Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0012573

Physical Location & Seq

Genomic Coordinates Forward (+)

60172889 .. 60177848

Gene Structure 4960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G035550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGAATATCAGAGAGAATCTAATCTTCCGCCTCCTAGCAATCCTTTTCCTCATCGTCACTACCAATGCATCATCGATTCAATCTTGCAATCGATCGTGTTTGAGCTCCTTCGGACCCGATCGCTTGCCATATCCATTCGGATGCTCAGCCGGCTGTGAAATCCAACTCAATTGTACAGAAAACGCCGGAGTCTTCATCGGAGATTTCCCCGTCCAGTCGATAAACTTTGAGAGCATAAGAATCAACCTCCAAAGCCGATGCAACCGTCCCTTGCACACCCTCCACCAACTCTACAGCAATCACCACGCGCCGACGTCTCGAAACGCCTTTCTGTTACGAAACTGCACGGATGATCAGGCCTCCAGCAGTTGCGAGATTCCTAGTATCCAGGTCGAGGCCAGGTTTCAGGCCCCACAGGATTGCAGCAAAAATACAAGCCTCAGTTGCTACGCGGAGAGCAATAAGAGTGCTACGTTTTTGGAATACGAGAGCGTCGAGAAGAGGGGCTGCAAGTACTTGCTGTCGTCCATATCGGCACAGATTTTGAATAACACGAAGACGCCGTCGGTGACGTTGGATGTTGAAGTGGCGGAGTTGGGGTGGTGGCTGCCAGGAGTTTGCAATTGTGATAAACACGCCCAGTGCTTTACGGTTTTGACGCCGAATGGAAGCCACGGATACAGGTGCAACTGCACTAAGGGCTTCGTCGGAGATGGTTTTCGGGCTGGCTTTGGCTGCCGGAAAGCTTCACCAGACTGCAACCCTGCAAAATTCTTGTCTGGGCAATGTAAAGGAAAGAAGACCAGAATCATCGTTTTGATCGGAGGTGTCGTTTTTGGAGCTTTTCTAATGATCAGTCTAGGTCTGTTGTGCTGTTTCATTCGGCGGCAAGCCAAAGTGAAAGCCAGACACTGCACAAAGCGCCTGCTATCCGAAGCTACAGGCAACTGCAACATTCCCATCTATCCCTATAGAGAAATTGAGAAAGCCACAAATGGCTTCTCAGAAAAACAGAGGCTGGGGACTGGAGCCTTTGGGACTGTCTATGCAGGGAAACTCCACGCTGATGAATGGGTTGCCATAAAAAAAATCAAGAACAGAGATGACACCATTGAACACCACCCGAATCTTGTCCGCCTATTGGGATGTTCCATTGAACATGGTGAGCAGATTCTTGTGTATGAATTCATGGCCAATGGAACATTATGTCAACATTTACAAAGAGAGAGAGGTGATGGACTTTCTTGGCCTATACGTCTCACCATTGCTACTGAAACTGCTCAAGCAATAGCCCATCTCCACTCTGCTGTTAAACCCCCAATTTATCACAGAGACATAAAGTCAAGCAACATTCTTTTGGATTGTAAATTCAAGTCCAAAGTGGCAGATTTTGGTCTTTCGAGACTTGGCATGACTGAATCTTCCCACATTTCAACAGCTCCACAAGGGACTCCGGGTTATCTCGATCCTCAGTACCATCAGAACTTCCATCTTTCGGATAAGAGTGATGTCTATAGCTTCGGTGTAGTCCTTGTTGAGATTATAACAGGATTAAAAGCAGTGGACTTTTCTCGGCCACAAAATGAAGTGAACTTAGCTGCTCTTGCCACCGATAAGATTGGAAAAGGGTGTTTAAACGAGATCATAGATCGATCTCTTGAACCCTTTATGGATGATTGGACTGCTTCATGTTTAGCATTTCATAGAGATGCGAGGCCTTCTATGCTGGAAGTGAAAGCTGAGTTAGAAGAAATCAAGTTAAGTAAATGGCCACCATCAGAAGAAAACACTTACACAGCTTCATCAGAGGAATCTTCTTTCGGTTCTACATCTAGTGTTAGTGAGAAACCTCTGAACACTAGTAAGTCACAATCAGAGCGCAATATCTTTGTGGTGCAGACTATTGCTGGAGCTGCTAGTAGCTTCAATTCACTGGAAAAGTTGAAGGACAATTCACCAGTTTCAGTGCAAGACTCATGGTTAAGTGAACACAGCTCATCACCTTCATCAAATAGTTTGCTGAGCAATGCACTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

678

Amino Acids

74.74

Weight (kDa)

7.88

Isoelectric Point (pI)

43.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	334 - 579	5.7e-33	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	337 - 582	2e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012573)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g03470 FvH4_2g40520 FvH4_2g40520
malus_domestica	MD00G1038300.v1.1 MD08G1038900.v1.1 MD16G1038500.v1.1
prunus_persica	Prupe.1G386400_v2.0.a1
pyrus_communis	pycom08g03060
rosa_chinensis	RchiOBHm_Chr6g0300211
rosa_laevigata	RLG00000011357
rosa_multiflora	Rmu_sc0001670.1_g000034
rosa_roxburghii	Rroxscaffold_7G00168010
rosa_rugosa	Rorug05G0186800 Rorug06G0294100
rosa_samantha	Rh6AG406300 Rh6BG414200 Rh6CG421400 Rh6DG407000
rosa_wichuraiana	Rw6G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1544
AatII	GACGTC	1 cut(s)	317
AccII	CGCG	2 cut(s)	308, 452
AciI	CCGC	5 cut(s)	28, 452, 590, 886, 1135
AclWI	GGATC	1 cut(s)	1460
AcoI	YGGCCR	3 cut(s)	1191, 1574, 1769
AcsI	RAATTY	3 cut(s)	770, 1184, 1367
AcyI	GRCGYC	3 cut(s)	314, 560, 659
AfaI	GTAC	3 cut(s)	175, 515, 1475
AfiI	CCNNNNNNNGG	3 cut(s)	394, 1141, 1495
AhdI	GACNNNNNGTC	1 cut(s)	1339
AhlI	ACTAGT	1 cut(s)	1859
AjnI	CCWGG	3 cut(s)	387, 398, 610
Alw21I	GWGCWC	1 cut(s)	107
Alw26I	GTCTC	4 cut(s)	321, 1262, 1326, 1396
AlwI	GGATC	1 cut(s)	1460
AlwNI	CAGNNNCTG	2 cut(s)	912, 1018
AoxI	GGCC	8 cut(s)	357, 396, 408, 1191, 1247, 1574, 1715, 1769
ApeKI	GCWGC	6 cut(s)	423, 507, 607, 735, 1598, 1913
ApoI	RAATTY	3 cut(s)	770, 1184, 1367
ArsI	GACNNNNNNTTYG	4 cut(s)	548, 580, 761, 793
AspLEI	GCGC	3 cut(s)	310, 924, 1881
AspS9I	GGNCC	2 cut(s)	113, 409
AsuC2I	CCSGG	1 cut(s)	1455
AsuHPI	GGTGA	8 cut(s)	293, 580, 741, 1175, 1244, 1252, 1947, 1992
AvaII	GGWCC	1 cut(s)	113
BalI	TGGCCA	2 cut(s)	1193, 1771
BanII	GRGCYC	1 cut(s)	107
BbsI	GAAGAC	3 cut(s)	184, 563, 806
Bbv12I	GWGCWC	1 cut(s)	107
BbvI	GCAGC	6 cut(s)	435, 494, 594, 722, 1585, 1900
BccI	CCATC	7 cut(s)	707, 968, 1229, 1302, 1485, 1497, 1783
BceAI	ACGGC	1 cut(s)	547
BciT130I	CCWGG	3 cut(s)	389, 400, 612
BciVI	GTATCC	2 cut(s)	395, 671
BclI	TGATCA	2 cut(s)	352, 852
BcnI	CCSGG	1 cut(s)	1455
BcoDI	GTCTC	4 cut(s)	321, 1262, 1326, 1396
BcuI	ACTAGT	1 cut(s)	1859
BfaI	CTAG	6 cut(s)	35, 381, 860, 1833, 1860, 1917
BfmI	CTRYAG	4 cut(s)	292, 939, 970, 1513
BfoI	RGCGCY	1 cut(s)	925
BfuI	GTATCC	2 cut(s)	395, 671
BisI	GCNGC	7 cut(s)	424, 508, 608, 736, 887, 1599, 1914
BlpI	GCTNAGC	2 cut(s)	145, 2021
BlsI	GCNGC	7 cut(s)	425, 509, 609, 737, 888, 1600, 1915
BmcAI	AGTACT	1 cut(s)	515
Bme1390I	CCNGG	4 cut(s)	389, 400, 612, 1455
Bme18I	GGWCC	1 cut(s)	113
BmeRI	GACNNNNNGTC	1 cut(s)	1339
BmgT120I	GGNCC	2 cut(s)	113, 409
BmiI	GGNNCC	3 cut(s)	115, 411, 1030
BmrFI	CCNGG	4 cut(s)	389, 400, 612, 1455
BmrI	ACTGGG	1 cut(s)	634
BmsI	GCATC	4 cut(s)	77, 131, 248, 1699
BmuI	ACTGGG	1 cut(s)	634
BpiI	GAAGAC	3 cut(s)	184, 563, 806
BpmI	CTGGAG	3 cut(s)	346, 1047, 1929
Bpu1102I	GCTNAGC	2 cut(s)	145, 2021
BpuEI	CTTGAG	1 cut(s)	1266
BpuMI	CCSGG	1 cut(s)	1455
Bsa29I	ATCGAT	3 cut(s)	74, 91, 1651
BsaHI	GRCGYC	3 cut(s)	314, 560, 659
BsaJI	CCNNGG	1 cut(s)	673
BsaXI	ACNNNNNCTCC	4 cut(s)	584, 614, 816, 846
Bsc4I	CCNNNNNNNGG	3 cut(s)	394, 1141, 1495
Bse118I	RCCGGY	1 cut(s)	149
Bse1I	ACTGG	5 cut(s)	214, 640, 1030, 1938, 1958
Bse3DI	GCAATG	3 cut(s)	791, 1263, 2032
BseBI	CCWGG	3 cut(s)	389, 400, 612
BseCI	ATCGAT	3 cut(s)	74, 91, 1651
BseDI	CCNNGG	1 cut(s)	673
BseGI	GGATG	5 cut(s)	146, 355, 583, 1151, 1678
BseLI	CCNNNNNNNGG	3 cut(s)	394, 1141, 1495
BseMI	GCAATG	3 cut(s)	791, 1263, 2032
BseMII	CTCAG	6 cut(s)	159, 454, 1017, 1484, 1731, 2012
BseNI	ACTGG	5 cut(s)	214, 640, 1030, 1938, 1958
BseXI	GCAGC	6 cut(s)	435, 494, 594, 722, 1585, 1900
BseYI	CCCAGC	1 cut(s)	1018
BsgI	GTGCAG	4 cut(s)	328, 676, 898, 1916
Bsh1236I	CGCG	2 cut(s)	308, 452
Bsh1285I	CGRYCG	2 cut(s)	95, 121
BshFI	GGCC	8 cut(s)	359, 398, 410, 1193, 1249, 1576, 1717, 1771
BshVI	ATCGAT	3 cut(s)	74, 91, 1651
BsiEI	CGRYCG	2 cut(s)	95, 121
BsiHKAI	GWGCWC	1 cut(s)	107
BsiSI	CCGG	4 cut(s)	150, 186, 739, 1454
BslFI	GGGAC	4 cut(s)	252, 1036, 1051, 1462
BslI	CCNNNNNNNGG	3 cut(s)	394, 1141, 1495
BsmAI	GTCTC	4 cut(s)	321, 1262, 1326, 1396
BsmBI	CGTCTC	2 cut(s)	321, 1262
BsmFI	GGGAC	4 cut(s)	252, 1036, 1051, 1462
BsnI	GGCC	8 cut(s)	359, 398, 410, 1193, 1249, 1576, 1717, 1771
Bsp1286I	GDGCHC	1 cut(s)	107
Bsp1407I	TGTACA	1 cut(s)	173
Bsp143I	GATC	9 cut(s)	92, 118, 352, 819, 852, 1465, 1641, 1648, 1652
Bsp1720I	GCTNAGC	2 cut(s)	145, 2021
BspACI	CCGC	5 cut(s)	28, 452, 590, 886, 1135
BspANI	GGCC	8 cut(s)	359, 398, 410, 1193, 1249, 1576, 1717, 1771
BspCNI	CTCAG	6 cut(s)	158, 453, 1016, 1483, 1732, 2013
BspDI	ATCGAT	3 cut(s)	74, 91, 1651
BspFNI	CGCG	2 cut(s)	308, 452
BspLI	GGNNCC	3 cut(s)	115, 411, 1030
BspPI	GGATC	1 cut(s)	1460
BsrDI	GCAATG	3 cut(s)	791, 1263, 2032
BsrFI	RCCGGY	1 cut(s)	149
BsrGI	TGTACA	1 cut(s)	173
BsrI	ACTGG	5 cut(s)	214, 640, 1030, 1938, 1958
BssAI	RCCGGY	1 cut(s)	149
BssECI	CCNNGG	1 cut(s)	673
BssMI	GATC	9 cut(s)	92, 118, 352, 819, 852, 1465, 1641, 1648, 1652
BssNI	GRCGYC	3 cut(s)	314, 560, 659
Bst2UI	CCWGG	3 cut(s)	389, 400, 612
Bst4CI	ACNGT	3 cut(s)	266, 652, 1042
Bst6I	CTCTTC	1 cut(s)	494
BstACI	GRCGYC	3 cut(s)	314, 560, 659
BstAUI	TGTACA	1 cut(s)	173
BstC8I	GCNNGC	5 cut(s)	125, 151, 727, 891, 926
BstDEI	CTNAG	8 cut(s)	145, 440, 696, 1003, 1470, 1594, 1740, 2021
BstDSI	CCRYGG	1 cut(s)	673
BstF5I	GGATG	5 cut(s)	146, 355, 583, 1151, 1678
BstFNI	CGCG	2 cut(s)	308, 452
BstH2I	RGCGCY	1 cut(s)	925
BstHHI	GCGC	3 cut(s)	310, 924, 1881
BstKTI	GATC	9 cut(s)	95, 121, 355, 822, 855, 1468, 1644, 1651, 1655
BstMAI	GTCTC	4 cut(s)	321, 1262, 1326, 1396
BstMBI	GATC	9 cut(s)	92, 118, 352, 819, 852, 1465, 1641, 1648, 1652
BstMCI	CGRYCG	2 cut(s)	95, 121
BstMWI	GCNNNNNNNGC	8 cut(s)	150, 444, 699, 735, 921, 1604, 1723, 1913
BstNI	CCWGG	3 cut(s)	389, 400, 612
BstSCI	CCNGG	4 cut(s)	387, 398, 610, 1453
BstSFI	CTRYAG	4 cut(s)	292, 939, 970, 1513
BstUI	CGCG	2 cut(s)	308, 452
BstV1I	GCAGC	6 cut(s)	435, 494, 594, 722, 1585, 1900
BstV2I	GAAGAC	3 cut(s)	184, 563, 806
Bsu15I	ATCGAT	3 cut(s)	74, 91, 1651
BsuI	GTATCC	2 cut(s)	395, 671
BsuRI	GGCC	8 cut(s)	359, 398, 410, 1193, 1249, 1576, 1717, 1771
BsuTUI	ATCGAT	3 cut(s)	74, 91, 1651
BtgI	CCRYGG	1 cut(s)	673
BtsCI	GGATG	5 cut(s)	146, 355, 583, 1151, 1678
BtsI	GCAGTG	2 cut(s)	910, 1566
BtsIMutI	CAGTG	5 cut(s)	647, 910, 1566, 1931, 1971
Cac8I	GCNNGC	5 cut(s)	125, 151, 727, 891, 926
CaiI	CAGNNNCTG	2 cut(s)	912, 1018
CfoI	GCGC	3 cut(s)	310, 924, 1881
Cfr10I	RCCGGY	1 cut(s)	149
Cfr13I	GGNCC	2 cut(s)	113, 409
ClaI	ATCGAT	3 cut(s)	74, 91, 1651
CseI	GACGC	3 cut(s)	481, 568, 667
Csp6I	GTAC	3 cut(s)	174, 514, 1474
CviAII	CATG	5 cut(s)	1160, 1189, 1411, 1689, 1977
CviQI	GTAC	3 cut(s)	174, 514, 1474
DdeI	CTNAG	8 cut(s)	145, 440, 696, 1003, 1470, 1594, 1740, 2021
DpnI	GATC	9 cut(s)	94, 120, 354, 821, 854, 1467, 1643, 1650, 1654
DpnII	GATC	9 cut(s)	92, 118, 352, 819, 852, 1465, 1641, 1648, 1652
DraI	TTTAAA	1 cut(s)	1635
DriI	GACNNNNNGTC	1 cut(s)	1339
EaeI	YGGCCR	3 cut(s)	1191, 1574, 1769
Eam1104I	CTCTTC	1 cut(s)	494
Eam1105I	GACNNNNNGTC	1 cut(s)	1339
EarI	CTCTTC	1 cut(s)	494
EciI	GGCGGA	3 cut(s)	17, 605, 1124
Ecl136II	GAGCTC	1 cut(s)	105
Eco147I	AGGCCT	2 cut(s)	359, 1717
Eco24I	GRGCYC	1 cut(s)	107
Eco47I	GGWCC	1 cut(s)	113
Eco53kI	GAGCTC	1 cut(s)	105
EcoICRI	GAGCTC	1 cut(s)	105
EcoO109I	RGGNCCY	1 cut(s)	409
EcoRI	GAATTC	1 cut(s)	1184
EcoRII	CCWGG	3 cut(s)	387, 398, 610
EcoT22I	ATGCAT	1 cut(s)	70
EcoT38I	GRGCYC	1 cut(s)	107
Esp3I	CGTCTC	2 cut(s)	321, 1262
FaeI	CATG	5 cut(s)	1163, 1192, 1414, 1692, 1980
FaqI	GGGAC	4 cut(s)	252, 1036, 1051, 1462
FatI	CATG	5 cut(s)	1159, 1188, 1410, 1688, 1976
FbaI	TGATCA	2 cut(s)	352, 852
Fnu4HI	GCNGC	7 cut(s)	424, 508, 608, 736, 887, 1599, 1914
FokI	GGATG	5 cut(s)	153, 362, 590, 1158, 1685
FriOI	GRGCYC	1 cut(s)	107
Fsp4HI	GCNGC	7 cut(s)	424, 508, 608, 736, 887, 1599, 1914
FspBI	CTAG	6 cut(s)	35, 381, 860, 1833, 1860, 1917
GlaI	GCGC	3 cut(s)	309, 923, 1880
GluI	GCNGC	7 cut(s)	424, 508, 608, 736, 887, 1599, 1914
GsaI	CCCAGC	1 cut(s)	1022
GsuI	CTGGAG	3 cut(s)	346, 1047, 1929
HaeII	RGCGCY	1 cut(s)	925
HaeIII	GGCC	8 cut(s)	359, 398, 410, 1193, 1249, 1576, 1717, 1771
HapII	CCGG	4 cut(s)	150, 186, 739, 1454
HgaI	GACGC	3 cut(s)	481, 568, 667
HhaI	GCGC	3 cut(s)	310, 924, 1881
Hin1I	GRCGYC	3 cut(s)	314, 560, 659
Hin1II	CATG	5 cut(s)	1163, 1192, 1414, 1692, 1980
Hin6I	GCGC	3 cut(s)	308, 922, 1879
HinP1I	GCGC	3 cut(s)	308, 922, 1879
HincII	GTYRAC	1 cut(s)	1211
HindII	GTYRAC	1 cut(s)	1211
HindIII	AAGCTT	1 cut(s)	744
HpaII	CCGG	4 cut(s)	150, 186, 739, 1454
HphI	GGTGA	8 cut(s)	293, 580, 741, 1175, 1244, 1252, 1947, 1992
Hpy166II	GTNNAC	4 cut(s)	1211, 1564, 1591, 1988
Hpy188III	TCNNGA	6 cut(s)	318, 496, 1093, 1401, 1463, 1658
Hpy8I	GTNNAC	4 cut(s)	1211, 1564, 1591, 1988
Hpy99I	CGWCG	4 cut(s)	316, 497, 568, 710
HpyAV	CCTTC	4 cut(s)	118, 1728, 1939, 2013
HpyCH4III	ACNGT	3 cut(s)	266, 652, 1042
HpyCH4IV	ACGT	4 cut(s)	314, 473, 572, 1255
HpyF10VI	GCNNNNNNNGC	8 cut(s)	150, 444, 699, 735, 921, 1604, 1723, 1913
HpyF3I	CTNAG	8 cut(s)	145, 440, 696, 1003, 1470, 1594, 1740, 2021
HpySE526I	ACGT	4 cut(s)	314, 473, 572, 1255
Hsp92I	GRCGYC	3 cut(s)	314, 560, 659
Hsp92II	CATG	5 cut(s)	1163, 1192, 1414, 1692, 1980
HspAI	GCGC	3 cut(s)	308, 922, 1879
KroI	GCCGGC	1 cut(s)	149
KroNI	GCCGGC	1 cut(s)	151
Ksp22I	TGATCA	2 cut(s)	352, 852
Kzo9I	GATC	9 cut(s)	92, 118, 352, 819, 852, 1465, 1641, 1648, 1652
LmnI	GCTCC	5 cut(s)	110, 839, 1028, 1444, 1910
Lsp1109I	GCAGC	6 cut(s)	435, 494, 594, 722, 1585, 1900
LweI	GCATC	4 cut(s)	77, 131, 248, 1699
MaeI	CTAG	6 cut(s)	35, 381, 860, 1833, 1860, 1917
MaeII	ACGT	4 cut(s)	314, 473, 572, 1255
MaeIII	GTNAC	4 cut(s)	55, 333, 568, 1866
MalI	GATC	9 cut(s)	94, 120, 354, 821, 854, 1467, 1643, 1650, 1654
MboI	GATC	9 cut(s)	92, 118, 352, 819, 852, 1465, 1641, 1648, 1652
MboII	GAAGA	9 cut(s)	16, 184, 511, 568, 811, 1413, 1760, 1793, 1806
MfeI	CAATTG	2 cut(s)	169, 622
MhlI	GDGCHC	1 cut(s)	107
MlsI	TGGCCA	2 cut(s)	1193, 1771
MluCI	AATT	9 cut(s)	169, 622, 770, 978, 1184, 1320, 1367, 1927, 1951
MluNI	TGGCCA	2 cut(s)	1193, 1771
MlyI	GAGTC	3 cut(s)	198, 1444, 1967
MmeI	TCCRAC	3 cut(s)	187, 555, 688
Mox20I	TGGCCA	2 cut(s)	1193, 1771
Mph1103I	ATGCAT	1 cut(s)	70
MroNI	GCCGGC	1 cut(s)	149
MscI	TGGCCA	2 cut(s)	1193, 1771
MseI	TTAA	5 cut(s)	1311, 1553, 1634, 1760, 1982
MslI	CAYNNNNRTG	3 cut(s)	139, 1065, 1707
Msp20I	TGGCCA	2 cut(s)	1193, 1771
MspI	CCGG	4 cut(s)	150, 186, 739, 1454
MspR9I	CCNGG	4 cut(s)	389, 400, 612, 1455
MssI	GTTTAAAC	1 cut(s)	1635
MunI	CAATTG	2 cut(s)	169, 622
MvaI	CCWGG	3 cut(s)	389, 400, 612
MvnI	CGCG	2 cut(s)	308, 452
MwoI	GCNNNNNNNGC	8 cut(s)	150, 444, 699, 735, 921, 1604, 1723, 1913
NaeI	GCCGGC	1 cut(s)	151
NciI	CCSGG	1 cut(s)	1455
NdeII	GATC	9 cut(s)	92, 118, 352, 819, 852, 1465, 1641, 1648, 1652
NgoMIV	GCCGGC	1 cut(s)	149
NlaIII	CATG	5 cut(s)	1163, 1192, 1414, 1692, 1980
NlaIV	GGNNCC	3 cut(s)	115, 411, 1030
NmeAIII	GCCGAG	1 cut(s)	1552
NmuCI	GTSAC	3 cut(s)	55, 568, 1866
NsiI	ATGCAT	1 cut(s)	70
PceI	AGGCCT	2 cut(s)	359, 1717
PcsI	WCGNNNNNNNCGW	3 cut(s)	492, 560, 828
PdiI	GCCGGC	1 cut(s)	151
PfeI	GAWTC	9 cut(s)	16, 76, 240, 376, 807, 1126, 1171, 1418, 1811
PflFI	GACNNNGTC	1 cut(s)	562
PkrI	GCNGC	7 cut(s)	425, 509, 609, 737, 888, 1600, 1915
Ple19I	CGATCG	2 cut(s)	95, 121
PleI	GAGTC	3 cut(s)	197, 1444, 1967
PmeI	GTTTAAAC	1 cut(s)	1635
PpsI	GAGTC	3 cut(s)	197, 1444, 1967
PsiI	TTATAA	1 cut(s)	1544
Psp124BI	GAGCTC	1 cut(s)	107
Psp6I	CCWGG	3 cut(s)	387, 398, 610
PspFI	CCCAGC	1 cut(s)	1018
PspGI	CCWGG	3 cut(s)	387, 398, 610
PspN4I	GGNNCC	3 cut(s)	115, 411, 1030
PspPI	GGNCC	2 cut(s)	113, 409
PstNI	CAGNNNCTG	2 cut(s)	912, 1018
PsyI	GACNNNGTC	1 cut(s)	562
PvuI	CGATCG	2 cut(s)	95, 121
RsaI	GTAC	3 cut(s)	175, 515, 1475
RsaNI	GTAC	3 cut(s)	174, 514, 1474
RseI	CAYNNNNRTG	3 cut(s)	139, 1065, 1707
SacI	GAGCTC	1 cut(s)	107
SaqAI	TTAA	5 cut(s)	1311, 1553, 1634, 1760, 1982
SatI	GCNGC	7 cut(s)	424, 508, 608, 736, 887, 1599, 1914
Sau3AI	GATC	9 cut(s)	92, 118, 352, 819, 852, 1465, 1641, 1648, 1652
Sau96I	GGNCC	2 cut(s)	113, 409
ScaI	AGTACT	1 cut(s)	515
SchI	GAGTC	3 cut(s)	198, 1444, 1967
ScrFI	CCNGG	4 cut(s)	389, 400, 612, 1455
SduI	GDGCHC	1 cut(s)	107
SfaNI	GCATC	4 cut(s)	77, 131, 248, 1699
SfcI	CTRYAG	4 cut(s)	292, 939, 970, 1513
SinI	GGWCC	1 cut(s)	113
SmiMI	CAYNNNNRTG	3 cut(s)	139, 1065, 1707
SmlI	CTYRAG	1 cut(s)	1281
SmoI	CTYRAG	1 cut(s)	1281
SpeI	ACTAGT	1 cut(s)	1859
Sse9I	AATT	9 cut(s)	169, 622, 770, 978, 1184, 1320, 1367, 1927, 1951
SseBI	AGGCCT	2 cut(s)	359, 1717
SsiI	CCGC	5 cut(s)	28, 452, 590, 886, 1135
SspMI	CTAG	6 cut(s)	35, 381, 860, 1833, 1860, 1917
SstI	GAGCTC	1 cut(s)	107
StuI	AGGCCT	2 cut(s)	359, 1717
StyD4I	CCNGG	4 cut(s)	387, 398, 610, 1453
TaaI	ACNGT	3 cut(s)	266, 652, 1042
TaiI	ACGT	4 cut(s)	317, 476, 575, 1258
TaqI	TCGA	9 cut(s)	74, 91, 218, 319, 393, 495, 1400, 1464, 1651
TasI	AATT	9 cut(s)	169, 622, 770, 978, 1184, 1320, 1367, 1927, 1951
TatI	WGTACW	2 cut(s)	173, 513
TauI	GCSGC	1 cut(s)	889
TfiI	GAWTC	9 cut(s)	16, 76, 240, 376, 807, 1126, 1171, 1418, 1811
Tru1I	TTAA	5 cut(s)	1311, 1553, 1634, 1760, 1982
Tru9I	TTAA	5 cut(s)	1311, 1553, 1634, 1760, 1982
TscAI	CASTG	5 cut(s)	647, 917, 1566, 1938, 1971
TseFI	GTSAC	3 cut(s)	55, 568, 1866
TseI	GCWGC	6 cut(s)	423, 507, 607, 735, 1598, 1913
Tsp45I	GTSAC	3 cut(s)	55, 568, 1866
TspGWI	ACGGA	2 cut(s)	362, 690
TspRI	CASTG	5 cut(s)	647, 917, 1566, 1938, 1971
Tth111I	GACNNNGTC	1 cut(s)	562
VpaK11BI	GGWCC	1 cut(s)	113
XapI	RAATTY	3 cut(s)	770, 1184, 1367
XspI	CTAG	6 cut(s)	35, 381, 860, 1833, 1860, 1917
ZraI	GACGTC	1 cut(s)	315
ZrmI	AGTACT	1 cut(s)	515
Zsp2I	ATGCAT	1 cut(s)	70

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.