 1328
BfmI	CTRYAG	2 cut(s)	485, 813
BfoI	RGCGCY	3 cut(s)	90, 445, 1525
BfuAI	ACCTGC	2 cut(s)	492, 1714
BglI	GCCNNNNNGGC	2 cut(s)	252, 261
BmcAI	AGTACT	1 cut(s)	1220
Bme1390I	CCNGG	9 cut(s)	257, 301, 334, 344, 397, 416, 515, 1198, 1339
Bme18I	GGWCC	4 cut(s)	336, 412, 592, 1831
BmeRI	GACNNNNNGTC	1 cut(s)	334
BmgBI	CACGTC	2 cut(s)	403, 1791
BmgT120I	GGNCC	5 cut(s)	336, 412, 592, 1047, 1831
BmiI	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1523
BmrFI	CCNGG	9 cut(s)	257, 301, 334, 344, 397, 416, 515, 1198, 1339
BmsI	GCATC	3 cut(s)	486, 1680, 1731
BpiI	GAAGAC	1 cut(s)	771
BpmI	CTGGAG	2 cut(s)	326, 1667
BpuMI	CCSGG	4 cut(s)	301, 334, 397, 515
BsaHI	GRCGYC	5 cut(s)	87, 309, 442, 615, 1522
BsaI	GGTCTC	1 cut(s)	1328
BsaJI	CCNNGG	7 cut(s)	250, 256, 343, 415, 1050, 1197, 1677
BsaWI	WCCGGW	5 cut(s)	504, 895, 913, 1777, 1833
Bsc4I	CCNNNNNNNGG	9 cut(s)	83, 256, 300, 432, 672, 1203, 1442, 1531, 1828
Bse118I	RCCGGY	3 cut(s)	83, 598, 1713
Bse1I	ACTGG	3 cut(s)	84, 1307, 1753
BseBI	CCWGG	5 cut(s)	257, 344, 416, 1198, 1339
BseDI	CCNNGG	7 cut(s)	250, 256, 343, 415, 1050, 1197, 1677
BseGI	GGATG	5 cut(s)	562, 724, 978, 1149, 1746
BseLI	CCNNNNNNNGG	9 cut(s)	83, 256, 300, 432, 672, 1203, 1442, 1531, 1828
BseMII	CTCAG	2 cut(s)	1323, 1811
BseNI	ACTGG	3 cut(s)	84, 1307, 1753
BseSI	GKGCMC	3 cut(s)	515, 609, 1588
BseXI	GCAGC	6 cut(s)	61, 438, 486, 621, 861, 1042
BseYI	CCCAGC	2 cut(s)	39, 1604
BsgI	GTGCAG	1 cut(s)	485
Bsh1236I	CGCG	5 cut(s)	104, 219, 244, 354, 494
Bsh1285I	CGRYCG	1 cut(s)	433
BshFI	GGCC	7 cut(s)	83, 255, 905, 1048, 1192, 1309, 1717
BshNI	GGYRCC	3 cut(s)	86, 441, 1521
BsiEI	CGRYCG	1 cut(s)	433
BsiHKAI	GWGCWC	3 cut(s)	372, 609, 762
BslFI	GGGAC	3 cut(s)	59, 322, 1804
BslI	CCNNNNNNNGG	9 cut(s)	83, 256, 300, 432, 672, 1203, 1442, 1531, 1828
BsmAI	GTCTC	4 cut(s)	39, 884, 970, 1328
BsmBI	CGTCTC	1 cut(s)	39
BsmFI	GGGAC	3 cut(s)	59, 322, 1804
BsnI	GGCC	7 cut(s)	83, 255, 905, 1048, 1192, 1309, 1717
Bso31I	GGTCTC	1 cut(s)	1328
Bsp1286I	GDGCHC	5 cut(s)	372, 515, 609, 762, 1588
Bsp143I	GATC	5 cut(s)	430, 844, 867, 1456, 1618
BspANI	GGCC	7 cut(s)	83, 255, 905, 1048, 1192, 1309, 1717
BspCNI	CTCAG	2 cut(s)	1324, 1810
BspFNI	CGCG	5 cut(s)	104, 219, 244, 354, 494
BspHI	TCATGA	1 cut(s)	468
BspLI	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1523
BspMAI	CTGCAG	2 cut(s)	489, 817
BspMI	ACCTGC	2 cut(s)	492, 1714
BspPI	GGATC	1 cut(s)	1451
BspQI	GCTCTTC	1 cut(s)	377
BspT107I	GGYRCC	3 cut(s)	86, 441, 1521
BspTNI	GGTCTC	1 cut(s)	1328
BsrFI	RCCGGY	3 cut(s)	83, 598, 1713
BsrI	ACTGG	3 cut(s)	84, 1307, 1753
BssAI	RCCGGY	3 cut(s)	83, 598, 1713
BssECI	CCNNGG	7 cut(s)	250, 256, 343, 415, 1050, 1197, 1677
BssMI	GATC	5 cut(s)	430, 844, 867, 1456, 1618
BssNI	GRCGYC	5 cut(s)	87, 309, 442, 615, 1522
BssSI	CACGAG	1 cut(s)	1599
Bst2BI	CACGAG	1 cut(s)	1599
Bst2UI	CCWGG	5 cut(s)	257, 344, 416, 1198, 1339
Bst4CI	ACNGT	6 cut(s)	611, 770, 1223, 1420, 1678, 1806
Bst6I	CTCTTC	8 cut(s)	125, 377, 530, 722, 1109, 1121, 1178, 1346
BstACI	GRCGYC	5 cut(s)	87, 309, 442, 615, 1522
BstC8I	GCNNGC	9 cut(s)	85, 155, 350, 678, 817, 1194, 1588, 1711, 1715
BstDEI	CTNAG	2 cut(s)	1332, 1797
BstDSI	CCRYGG	2 cut(s)	1050, 1677
BstENI	CCTNNNNNAGG	1 cut(s)	254
BstF5I	GGATG	5 cut(s)	562, 724, 978, 1149, 1746
BstFNI	CGCG	5 cut(s)	104, 219, 244, 354, 494
BstH2I	RGCGCY	3 cut(s)	90, 445, 1525
BstHHI	GCGC	8 cut(s)	6, 89, 159, 221, 246, 354, 444, 1524
BstKTI	GATC	5 cut(s)	433, 847, 870, 1459, 1621
BstMAI	GTCTC	4 cut(s)	39, 884, 970, 1328
BstMBI	GATC	5 cut(s)	430, 844, 867, 1456, 1618
BstMCI	CGRYCG	1 cut(s)	433
BstNI	CCWGG	5 cut(s)	257, 344, 416, 1198, 1339
BstSCI	CCNGG	9 cut(s)	255, 299, 332, 342, 395, 414, 513, 1196, 1337
BstSFI	CTRYAG	2 cut(s)	485, 813
BstSLI	GKGCMC	3 cut(s)	515, 609, 1588
BstUI	CGCG	5 cut(s)	104, 219, 244, 354, 494
BstV1I	GCAGC	6 cut(s)	61, 438, 486, 621, 861, 1042
BstV2I	GAAGAC	1 cut(s)	771
BsuRI	GGCC	7 cut(s)	83, 255, 905, 1048, 1192, 1309, 1717
BtgI	CCRYGG	2 cut(s)	1050, 1677
BtgZI	GCGATG	1 cut(s)	509
BtrI	CACGTC	2 cut(s)	403, 1791
BtsCI	GGATG	5 cut(s)	562, 724, 978, 1149, 1746
BtsI	GCAGTG	1 cut(s)	810
BtsIMutI	CAGTG	2 cut(s)	77, 810
BveI	ACCTGC	2 cut(s)	492, 1714
Cac8I	GCNNGC	9 cut(s)	85, 155, 350, 678, 817, 1194, 1588, 1711, 1715
CaiI	CAGNNNCTG	1 cut(s)	1645
CciI	TCATGA	1 cut(s)	468
CfoI	GCGC	8 cut(s)	6, 89, 159, 221, 246, 354, 444, 1524
Cfr10I	RCCGGY	3 cut(s)	83, 598, 1713
Cfr13I	GGNCC	5 cut(s)	336, 412, 592, 1047, 1831
CseI	GACGC	2 cut(s)	225, 500
Csp6I	GTAC	2 cut(s)	1219, 1398
CviAII	CATG	3 cut(s)	385, 469, 584
CviQI	GTAC	2 cut(s)	1219, 1398
DdeI	CTNAG	2 cut(s)	1332, 1797
DinI	GGCGCC	3 cut(s)	88, 443, 1523
DpnI	GATC	5 cut(s)	432, 846, 869, 1458, 1620
DpnII	GATC	5 cut(s)	430, 844, 867, 1456, 1618
DrdI	GACNNNNNNGTC	1 cut(s)	314
DriI	GACNNNNNGTC	1 cut(s)	334
DseDI	GACNNNNNNGTC	1 cut(s)	314
EaeI	YGGCCR	3 cut(s)	81, 253, 1307
Eam1104I	CTCTTC	8 cut(s)	125, 377, 530, 722, 1109, 1121, 1178, 1346
Eam1105I	GACNNNNNGTC	1 cut(s)	334
EarI	CTCTTC	8 cut(s)	125, 377, 530, 722, 1109, 1121, 1178, 1346
Ecl136II	GAGCTC	2 cut(s)	370, 760
Eco147I	AGGCCT	1 cut(s)	1192
Eco24I	GRGCYC	2 cut(s)	372, 762
Eco31I	GGTCTC	1 cut(s)	1328
Eco47I	GGWCC	4 cut(s)	336, 412, 592, 1831
Eco53kI	GAGCTC	2 cut(s)	370, 760
Eco57I	CTGAAG	2 cut(s)	1446, 1514
EcoICRI	GAGCTC	2 cut(s)	370, 760
EcoNI	CCTNNNNNAGG	1 cut(s)	254
EcoO109I	RGGNCCY	1 cut(s)	336
EcoRII	CCWGG	5 cut(s)	255, 342, 414, 1196, 1337
EcoT38I	GRGCYC	2 cut(s)	372, 762
EgeI	GGCGCC	3 cut(s)	88, 443, 1523
EheI	GGCGCC	3 cut(s)	88, 443, 1523
Esp3I	CGTCTC	1 cut(s)	39
FaeI	CATG	3 cut(s)	388, 472, 587
FalI	AAGNNNNNCTT	2 cut(s)	1650, 1682
FaqI	GGGAC	3 cut(s)	59, 322, 1804
FatI	CATG	3 cut(s)	384, 468, 583
FauI	CCCGC	2 cut(s)	158, 603
FbaI	TGATCA	2 cut(s)	844, 867
FokI	GGATG	5 cut(s)	569, 731, 985, 1156, 1753
FriOI	GRGCYC	2 cut(s)	372, 762
GlaI	GCGC	8 cut(s)	5, 88, 158, 220, 245, 353, 443, 1523
GsaI	CCCAGC	2 cut(s)	43, 1608
GsuI	CTGGAG	2 cut(s)	326, 1667
HaeII	RGCGCY	3 cut(s)	90, 445, 1525
HaeIII	GGCC	7 cut(s)	83, 255, 905, 1048, 1192, 1309, 1717
HgaI	GACGC	2 cut(s)	225, 500
HhaI	GCGC	8 cut(s)	6, 89, 159, 221, 246, 354, 444, 1524
Hin1I	GRCGYC	5 cut(s)	87, 309, 442, 615, 1522
Hin1II	CATG	3 cut(s)	388, 472, 587
Hin6I	GCGC	8 cut(s)	4, 87, 157, 219, 244, 352, 442, 1522
HinP1I	GCGC	8 cut(s)	4, 87, 157, 219, 244, 352, 442, 1522
HincII	GTYRAC	1 cut(s)	1785
HindII	GTYRAC	1 cut(s)	1785
HindIII	AAGCTT	1 cut(s)	1610
HinfI	GANTC	7 cut(s)	17, 176, 227, 329, 392, 420, 892
HpaI	GTTAAC	1 cut(s)	1785
Hpy166II	GTNNAC	4 cut(s)	460, 607, 1398, 1785
Hpy188I	TCNGA	8 cut(s)	215, 284, 430, 435, 694, 1087, 1465, 1555
Hpy188III	TCNNGA	4 cut(s)	361, 469, 1561, 1646
Hpy8I	GTNNAC	4 cut(s)	460, 607, 1398, 1785
Hpy99I	CGWCG	2 cut(s)	219, 314
HpyAV	CCTTC	9 cut(s)	241, 590, 745, 994, 1204, 1246, 1470, 1512, 1728
HpyCH4III	ACNGT	6 cut(s)	611, 770, 1223, 1420, 1678, 1806
HpyCH4IV	ACGT	4 cut(s)	309, 402, 615, 1790
HpyCH4V	TGCA	7 cut(s)	487, 502, 607, 815, 1433, 1671, 1696
HpyF3I	CTNAG	2 cut(s)	1332, 1797
HpySE526I	ACGT	4 cut(s)	309, 402, 615, 1790
Hsp92I	GRCGYC	5 cut(s)	87, 309, 442, 615, 1522
Hsp92II	CATG	3 cut(s)	388, 472, 587
HspAI	GCGC	8 cut(s)	4, 87, 157, 219, 244, 352, 442, 1522
KasI	GGCGCC	3 cut(s)	86, 441, 1521
KflI	GGGWCCC	1 cut(s)	336
KroI	GCCGGC	2 cut(s)	83, 1713
KroNI	GCCGGC	2 cut(s)	85, 1715
Ksp22I	TGATCA	2 cut(s)	844, 867
KspAI	GTTAAC	1 cut(s)	1785
Kzo9I	GATC	5 cut(s)	430, 844, 867, 1456, 1618
LguI	GCTCTTC	1 cut(s)	377
LmnI	GCTCC	8 cut(s)	269, 275, 294, 517, 757, 1228, 1359, 1648
Lsp1109I	GCAGC	6 cut(s)	61, 438, 486, 621, 861, 1042
LweI	GCATC	3 cut(s)	486, 1680, 1731
MaeII	ACGT	4 cut(s)	309, 402, 615, 1790
MaeIII	GTNAC	6 cut(s)	24, 611, 898, 1298, 1534, 1800
MalI	GATC	5 cut(s)	432, 846, 869, 1458, 1620
MboI	GATC	5 cut(s)	430, 844, 867, 1456, 1618
MhlI	GDGCHC	5 cut(s)	372, 515, 609, 762, 1588
MlsI	TGGCCA	1 cut(s)	1309
MluCI	AATT	7 cut(s)	696, 832, 1322, 1466, 1540, 1570, 1769
MluNI	TGGCCA	1 cut(s)	1309
Mly113I	GGCGCC	3 cut(s)	87, 442, 1522
MlyI	GAGTC	5 cut(s)	170, 221, 323, 386, 886
MmeI	TCCRAC	3 cut(s)	238, 672, 1065
Mox20I	TGGCCA	1 cut(s)	1309
MroNI	GCCGGC	2 cut(s)	83, 1713
MscI	TGGCCA	1 cut(s)	1309
MseI	TTAA	1 cut(s)	1784
MslI	CAYNNNNRTG	2 cut(s)	1317, 1676
Msp20I	TGGCCA	1 cut(s)	1309
MspR9I	CCNGG	9 cut(s)	257, 301, 334, 344, 397, 416, 515, 1198, 1339
MvaI	CCWGG	5 cut(s)	257, 344, 416, 1198, 1339
MvnI	CGCG	5 cut(s)	104, 219, 244, 354, 494
NaeI	GCCGGC	2 cut(s)	85, 1715
NarI	GGCGCC	3 cut(s)	87, 442, 1522
NciI	CCSGG	4 cut(s)	301, 334, 397, 515
NdeII	GATC	5 cut(s)	430, 844, 867, 1456, 1618
NgoMIV	GCCGGC	2 cut(s)	83, 1713
NlaIII	CATG	3 cut(s)	388, 472, 587
NlaIV	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1523
NmeAIII	GCCGAG	3 cut(s)	231, 648, 975
NmuCI	GTSAC	5 cut(s)	24, 611, 898, 1298, 1800
PagI	TCATGA	1 cut(s)	468
PceI	AGGCCT	1 cut(s)	1192
PciSI	GCTCTTC	1 cut(s)	377
PdiI	GCCGGC	2 cut(s)	85, 1715
PfeI	GAWTC	2 cut(s)	17, 420
PflMI	CCANNNNNTGG	1 cut(s)	1203
Ple19I	CGATCG	1 cut(s)	433
PleI	GAGTC	5 cut(s)	170, 221, 323, 386, 886
PluTI	GGCGCC	3 cut(s)	90, 445, 1525
PpsI	GAGTC	5 cut(s)	170, 221, 323, 386, 886
PpuMI	RGGWCCY	1 cut(s)	336
Psp124BI	GAGCTC	2 cut(s)	372, 762
Psp5II	RGGWCCY	1 cut(s)	336
Psp6I	CCWGG	5 cut(s)	255, 342, 414, 1196, 1337
PspFI	CCCAGC	2 cut(s)	39, 1604
PspGI	CCWGG	5 cut(s)	255, 342, 414, 1196, 1337
PspN4I	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1523
PspPI	GGNCC	5 cut(s)	336, 412, 592, 1047, 1831
PspPPI	RGGWCCY	1 cut(s)	336
PstI	CTGCAG	2 cut(s)	489, 817
PstNI	CAGNNNCTG	1 cut(s)	1645
PvuI	CGATCG	1 cut(s)	433
RsaI	GTAC	2 cut(s)	1220, 1399
RsaNI	GTAC	2 cut(s)	1219, 1398
RseI	CAYNNNNRTG	2 cut(s)	1317, 1676
SacI	GAGCTC	2 cut(s)	372, 762
SapI	GCTCTTC	1 cut(s)	377
SaqAI	TTAA	1 cut(s)	1784
Sau3AI	GATC	5 cut(s)	430, 844, 867, 1456, 1618
Sau96I	GGNCC	5 cut(s)	336, 412, 592, 1047, 1831
SbfI	CCTGCAGG	1 cut(s)	489
ScaI	AGTACT	1 cut(s)	1220
SchI	GAGTC	5 cut(s)	170, 221, 323, 386, 886
ScrFI	CCNGG	9 cut(s)	257, 301, 334, 344, 397, 416, 515, 1198, 1339
SdaI	CCTGCAGG	1 cut(s)	489
SduI	GDGCHC	5 cut(s)	372, 515, 609, 762, 1588
SfaNI	GCATC	3 cut(s)	486, 1680, 1731
SfcI	CTRYAG	2 cut(s)	485, 813
SfoI	GGCGCC	3 cut(s)	88, 443, 1523
SinI	GGWCC	4 cut(s)	336, 412, 592, 1831
SmiMI	CAYNNNNRTG	2 cut(s)	1317, 1676
Sse8387I	CCTGCAGG	1 cut(s)	489
Sse9I	AATT	7 cut(s)	696, 832, 1322, 1466, 1540, 1570, 1769
SseBI	AGGCCT	1 cut(s)	1192
SspDI	GGCGCC	3 cut(s)	86, 441, 1521
SstI	GAGCTC	2 cut(s)	372, 762
StuI	AGGCCT	1 cut(s)	1192
StyD4I	CCNGG	9 cut(s)	255, 299, 332, 342, 395, 414, 513, 1196, 1337
TaaI	ACNGT	6 cut(s)	611, 770, 1223, 1420, 1678, 1806
TaiI	ACGT	4 cut(s)	312, 405, 618, 1793
TaqI	TCGA	4 cut(s)	545, 762, 1148, 1172
TaqII	GACCGA	1 cut(s)	400
TasI	AATT	7 cut(s)	696, 832, 1322, 1466, 1540, 1570, 1769
TatI	WGTACW	1 cut(s)	1218
TauI	GCSGC	4 cut(s)	92, 249, 264, 648
TfiI	GAWTC	2 cut(s)	17, 420
Tru1I	TTAA	1 cut(s)	1784
Tru9I	TTAA	1 cut(s)	1784
TscAI	CASTG	2 cut(s)	84, 817
TseFI	GTSAC	5 cut(s)	24, 611, 898, 1298, 1800
TseI	GCWGC	6 cut(s)	49, 451, 499, 634, 874, 1055
Tsp45I	GTSAC	5 cut(s)	24, 611, 898, 1298, 1800
TspDTI	ATGAA	4 cut(s)	457, 572, 1335, 1739
TspGWI	ACGGA	1 cut(s)	262
TspRI	CASTG	2 cut(s)	84, 817
Van91I	CCANNNNNTGG	1 cut(s)	1203
VneI	GTGCAC	1 cut(s)	605
VpaK11BI	GGWCC	4 cut(s)	336, 412, 592, 1831
XagI	CCTNNNNNAGG	1 cut(s)	254
XapI	RAATTY	4 cut(s)	696, 832, 1540, 1570
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1642
ZraI	GACGTC	2 cut(s)	310, 616
ZrmI	AGTACT	1 cut(s)	1220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.