Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0007970

Physical Location & Seq

Genomic Coordinates Forward (+)

1975814 .. 1979057

Gene Structure 3244 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g02700.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2592 bp

ATGGAGTTGAGAAGTTGCAATCATTTGCACTTTATCCAGGCTCTGAAAGGTGGTTTAGTGATCAAGACTCTGAATGTGGCTTGCGGACGACCAGTACTCAGATTCAAGGAGTTGAATGACATACATGAAAGATTAGATGCCAAAAATGGTGTTTCGTTTCCAAGAATTCCACCAAAAGATGAGTTCAGGGGATCGCTTGTCAACAGCAACAAGGCCATGGGTGAAAGTCGAAGCAGGCATACTGTGCGAAATATAACAGTCAAAACTGAACCTGAAGCTTATGGTAGCAGTGATGGCAAAGCCGGAACAAATAGTGATTTGGATGGTTTTGGTGATATGACACTGAAGCAGATCAAAGAGACATGCAAGAAAAAGAAAAGAAAACGTTCAACGTCTGTTGATTTGAACAAAATACTTGAAACTTGCTCACCTGCAAAGCATGAGTGTTCTGAGTCACAAAATGTTGAAGAGGATGTTGATCTCATAGAGCCTATTAGTAAGTGGAAACACTCGAAGAAGGCAAAGGCCAGGACTAAGAGTAAGCTTAAGAGAAACGTTTCCTCTACTATGTCTAAAAGGTCCACATCGACTATCACATCTGAGCCGGAGTTATTCCAATTCGATCGAGATGTGATTGCATCTGGTCTCAACATTAAAGTAGAGGTTCCTGAAACTGAGTTTTCAGATATCCAAAACACAATTCCTTTTGCTGGTGGTACCTCTTTGTCTTGGGACAATCAGGAGGGTTCTTGCGGAGTGGTGCCTGATGAATCTCCTGCGACAGCTGCTAATTGTGTTTACGAGACTGAGTTGCCAATTTCTGAAACTAAAGAAAGTCAGATTTGTGTTGTTAATGAAGTCTTCTATGAAGATTTGGAGTATGCAGTGGGGCCTGATGAATCTCCTGCGACAGCTGCTGATTGTGTTTCCGAGACCGAGTTGCCAACTTCCAAAGCAAAAGAATGTCAGATTTGTGTTATTAATGAAGTCTTCTATGGAGATTTAGAGTATGAAGTGCTGCCTGATGAATCTCCTGCGACAGGTGCTGATTGTGTTTCTGAGACCAAGTTGCCAATTTCCAAAGCAAAAGAAAGTCAGATTTGTGTTGTTAATGAAGTCTTGTATGGAGATTTGGAGTATGAAGTGGTTCCTGATGAATCTCCTGCGGCAGCTGCTGATTGTGTTTCCGAGACCGAGTTGCCAATTACCGAAGCAAAAGAAAGTCAGATTTGTGTTGTTAATGAGGTCTTCTATGAAGATTTGGAGTATGCAGATCCCATGCCTATTCAGATTGTAACGACCTCAGATTGGGATATTGTTGAGGCAGATGATCCAGAGTTCACCAGCTATGACTGCTTGGATTTGCCTCTATTAGAATATAACATGGAAGGATATATCACGGATTCAGTTCTCCCTGACAACTTCATTGAAGTAATATGTCCGGCGCATGATCTAAATTTTTATATGCATGACAATATTTCCTCTGAGGATGAAAGGTTATGTCAGGCTAACAGCGAGACCCAGGTTCGACTATCTGAGGTGGTGGGTGATTATCTCTTCCAGTGCATGGGACCTACTAATGGAAGTGATTCATGTCTGTCTGAGCCTGACATGAAAGACGATTCACCGTCGAATGTTGAAACCAGTGCTGGCCCTGCTAGTGATTGTGATTCGGGCTCTGGTAGCGGTATGGTTTCTGTTGCTGATGATTCTCCCATGGCTGAGGAGGAGAAGCAATCCCACAAGCCTGCCTGTGCTGGTGCAGATAGAAACTTGTCTCGAGGGATCTTTTCTTCTGATGCTTCTGACGAGCTTATGACACTAGTGAGTGGTGGGAGTCCTAGTTTAAACCAGCAGCGTCCTCCTCAAAGGCTCTTTCCGACCAGAAAGGTCATTTCTCCAACTTCCCAAGAAAAACTGTGTAAGGCCATGAAGTCAATTGAGTTACACAGTGAAGAACATCCCGGTTGTAAGGGGAATCTACGTTTTGGAGAACAAACCGAGAGTACGATTGGTGGAGTCCAAGGGCCTGATCAGATCAGGAGAGCCAAATTCTCTATCAAAGCGCAAAACAACCGGAATCCAAAGAACGAGAATATTAATTCCCACCCTAATGGCATCCCTAAACCTTCCAATGTTTCTGCAGCACCACCTCGTTTTACCACAGGGTGTACTTCTATCCGAACTTGTTCAGAAAGCGCCATTGCATTCTCACAACGCCAGATGCAGGACATTGAATCCCTTGCAATAAAACTCACGAATGAGTTACAGACCATGAAGGAAATTGCAGAAGAAGGGTTGCTGCCTGAAGCCTACCATGCTACACCCTTGAAATATAATGCGAATGAGGTGCGGATGGCTATTAAGAACGTAACGAGAGTTGAAGCATCTGCGAAAAGATTGCTTTCCCTGATGACGAGGGACTGTAGCCGGTTTTGTAAAATCATGAAAATGGCTGATAACGGCGTCGATGCTTCTGAAAACGTTGCAAACAAGGACAAGGAGAGGAAGAAAATTGTGTTTGCTGATGAAGCTGGGGGGAAGCTCTGCCATGTCAAGTTTTTTGAGAATGACGTGGCAACATTTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

864

Amino Acids

94.93

Weight (kDa)

4.81

Isoelectric Point (pI)

52.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007970)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56870 AT3G56870
fragaria_vesca	FvH4_2g39990 FvH4_2g39990 FvH4_2g39990 FvH4_2g39990 FvH4_2g39990
malus_domestica	MD08G1033800.v1.1 MD15G1030400.v1.1
prunus_persica	Prupe.1G381200_v2.0.a1
pyrus_communis	pycom08g02700 pycom15g02670
rosa_chinensis	RchiOBHm_Chr6g0300761
rosa_laevigata	RLG00000011304
rosa_multiflora	Rmu_co8197360.1_g000001 Rmu_sc0003626.1_g000001 Rmu_sc0026201.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167440
rosa_rugosa	Rorug06G0298900 Rorug06G0299000
rosa_samantha	Rh6AG411800 Rh6BG419000 Rh6CG426500 Rh6DG411900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	439
Acc36I	ACCTGC	1 cut(s)	439
Acc65I	GGTACC	1 cut(s)	716
AccB1I	GGYRCC	2 cut(s)	716, 760
AccB7I	CCANNNNNTGG	1 cut(s)	1567
AciI	CCGC	5 cut(s)	84, 753, 1166, 1686, 2353
AclI	AACGTT	3 cut(s)	385, 555, 2484
AclWI	GGATC	4 cut(s)	199, 1268, 1325, 1793
AcsI	RAATTY	3 cut(s)	165, 1456, 2051
AcuI	CTGAAG	3 cut(s)	294, 365, 2328
AcyI	GRCGYC	1 cut(s)	2466
AdeI	CACNNNGTG	1 cut(s)	2169
AfaI	GTAC	4 cut(s)	96, 718, 2008, 2173
AfiI	CCNNNNNNNGG	6 cut(s)	710, 1040, 1308, 1567, 1580, 2227
AflII	CTTAAG	1 cut(s)	545
AhlI	ACTAGT	1 cut(s)	1822
AjiI	CACGTC	1 cut(s)	2575
AjnI	CCWGG	3 cut(s)	36, 527, 1521
AjuI	GAANNNNNNNTTGG	2 cut(s)	684, 716
AluBI	AGCT	9 cut(s)	278, 544, 785, 914, 1172, 1347, 1813, 2534, 2545
AluI	AGCT	9 cut(s)	278, 544, 785, 914, 1172, 1347, 1813, 2534, 2545
Alw26I	GTCTC	8 cut(s)	353, 650, 797, 926, 1055, 1184, 1511, 1782
AlwI	GGATC	4 cut(s)	199, 1268, 1325, 1793
AlwNI	CAGNNNCTG	4 cut(s)	43, 917, 1046, 1175
Ama87I	CYCGRG	1 cut(s)	1779
AoxI	GGCC	6 cut(s)	213, 525, 890, 1651, 1926, 2027
ApeKI	GCWGC	8 cut(s)	785, 914, 1018, 1169, 1172, 1855, 2144, 2302
ApoI	RAATTY	3 cut(s)	165, 1456, 2051
AseI	ATTAAT	2 cut(s)	981, 2100
Asp700I	GAANNNNTTC	5 cut(s)	385, 556, 1146, 1588, 2188
Asp718I	GGTACC	1 cut(s)	716
AspLEI	GCGC	3 cut(s)	1447, 2068, 2201
AspS9I	GGNCC	5 cut(s)	579, 890, 1571, 1652, 2027
AsuC2I	CCSGG	1 cut(s)	1965
AsuHPI	GGTGA	6 cut(s)	233, 344, 420, 1333, 1559, 1617
AvaI	CYCGRG	1 cut(s)	1779
AvaII	GGWCC	2 cut(s)	579, 1571
BanI	GGYRCC	2 cut(s)	716, 760
BanII	GRGCYC	1 cut(s)	1679
BarI	GAAGNNNNNNTAC	2 cut(s)	223, 255
BbsI	GAAGAC	3 cut(s)	853, 982, 1240
BbvCI	CCTCAGC	1 cut(s)	1722
BbvI	GCAGC	8 cut(s)	772, 901, 1005, 1159, 1181, 1867, 2156, 2289
BccI	CCATC	3 cut(s)	287, 317, 2350
BceAI	ACGGC	1 cut(s)	2479
BcgI	CGANNNNNNTGC	4 cut(s)	2332, 2366, 2383, 2417
BciT130I	CCWGG	3 cut(s)	38, 529, 1523
BclI	TGATCA	2 cut(s)	60, 2032
BcnI	CCSGG	1 cut(s)	1965
BcoDI	GTCTC	8 cut(s)	353, 650, 797, 926, 1055, 1184, 1511, 1782
BcuI	ACTAGT	1 cut(s)	1822
BfaI	CTAG	3 cut(s)	1659, 1823, 1842
BfmI	CTRYAG	2 cut(s)	2142, 2425
BfoI	RGCGCY	1 cut(s)	2202
BfrI	CTTAAG	1 cut(s)	545
BfuAI	ACCTGC	1 cut(s)	439
BisI	GCNGC	9 cut(s)	786, 915, 1019, 1167, 1170, 1173, 1856, 2145, 2303
BlsI	GCNGC	9 cut(s)	787, 916, 1020, 1168, 1171, 1174, 1857, 2146, 2304
BmcAI	AGTACT	1 cut(s)	96
Bme1390I	CCNGG	4 cut(s)	38, 529, 1523, 1965
Bme18I	GGWCC	2 cut(s)	579, 1571
BmeT110I	CYCGRG	1 cut(s)	1779
BmgBI	CACGTC	1 cut(s)	2575
BmgT120I	GGNCC	5 cut(s)	579, 890, 1571, 1652, 2027
BmiI	GGNNCC	6 cut(s)	666, 718, 762, 891, 1149, 1572
BmrFI	CCNGG	4 cut(s)	38, 529, 1523, 1965
BmsI	GCATC	7 cut(s)	127, 647, 1789, 2127, 2214, 2396, 2461
BpiI	GAAGAC	3 cut(s)	853, 982, 1240
Bpu10I	CCTNAGC	1 cut(s)	1722
BpuMI	CCSGG	1 cut(s)	1965
BsaBI	GATNNNNATC	1 cut(s)	477
BsaHI	GRCGYC	1 cut(s)	2466
BsaI	GGTCTC	5 cut(s)	650, 926, 1055, 1184, 1511
BsaJI	CCNNGG	4 cut(s)	216, 1521, 1716, 2023
BsaWI	WCCGGW	1 cut(s)	2076
BsaXI	ACNNNNNCTCC	2 cut(s)	1828, 1858
Bsc4I	CCNNNNNNNGG	6 cut(s)	710, 1040, 1308, 1567, 1580, 2227
Bse118I	RCCGGY	1 cut(s)	2430
Bse1I	ACTGG	3 cut(s)	92, 1561, 1644
Bse3DI	GCAATG	1 cut(s)	2202
Bse8I	GATNNNNATC	1 cut(s)	477
BseBI	CCWGG	3 cut(s)	38, 529, 1523
BseDI	CCNNGG	4 cut(s)	216, 1521, 1716, 2023
BseGI	GGATG	6 cut(s)	328, 478, 1495, 1960, 2118, 2361
BseJI	GATNNNNATC	1 cut(s)	477
BseLI	CCNNNNNNNGG	6 cut(s)	710, 1040, 1308, 1567, 1580, 2227
BseMI	GCAATG	1 cut(s)	2202
BseNI	ACTGG	3 cut(s)	92, 1561, 1644
BseRI	GAGGAG	3 cut(s)	1739, 1742, 1854
BseXI	GCAGC	8 cut(s)	772, 901, 1005, 1159, 1181, 1867, 2156, 2289
BseYI	CCCAGC	1 cut(s)	2534
BsgI	GTGCAG	1 cut(s)	1782
Bsh1285I	CGRYCG	1 cut(s)	625
BshFI	GGCC	6 cut(s)	215, 527, 892, 1653, 1928, 2029
BshNI	GGYRCC	2 cut(s)	716, 760
BsiEI	CGRYCG	1 cut(s)	625
BsiHKCI	CYCGRG	1 cut(s)	1779
BsiSI	CCGG	6 cut(s)	303, 605, 1442, 1965, 2077, 2431
BslFI	GGGAC	3 cut(s)	746, 1584, 2435
BslI	CCNNNNNNNGG	6 cut(s)	710, 1040, 1308, 1567, 1580, 2227
BsmAI	GTCTC	8 cut(s)	353, 650, 797, 926, 1055, 1184, 1511, 1782
BsmFI	GGGAC	3 cut(s)	746, 1584, 2435
BsmI	GAATGC	1 cut(s)	2207
BsnI	GGCC	6 cut(s)	215, 527, 892, 1653, 1928, 2029
Bso31I	GGTCTC	5 cut(s)	650, 926, 1055, 1184, 1511
BsoBI	CYCGRG	1 cut(s)	1779
Bsp1286I	GDGCHC	1 cut(s)	1679
Bsp19I	CCATGG	2 cut(s)	216, 1716
BspACI	CCGC	5 cut(s)	84, 753, 1166, 1686, 2353
BspANI	GGCC	6 cut(s)	215, 527, 892, 1653, 1928, 2029
BspHI	TCATGA	1 cut(s)	2445
BspLI	GGNNCC	6 cut(s)	666, 718, 762, 891, 1149, 1572
BspMAI	CTGCAG	1 cut(s)	2146
BspMI	ACCTGC	1 cut(s)	439
BspPI	GGATC	4 cut(s)	199, 1268, 1325, 1793
BspT107I	GGYRCC	2 cut(s)	716, 760
BspTI	CTTAAG	1 cut(s)	545
BspTNI	GGTCTC	5 cut(s)	650, 926, 1055, 1184, 1511
BsrDI	GCAATG	1 cut(s)	2202
BsrFI	RCCGGY	1 cut(s)	2430
BsrI	ACTGG	3 cut(s)	92, 1561, 1644
BssAI	RCCGGY	1 cut(s)	2430
BssECI	CCNNGG	4 cut(s)	216, 1521, 1716, 2023
BssNI	GRCGYC	1 cut(s)	2466
BssT1I	CCWWGG	3 cut(s)	216, 1716, 2023
Bst2UI	CCWGG	3 cut(s)	38, 529, 1523
Bst4CI	ACNGT	6 cut(s)	244, 259, 1629, 1920, 1952, 2426
Bst6I	CTCTTC	2 cut(s)	462, 1562
BstACI	GRCGYC	1 cut(s)	2466
BstAFI	CTTAAG	1 cut(s)	545
BstAPI	GCANNNNNTGC	1 cut(s)	244
BstC8I	GCNNGC	4 cut(s)	82, 236, 1651, 1749
BstDSI	CCRYGG	2 cut(s)	216, 1716
BstENI	CCTNNNNNAGG	1 cut(s)	1038
BstF5I	GGATG	6 cut(s)	328, 478, 1495, 1960, 2118, 2361
BstH2I	RGCGCY	1 cut(s)	2202
BstHHI	GCGC	3 cut(s)	1447, 2068, 2201
BstMAI	GTCTC	8 cut(s)	353, 650, 797, 926, 1055, 1184, 1511, 1782
BstMCI	CGRYCG	1 cut(s)	625
BstNI	CCWGG	3 cut(s)	38, 529, 1523
BstNSI	RCATGY	1 cut(s)	366
BstSCI	CCNGG	4 cut(s)	36, 527, 1521, 1963
BstSFI	CTRYAG	2 cut(s)	2142, 2425
BstV1I	GCAGC	8 cut(s)	772, 901, 1005, 1159, 1181, 1867, 2156, 2289
BstV2I	GAAGAC	3 cut(s)	853, 982, 1240
BstX2I	RGATCY	2 cut(s)	1273, 1785
BstXI	CCANNNNNNTGG	1 cut(s)	2114
BstYI	RGATCY	2 cut(s)	1273, 1785
BsuRI	GGCC	6 cut(s)	215, 527, 892, 1653, 1928, 2029
BtgI	CCRYGG	2 cut(s)	216, 1716
BtrI	CACGTC	1 cut(s)	2575
BtsCI	GGATG	6 cut(s)	328, 478, 1495, 1960, 2118, 2361
BtsI	GCAGTG	2 cut(s)	295, 891
BtsIMutI	CAGTG	6 cut(s)	295, 341, 891, 1568, 1651, 1957
BveI	ACCTGC	1 cut(s)	439
Cac8I	GCNNGC	4 cut(s)	82, 236, 1651, 1749
CaiI	CAGNNNCTG	4 cut(s)	43, 917, 1046, 1175
CciI	TCATGA	1 cut(s)	2445
CfoI	GCGC	3 cut(s)	1447, 2068, 2201
Cfr10I	RCCGGY	1 cut(s)	2430
Cfr13I	GGNCC	5 cut(s)	579, 890, 1571, 1652, 2027
CseI	GACGC	2 cut(s)	1847, 2455
Csp6I	GTAC	4 cut(s)	95, 717, 2007, 2172
CviQI	GTAC	4 cut(s)	95, 717, 2007, 2172
DraI	TTTAAA	1 cut(s)	1848
DraIII	CACNNNGTG	1 cut(s)	2169
Eam1104I	CTCTTC	2 cut(s)	462, 1562
EarI	CTCTTC	2 cut(s)	462, 1562
Eco130I	CCWWGG	3 cut(s)	216, 1716, 2023
Eco24I	GRGCYC	1 cut(s)	1679
Eco31I	GGTCTC	5 cut(s)	650, 926, 1055, 1184, 1511
Eco32I	GATATC	1 cut(s)	688
Eco47I	GGWCC	2 cut(s)	579, 1571
Eco57I	CTGAAG	3 cut(s)	294, 365, 2328
Eco88I	CYCGRG	1 cut(s)	1779
EcoNI	CCTNNNNNAGG	1 cut(s)	1038
EcoO109I	RGGNCCY	3 cut(s)	890, 1571, 2027
EcoRI	GAATTC	1 cut(s)	165
EcoRII	CCWGG	3 cut(s)	36, 527, 1521
EcoRV	GATATC	1 cut(s)	688
EcoT14I	CCWWGG	3 cut(s)	216, 1716, 2023
EcoT22I	ATGCAT	1 cut(s)	1470
EcoT38I	GRGCYC	1 cut(s)	1679
ErhI	CCWWGG	3 cut(s)	216, 1716, 2023
FaqI	GGGAC	3 cut(s)	746, 1584, 2435
FbaI	TGATCA	2 cut(s)	60, 2032
Fnu4HI	GCNGC	9 cut(s)	786, 915, 1019, 1167, 1170, 1173, 1856, 2145, 2303
FokI	GGATG	6 cut(s)	335, 485, 1502, 1947, 2105, 2368
FriOI	GRGCYC	1 cut(s)	1679
Fsp4HI	GCNGC	9 cut(s)	786, 915, 1019, 1167, 1170, 1173, 1856, 2145, 2303
FspBI	CTAG	3 cut(s)	1659, 1823, 1842
GlaI	GCGC	3 cut(s)	1446, 2067, 2200
GluI	GCNGC	9 cut(s)	786, 915, 1019, 1167, 1170, 1173, 1856, 2145, 2303
GsaI	CCCAGC	1 cut(s)	2538
HaeII	RGCGCY	1 cut(s)	2202
HaeIII	GGCC	6 cut(s)	215, 527, 892, 1653, 1928, 2029
HapII	CCGG	6 cut(s)	303, 605, 1442, 1965, 2077, 2431
HgaI	GACGC	2 cut(s)	1847, 2455
HhaI	GCGC	3 cut(s)	1447, 2068, 2201
Hin1I	GRCGYC	1 cut(s)	2466
Hin6I	GCGC	3 cut(s)	1445, 2066, 2199
HinP1I	GCGC	3 cut(s)	1445, 2066, 2199
HincII	GTYRAC	1 cut(s)	202
HindII	GTYRAC	1 cut(s)	202
HindIII	AAGCTT	2 cut(s)	276, 542
HpaII	CCGG	6 cut(s)	303, 605, 1442, 1965, 2077, 2431
HphI	GGTGA	6 cut(s)	233, 344, 420, 1333, 1559, 1617
Hpy166II	GTNNAC	5 cut(s)	202, 582, 799, 1341, 2172
Hpy8I	GTNNAC	5 cut(s)	202, 582, 799, 1341, 2172
Hpy99I	CGWCG	2 cut(s)	1633, 2471
HpyAV	CCTTC	5 cut(s)	511, 1382, 2139, 2272, 2288
HpyCH4III	ACNGT	6 cut(s)	244, 259, 1629, 1920, 1952, 2426
HpyCH4IV	ACGT	7 cut(s)	385, 392, 555, 1984, 2370, 2484, 2574
HpySE526I	ACGT	7 cut(s)	385, 392, 555, 1984, 2370, 2484, 2574
Hsp92I	GRCGYC	1 cut(s)	2466
HspAI	GCGC	3 cut(s)	1445, 2066, 2199
KpnI	GGTACC	1 cut(s)	720
Ksp22I	TGATCA	2 cut(s)	60, 2032
Lsp1109I	GCAGC	8 cut(s)	772, 901, 1005, 1159, 1181, 1867, 2156, 2289
LweI	GCATC	7 cut(s)	127, 647, 1789, 2127, 2214, 2396, 2461
MaeI	CTAG	3 cut(s)	1659, 1823, 1842
MaeII	ACGT	7 cut(s)	385, 392, 555, 1984, 2370, 2484, 2574
MaeIII	GTNAC	5 cut(s)	453, 1294, 1944, 2265, 2371
MfeI	CAATTG	1 cut(s)	1938
MflI	RGATCY	2 cut(s)	1273, 1785
MhlI	GDGCHC	1 cut(s)	1679
MlyI	GAGTC	4 cut(s)	61, 461, 1846, 2028
MmeI	TCCRAC	2 cut(s)	1904, 1925
Mph1103I	ATGCAT	1 cut(s)	1470
MroXI	GAANNNNTTC	5 cut(s)	385, 556, 1146, 1588, 2188
MseI	TTAA	9 cut(s)	546, 654, 852, 981, 1110, 1239, 1847, 2100, 2364
MslI	CAYNNNNRTG	3 cut(s)	2112, 2450, 2587
MspA1I	CMGCKG	3 cut(s)	785, 914, 1172
MspCI	CTTAAG	1 cut(s)	545
MspI	CCGG	6 cut(s)	303, 605, 1442, 1965, 2077, 2431
MspR9I	CCNGG	4 cut(s)	38, 529, 1523, 1965
MssI	GTTTAAAC	1 cut(s)	1848
MunI	CAATTG	1 cut(s)	1938
Mva1269I	GAATGC	1 cut(s)	2207
MvaI	CCWGG	3 cut(s)	38, 529, 1523
NciI	CCSGG	1 cut(s)	1965
NcoI	CCATGG	2 cut(s)	216, 1716
NlaIV	GGNNCC	6 cut(s)	666, 718, 762, 891, 1149, 1572
NmuCI	GTSAC	1 cut(s)	453
NsiI	ATGCAT	1 cut(s)	1470
NspI	RCATGY	1 cut(s)	366
PaeR7I	CTCGAG	1 cut(s)	1779
PagI	TCATGA	1 cut(s)	2445
PaqCI	CACCTGC	1 cut(s)	439
PctI	GAATGC	1 cut(s)	2207
PdmI	GAANNNNTTC	5 cut(s)	385, 556, 1146, 1588, 2188
PflMI	CCANNNNNTGG	1 cut(s)	1567
PkrI	GCNGC	9 cut(s)	787, 916, 1020, 1168, 1171, 1174, 1857, 2146, 2304
Ple19I	CGATCG	1 cut(s)	625
PleI	GAGTC	4 cut(s)	61, 460, 1845, 2027
PmeI	GTTTAAAC	1 cut(s)	1848
PpsI	GAGTC	4 cut(s)	61, 460, 1845, 2027
PpuMI	RGGWCCY	1 cut(s)	1571
PshBI	ATTAAT	2 cut(s)	981, 2100
Psp1406I	AACGTT	3 cut(s)	385, 555, 2484
Psp5II	RGGWCCY	1 cut(s)	1571
Psp6I	CCWGG	3 cut(s)	36, 527, 1521
PspFI	CCCAGC	1 cut(s)	2534
PspGI	CCWGG	3 cut(s)	36, 527, 1521
PspN4I	GGNNCC	6 cut(s)	666, 718, 762, 891, 1149, 1572
PspPI	GGNCC	5 cut(s)	579, 890, 1571, 1652, 2027
PspPPI	RGGWCCY	1 cut(s)	1571
PstI	CTGCAG	1 cut(s)	2146
PstNI	CAGNNNCTG	4 cut(s)	43, 917, 1046, 1175
PsuI	RGATCY	2 cut(s)	1273, 1785
PvuI	CGATCG	1 cut(s)	625
PvuII	CAGCTG	3 cut(s)	785, 914, 1172
RsaI	GTAC	4 cut(s)	96, 718, 2008, 2173
RsaNI	GTAC	4 cut(s)	95, 717, 2007, 2172
RseI	CAYNNNNRTG	3 cut(s)	2112, 2450, 2587
SaqAI	TTAA	9 cut(s)	546, 654, 852, 981, 1110, 1239, 1847, 2100, 2364
SatI	GCNGC	9 cut(s)	786, 915, 1019, 1167, 1170, 1173, 1856, 2145, 2303
Sau96I	GGNCC	5 cut(s)	579, 890, 1571, 1652, 2027
ScaI	AGTACT	1 cut(s)	96
SchI	GAGTC	4 cut(s)	61, 461, 1846, 2028
ScrFI	CCNGG	4 cut(s)	38, 529, 1523, 1965
SduI	GDGCHC	1 cut(s)	1679
SfaNI	GCATC	7 cut(s)	127, 647, 1789, 2127, 2214, 2396, 2461
SfcI	CTRYAG	2 cut(s)	2142, 2425
Sfr274I	CTCGAG	1 cut(s)	1779
SinI	GGWCC	2 cut(s)	579, 1571
SlaI	CTCGAG	1 cut(s)	1779
SmiMI	CAYNNNNRTG	3 cut(s)	2112, 2450, 2587
SmlI	CTYRAG	2 cut(s)	545, 1779
SmoI	CTYRAG	2 cut(s)	545, 1779
SpeI	ACTAGT	1 cut(s)	1822
SsiI	CCGC	5 cut(s)	84, 753, 1166, 1686, 2353
SspI	AATATT	2 cut(s)	1477, 2098
SspMI	CTAG	3 cut(s)	1659, 1823, 1842
StyD4I	CCNGG	4 cut(s)	36, 527, 1521, 1963
StyI	CCWWGG	3 cut(s)	216, 1716, 2023
TaaI	ACNGT	6 cut(s)	244, 259, 1629, 1920, 1952, 2426
TaiI	ACGT	7 cut(s)	388, 395, 558, 1987, 2373, 2487, 2577
TaqI	TCGA	9 cut(s)	229, 512, 587, 621, 625, 1528, 1631, 1780, 2469
TaqII	GACCGA	2 cut(s)	950, 1208
TatI	WGTACW	2 cut(s)	94, 2171
TauI	GCSGC	1 cut(s)	1169
Tru1I	TTAA	9 cut(s)	546, 654, 852, 981, 1110, 1239, 1847, 2100, 2364
Tru9I	TTAA	9 cut(s)	546, 654, 852, 981, 1110, 1239, 1847, 2100, 2364
TscAI	CASTG	6 cut(s)	295, 348, 891, 1568, 1651, 1957
TseFI	GTSAC	1 cut(s)	453
TseI	GCWGC	8 cut(s)	785, 914, 1018, 1169, 1172, 1855, 2144, 2302
Tsp45I	GTSAC	1 cut(s)	453
TspGWI	ACGGA	1 cut(s)	1415
TspRI	CASTG	6 cut(s)	295, 348, 891, 1568, 1651, 1957
Van91I	CCANNNNNTGG	1 cut(s)	1567
Vha464I	CTTAAG	1 cut(s)	545
VpaK11BI	GGWCC	2 cut(s)	579, 1571
VspI	ATTAAT	2 cut(s)	981, 2100
XagI	CCTNNNNNAGG	1 cut(s)	1038
XapI	RAATTY	3 cut(s)	165, 1456, 2051
XceI	RCATGY	1 cut(s)	366
XhoI	CTCGAG	1 cut(s)	1779
XmnI	GAANNNNTTC	5 cut(s)	385, 556, 1146, 1588, 2188
XspI	CTAG	3 cut(s)	1659, 1823, 1842
ZrmI	AGTACT	1 cut(s)	96
Zsp2I	ATGCAT	1 cut(s)	1470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.