pycom07g26750

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0009257
Physical Location & Seq
Reverse (-)
26681428 .. 26684369
2942 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2169 bp
ATGGGTAGCTTTAGTGAAGAGGAAGAAGATTGTGGATTCTTTGATGCACAAGAGGAAATTGCATCAACATCCGATGCAGGGTCTGAAACCATTGAGATATTTGATTCCAATTCTTCCTTCACCAATTGGGTTCCAGCTGGTTTTCCGTATGATGTGTGGAATAGAACCCCGAGAAGTGTGAAGGAGCGGCGGGTTAAGTTTCGGGAGTGGATGGGACTGAGCGCGGATCGAGAGACTTCAGTGGAAATAGCAAGTGATGTAGCAGGGGAGGTTGAGAGAGTTAGAGAGAGTAGTGGGGCTGTGTTGAGAACCACCTCATGTGTTGAGGATGAGTATTGTTTGAGTCGGTCATTTGTGTCATGTCGGCGTAATGACTACTCCATTTATTCCTCAATTGAGTTGGATTGGAAGGATGATTCTGCATGTAGAGATGGGAATTTAGGGAAGCCATTGGAGTGTAATGCAGAGGAAGTGAGGCTGGATGGGAAGGTACGTGAAGGTCAAGAAGTGACCAAAGAGTCCGAGCGCACTTCTTGTTCTTCATCTTCATTGTCTCTACAATTGACGGAGAATCGAATGGAGGAGGCGAACAATAGAGCTGGGATACTGAAGAGAGCTAAGAAGGGGTGGTTGAGTAGGTTGCGGTCCATCGCATGCCTTGTTGATAGGCAAGGGGAGGATGATGAATTGGCACACGATGACAATGCTGCAATCATGGGGTTCAGGGCACAAAGAGTTAAGGTTCGCCAGTGCGGGAAGCGGTTGAAGGAACTTTCAGCACTTTACATGGGACAAGATATCCAGGCACATGAGGGCGCAATTTTGGCAATGAAATTCAGTCCCGATGGACAATACTTGGCAAGTGCTGGTGAAGATGGGATTCTGCGTGTCTGGCAAGTGGTGGAGGATGAGAGATCTAATGAACATGACATTCCGGAAATAGATCCATCCTGCATTTACTTCACAGTGAATCATCTCTCTGAACTAAATCCACTATTTTCGGAAAAGGATACAATAGGCAAATCAAGTAGCCTTAGGAAAACATCAGATTCAGCTTGTGTTATTTTTCCCCCAAAAGTCTTCCGGATATTGGAGAAACCGTTGCATGAATTTCACGGGCATGGTGGTGATATCTTGGATCTCTCTTGGTCAAGGAGTAATTATCTTCTGTCATCTTCGGTTGACAAAACTGTTCGTCTTTGGCAAGTGGGATGCGGTAGTTGCCTCAAAGTCTTTTCCCATAGTAATTATGTGACCAGTGTTCAATTTAATCCAGTGGATGAGAATTACTTCATCAGTGGTTCAATAGATGGCAAAGTACGTATTTGGGGAATTTCTTGCTGCCAAGTTGTTGATTGGAGTGATATAAGAGATATAGTTACTGCGGTGTGCTATCGCCCTGATGGGCAGGGAGGAATTGTTGGCTCAATGACAGGCAGTTGCCGCTTTTATAATATATCAGATAATCATTTGCAATTGGATGCTCAATTATGCTTGCAAAGTAAAAAGAAGTCCCCGTGCAGAAAGATTACAGGCTTCCAGTTTTTCCCACAAGACTCTAGCAAAGTGATGGTCACTTGTGCCGATTCAAAGGTCAGAATTCTTCATGGTCTATCTGTGGTCGGCAAGTATGCAGGAAACCAGACATCTGCTACTTTCACTTCAGATGGGAAACATATAGTCTCGGTTAATGAGGATTCTAGTGTATATGTATGGAACTGCAATAATCATGAAGAACGAGTTCTCTCTCAAGCAAAAAAGATAAGATCGATCTCCCAACCTTGTGAGCGCTTTTCCACGAATGTTTCTGTGGCAATACCTTGGTCTGGATTTAAATGTGGGACCGTAGAAAATGAGAGGCAATTTCAGGCTGTCGATGAGAATTTACCAGAGAGACTGCCTTTTTCCTCACCTGCATGTTTTTCTCTCAGCCAAGATTCTTTCCTTCAGTCTATTCCCAAGGGATCTGCGACTTGGCCAGAGGAGAAGCTTCCAACTTCGAGCCCACTGGCAAAGCAATCTACTATGCACAAATCCGAGTACAAGTTTCTTAAAACTTCTTGCCAGAACACATCCAGTTCACATGCATGGGGTATGGTTATTGTTACTGCAGGATGGGATGGATCGATCAGATCATTCCACAATTATGGTTTACCAGTAACCGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

723

Amino Acids

80.58

Weight (kDa)

5.56

Isoelectric Point (pI)

52.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_2nd PF25172 256 - 488 1.9e-14 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 265 - 301 1.1e-06 THOC3 beta-propeller domain
WD40_WDHD1_1st PF24817 266 - 311 7.1e-07 WDHD1 first WD40 domain
WD40_Gbeta PF25391 267 - 573 5e-12 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 267 - 302 4.4e-06 WDR5 beta-propeller domain
WD40 PF00400 267 - 298 3.4e-08 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 365 - 445 5.7e-12 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 365 - 490 7.2e-13 Prp19 WD40 domain
WD40 PF00400 366 - 401 4.6e-07 WD domain, G-beta repeat
Beta-prop_WDR5 PF25175 366 - 578 3e-30 WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 368 - 428 9.4e-09 WDR36/Utp21 second beta-propeller domain
WD40_CDC20-Fz PF24807 368 - 451 1.2e-07 CDC20/Fizzy WD40 domain
EIF3I PF24805 370 - 429 3.5e-06 EIF3I
Beta-prop_CAF1B_HIR1 PF24105 371 - 428 1.7e-08 CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3 PF25174 375 - 577 2.6e-18 THOC3 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 377 - 572 6.7e-10 WDR3 second beta-propeller domain
Beta-prop_WDR90_POC16_2nd PF23393 389 - 493 2.1e-06 WDR90/POC16, second beta-propeller
WD40 PF00400 406 - 443 3.9e-06 WD domain, G-beta repeat
Beta-prop_EML_2 PF23414 427 - 591 2.1e-09 Echinoderm microtubule-associated protein second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1452
AarI CACCTGC 1 cut(s) 1921
AasI GACNNNNNNGTC 1 cut(s) 517
Acc36I ACCTGC 1 cut(s) 1921
AccBSI CCGCTC 1 cut(s) 187
AccII CGCG 1 cut(s) 224
AccIII TCCGGA 2 cut(s) 934, 1083
AciI CCGC 9 cut(s) 187, 190, 224, 643, 753, 760, 1215, 1385, 1444
AclWI GGATC 5 cut(s) 234, 938, 1146, 1972, 2131
AcoI YGGCCR 1 cut(s) 1976
AcsI RAATTY 6 cut(s) 436, 833, 1109, 1332, 1599, 1882
AcuI CTGAAG 4 cut(s) 222, 629, 1647, 1931
AfaI GTAC 3 cut(s) 492, 1320, 2042
AfeI AGCGCT 1 cut(s) 1790
AfiI CCNNNNNNNGG 3 cut(s) 78, 1090, 1826
AgsI TTSAA 4 cut(s) 766, 1265, 1305, 1590
AjnI CCWGG 1 cut(s) 801
AjuI GAANNNNNNNTTGG 2 cut(s) 101, 133
AluBI AGCT 6 cut(s) 9, 137, 599, 617, 1055, 1990
AluI AGCT 6 cut(s) 9, 137, 599, 617, 1055, 1990
Alw26I GTCTC 4 cut(s) 227, 558, 1687, 1888
AlwI GGATC 5 cut(s) 234, 938, 1146, 1972, 2131
AlwNI CAGNNNCTG 1 cut(s) 83
Ama87I CYCGRG 1 cut(s) 169
Aor13HI TCCGGA 2 cut(s) 934, 1083
Aor51HI AGCGCT 1 cut(s) 1790
AoxI GGCC 1 cut(s) 1976
ApeKI GCWGC 2 cut(s) 707, 1341
ApoI RAATTY 6 cut(s) 436, 833, 1109, 1332, 1599, 1882
ArsI GACNNNNNNTTYG 2 cut(s) 1557, 1589
Asp700I GAANNNNTTC 2 cut(s) 1289, 1740
AspLEI GCGC 4 cut(s) 224, 528, 818, 1791
AspS9I GGNCC 2 cut(s) 645, 1842
AsuHPI GGTGA 4 cut(s) 112, 881, 1139, 1902
AvaI CYCGRG 1 cut(s) 169
AvaII GGWCC 2 cut(s) 645, 1842
AxyI CCTNAGG 1 cut(s) 1034
BaeGI GKGCMC 1 cut(s) 730
BalI TGGCCA 1 cut(s) 1978
BanII GRGCYC 1 cut(s) 2006
BbsI GAAGAC 1 cut(s) 1072
BbvI GCAGC 2 cut(s) 694, 1328
BcgI CGANNNNNNTGC 2 cut(s) 686, 720
BciT130I CCWGG 1 cut(s) 803
BciVI GTATCC 2 cut(s) 597, 1003
BcoDI GTCTC 4 cut(s) 227, 558, 1687, 1888
BfaI CTAG 2 cut(s) 1560, 1701
BfmI CTRYAG 1 cut(s) 2109
BfoI RGCGCY 1 cut(s) 1792
BfuAI ACCTGC 1 cut(s) 1921
BfuI GTATCC 2 cut(s) 597, 1003
BglII AGATCT 1 cut(s) 914
BisI GCNGC 4 cut(s) 188, 708, 1342, 1444
BlsI GCNGC 4 cut(s) 189, 709, 1343, 1445
Bme1390I CCNGG 1 cut(s) 803
Bme18I GGWCC 2 cut(s) 645, 1842
BmeT110I CYCGRG 1 cut(s) 169
BmgT120I GGNCC 2 cut(s) 645, 1842
BmiI GGNNCC 2 cut(s) 132, 1843
BmrFI CCNGG 1 cut(s) 803
BmsI GCATC 5 cut(s) 34, 64, 71, 1202, 1471
BpiI GAAGAC 1 cut(s) 1072
BpuEI CTTGAG 1 cut(s) 1734
Bsa29I ATCGAT 2 cut(s) 1769, 2126
BsaAI YACGTR 2 cut(s) 494, 1322
BsaJI CCNNGG 2 cut(s) 1820, 1959
BsaWI WCCGGW 2 cut(s) 934, 1083
BsaXI ACNNNNNCTCC 4 cut(s) 1085, 1115, 1404, 1434
Bsc4I CCNNNNNNNGG 3 cut(s) 78, 1090, 1826
Bse1I ACTGG 7 cut(s) 748, 1257, 1274, 1540, 2013, 2076, 2156
Bse21I CCTNAGG 1 cut(s) 1034
Bse3DI GCAATG 1 cut(s) 834
BseAI TCCGGA 2 cut(s) 934, 1083
BseBI CCWGG 1 cut(s) 803
BseCI ATCGAT 2 cut(s) 1769, 2126
BseDI CCNNGG 2 cut(s) 1820, 1959
BseLI CCNNNNNNNGG 3 cut(s) 78, 1090, 1826
BseMI GCAATG 1 cut(s) 834
BseMII CTCAG 2 cut(s) 209, 1942
BseNI ACTGG 7 cut(s) 748, 1257, 1274, 1540, 2013, 2076, 2156
BseRI GAGGAG 2 cut(s) 596, 1997
BseSI GKGCMC 1 cut(s) 730
BseXI GCAGC 2 cut(s) 694, 1328
BseYI CCCAGC 1 cut(s) 599
BsgI GTGCAG 1 cut(s) 1540
Bsh1236I CGCG 1 cut(s) 224
BshFI GGCC 1 cut(s) 1978
BshVI ATCGAT 2 cut(s) 1769, 2126
BsiHKCI CYCGRG 1 cut(s) 169
BsiSI CCGG 2 cut(s) 935, 1084
BslFI GGGAC 5 cut(s) 228, 804, 825, 1498, 1855
BslI CCNNNNNNNGG 3 cut(s) 78, 1090, 1826
BsmAI GTCTC 4 cut(s) 227, 558, 1687, 1888
BsmFI GGGAC 5 cut(s) 228, 804, 825, 1498, 1855
BsnI GGCC 1 cut(s) 1978
BsoBI CYCGRG 1 cut(s) 169
Bsp1286I GDGCHC 2 cut(s) 730, 2006
Bsp13I TCCGGA 2 cut(s) 934, 1083
BspACI CCGC 9 cut(s) 187, 190, 224, 643, 753, 760, 1215, 1385, 1444
BspANI GGCC 1 cut(s) 1978
BspCNI CTCAG 2 cut(s) 210, 1941
BspDI ATCGAT 2 cut(s) 1769, 2126
BspEI TCCGGA 2 cut(s) 934, 1083
BspFNI CGCG 1 cut(s) 224
BspHI TCATGA 1 cut(s) 1729
BspLI GGNNCC 2 cut(s) 132, 1843
BspMAI CTGCAG 1 cut(s) 2113
BspMI ACCTGC 1 cut(s) 1921
BspPI GGATC 5 cut(s) 234, 938, 1146, 1972, 2131
BsrBI CCGCTC 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 834
BsrI ACTGG 7 cut(s) 748, 1257, 1274, 1540, 2013, 2076, 2156
BssECI CCNNGG 2 cut(s) 1820, 1959
BssT1I CCWWGG 2 cut(s) 1820, 1959
Bst2UI CCWGG 1 cut(s) 803
Bst4CI ACNGT 5 cut(s) 967, 1101, 1192, 1846, 2164
Bst6I CTCTTC 2 cut(s) 12, 605
BstBAI YACGTR 2 cut(s) 494, 1322
BstC8I GCNNGC 2 cut(s) 655, 1496
BstDEI CTNAG 4 cut(s) 218, 618, 1034, 1928
BstFNI CGCG 1 cut(s) 224
BstH2I RGCGCY 1 cut(s) 1792
BstHHI GCGC 4 cut(s) 224, 528, 818, 1791
BstMAI GTCTC 4 cut(s) 227, 558, 1687, 1888
BstMWI GCNNNNNNNGC 4 cut(s) 824, 892, 1221, 1443
BstNI CCWGG 1 cut(s) 803
BstNSI RCATGY 4 cut(s) 426, 657, 1920, 2087
BstSCI CCNGG 1 cut(s) 801
BstSFI CTRYAG 1 cut(s) 2109
BstSLI GKGCMC 1 cut(s) 730
BstSNI TACGTA 1 cut(s) 1322
BstUI CGCG 1 cut(s) 224
BstV1I GCAGC 2 cut(s) 694, 1328
BstV2I GAAGAC 1 cut(s) 1072
BstX2I RGATCY 4 cut(s) 914, 943, 1138, 1964
BstXI CCANNNNNNTGG 1 cut(s) 2147
BstYI RGATCY 4 cut(s) 914, 943, 1138, 1964
Bsu15I ATCGAT 2 cut(s) 1769, 2126
Bsu36I CCTNAGG 1 cut(s) 1034
BsuI GTATCC 2 cut(s) 597, 1003
BsuRI GGCC 1 cut(s) 1978
BsuTUI ATCGAT 2 cut(s) 1769, 2126
BtgZI GCGATG 1 cut(s) 634
BtsIMutI CAGTG 7 cut(s) 246, 755, 972, 1264, 1281, 1303, 2006
BveI ACCTGC 1 cut(s) 1921
Cac8I GCNNGC 2 cut(s) 655, 1496
CaiI CAGNNNCTG 1 cut(s) 83
CciI TCATGA 1 cut(s) 1729
CfoI GCGC 4 cut(s) 224, 528, 818, 1791
Cfr13I GGNCC 2 cut(s) 645, 1842
ClaI ATCGAT 2 cut(s) 1769, 2126
Csp6I GTAC 3 cut(s) 491, 1319, 2041
CviQI GTAC 3 cut(s) 491, 1319, 2041
DdeI CTNAG 4 cut(s) 218, 618, 1034, 1928
DraI TTTAAA 1 cut(s) 1834
DrdI GACNNNNNNGTC 1 cut(s) 517
DseDI GACNNNNNNGTC 1 cut(s) 517
EaeI YGGCCR 1 cut(s) 1976
Eam1104I CTCTTC 2 cut(s) 12, 605
EarI CTCTTC 2 cut(s) 12, 605
Eco105I TACGTA 1 cut(s) 1322
Eco130I CCWWGG 2 cut(s) 1820, 1959
Eco24I GRGCYC 1 cut(s) 2006
Eco32I GATATC 2 cut(s) 799, 1132
Eco47I GGWCC 2 cut(s) 645, 1842
Eco47III AGCGCT 1 cut(s) 1790
Eco57I CTGAAG 4 cut(s) 222, 629, 1647, 1931
Eco81I CCTNAGG 1 cut(s) 1034
Eco88I CYCGRG 1 cut(s) 169
EcoRI GAATTC 1 cut(s) 1599
EcoRII CCWGG 1 cut(s) 801
EcoRV GATATC 2 cut(s) 799, 1132
EcoT14I CCWWGG 2 cut(s) 1820, 1959
EcoT22I ATGCAT 1 cut(s) 2089
EcoT38I GRGCYC 1 cut(s) 2006
ErhI CCWWGG 2 cut(s) 1820, 1959
FaqI GGGAC 5 cut(s) 228, 804, 825, 1498, 1855
FauI CCCGC 2 cut(s) 183, 746
Fnu4HI GCNGC 4 cut(s) 188, 708, 1342, 1444
FriOI GRGCYC 1 cut(s) 2006
Fsp4HI GCNGC 4 cut(s) 188, 708, 1342, 1444
FspBI CTAG 2 cut(s) 1560, 1701
GlaI GCGC 4 cut(s) 223, 527, 817, 1790
GluI GCNGC 4 cut(s) 188, 708, 1342, 1444
GsaI CCCAGC 1 cut(s) 603
HaeII RGCGCY 1 cut(s) 1792
HaeIII GGCC 1 cut(s) 1978
HapII CCGG 2 cut(s) 935, 1084
HhaI GCGC 4 cut(s) 224, 528, 818, 1791
Hin6I GCGC 4 cut(s) 222, 526, 816, 1789
HinP1I GCGC 4 cut(s) 222, 526, 816, 1789
HincII GTYRAC 1 cut(s) 1183
HindII GTYRAC 1 cut(s) 1183
HindIII AAGCTT 1 cut(s) 1988
HpaII CCGG 2 cut(s) 935, 1084
HphI GGTGA 4 cut(s) 112, 881, 1139, 1902
Hpy166II GTNNAC 3 cut(s) 1183, 2081, 2153
Hpy188III TCNNGA 8 cut(s) 203, 230, 503, 842, 935, 1084, 1730, 1827
Hpy8I GTNNAC 3 cut(s) 1183, 2081, 2153
HpyAV CCTTC 8 cut(s) 127, 175, 403, 481, 491, 616, 760, 1955
HpyCH4III ACNGT 5 cut(s) 967, 1101, 1192, 1846, 2164
HpyCH4IV ACGT 2 cut(s) 493, 1321
HpyF10VI GCNNNNNNNGC 4 cut(s) 824, 892, 1221, 1443
HpyF3I CTNAG 4 cut(s) 218, 618, 1034, 1928
HpySE526I ACGT 2 cut(s) 493, 1321
HspAI GCGC 4 cut(s) 222, 526, 816, 1789
Kpn2I TCCGGA 2 cut(s) 934, 1083
LmnI GCTCC 1 cut(s) 184
Lsp1109I GCAGC 2 cut(s) 694, 1328
LweI GCATC 5 cut(s) 34, 64, 71, 1202, 1471
MaeI CTAG 2 cut(s) 1560, 1701
MaeII ACGT 2 cut(s) 493, 1321
MaeIII GTNAC 6 cut(s) 508, 1252, 1378, 1573, 2104, 2158
MbiI CCGCTC 1 cut(s) 187
MfeI CAATTG 4 cut(s) 124, 393, 560, 1475
MflI RGATCY 4 cut(s) 914, 943, 1138, 1964
MhlI GDGCHC 2 cut(s) 730, 2006
MlsI TGGCCA 1 cut(s) 1978
MluNI TGGCCA 1 cut(s) 1978
MlyI GAGTC 3 cut(s) 352, 527, 1550
MmeI TCCRAC 2 cut(s) 381, 2018
Mox20I TGGCCA 1 cut(s) 1978
Mph1103I ATGCAT 1 cut(s) 2089
MroI TCCGGA 2 cut(s) 934, 1083
MroXI GAANNNNTTC 2 cut(s) 1289, 1740
MscI TGGCCA 1 cut(s) 1978
MseI TTAA 6 cut(s) 195, 738, 1269, 1689, 1833, 2052
MslI CAYNNNNRTG 6 cut(s) 454, 1119, 1125, 1915, 2086, 2145
Msp20I TGGCCA 1 cut(s) 1978
MspA1I CMGCKG 1 cut(s) 137
MspI CCGG 2 cut(s) 935, 1084
MspR9I CCNGG 1 cut(s) 803
MunI CAATTG 4 cut(s) 124, 393, 560, 1475
MvaI CCWGG 1 cut(s) 803
MvnI CGCG 1 cut(s) 224
MwoI GCNNNNNNNGC 4 cut(s) 824, 892, 1221, 1443
NlaIV GGNNCC 2 cut(s) 132, 1843
NmuCI GTSAC 3 cut(s) 508, 1252, 1573
NsiI ATGCAT 1 cut(s) 2089
NspI RCATGY 4 cut(s) 426, 657, 1920, 2087
PaeI GCATGC 1 cut(s) 657
PagI TCATGA 1 cut(s) 1729
PaqCI CACCTGC 1 cut(s) 1921
PdmI GAANNNNTTC 2 cut(s) 1289, 1740
PkrI GCNGC 4 cut(s) 189, 709, 1343, 1445
PleI GAGTC 3 cut(s) 351, 526, 1550
PpsI GAGTC 3 cut(s) 351, 526, 1550
Ppu21I YACGTR 2 cut(s) 494, 1322
PsiI TTATAA 1 cut(s) 1452
Psp6I CCWGG 1 cut(s) 801
PspFI CCCAGC 1 cut(s) 599
PspGI CCWGG 1 cut(s) 801
PspN4I GGNNCC 2 cut(s) 132, 1843
PspPI GGNCC 2 cut(s) 645, 1842
PstI CTGCAG 1 cut(s) 2113
PstNI CAGNNNCTG 1 cut(s) 83
PsuI RGATCY 4 cut(s) 914, 943, 1138, 1964
PvuII CAGCTG 1 cut(s) 137
RsaI GTAC 3 cut(s) 492, 1320, 2042
RsaNI GTAC 3 cut(s) 491, 1319, 2041
RseI CAYNNNNRTG 6 cut(s) 454, 1119, 1125, 1915, 2086, 2145
SaqAI TTAA 6 cut(s) 195, 738, 1269, 1689, 1833, 2052
SatI GCNGC 4 cut(s) 188, 708, 1342, 1444
Sau96I GGNCC 2 cut(s) 645, 1842
SchI GAGTC 3 cut(s) 352, 527, 1550
ScrFI CCNGG 1 cut(s) 803
SduI GDGCHC 2 cut(s) 730, 2006
SfaNI GCATC 5 cut(s) 34, 64, 71, 1202, 1471
SfcI CTRYAG 1 cut(s) 2109
SinI GGWCC 2 cut(s) 645, 1842
SmiI ATTTAAAT 1 cut(s) 1834
SmiMI CAYNNNNRTG 6 cut(s) 454, 1119, 1125, 1915, 2086, 2145
SmlI CTYRAG 1 cut(s) 1749
SmoI CTYRAG 1 cut(s) 1749
SnaBI TACGTA 1 cut(s) 1322
SphI GCATGC 1 cut(s) 657
SsiI CCGC 9 cut(s) 187, 190, 224, 643, 753, 760, 1215, 1385, 1444
SspMI CTAG 2 cut(s) 1560, 1701
StyD4I CCNGG 1 cut(s) 801
StyI CCWWGG 2 cut(s) 1820, 1959
SwaI ATTTAAAT 1 cut(s) 1834
TaaI ACNGT 5 cut(s) 967, 1101, 1192, 1846, 2164
TaiI ACGT 2 cut(s) 496, 1324
TaqI TCGA 6 cut(s) 229, 574, 1769, 1875, 2000, 2126
TaqII GACCGA 1 cut(s) 336
TatI WGTACW 1 cut(s) 2040
TauI GCSGC 2 cut(s) 190, 1446
Tru1I TTAA 6 cut(s) 195, 738, 1269, 1689, 1833, 2052
Tru9I TTAA 6 cut(s) 195, 738, 1269, 1689, 1833, 2052
TscAI CASTG 7 cut(s) 246, 755, 972, 1264, 1281, 1303, 2013
TseFI GTSAC 3 cut(s) 508, 1252, 1573
TseI GCWGC 2 cut(s) 707, 1341
Tsp45I GTSAC 3 cut(s) 508, 1252, 1573
TspDTI ATGAA 9 cut(s) 531, 537, 699, 845, 936, 1122, 1282, 1595, 1746
TspGWI ACGGA 2 cut(s) 135, 581
TspRI CASTG 7 cut(s) 246, 755, 972, 1264, 1281, 1303, 2013
VpaK11BI GGWCC 2 cut(s) 645, 1842
XapI RAATTY 6 cut(s) 436, 833, 1109, 1332, 1599, 1882
XceI RCATGY 4 cut(s) 426, 657, 1920, 2087
XmnI GAANNNNTTC 2 cut(s) 1289, 1740
XspI CTAG 2 cut(s) 1560, 1701
Zsp2I ATGCAT 1 cut(s) 2089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.