Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0012573

Physical Location & Seq

Genomic Coordinates Forward (+)

63999501 .. 64004765

Gene Structure 5265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG414200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGAATTTCAGAGAGAATCTACTCTTCGGCCTCTTAACAATCTTTTTGCTCACCGTCACAACCAATGCATCATCGATTGAATCTTGCAATCGATCATGTCCGAGCTTCGGACAGAAACATTTGCCATATCCATTCGGATGCTCAGCCGGCTGTGAAATCCGACTCAACTGCACCGAAGACGCCGGAGTCTTCGTAGGAGAATTCCCGGTCCAGTTTATAAACTTTGAGAGCATAAGAATCAATCTCCAAAGCCGATGCGACCGTCCCTTGCACACCCTCCACCAACTCTACAGCAACCACCACGCGCCGACGTCCCGGAACGCCTTTCTGTTACGAAACTGCACAGACGATCAGTCCTCGAGCAGTTGCGAGATTCCTAGTATTCAGGTCGAGGCCAGGTTTCAGGCCCCAGAGGATTGCAGCAAAAATACAAGCCTCAGTTGCTACGCGGAGAGCAAAAAGAATGCTGCGTTTTTGGAATACGAGAGCGTCGAGAAGAAGGGCTGCAAGTACTTGCTGTCGTCCATATCGGCACAGATTTTGAATAACACGCAGCCTACACAGGCACCGTCGGTGACTTTGGATGTTGAAGTGGCGGAGTTGGGGTGGTGGCTGCCAGGACTTTGCAATTGTGATAAACACGCCAAGTGTATTCCGGTTTCGATGCCGAATGGAAGCGAAGGATACAGGTGCAACTGCACGGAGGGCTTCGTCGGAGATGGTTTTCGGGCTGGCTTTGGCTGCCGGAAAGTTACATCAGACTGCAACCCTGCAAGATTCTTGTCTGGGCAATGTGGAGGAAAGACTAGAATCATCGTTTTGATCGGAGGGGTTGTTTTGGGAGCTTTTCTAATGATCAGTCTAGGTCTGTTGTGCTGTTTCATTCGGCGGCAAGCCAAAGTGAAAGCCAGACACTGCACAAAGCGCCTGCTATCCGAAGCTACAGGCAACTGCAACATTCCCATCTATCCCTATAGAGAACTTGAGAAAGCCACAAATGGCTTCTCAGATAAACAGAGGCTGGGGACTGGAGCCTTTGGGACTGTCTATGCAGGGAAACTCCACGCTGATGAATGGGTTGCCATAAAAAAAATCAGGAACAGAGATGACACCATTGAACACGTCATGAACGAGATCAAACTCATTTCATCTGTAAGGCACCCGAATCTTGTCCGCCTATTGGGATGTTCCATTGAACGTGGTGAGCAGATTCTTGTGTATGAATTCATGGCCAATGGAACATTATGTCAACATTTACAAAGAGAGAGAGGTGATGGACTTTCTTGGCCAATACGTCTCACCATTGCTACTGAAACTGCTCAAGCAATAGCCCATCTCCACTCTGCTGTTAAACCCCCAATTTATCACAGAGACATAAAGTCAAGCAACATTCTTTTGGATTGTAAATTCAAGTCCAAAGTGGCAGATTTTGGTCTTTCGAGGCTTGGCATGACTGAATCTTCCCATATTTCAACAGCTCCACAAGGGACTCCGGGTTATCTCGATCCTCAGTACCATCAGAACTTCCATCTTTCGGATAAGAGTGATGTCTATAGCTTCGGTGTAGTCCTTGTTGAGATTATAACAGGATTAAAAGCAGTGGACTTTTCTCGGCCACAAAATGAAGTGAACTTAGCTGCTCTTGCCACCGATAAGATTGGAAAAGGGTGTTTAAACGAGATCATAGATCGATCTCTTGAACCCTTTATGGATGATTGGACTGCTTCGTCGATTCATAAGGTAGCAGAATTAGCATTCAGATGTTTAGCATTTCATAGAGATGCGAGGCCTTCTATGCTGGAAGTGAAAGCTGAGTTAGAAGAAATCAAGTTAAGTAAATGGCCACCATCAGAAGAAAACACTTACACAGCTTCATCAGAGGAATCTTCTTTCGGTTCTACATCTAGTGTTAGTGAGAAACCTCTGAACACTAGTAAGTCACAATCAGAGCGCAATATCTTTGTGGTGCAGACTAGTGCTGGAGCTGCTAGTAGCTTCAATTCAATGGAAAAGTTGAAGGACAATTCACCAGTTTCAGTGCAAGACTCATGGTTAAGTGCACACAGCTCATCACCTTCATCAAATAGTTTGCTGAGCAATGCACTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

702

Amino Acids

77.4

Weight (kDa)

7.22

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	336 - 603	8.3e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	338 - 549	1.6e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012573)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g03470 FvH4_2g40520 FvH4_2g40520
malus_domestica	MD00G1038300.v1.1 MD08G1038900.v1.1 MD16G1038500.v1.1
prunus_persica	Prupe.1G386400_v2.0.a1
pyrus_communis	pycom08g03060
rosa_chinensis	RchiOBHm_Chr6g0300211
rosa_laevigata	RLG00000011357
rosa_multiflora	Rmu_sc0001670.1_g000034
rosa_roxburghii	Rroxscaffold_7G00168010
rosa_rugosa	Rorug05G0186800 Rorug06G0294100
rosa_samantha	Rh6AG406300 Rh6BG414200 Rh6CG421400 Rh6DG407000
rosa_wichuraiana	Rw6G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	218, 1583
AasI	GACNNNNNNGTC	2 cut(s)	185, 1726
AatII	GACGTC	1 cut(s)	314
AccB1I	GGYRCC	2 cut(s)	565, 1158
AccII	CGCG	2 cut(s)	305, 449
AciI	CCGC	4 cut(s)	449, 596, 889, 1174
AclWI	GGATC	1 cut(s)	1499
AcoI	YGGCCR	4 cut(s)	1230, 1286, 1613, 1841
AcsI	RAATTY	4 cut(s)	4, 200, 1223, 1406
AcyI	GRCGYC	2 cut(s)	180, 311
AfaI	GTAC	2 cut(s)	512, 1514
AfiI	CCNNNNNNNGG	3 cut(s)	107, 1180, 1534
AflIII	ACRYGT	1 cut(s)	1120
AhdI	GACNNNNNGTC	2 cut(s)	352, 1378
AhlI	ACTAGT	2 cut(s)	1931, 1973
AjiI	CACGTC	1 cut(s)	1123
AjnI	CCWGG	2 cut(s)	395, 616
Alw21I	GWGCWC	1 cut(s)	2062
Alw26I	GTCTC	2 cut(s)	1301, 1365
Alw44I	GTGCAC	1 cut(s)	2058
AlwI	GGATC	1 cut(s)	1499
AlwNI	CAGNNNCTG	2 cut(s)	915, 1021
Ama87I	CYCGRG	1 cut(s)	358
AoxI	GGCC	8 cut(s)	28, 393, 405, 1230, 1286, 1613, 1787, 1841
ApaLI	GTGCAC	1 cut(s)	2058
ApeKI	GCWGC	8 cut(s)	420, 467, 504, 553, 613, 741, 1637, 1985
ApoI	RAATTY	4 cut(s)	4, 200, 1223, 1406
AspLEI	GCGC	3 cut(s)	307, 927, 1953
AspS9I	GGNCC	2 cut(s)	208, 406
AsuC2I	CCSGG	3 cut(s)	206, 316, 1494
AsuHPI	GGTGA	7 cut(s)	43, 586, 1214, 1283, 1291, 2019, 2064
AvaI	CYCGRG	1 cut(s)	358
AvaII	GGWCC	1 cut(s)	208
BaeGI	GKGCMC	1 cut(s)	2062
BalI	TGGCCA	3 cut(s)	1232, 1288, 1843
BanI	GGYRCC	2 cut(s)	565, 1158
BbsI	GAAGAC	2 cut(s)	181, 183
Bbv12I	GWGCWC	1 cut(s)	2062
BbvI	GCAGC	8 cut(s)	432, 454, 491, 565, 600, 728, 1624, 1972
BccI	CCATC	7 cut(s)	713, 971, 1268, 1341, 1524, 1536, 1855
BcgI	CGANNNNNNTGC	2 cut(s)	150, 184
BciT130I	CCWGG	2 cut(s)	397, 618
BciVI	GTATCC	1 cut(s)	677
BclI	TGATCA	1 cut(s)	855
BcnI	CCSGG	3 cut(s)	206, 316, 1494
BcoDI	GTCTC	2 cut(s)	1301, 1365
BcuI	ACTAGT	2 cut(s)	1931, 1973
BfaI	CTAG	7 cut(s)	378, 807, 863, 1905, 1932, 1974, 1989
BfmI	CTRYAG	4 cut(s)	289, 942, 973, 1552
BfoI	RGCGCY	1 cut(s)	928
BfuI	GTATCC	1 cut(s)	677
BisI	GCNGC	9 cut(s)	421, 468, 505, 554, 614, 742, 890, 1638, 1986
BlpI	GCTNAGC	2 cut(s)	142, 2093
BlsI	GCNGC	9 cut(s)	422, 469, 506, 555, 615, 743, 891, 1639, 1987
BmcAI	AGTACT	1 cut(s)	512
Bme1390I	CCNGG	5 cut(s)	206, 316, 397, 618, 1494
Bme18I	GGWCC	1 cut(s)	208
BmeRI	GACNNNNNGTC	2 cut(s)	352, 1378
BmeT110I	CYCGRG	1 cut(s)	358
BmgBI	CACGTC	1 cut(s)	1123
BmgT120I	GGNCC	2 cut(s)	208, 406
BmiI	GGNNCC	4 cut(s)	408, 567, 1033, 1160
BmrFI	CCNGG	5 cut(s)	206, 316, 397, 618, 1494
BmsI	GCATC	5 cut(s)	77, 128, 245, 654, 1771
BpiI	GAAGAC	2 cut(s)	181, 183
BpmI	CTGGAG	2 cut(s)	1050, 2001
Bpu1102I	GCTNAGC	2 cut(s)	142, 2093
BpuEI	CTTGAG	2 cut(s)	1004, 1305
BpuMI	CCSGG	3 cut(s)	206, 316, 1494
Bsa29I	ATCGAT	3 cut(s)	74, 91, 1690
BsaHI	GRCGYC	2 cut(s)	180, 311
BsaWI	WCCGGW	1 cut(s)	655
BsaXI	ACNNNNNCTCC	6 cut(s)	177, 207, 590, 620, 819, 849
Bsc4I	CCNNNNNNNGG	3 cut(s)	107, 1180, 1534
Bse118I	RCCGGY	1 cut(s)	146
Bse1I	ACTGG	3 cut(s)	211, 1033, 2030
Bse3DI	GCAATG	3 cut(s)	797, 1302, 2104
BseBI	CCWGG	2 cut(s)	397, 618
BseCI	ATCGAT	3 cut(s)	74, 91, 1690
BseGI	GGATG	4 cut(s)	143, 589, 1190, 1717
BseLI	CCNNNNNNNGG	3 cut(s)	107, 1180, 1534
BseMI	GCAATG	3 cut(s)	797, 1302, 2104
BseMII	CTCAG	6 cut(s)	156, 451, 1020, 1523, 1803, 2084
BseNI	ACTGG	3 cut(s)	211, 1033, 2030
BseSI	GKGCMC	1 cut(s)	2062
BseXI	GCAGC	8 cut(s)	432, 454, 491, 565, 600, 728, 1624, 1972
BseYI	CCCAGC	1 cut(s)	1021
BsgI	GTGCAG	5 cut(s)	154, 325, 682, 901, 1988
Bsh1236I	CGCG	2 cut(s)	305, 449
Bsh1285I	CGRYCG	1 cut(s)	262
BshFI	GGCC	8 cut(s)	30, 395, 407, 1232, 1288, 1615, 1789, 1843
BshNI	GGYRCC	2 cut(s)	565, 1158
BshVI	ATCGAT	3 cut(s)	74, 91, 1690
BsiEI	CGRYCG	1 cut(s)	262
BsiHKAI	GWGCWC	1 cut(s)	2062
BsiHKCI	CYCGRG	1 cut(s)	358
BsiSI	CCGG	7 cut(s)	147, 183, 206, 316, 656, 745, 1493
BslFI	GGGAC	5 cut(s)	249, 298, 1039, 1054, 1501
BslI	CCNNNNNNNGG	3 cut(s)	107, 1180, 1534
BsmAI	GTCTC	2 cut(s)	1301, 1365
BsmBI	CGTCTC	1 cut(s)	1301
BsmFI	GGGAC	5 cut(s)	249, 298, 1039, 1054, 1501
BsmI	GAATGC	2 cut(s)	469, 1754
BsnI	GGCC	8 cut(s)	30, 395, 407, 1232, 1288, 1615, 1789, 1843
BsoBI	CYCGRG	1 cut(s)	358
Bsp1286I	GDGCHC	1 cut(s)	2062
Bsp143I	GATC	9 cut(s)	92, 349, 822, 855, 1134, 1504, 1680, 1687, 1691
Bsp1720I	GCTNAGC	2 cut(s)	142, 2093
BspACI	CCGC	4 cut(s)	449, 596, 889, 1174
BspANI	GGCC	8 cut(s)	30, 395, 407, 1232, 1288, 1615, 1789, 1843
BspCNI	CTCAG	6 cut(s)	155, 450, 1019, 1522, 1804, 2085
BspDI	ATCGAT	3 cut(s)	74, 91, 1690
BspFNI	CGCG	2 cut(s)	305, 449
BspHI	TCATGA	1 cut(s)	1125
BspLI	GGNNCC	4 cut(s)	408, 567, 1033, 1160
BspPI	GGATC	1 cut(s)	1499
BspT107I	GGYRCC	2 cut(s)	565, 1158
BsrDI	GCAATG	3 cut(s)	797, 1302, 2104
BsrFI	RCCGGY	1 cut(s)	146
BsrI	ACTGG	3 cut(s)	211, 1033, 2030
BssAI	RCCGGY	1 cut(s)	146
BssMI	GATC	9 cut(s)	92, 349, 822, 855, 1134, 1504, 1680, 1687, 1691
BssNI	GRCGYC	2 cut(s)	180, 311
Bst2UI	CCWGG	2 cut(s)	397, 618
Bst4CI	ACNGT	4 cut(s)	55, 263, 570, 1045
Bst6I	CTCTTC	1 cut(s)	29
BstACI	GRCGYC	2 cut(s)	180, 311
BstC8I	GCNNGC	4 cut(s)	148, 733, 894, 929
BstDEI	CTNAG	7 cut(s)	142, 437, 1006, 1509, 1633, 1812, 2093
BstF5I	GGATG	4 cut(s)	143, 589, 1190, 1717
BstFNI	CGCG	2 cut(s)	305, 449
BstH2I	RGCGCY	1 cut(s)	928
BstHHI	GCGC	3 cut(s)	307, 927, 1953
BstKTI	GATC	9 cut(s)	95, 352, 825, 858, 1137, 1507, 1683, 1690, 1694
BstMAI	GTCTC	2 cut(s)	1301, 1365
BstMBI	GATC	9 cut(s)	92, 349, 822, 855, 1134, 1504, 1680, 1687, 1691
BstMCI	CGRYCG	1 cut(s)	262
BstMWI	GCNNNNNNNGC	9 cut(s)	147, 441, 705, 741, 924, 1643, 1751, 1795, 1985
BstNI	CCWGG	2 cut(s)	397, 618
BstSCI	CCNGG	5 cut(s)	204, 314, 395, 616, 1492
BstSFI	CTRYAG	4 cut(s)	289, 942, 973, 1552
BstSLI	GKGCMC	1 cut(s)	2062
BstUI	CGCG	2 cut(s)	305, 449
BstV1I	GCAGC	8 cut(s)	432, 454, 491, 565, 600, 728, 1624, 1972
BstV2I	GAAGAC	2 cut(s)	181, 183
Bsu15I	ATCGAT	3 cut(s)	74, 91, 1690
BsuI	GTATCC	1 cut(s)	677
BsuRI	GGCC	8 cut(s)	30, 395, 407, 1232, 1288, 1615, 1789, 1843
BsuTUI	ATCGAT	3 cut(s)	74, 91, 1690
BtrI	CACGTC	1 cut(s)	1123
BtsCI	GGATG	4 cut(s)	143, 589, 1190, 1717
BtsI	GCAGTG	2 cut(s)	913, 1605
BtsIMutI	CAGTG	3 cut(s)	913, 1605, 2043
Cac8I	GCNNGC	4 cut(s)	148, 733, 894, 929
CaiI	CAGNNNCTG	2 cut(s)	915, 1021
CciI	TCATGA	1 cut(s)	1125
CfoI	GCGC	3 cut(s)	307, 927, 1953
Cfr10I	RCCGGY	1 cut(s)	146
Cfr13I	GGNCC	2 cut(s)	208, 406
ClaI	ATCGAT	3 cut(s)	74, 91, 1690
CseI	GACGC	2 cut(s)	188, 478
Csp6I	GTAC	2 cut(s)	511, 1513
CviAII	CATG	5 cut(s)	96, 1126, 1228, 1450, 2049
CviQI	GTAC	2 cut(s)	511, 1513
DdeI	CTNAG	7 cut(s)	142, 437, 1006, 1509, 1633, 1812, 2093
DpnI	GATC	9 cut(s)	94, 351, 824, 857, 1136, 1506, 1682, 1689, 1693
DpnII	GATC	9 cut(s)	92, 349, 822, 855, 1134, 1504, 1680, 1687, 1691
DraI	TTTAAA	1 cut(s)	1674
DrdI	GACNNNNNNGTC	2 cut(s)	185, 1726
DriI	GACNNNNNGTC	2 cut(s)	352, 1378
DseDI	GACNNNNNNGTC	2 cut(s)	185, 1726
EaeI	YGGCCR	4 cut(s)	1230, 1286, 1613, 1841
Eam1104I	CTCTTC	1 cut(s)	29
Eam1105I	GACNNNNNGTC	2 cut(s)	352, 1378
EarI	CTCTTC	1 cut(s)	29
EciI	GGCGGA	2 cut(s)	611, 1163
Eco147I	AGGCCT	1 cut(s)	1789
Eco47I	GGWCC	1 cut(s)	208
Eco88I	CYCGRG	1 cut(s)	358
EcoO109I	RGGNCCY	1 cut(s)	406
EcoRI	GAATTC	2 cut(s)	200, 1223
EcoRII	CCWGG	2 cut(s)	395, 616
EcoT22I	ATGCAT	1 cut(s)	70
Esp3I	CGTCTC	1 cut(s)	1301
FaeI	CATG	5 cut(s)	99, 1129, 1231, 1453, 2052
FaqI	GGGAC	5 cut(s)	249, 298, 1039, 1054, 1501
FatI	CATG	5 cut(s)	95, 1125, 1227, 1449, 2048
FbaI	TGATCA	1 cut(s)	855
Fnu4HI	GCNGC	9 cut(s)	421, 468, 505, 554, 614, 742, 890, 1638, 1986
FokI	GGATG	4 cut(s)	150, 596, 1197, 1724
Fsp4HI	GCNGC	9 cut(s)	421, 468, 505, 554, 614, 742, 890, 1638, 1986
FspBI	CTAG	7 cut(s)	378, 807, 863, 1905, 1932, 1974, 1989
GlaI	GCGC	3 cut(s)	306, 926, 1952
GluI	GCNGC	9 cut(s)	421, 468, 505, 554, 614, 742, 890, 1638, 1986
GsaI	CCCAGC	1 cut(s)	1025
GsuI	CTGGAG	2 cut(s)	1050, 2001
HaeII	RGCGCY	1 cut(s)	928
HaeIII	GGCC	8 cut(s)	30, 395, 407, 1232, 1288, 1615, 1789, 1843
HapII	CCGG	7 cut(s)	147, 183, 206, 316, 656, 745, 1493
HgaI	GACGC	2 cut(s)	188, 478
HhaI	GCGC	3 cut(s)	307, 927, 1953
Hin1I	GRCGYC	2 cut(s)	180, 311
Hin1II	CATG	5 cut(s)	99, 1129, 1231, 1453, 2052
Hin6I	GCGC	3 cut(s)	305, 925, 1951
HinP1I	GCGC	3 cut(s)	305, 925, 1951
HincII	GTYRAC	1 cut(s)	1250
HindII	GTYRAC	1 cut(s)	1250
HpaII	CCGG	7 cut(s)	147, 183, 206, 316, 656, 745, 1493
HphI	GGTGA	7 cut(s)	43, 586, 1214, 1283, 1291, 2019, 2064
Hpy166II	GTNNAC	4 cut(s)	1250, 1603, 1630, 2060
Hpy188III	TCNNGA	5 cut(s)	493, 1096, 1126, 1502, 1697
Hpy8I	GTNNAC	4 cut(s)	1250, 1603, 1630, 2060
Hpy99I	CGWCG	5 cut(s)	313, 494, 574, 716, 1732
HpyAV	CCTTC	5 cut(s)	493, 674, 1800, 2011, 2085
HpyCH4III	ACNGT	4 cut(s)	55, 263, 570, 1045
HpyCH4IV	ACGT	4 cut(s)	311, 1122, 1198, 1294
HpyF10VI	GCNNNNNNNGC	9 cut(s)	147, 441, 705, 741, 924, 1643, 1751, 1795, 1985
HpyF3I	CTNAG	7 cut(s)	142, 437, 1006, 1509, 1633, 1812, 2093
HpySE526I	ACGT	4 cut(s)	311, 1122, 1198, 1294
Hsp92I	GRCGYC	2 cut(s)	180, 311
Hsp92II	CATG	5 cut(s)	99, 1129, 1231, 1453, 2052
HspAI	GCGC	3 cut(s)	305, 925, 1951
KroI	GCCGGC	1 cut(s)	146
KroNI	GCCGGC	1 cut(s)	148
Ksp22I	TGATCA	1 cut(s)	855
Kzo9I	GATC	9 cut(s)	92, 349, 822, 855, 1134, 1504, 1680, 1687, 1691
LmnI	GCTCC	4 cut(s)	842, 1031, 1483, 1982
Lsp1109I	GCAGC	8 cut(s)	432, 454, 491, 565, 600, 728, 1624, 1972
LweI	GCATC	5 cut(s)	77, 128, 245, 654, 1771
MaeI	CTAG	7 cut(s)	378, 807, 863, 1905, 1932, 1974, 1989
MaeII	ACGT	4 cut(s)	311, 1122, 1198, 1294
MaeIII	GTNAC	5 cut(s)	55, 330, 574, 751, 1938
MalI	GATC	9 cut(s)	94, 351, 824, 857, 1136, 1506, 1682, 1689, 1693
MboI	GATC	9 cut(s)	92, 349, 822, 855, 1134, 1504, 1680, 1687, 1691
MboII	GAAGA	8 cut(s)	16, 181, 188, 508, 1452, 1832, 1865, 1878
MfeI	CAATTG	1 cut(s)	628
MhlI	GDGCHC	1 cut(s)	2062
MlsI	TGGCCA	3 cut(s)	1232, 1288, 1843
MluCI	AATT	9 cut(s)	4, 200, 628, 1223, 1359, 1406, 1748, 1999, 2023
MluNI	TGGCCA	3 cut(s)	1232, 1288, 1843
MlyI	GAGTC	4 cut(s)	156, 195, 1483, 2039
MmeI	TCCRAC	2 cut(s)	184, 694
Mox20I	TGGCCA	3 cut(s)	1232, 1288, 1843
Mph1103I	ATGCAT	1 cut(s)	70
MroNI	GCCGGC	1 cut(s)	146
MscI	TGGCCA	3 cut(s)	1232, 1288, 1843
MseI	TTAA	6 cut(s)	35, 1350, 1592, 1673, 1832, 2054
MslI	CAYNNNNRTG	4 cut(s)	136, 1068, 1759, 1779
Msp20I	TGGCCA	3 cut(s)	1232, 1288, 1843
MspI	CCGG	7 cut(s)	147, 183, 206, 316, 656, 745, 1493
MspR9I	CCNGG	5 cut(s)	206, 316, 397, 618, 1494
MssI	GTTTAAAC	1 cut(s)	1674
MunI	CAATTG	1 cut(s)	628
Mva1269I	GAATGC	2 cut(s)	469, 1754
MvaI	CCWGG	2 cut(s)	397, 618
MvnI	CGCG	2 cut(s)	305, 449
MwoI	GCNNNNNNNGC	9 cut(s)	147, 441, 705, 741, 924, 1643, 1751, 1795, 1985
NaeI	GCCGGC	1 cut(s)	148
NciI	CCSGG	3 cut(s)	206, 316, 1494
NdeII	GATC	9 cut(s)	92, 349, 822, 855, 1134, 1504, 1680, 1687, 1691
NgoMIV	GCCGGC	1 cut(s)	146
NlaIII	CATG	5 cut(s)	99, 1129, 1231, 1453, 2052
NlaIV	GGNNCC	4 cut(s)	408, 567, 1033, 1160
NmeAIII	GCCGAG	1 cut(s)	1591
NmuCI	GTSAC	3 cut(s)	55, 574, 1938
NsiI	ATGCAT	1 cut(s)	70
PaeR7I	CTCGAG	1 cut(s)	358
PagI	TCATGA	1 cut(s)	1125
PceI	AGGCCT	1 cut(s)	1789
PcsI	WCGNNNNNNNCGW	2 cut(s)	489, 1128
PctI	GAATGC	2 cut(s)	469, 1754
PdiI	GCCGGC	1 cut(s)	148
PfoI	TCCNGGA	1 cut(s)	314
PkrI	GCNGC	9 cut(s)	422, 469, 506, 555, 615, 743, 891, 1639, 1987
PleI	GAGTC	4 cut(s)	156, 194, 1483, 2039
PmeI	GTTTAAAC	1 cut(s)	1674
PpsI	GAGTC	4 cut(s)	156, 194, 1483, 2039
PsiI	TTATAA	2 cut(s)	218, 1583
Psp6I	CCWGG	2 cut(s)	395, 616
PspFI	CCCAGC	1 cut(s)	1021
PspGI	CCWGG	2 cut(s)	395, 616
PspN4I	GGNNCC	4 cut(s)	408, 567, 1033, 1160
PspPI	GGNCC	2 cut(s)	208, 406
PspXI	VCTCGAGB	1 cut(s)	358
PstNI	CAGNNNCTG	2 cut(s)	915, 1021
RsaI	GTAC	2 cut(s)	512, 1514
RsaNI	GTAC	2 cut(s)	511, 1513
RseI	CAYNNNNRTG	4 cut(s)	136, 1068, 1759, 1779
SaqAI	TTAA	6 cut(s)	35, 1350, 1592, 1673, 1832, 2054
SatI	GCNGC	9 cut(s)	421, 468, 505, 554, 614, 742, 890, 1638, 1986
Sau3AI	GATC	9 cut(s)	92, 349, 822, 855, 1134, 1504, 1680, 1687, 1691
Sau96I	GGNCC	2 cut(s)	208, 406
ScaI	AGTACT	1 cut(s)	512
SchI	GAGTC	4 cut(s)	156, 195, 1483, 2039
ScrFI	CCNGG	5 cut(s)	206, 316, 397, 618, 1494
SduI	GDGCHC	1 cut(s)	2062
SfaNI	GCATC	5 cut(s)	77, 128, 245, 654, 1771
SfcI	CTRYAG	4 cut(s)	289, 942, 973, 1552
Sfr274I	CTCGAG	1 cut(s)	358
SinI	GGWCC	1 cut(s)	208
SlaI	CTCGAG	1 cut(s)	358
SmiMI	CAYNNNNRTG	4 cut(s)	136, 1068, 1759, 1779
SmlI	CTYRAG	3 cut(s)	358, 983, 1320
SmoI	CTYRAG	3 cut(s)	358, 983, 1320
SpeI	ACTAGT	2 cut(s)	1931, 1973
Sse9I	AATT	9 cut(s)	4, 200, 628, 1223, 1359, 1406, 1748, 1999, 2023
SseBI	AGGCCT	1 cut(s)	1789
SsiI	CCGC	4 cut(s)	449, 596, 889, 1174
SspMI	CTAG	7 cut(s)	378, 807, 863, 1905, 1932, 1974, 1989
StuI	AGGCCT	1 cut(s)	1789
StyD4I	CCNGG	5 cut(s)	204, 314, 395, 616, 1492
TaaI	ACNGT	4 cut(s)	55, 263, 570, 1045
TaiI	ACGT	4 cut(s)	314, 1125, 1201, 1297
TasI	AATT	9 cut(s)	4, 200, 628, 1223, 1359, 1406, 1748, 1999, 2023
TatI	WGTACW	1 cut(s)	510
TauI	GCSGC	1 cut(s)	892
Tru1I	TTAA	6 cut(s)	35, 1350, 1592, 1673, 1832, 2054
Tru9I	TTAA	6 cut(s)	35, 1350, 1592, 1673, 1832, 2054
TscAI	CASTG	3 cut(s)	920, 1605, 2043
TseFI	GTSAC	3 cut(s)	55, 574, 1938
TseI	GCWGC	8 cut(s)	420, 467, 504, 553, 613, 741, 1637, 1985
Tsp45I	GTSAC	3 cut(s)	55, 574, 1938
TspGWI	ACGGA	1 cut(s)	716
TspRI	CASTG	3 cut(s)	920, 1605, 2043
VneI	GTGCAC	1 cut(s)	2058
VpaK11BI	GGWCC	1 cut(s)	208
XapI	RAATTY	4 cut(s)	4, 200, 1223, 1406
XhoI	CTCGAG	1 cut(s)	358
XspI	CTAG	7 cut(s)	378, 807, 863, 1905, 1932, 1974, 1989
ZraI	GACGTC	1 cut(s)	312
ZrmI	AGTACT	1 cut(s)	512
Zsp2I	ATGCAT	1 cut(s)	70

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.