Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0012573

Physical Location & Seq

Genomic Coordinates Reverse (-)

2418718 .. 2423142

Gene Structure 4425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g03060.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGAGTTATTTCACCCTAATTTTATCCGTACTTGTTTTTCCACTACTCACCATCCATGCATCAAATGATTCAAATCACTGCAACCAATCGTGCCCGAGTTTCGGTCCCAGCCCGATTCAGTACCCTTTCGGGTTCTCATCGGGCTGCGAAATCCAGCTTAACTGCCCCGGATTCGCAATCGGGGAGTTTCCAATCCAGTCCATAACGCAGGACAGCATAAGAATCAACCTCCGGAGCCGTTGCAACCGCCCCCTCCACACCCTTCGCCACCTGTACAGCCGGAACTACGCCCCGACGTCACGAAACGCGATTCTTTTACGGAACTGTATGGCCGGTAGGCCGTCCAGCAGCTGCGAGATTCCCAACATTCGGGTGCAGGCGCGGTTCGACGCTCCACCCAACTGCAACGCCAACGGCAGCCTCAGCTGCTACGCCGAGACCAGAAAGGATGTCCGATTTCTGGACTTTGGGAGCGTCAAGCGGAAGGACTGCAAGTTCTTGCTGTCGGCGATTTCGGCGCCGTCGCCGCAACTTTTGAATAGCTCAGCGCCGCTGTTGCTGGAGGTGGAAGTGGTGGAGTTAGGGTGGTGGCTTGAGGGAACTTGCGGGTGTGATAAGAACGCCAATTGTACGACGGTCGTATCGCCAAATGGGACAGAAGGGTATAGATGCAACTGCAAGGAGGGGTTTGGTGGAGATGGATACGTTGCTGGGTTAGGCTGCAGGAAAGTCTCATCGACTTGCAACCCTGCAAAATACTTGTCTGGAGAATGTGGAGGAAAGGCCAGGTTCATCGTTTTGATTGGAGCTGTGTTTGTTGGAGCTTCTTTAATGATCAGTCTGGCTCTGATATGCTGCTTCATCCGGCGGCAATCCAAGCTGAAAGCGAGACACTCCACCAAACGCCTTCTATCCGAAGCTACTGGCAACTGCGACATTCCCTTCTACTCCTACAAACAAATCGAAAAGGCCACGAATAGCTTCTCAGACAAGCAAAGGCTGGGAACCGGAGCTTATGGAACAGTTTACGCAGGAAAACTCCACGATGAATGGGTTGCCATAAAGAGAATTAAACACAGAGGACATGAAAGCATTGACCAAGTCATGAACGAGATCAAGCTCATTTCATCGGTAAGGCACCCGAATTTAGTCCGGTTATTAGGTTGCTCCATTGAACGCGGTGAGCAGATTCTTGTGTACGAGTTCATGGGGAATGGGACATTGTGTCAGCATTTGCAAGGAGAGAGAGGGGAAGGACTTTCTTGGCTCACACGCCTGACCATTGCCGCTGAAACTGCGAAAGCAATATCCCATCTCCACTCGGCTGTTAAGCCTCCCATATACCACAGAGACATCAAGTCGAGCAACATTCTTCTGGATTGCAAGTTCAAATCCAAAGTCGCGGATTTTGGCCTTTCGAGGCTTGGGATGGCGGAAACCTCCCACATTTCAACGGCTCCACAGGGGACTCCGGGTTATCTTGATCCTCAGTACCATCAGAACTTCCATCTCTCCGATAAAAGCGATGTCTATAGTTTCGGTGTGGTGCTTGTCGAGATAATAACAGGGTTAAAAGCGGTAGATTTTACCCGCCCCCAGAATGAAGTGAACTTGGCAGCTCTAGCCACTGACAGAATAGGAAGGGGGTGTCTAAATGAGATCATAGACCCTTTTCTCGAGCCCCTTTTGGATGACGCTTGGACTCTTTCGTCAGTTCATAAGGTCGCCGAATTGGCATTCAGATGCCTTGCATTTCAACGAGACATGAGACCAACTATGATAGAAGTGACAGCCGAGTTGGAGCTCATCAAGCTAAGTAAATGGCCATCTTCAGAAGAAAACACATACACAGCTTCATCAGACGGATCCTCTTGCTGTTCTTCATCTAGCGTGAGCGAAAAGCCTCTAAATATTACCAAATCCCGATCACTGAGAAGCGTCAATGCACTGCAGAGTGGAGATGCCAGTAGCTTCAATTCGAGCAAAAAATTCAAGGATAATTCATCGGTCTCTGTTCAAGATACGTGGTTAAGCGATCAGAGCTCGCCTTCATCAAACAGTTTGCTGAGTAATGTAATTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

695

Amino Acids

76.19

Weight (kDa)

8.6

Isoelectric Point (pI)

46.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012573)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g03470 FvH4_2g40520 FvH4_2g40520
malus_domestica	MD00G1038300.v1.1 MD08G1038900.v1.1 MD16G1038500.v1.1
prunus_persica	Prupe.1G386400_v2.0.a1
pyrus_communis	pycom08g03060
rosa_chinensis	RchiOBHm_Chr6g0300211
rosa_laevigata	RLG00000011357
rosa_multiflora	Rmu_sc0001670.1_g000034
rosa_roxburghii	Rroxscaffold_7G00168010
rosa_rugosa	Rorug05G0186800 Rorug06G0294100
rosa_samantha	Rh6AG406300 Rh6BG414200 Rh6CG421400 Rh6DG407000
rosa_wichuraiana	Rw6G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1708
AatII	GACGTC	1 cut(s)	299
AccB1I	GGYRCC	2 cut(s)	517, 1137
AccII	CGCG	4 cut(s)	308, 382, 1179, 1403
AccIII	TCCGGA	1 cut(s)	231
AclWI	GGATC	3 cut(s)	1478, 1860, 1873
AcoI	YGGCCR	2 cut(s)	330, 1823
AcsI	RAATTY	2 cut(s)	1144, 1988
AcuI	CTGAAG	1 cut(s)	1815
AcyI	GRCGYC	2 cut(s)	296, 518
AfaI	GTAC	6 cut(s)	30, 122, 275, 631, 1199, 1493
AfiI	CCNNNNNNNGG	3 cut(s)	101, 369, 460
AgsI	TTSAA	9 cut(s)	72, 538, 1175, 1390, 1452, 1757, 1975, 1993, 2018
AhdI	GACNNNNNGTC	2 cut(s)	1224, 1357
AjnI	CCWGG	1 cut(s)	785
AloI	GAACNNNNNNTCC	4 cut(s)	479, 511, 1370, 1402
Alw21I	GWGCWC	2 cut(s)	1806, 2045
Alw26I	GTCTC	7 cut(s)	431, 736, 883, 1344, 1755, 1762, 2014
AlwI	GGATC	3 cut(s)	1478, 1860, 1873
AlwNI	CAGNNNCTG	1 cut(s)	351
Ama87I	CYCGRG	2 cut(s)	94, 1676
Aor13HI	TCCGGA	1 cut(s)	231
AoxI	GGCC	6 cut(s)	330, 338, 783, 969, 1411, 1823
ApeKI	GCWGC	8 cut(s)	144, 348, 351, 417, 426, 720, 855, 1616
ApoI	RAATTY	2 cut(s)	1144, 1988
ArsI	GACNNNNNNTTYG	4 cut(s)	746, 778, 1383, 1415
Asp700I	GAANNNNTTC	1 cut(s)	980
AspLEI	GCGC	3 cut(s)	382, 520, 550
AspS9I	GGNCC	1 cut(s)	104
AsuC2I	CCSGG	2 cut(s)	168, 1473
AsuHPI	GGTGA	3 cut(s)	4, 40, 1193
AvaI	CYCGRG	2 cut(s)	94, 1676
AvaII	GGWCC	1 cut(s)	104
BaeGI	GKGCMC	1 cut(s)	95
BaeI	ACNNNNGTAYC	2 cut(s)	624, 657
BalI	TGGCCA	1 cut(s)	1825
BamHI	GGATCC	1 cut(s)	1865
BanI	GGYRCC	2 cut(s)	517, 1137
BanII	GRGCYC	3 cut(s)	1683, 1806, 2045
Bbv12I	GWGCWC	2 cut(s)	1806, 2045
BbvCI	CCTCAGC	1 cut(s)	422
BbvI	GCAGC	8 cut(s)	131, 338, 360, 413, 429, 707, 842, 1628
BccI	CCATC	7 cut(s)	59, 692, 1320, 1423, 1503, 1515, 1834
BceAI	ACGGC	5 cut(s)	222, 325, 430, 505, 1470
BciT130I	CCWGG	1 cut(s)	787
BciVI	GTATCC	1 cut(s)	695
BclI	TGATCA	1 cut(s)	834
BcnI	CCSGG	2 cut(s)	168, 1473
BcoDI	GTCTC	7 cut(s)	431, 736, 883, 1344, 1755, 1762, 2014
BfaI	CTAG	2 cut(s)	1622, 1887
BfmI	CTRYAG	3 cut(s)	721, 1531, 1949
BfoI	RGCGCY	2 cut(s)	521, 551
BfuI	GTATCC	1 cut(s)	695
BglI	GCCNNNNNGGC	1 cut(s)	1733
BlpI	GCTNAGC	1 cut(s)	544
Bme1390I	CCNGG	3 cut(s)	168, 787, 1473
Bme18I	GGWCC	1 cut(s)	104
BmeRI	GACNNNNNGTC	2 cut(s)	1224, 1357
BmeT110I	CYCGRG	2 cut(s)	94, 1676
BmgT120I	GGNCC	1 cut(s)	104
BmiI	GGNNCC	7 cut(s)	106, 236, 519, 1006, 1139, 1458, 1867
BmrFI	CCNGG	3 cut(s)	168, 787, 1473
BmsI	GCATC	4 cut(s)	68, 659, 1733, 1951
BpmI	CTGGAG	2 cut(s)	581, 786
Bpu10I	CCTNAGC	1 cut(s)	422
Bpu1102I	GCTNAGC	1 cut(s)	544
BpuEI	CTTGAG	1 cut(s)	614
BpuMI	CCSGG	2 cut(s)	168, 1473
BsaAI	YACGTR	1 cut(s)	2025
BsaBI	GATNNNNATC	1 cut(s)	72
BsaHI	GRCGYC	2 cut(s)	296, 518
BsaI	GGTCTC	3 cut(s)	431, 1762, 2014
BsaJI	CCNNGG	1 cut(s)	166
BsaWI	WCCGGW	3 cut(s)	231, 1007, 1152
BsaXI	ACNNNNNCTCC	2 cut(s)	569, 599
Bsc4I	CCNNNNNNNGG	3 cut(s)	101, 369, 460
Bse118I	RCCGGY	1 cut(s)	332
Bse1I	ACTGG	3 cut(s)	196, 928, 1965
Bse3DI	GCAATG	1 cut(s)	1281
Bse8I	GATNNNNATC	1 cut(s)	72
BseAI	TCCGGA	1 cut(s)	231
BseBI	CCWGG	1 cut(s)	787
BseDI	CCNNGG	1 cut(s)	166
BseGI	GGATG	5 cut(s)	51, 454, 861, 1434, 1696
BseJI	GATNNNNATC	1 cut(s)	72
BseLI	CCNNNNNNNGG	3 cut(s)	101, 369, 460
BseMI	GCAATG	1 cut(s)	1281
BseMII	CTCAG	6 cut(s)	436, 558, 999, 1502, 1922, 2057
BseNI	ACTGG	3 cut(s)	196, 928, 1965
BseSI	GKGCMC	1 cut(s)	95
BseXI	GCAGC	8 cut(s)	131, 338, 360, 413, 429, 707, 842, 1628
BseYI	CCCAGC	3 cut(s)	107, 710, 1000
BsgI	GTGCAG	1 cut(s)	395
Bsh1236I	CGCG	4 cut(s)	308, 382, 1179, 1403
Bsh1285I	CGRYCG	1 cut(s)	639
BshFI	GGCC	6 cut(s)	332, 340, 785, 971, 1413, 1825
BshNI	GGYRCC	2 cut(s)	517, 1137
BsiEI	CGRYCG	1 cut(s)	639
BsiHKAI	GWGCWC	2 cut(s)	1806, 2045
BsiHKCI	CYCGRG	2 cut(s)	94, 1676
BsiSI	CCGG	8 cut(s)	168, 232, 280, 333, 865, 1008, 1153, 1472
BslFI	GGGAC	4 cut(s)	90, 667, 1231, 1480
BslI	CCNNNNNNNGG	3 cut(s)	101, 369, 460
BsmAI	GTCTC	7 cut(s)	431, 736, 883, 1344, 1755, 1762, 2014
BsmFI	GGGAC	4 cut(s)	90, 667, 1231, 1480
BsmI	GAATGC	1 cut(s)	1736
BsnI	GGCC	6 cut(s)	332, 340, 785, 971, 1413, 1825
Bso31I	GGTCTC	3 cut(s)	431, 1762, 2014
BsoBI	CYCGRG	2 cut(s)	94, 1676
Bsp1286I	GDGCHC	4 cut(s)	95, 1683, 1806, 2045
Bsp13I	TCCGGA	1 cut(s)	231
Bsp1407I	TGTACA	1 cut(s)	273
Bsp143I	GATC	7 cut(s)	834, 1113, 1483, 1659, 1865, 1925, 2035
Bsp1720I	GCTNAGC	1 cut(s)	544
BspANI	GGCC	6 cut(s)	332, 340, 785, 971, 1413, 1825
BspCNI	CTCAG	6 cut(s)	435, 557, 998, 1501, 1923, 2058
BspEI	TCCGGA	1 cut(s)	231
BspFNI	CGCG	4 cut(s)	308, 382, 1179, 1403
BspHI	TCATGA	1 cut(s)	1104
BspLI	GGNNCC	7 cut(s)	106, 236, 519, 1006, 1139, 1458, 1867
BspMAI	CTGCAG	2 cut(s)	725, 1953
BspPI	GGATC	3 cut(s)	1478, 1860, 1873
BspT107I	GGYRCC	2 cut(s)	517, 1137
BspTNI	GGTCTC	3 cut(s)	431, 1762, 2014
BsrDI	GCAATG	1 cut(s)	1281
BsrFI	RCCGGY	1 cut(s)	332
BsrGI	TGTACA	1 cut(s)	273
BsrI	ACTGG	3 cut(s)	196, 928, 1965
BssAI	RCCGGY	1 cut(s)	332
BssECI	CCNNGG	1 cut(s)	166
BssMI	GATC	7 cut(s)	834, 1113, 1483, 1659, 1865, 1925, 2035
BssNI	GRCGYC	2 cut(s)	296, 518
Bst2UI	CCWGG	1 cut(s)	787
Bst4CI	ACNGT	4 cut(s)	326, 637, 1024, 2060
BstACI	GRCGYC	2 cut(s)	296, 518
BstAUI	TGTACA	1 cut(s)	273
BstBAI	YACGTR	1 cut(s)	2025
BstC8I	GCNNGC	2 cut(s)	378, 2045
BstDEI	CTNAG	7 cut(s)	422, 544, 985, 1488, 1814, 1931, 2066
BstF5I	GGATG	5 cut(s)	51, 454, 861, 1434, 1696
BstFNI	CGCG	4 cut(s)	308, 382, 1179, 1403
BstH2I	RGCGCY	2 cut(s)	521, 551
BstHHI	GCGC	3 cut(s)	382, 520, 550
BstKTI	GATC	7 cut(s)	837, 1116, 1486, 1662, 1868, 1928, 2038
BstMAI	GTCTC	7 cut(s)	431, 736, 883, 1344, 1755, 1762, 2014
BstMBI	GATC	7 cut(s)	834, 1113, 1483, 1659, 1865, 1925, 2035
BstMCI	CGRYCG	1 cut(s)	639
BstNI	CCWGG	1 cut(s)	787
BstSCI	CCNGG	3 cut(s)	166, 785, 1471
BstSFI	CTRYAG	3 cut(s)	721, 1531, 1949
BstSLI	GKGCMC	1 cut(s)	95
BstUI	CGCG	4 cut(s)	308, 382, 1179, 1403
BstV1I	GCAGC	8 cut(s)	131, 338, 360, 413, 429, 707, 842, 1628
BstX2I	RGATCY	1 cut(s)	1865
BstYI	RGATCY	1 cut(s)	1865
BsuI	GTATCC	1 cut(s)	695
BsuRI	GGCC	6 cut(s)	332, 340, 785, 971, 1413, 1825
BtgZI	GCGATG	1 cut(s)	1539
BtsCI	GGATG	5 cut(s)	51, 454, 861, 1434, 1696
BtsI	GCAGTG	2 cut(s)	76, 1946
BtsIMutI	CAGTG	4 cut(s)	76, 1626, 1928, 1946
Cac8I	GCNNGC	2 cut(s)	378, 2045
CaiI	CAGNNNCTG	1 cut(s)	351
CciI	TCATGA	1 cut(s)	1104
CfoI	GCGC	3 cut(s)	382, 520, 550
Cfr10I	RCCGGY	1 cut(s)	332
Cfr13I	GGNCC	1 cut(s)	104
CseI	GACGC	4 cut(s)	398, 463, 1703, 1927
Csp6I	GTAC	6 cut(s)	29, 121, 274, 630, 1198, 1492
CspCI	CAANNNNNGTGG	2 cut(s)	2006, 2041
CviAII	CATG	5 cut(s)	56, 1085, 1105, 1207, 1765
CviQI	GTAC	6 cut(s)	29, 121, 274, 630, 1198, 1492
DdeI	CTNAG	7 cut(s)	422, 544, 985, 1488, 1814, 1931, 2066
DinI	GGCGCC	1 cut(s)	519
DpnI	GATC	7 cut(s)	836, 1115, 1485, 1661, 1867, 1927, 2037
DpnII	GATC	7 cut(s)	834, 1113, 1483, 1659, 1865, 1925, 2035
DrdI	GACNNNNNNGTC	1 cut(s)	1708
DriI	GACNNNNNGTC	2 cut(s)	1224, 1357
DseDI	GACNNNNNNGTC	1 cut(s)	1708
EaeI	YGGCCR	2 cut(s)	330, 1823
Eam1105I	GACNNNNNGTC	2 cut(s)	1224, 1357
EciI	GGCGGA	1 cut(s)	1448
Ecl136II	GAGCTC	2 cut(s)	1804, 2043
Eco24I	GRGCYC	3 cut(s)	1683, 1806, 2045
Eco31I	GGTCTC	3 cut(s)	431, 1762, 2014
Eco47I	GGWCC	1 cut(s)	104
Eco53kI	GAGCTC	2 cut(s)	1804, 2043
Eco57I	CTGAAG	1 cut(s)	1815
Eco88I	CYCGRG	2 cut(s)	94, 1676
EcoICRI	GAGCTC	2 cut(s)	1804, 2043
EcoRII	CCWGG	1 cut(s)	785
EcoT22I	ATGCAT	1 cut(s)	61
EcoT38I	GRGCYC	3 cut(s)	1683, 1806, 2045
EgeI	GGCGCC	1 cut(s)	519
EheI	GGCGCC	1 cut(s)	519
FaeI	CATG	5 cut(s)	59, 1088, 1108, 1210, 1768
FaqI	GGGAC	4 cut(s)	90, 667, 1231, 1480
FatI	CATG	5 cut(s)	55, 1084, 1104, 1206, 1764
FauI	CCCGC	2 cut(s)	599, 1598
FbaI	TGATCA	1 cut(s)	834
FokI	GGATG	5 cut(s)	38, 461, 848, 1441, 1703
FriOI	GRGCYC	3 cut(s)	1683, 1806, 2045
FspBI	CTAG	2 cut(s)	1622, 1887
GlaI	GCGC	3 cut(s)	381, 519, 549
GsaI	CCCAGC	3 cut(s)	111, 714, 1004
GsuI	CTGGAG	2 cut(s)	581, 786
HaeII	RGCGCY	2 cut(s)	521, 551
HaeIII	GGCC	6 cut(s)	332, 340, 785, 971, 1413, 1825
HapII	CCGG	8 cut(s)	168, 232, 280, 333, 865, 1008, 1153, 1472
HgaI	GACGC	4 cut(s)	398, 463, 1703, 1927
HhaI	GCGC	3 cut(s)	382, 520, 550
Hin1I	GRCGYC	2 cut(s)	296, 518
Hin1II	CATG	5 cut(s)	59, 1088, 1108, 1210, 1768
Hin6I	GCGC	3 cut(s)	380, 518, 548
HinP1I	GCGC	3 cut(s)	380, 518, 548
HinfI	GANTC	9 cut(s)	68, 115, 171, 222, 310, 358, 1189, 1468, 1702
HpaII	CCGG	8 cut(s)	168, 232, 280, 333, 865, 1008, 1153, 1472
HphI	GGTGA	3 cut(s)	4, 40, 1193
Hpy166II	GTNNAC	3 cut(s)	1027, 1198, 1609
Hpy8I	GTNNAC	3 cut(s)	1027, 1198, 1609
Hpy99I	CGWCG	4 cut(s)	298, 392, 526, 637
HpyAV	CCTTC	8 cut(s)	272, 478, 653, 917, 952, 1247, 1635, 2058
HpyCH4III	ACNGT	4 cut(s)	326, 637, 1024, 2060
HpyCH4IV	ACGT	3 cut(s)	296, 705, 2024
HpyF3I	CTNAG	7 cut(s)	422, 544, 985, 1488, 1814, 1931, 2066
HpySE526I	ACGT	3 cut(s)	296, 705, 2024
Hsp92I	GRCGYC	2 cut(s)	296, 518
Hsp92II	CATG	5 cut(s)	59, 1088, 1108, 1210, 1768
HspAI	GCGC	3 cut(s)	380, 518, 548
KasI	GGCGCC	1 cut(s)	517
Kpn2I	TCCGGA	1 cut(s)	231
Ksp22I	TGATCA	1 cut(s)	834
Kzo9I	GATC	7 cut(s)	834, 1113, 1483, 1659, 1865, 1925, 2035
LmnI	GCTCC	9 cut(s)	234, 397, 471, 806, 821, 1010, 1172, 1462, 1801
Lsp1109I	GCAGC	8 cut(s)	131, 338, 360, 413, 429, 707, 842, 1628
LweI	GCATC	4 cut(s)	68, 659, 1733, 1951
MaeI	CTAG	2 cut(s)	1622, 1887
MaeII	ACGT	3 cut(s)	296, 705, 2024
MaeIII	GTNAC	2 cut(s)	297, 1786
MalI	GATC	7 cut(s)	836, 1115, 1485, 1661, 1867, 1927, 2037
MboI	GATC	7 cut(s)	834, 1113, 1483, 1659, 1865, 1925, 2035
MboII	GAAGA	4 cut(s)	1364, 1821, 1847, 1872
MfeI	CAATTG	1 cut(s)	625
MflI	RGATCY	1 cut(s)	1865
MhlI	GDGCHC	4 cut(s)	95, 1683, 1806, 2045
MlsI	TGGCCA	1 cut(s)	1825
MluCI	AATT	9 cut(s)	18, 625, 1068, 1144, 1730, 1975, 1988, 1999, 2076
MluNI	TGGCCA	1 cut(s)	1825
Mly113I	GGCGCC	1 cut(s)	518
MlyI	GAGTC	2 cut(s)	1462, 1696
MmeI	TCCRAC	2 cut(s)	799, 1779
Mox20I	TGGCCA	1 cut(s)	1825
Mph1103I	ATGCAT	1 cut(s)	61
MroI	TCCGGA	1 cut(s)	231
MroXI	GAANNNNTTC	1 cut(s)	980
MscI	TGGCCA	1 cut(s)	1825
MseI	TTAA	6 cut(s)	159, 830, 1071, 1329, 1571, 2030
MslI	CAYNNNNRTG	2 cut(s)	371, 1741
Msp20I	TGGCCA	1 cut(s)	1825
MspA1I	CMGCKG	4 cut(s)	351, 426, 553, 1289
MspI	CCGG	8 cut(s)	168, 232, 280, 333, 865, 1008, 1153, 1472
MspR9I	CCNGG	3 cut(s)	168, 787, 1473
MunI	CAATTG	1 cut(s)	625
Mva1269I	GAATGC	1 cut(s)	1736
MvaI	CCWGG	1 cut(s)	787
MvnI	CGCG	4 cut(s)	308, 382, 1179, 1403
NarI	GGCGCC	1 cut(s)	518
NciI	CCSGG	2 cut(s)	168, 1473
NdeII	GATC	7 cut(s)	834, 1113, 1483, 1659, 1865, 1925, 2035
NlaIII	CATG	5 cut(s)	59, 1088, 1108, 1210, 1768
NlaIV	GGNNCC	7 cut(s)	106, 236, 519, 1006, 1139, 1458, 1867
NmeAIII	GCCGAG	3 cut(s)	460, 1301, 1819
NmuCI	GTSAC	2 cut(s)	297, 1786
NsiI	ATGCAT	1 cut(s)	61
PaeR7I	CTCGAG	1 cut(s)	1676
PagI	TCATGA	1 cut(s)	1104
PctI	GAATGC	1 cut(s)	1736
PdmI	GAANNNNTTC	1 cut(s)	980
PfeI	GAWTC	7 cut(s)	68, 115, 171, 222, 310, 358, 1189
PflFI	GACNNNGTC	1 cut(s)	1100
PleI	GAGTC	2 cut(s)	1462, 1696
PluTI	GGCGCC	1 cut(s)	521
PpsI	GAGTC	2 cut(s)	1462, 1696
Ppu21I	YACGTR	1 cut(s)	2025
Psp124BI	GAGCTC	2 cut(s)	1806, 2045
Psp6I	CCWGG	1 cut(s)	785
PspFI	CCCAGC	3 cut(s)	107, 710, 1000
PspGI	CCWGG	1 cut(s)	785
PspN4I	GGNNCC	7 cut(s)	106, 236, 519, 1006, 1139, 1458, 1867
PspPI	GGNCC	1 cut(s)	104
PstI	CTGCAG	2 cut(s)	725, 1953
PstNI	CAGNNNCTG	1 cut(s)	351
PsuI	RGATCY	1 cut(s)	1865
PsyI	GACNNNGTC	1 cut(s)	1100
PvuII	CAGCTG	2 cut(s)	351, 426
RsaI	GTAC	6 cut(s)	30, 122, 275, 631, 1199, 1493
RsaNI	GTAC	6 cut(s)	29, 121, 274, 630, 1198, 1492
RseI	CAYNNNNRTG	2 cut(s)	371, 1741
SacI	GAGCTC	2 cut(s)	1806, 2045
SaqAI	TTAA	6 cut(s)	159, 830, 1071, 1329, 1571, 2030
Sau3AI	GATC	7 cut(s)	834, 1113, 1483, 1659, 1865, 1925, 2035
Sau96I	GGNCC	1 cut(s)	104
SchI	GAGTC	2 cut(s)	1462, 1696
ScrFI	CCNGG	3 cut(s)	168, 787, 1473
SduI	GDGCHC	4 cut(s)	95, 1683, 1806, 2045
SfaNI	GCATC	4 cut(s)	68, 659, 1733, 1951
SfcI	CTRYAG	3 cut(s)	721, 1531, 1949
SfoI	GGCGCC	1 cut(s)	519
Sfr274I	CTCGAG	1 cut(s)	1676
SinI	GGWCC	1 cut(s)	104
SlaI	CTCGAG	1 cut(s)	1676
SmiMI	CAYNNNNRTG	2 cut(s)	371, 1741
SmlI	CTYRAG	2 cut(s)	593, 1676
SmoI	CTYRAG	2 cut(s)	593, 1676
Sse9I	AATT	9 cut(s)	18, 625, 1068, 1144, 1730, 1975, 1988, 1999, 2076
SspDI	GGCGCC	1 cut(s)	517
SspI	AATATT	1 cut(s)	1912
SspMI	CTAG	2 cut(s)	1622, 1887
SstI	GAGCTC	2 cut(s)	1806, 2045
StyD4I	CCNGG	3 cut(s)	166, 785, 1471
TaaI	ACNGT	4 cut(s)	326, 637, 1024, 2060
TaiI	ACGT	3 cut(s)	299, 708, 2027
TaqI	TCGA	8 cut(s)	387, 737, 963, 1361, 1418, 1554, 1677, 1979
TaqII	GACCGA	2 cut(s)	92, 1996
TasI	AATT	9 cut(s)	18, 625, 1068, 1144, 1730, 1975, 1988, 1999, 2076
TatI	WGTACW	1 cut(s)	273
TauI	GCSGC	4 cut(s)	529, 553, 871, 1289
TfiI	GAWTC	7 cut(s)	68, 115, 171, 222, 310, 358, 1189
Tru1I	TTAA	6 cut(s)	159, 830, 1071, 1329, 1571, 2030
Tru9I	TTAA	6 cut(s)	159, 830, 1071, 1329, 1571, 2030
TscAI	CASTG	4 cut(s)	83, 1633, 1935, 1953
TseFI	GTSAC	2 cut(s)	297, 1786
TseI	GCWGC	8 cut(s)	144, 348, 351, 417, 426, 720, 855, 1616
Tsp45I	GTSAC	2 cut(s)	297, 1786
TspGWI	ACGGA	3 cut(s)	16, 334, 1878
TspRI	CASTG	4 cut(s)	83, 1633, 1935, 1953
Tth111I	GACNNNGTC	1 cut(s)	1100
VpaK11BI	GGWCC	1 cut(s)	104
XapI	RAATTY	2 cut(s)	1144, 1988
XhoI	CTCGAG	1 cut(s)	1676
XmnI	GAANNNNTTC	1 cut(s)	980
XspI	CTAG	2 cut(s)	1622, 1887
ZraI	GACGTC	1 cut(s)	297
Zsp2I	ATGCAT	1 cut(s)	61

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.