pycom08g18970

Anthocyanidin 5,3-O-glucosyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0004234
Physical Location & Seq
Reverse (-)
19036649 .. 19043159
6511 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1329 bp
ATGGGAGACGCCATAGTGCTGTACGCAGCTCCAGGAATGGGTCACATCATCTCCATGGTGGAGCTGGGCAAGCTCATCCTCAACCGCTACGGCCCCCACAAATTCTCCATCACCATTCTCTACACGTGCGGCAGCTTCTTCGACACACCTAGCATCCCCGCCTACATCCGCCGCATCTCCCACTCCCACCCTCCCATTTCCTTCCGCCAGTTCCCTCGCGTCGCCAATAAAATTACCCAAAACATCAGCGGCTTCGCAATCATGACCGACTTCATCCGCCAGAACGATCCCCACGTCCGCCGTGCCCTCCAAGACGTCTCCAAATCCGCCGTCGTTCGCGCCTTCATCATTGACATCTTCTGCACCTCCGCGCTGACCATTGCCAAAGAATTCGACATCCCCACATACTACTTCTACGCTTCCGGTGCCGCAGCTCTGGCTGCTTTTCTGTATTTTCCTAAGATCCATGAACAAAACACCCAGAGTTTCAAGGACCTCACCGACATCGTTTTCAAATTGCCCGGACGGAAATCTCCCCTGAAGGCTATATACATGATGGAACCGGTGCTCGACCGAGATCGATCCTGGTTATTGGGACGTGTTCTCCTTTTGCTCACACCTTCCCAAATCCAACGGAATCATCGCCTGTGTGTTCCTGACGGGCCAACTCCGCCTGTGTACTACGTTGGACCATTGATTGACGATGAAAAAGAATCGCGTAATGATGCAGATGCGGCGGAGGAGGACTGCTTGTCCTGGCTCGATAAGCAGCCAAGTCAAAGCGTTGTATTTCTCTGTTTCGGAAGCAGGGGATCATTCCCTGCAATTCAGGTGAAGGAGATAGCGAAAGGGTTGGAGGCGAGTGGGCAGAGGTTCCTGTGGGTGGTGAAGAAGCCGCTGGTTGATGAGAAAATAAAGCAGGTCCTCGGAGTTGACGACTTTGATTTGGAGGGTGTGTTGCCAGAAGGGTTCTTGGAGAGGACCAAAGACAGGGGGATGGTAGTGAAGTCATGGGCGCCGCAGGTGGCGGTGTTGAAGAAGGAATCGGTTGGTGGGTTCGTGACGCATTGCGGATGGAACTCGGTGCTGGAAGCAGTTGTTGCGGGGGTGCCGATGATTGTTTGGCCACTGTACGCGGAGCAGCATATGAACAGGAATGTTCTGGTGACGGACATGGAAATGGCGATTGCGGTGGAGCAGAAAGATGAGGAAAATGGGTTTGTGAGCGGGGAGGAATTGGAGAGGAGAGTGAGGGAGTTGATGGAGTCGGAAGAAGGGAGAGTGCTTAGAGAGAGGAGCAAGAAAATTGGGGAGAGGTTGCAAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

443

Amino Acids

49.82

Weight (kDa)

6.53

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 257 - 391 7.4e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1012
AatII GACGTC 1 cut(s) 318
Acc36I ACCTGC 2 cut(s) 910, 1012
AccB1I GGYRCC 3 cut(s) 425, 1015, 1108
AccBSI CCGCTC 1 cut(s) 1227
AccII CGCG 5 cut(s) 219, 339, 371, 718, 1136
AclWI GGATC 4 cut(s) 281, 457, 576, 820
AcoI YGGCCR 1 cut(s) 1124
AcsI RAATTY 2 cut(s) 101, 389
AcuI CTGAAG 1 cut(s) 560
AcvI CACGTG 1 cut(s) 126
AcyI GRCGYC 3 cut(s) 9, 315, 1016
AfaI GTAC 3 cut(s) 23, 680, 1133
AfiI CCNNNNNNNGG 3 cut(s) 38, 883, 990
AflIII ACRYGT 2 cut(s) 123, 598
AgeI ACCGGT 1 cut(s) 562
AgsI TTSAA 3 cut(s) 490, 514, 1036
AhdI GACNNNNNGTC 1 cut(s) 751
AjiI CACGTC 2 cut(s) 295, 599
AjnI CCWGG 3 cut(s) 31, 584, 755
AluBI AGCT 5 cut(s) 29, 64, 73, 135, 434
AluI AGCT 5 cut(s) 29, 64, 73, 135, 434
Alw21I GWGCWC 1 cut(s) 570
Alw26I GTCTC 1 cut(s) 322
AlwI GGATC 4 cut(s) 281, 457, 576, 820
AoxI GGCC 3 cut(s) 91, 662, 1124
ApeKI GCWGC 6 cut(s) 26, 132, 431, 440, 769, 1141
ApoI RAATTY 2 cut(s) 101, 389
ArsI GACNNNNNNTTYG 2 cut(s) 315, 347
AsiGI ACCGGT 1 cut(s) 562
AspLEI GCGC 3 cut(s) 341, 373, 1018
AspS9I GGNCC 6 cut(s) 92, 493, 662, 689, 922, 981
AsuC2I CCSGG 1 cut(s) 522
AsuHPI GGTGA 5 cut(s) 103, 490, 844, 898, 1177
AvaII GGWCC 4 cut(s) 493, 689, 922, 981
BaeGI GKGCMC 1 cut(s) 307
BalI TGGCCA 1 cut(s) 1126
BanI GGYRCC 3 cut(s) 425, 1015, 1108
BarI GAAGNNNNNNTAC 2 cut(s) 533, 565
BbrPI CACGTG 1 cut(s) 126
Bbv12I GWGCWC 1 cut(s) 570
BbvI GCAGC 6 cut(s) 38, 144, 427, 443, 781, 1153
BccI CCATC 5 cut(s) 116, 550, 991, 1068, 1255
BceAI ACGGC 3 cut(s) 106, 285, 314
BcgI CGANNNNNNTGC 2 cut(s) 121, 155
BciT130I CCWGG 3 cut(s) 33, 586, 757
BcnI CCSGG 1 cut(s) 522
BcoDI GTCTC 1 cut(s) 322
BfaI CTAG 1 cut(s) 150
BfoI RGCGCY 1 cut(s) 1019
BfuAI ACCTGC 2 cut(s) 910, 1012
Bme1390I CCNGG 4 cut(s) 33, 522, 586, 757
Bme18I GGWCC 4 cut(s) 493, 689, 922, 981
BmeRI GACNNNNNGTC 1 cut(s) 751
BmgBI CACGTC 2 cut(s) 295, 599
BmgT120I GGNCC 6 cut(s) 92, 493, 662, 689, 922, 981
BmiI GGNNCC 6 cut(s) 94, 427, 561, 875, 1017, 1110
BmrFI CCNGG 4 cut(s) 33, 522, 586, 757
BmsI GCATC 4 cut(s) 162, 183, 715, 721
BpmI CTGGAG 1 cut(s) 15
BpuMI CCSGG 1 cut(s) 522
Bsa29I ATCGAT 1 cut(s) 580
BsaAI YACGTR 1 cut(s) 126
BsaHI GRCGYC 3 cut(s) 9, 315, 1016
BsaJI CCNNGG 2 cut(s) 54, 925
BsaWI WCCGGW 2 cut(s) 422, 562
BsaXI ACNNNNNCTCC 8 cut(s) 35, 65, 89, 119, 588, 618, 941, 971
Bsc4I CCNNNNNNNGG 3 cut(s) 38, 883, 990
Bse118I RCCGGY 1 cut(s) 562
Bse1I ACTGG 1 cut(s) 208
Bse3DI GCAATG 2 cut(s) 378, 1066
BseBI CCWGG 3 cut(s) 33, 586, 757
BseCI ATCGAT 1 cut(s) 580
BseDI CCNNGG 2 cut(s) 54, 925
BseGI GGATG 7 cut(s) 75, 153, 165, 273, 396, 1002, 1079
BseLI CCNNNNNNNGG 3 cut(s) 38, 883, 990
BseMI GCAATG 2 cut(s) 378, 1066
BseNI ACTGG 1 cut(s) 208
BseRI GAGGAG 3 cut(s) 755, 1258, 1309
BseSI GKGCMC 1 cut(s) 307
BseXI GCAGC 6 cut(s) 38, 144, 427, 443, 781, 1153
BseYI CCCAGC 1 cut(s) 64
BsgI GTGCAG 1 cut(s) 346
Bsh1236I CGCG 5 cut(s) 219, 339, 371, 718, 1136
Bsh1285I CGRYCG 1 cut(s) 574
BshFI GGCC 3 cut(s) 93, 664, 1126
BshNI GGYRCC 3 cut(s) 425, 1015, 1108
BshTI ACCGGT 1 cut(s) 562
BshVI ATCGAT 1 cut(s) 580
BsiEI CGRYCG 1 cut(s) 574
BsiHKAI GWGCWC 1 cut(s) 570
BsiSI CCGG 3 cut(s) 423, 522, 563
BslFI GGGAC 1 cut(s) 609
BslI CCNNNNNNNGG 3 cut(s) 38, 883, 990
BsmAI GTCTC 1 cut(s) 322
BsmBI CGTCTC 1 cut(s) 322
BsmFI GGGAC 1 cut(s) 609
BsnI GGCC 3 cut(s) 93, 664, 1126
Bsp1286I GDGCHC 2 cut(s) 307, 570
Bsp143I GATC 5 cut(s) 286, 462, 577, 581, 812
Bsp19I CCATGG 1 cut(s) 54
BspANI GGCC 3 cut(s) 93, 664, 1126
BspDI ATCGAT 1 cut(s) 580
BspFNI CGCG 5 cut(s) 219, 339, 371, 718, 1136
BspHI TCATGA 1 cut(s) 261
BspLI GGNNCC 6 cut(s) 94, 427, 561, 875, 1017, 1110
BspMI ACCTGC 2 cut(s) 910, 1012
BspPI GGATC 4 cut(s) 281, 457, 576, 820
BspT107I GGYRCC 3 cut(s) 425, 1015, 1108
BsrBI CCGCTC 1 cut(s) 1227
BsrDI GCAATG 2 cut(s) 378, 1066
BsrFI RCCGGY 1 cut(s) 562
BsrI ACTGG 1 cut(s) 208
BssAI RCCGGY 1 cut(s) 562
BssECI CCNNGG 2 cut(s) 54, 925
BssMI GATC 5 cut(s) 286, 462, 577, 581, 812
BssNI GRCGYC 3 cut(s) 9, 315, 1016
BssT1I CCWWGG 1 cut(s) 54
Bst2UI CCWGG 3 cut(s) 33, 586, 757
Bst4CI ACNGT 1 cut(s) 1131
BstACI GRCGYC 3 cut(s) 9, 315, 1016
BstAPI GCANNNNNTGC 1 cut(s) 1100
BstBAI YACGTR 1 cut(s) 126
BstC8I GCNNGC 1 cut(s) 71
BstDEI CTNAG 2 cut(s) 459, 1286
BstDSI CCRYGG 1 cut(s) 54
BstF5I GGATG 7 cut(s) 75, 153, 165, 273, 396, 1002, 1079
BstFNI CGCG 5 cut(s) 219, 339, 371, 718, 1136
BstH2I RGCGCY 1 cut(s) 1019
BstHHI GCGC 3 cut(s) 341, 373, 1018
BstKTI GATC 5 cut(s) 289, 465, 580, 584, 815
BstMAI GTCTC 1 cut(s) 322
BstMBI GATC 5 cut(s) 286, 462, 577, 581, 812
BstMCI CGRYCG 1 cut(s) 574
BstMWI GCNNNNNNNGC 8 cut(s) 70, 425, 437, 440, 670, 734, 766, 1100
BstNI CCWGG 3 cut(s) 33, 586, 757
BstSCI CCNGG 4 cut(s) 31, 520, 584, 755
BstSLI GKGCMC 1 cut(s) 307
BstUI CGCG 5 cut(s) 219, 339, 371, 718, 1136
BstV1I GCAGC 6 cut(s) 38, 144, 427, 443, 781, 1153
BstX2I RGATCY 1 cut(s) 462
BstYI RGATCY 1 cut(s) 462
Bsu15I ATCGAT 1 cut(s) 580
BsuRI GGCC 3 cut(s) 93, 664, 1126
BsuTUI ATCGAT 1 cut(s) 580
BtgI CCRYGG 1 cut(s) 54
BtgZI GCGATG 1 cut(s) 626
BtrI CACGTC 2 cut(s) 295, 599
BtsCI GGATG 7 cut(s) 75, 153, 165, 273, 396, 1002, 1079
BtsIMutI CAGTG 1 cut(s) 1127
BveI ACCTGC 2 cut(s) 910, 1012
Cac8I GCNNGC 1 cut(s) 71
CciI TCATGA 1 cut(s) 261
CfoI GCGC 3 cut(s) 341, 373, 1018
Cfr10I RCCGGY 1 cut(s) 562
Cfr13I GGNCC 6 cut(s) 92, 493, 662, 689, 922, 981
ClaI ATCGAT 1 cut(s) 580
CseI GACGC 3 cut(s) 17, 208, 1072
Csp6I GTAC 3 cut(s) 22, 679, 1132
CspAI ACCGGT 1 cut(s) 562
CviAII CATG 6 cut(s) 55, 262, 467, 553, 1011, 1174
CviQI GTAC 3 cut(s) 22, 679, 1132
DdeI CTNAG 2 cut(s) 459, 1286
DinI GGCGCC 1 cut(s) 1017
DpnI GATC 5 cut(s) 288, 464, 579, 583, 814
DpnII GATC 5 cut(s) 286, 462, 577, 581, 812
DriI GACNNNNNGTC 1 cut(s) 751
EaeI YGGCCR 1 cut(s) 1124
Eam1105I GACNNNNNGTC 1 cut(s) 751
EciI GGCGGA 7 cut(s) 158, 194, 266, 287, 316, 660, 752
Eco130I CCWWGG 1 cut(s) 54
Eco47I GGWCC 4 cut(s) 493, 689, 922, 981
Eco57I CTGAAG 1 cut(s) 560
Eco72I CACGTG 1 cut(s) 126
EcoO109I RGGNCCY 2 cut(s) 493, 922
EcoRI GAATTC 1 cut(s) 389
EcoRII CCWGG 3 cut(s) 31, 584, 755
EcoT14I CCWWGG 1 cut(s) 54
EgeI GGCGCC 1 cut(s) 1017
EheI GGCGCC 1 cut(s) 1017
ErhI CCWWGG 1 cut(s) 54
Esp3I CGTCTC 1 cut(s) 322
FaeI CATG 6 cut(s) 58, 265, 470, 556, 1014, 1177
FaqI GGGAC 1 cut(s) 609
FatI CATG 6 cut(s) 54, 261, 466, 552, 1010, 1173
FauI CCCGC 3 cut(s) 166, 1096, 1220
FauNDI CATATG 1 cut(s) 1146
FokI GGATG 7 cut(s) 62, 140, 152, 260, 383, 1009, 1086
FspBI CTAG 1 cut(s) 150
GlaI GCGC 3 cut(s) 340, 372, 1017
GsaI CCCAGC 1 cut(s) 68
GsuI CTGGAG 1 cut(s) 15
HaeII RGCGCY 1 cut(s) 1019
HaeIII GGCC 3 cut(s) 93, 664, 1126
HapII CCGG 3 cut(s) 423, 522, 563
HgaI GACGC 3 cut(s) 17, 208, 1072
HhaI GCGC 3 cut(s) 341, 373, 1018
Hin1I GRCGYC 3 cut(s) 9, 315, 1016
Hin1II CATG 6 cut(s) 58, 265, 470, 556, 1014, 1177
Hin6I GCGC 3 cut(s) 339, 371, 1016
HinP1I GCGC 3 cut(s) 339, 371, 1016
HincII GTYRAC 1 cut(s) 934
HindII GTYRAC 1 cut(s) 934
HinfI GANTC 4 cut(s) 637, 713, 1043, 1265
HpaII CCGG 3 cut(s) 423, 522, 563
HphI GGTGA 5 cut(s) 103, 490, 844, 898, 1177
Hpy166II GTNNAC 2 cut(s) 679, 934
Hpy188I TCNGA 3 cut(s) 803, 929, 1270
Hpy188III TCNNGA 3 cut(s) 262, 656, 1060
Hpy8I GTNNAC 2 cut(s) 679, 934
Hpy99I CGWCG 2 cut(s) 224, 335
HpyAV CCTTC 8 cut(s) 211, 352, 535, 630, 829, 959, 1033, 1268
HpyCH4III ACNGT 1 cut(s) 1131
HpyCH4IV ACGT 5 cut(s) 125, 294, 315, 598, 684
HpyCH4V TGCA 4 cut(s) 363, 728, 824, 1321
HpyF10VI GCNNNNNNNGC 8 cut(s) 70, 425, 437, 440, 670, 734, 766, 1100
HpyF3I CTNAG 2 cut(s) 459, 1286
HpySE526I ACGT 5 cut(s) 125, 294, 315, 598, 684
Hsp92I GRCGYC 3 cut(s) 9, 315, 1016
Hsp92II CATG 6 cut(s) 58, 265, 470, 556, 1014, 1177
HspAI GCGC 3 cut(s) 339, 371, 1016
KasI GGCGCC 1 cut(s) 1015
Kzo9I GATC 5 cut(s) 286, 462, 577, 581, 812
LmnI GCTCC 5 cut(s) 34, 61, 1138, 1195, 1296
Lsp1109I GCAGC 6 cut(s) 38, 144, 427, 443, 781, 1153
LweI GCATC 4 cut(s) 162, 183, 715, 721
MaeI CTAG 1 cut(s) 150
MaeII ACGT 5 cut(s) 125, 294, 315, 598, 684
MaeIII GTNAC 3 cut(s) 41, 1060, 1165
MalI GATC 5 cut(s) 288, 464, 579, 583, 814
MbiI CCGCTC 1 cut(s) 1227
MboI GATC 5 cut(s) 286, 462, 577, 581, 812
MboII GAAGA 5 cut(s) 130, 349, 901, 1048, 1283
MflI RGATCY 1 cut(s) 462
MhlI GDGCHC 2 cut(s) 307, 570
MlsI TGGCCA 1 cut(s) 1126
MluCI AATT 7 cut(s) 101, 231, 389, 515, 825, 1235, 1305
MluNI TGGCCA 1 cut(s) 1126
Mly113I GGCGCC 1 cut(s) 1016
MlyI GAGTC 1 cut(s) 1274
MmeI TCCRAC 4 cut(s) 655, 667, 834, 1248
Mox20I TGGCCA 1 cut(s) 1126
MscI TGGCCA 1 cut(s) 1126
MslI CAYNNNNRTG 2 cut(s) 53, 1178
Msp20I TGGCCA 1 cut(s) 1126
MspA1I CMGCKG 2 cut(s) 249, 898
MspI CCGG 3 cut(s) 423, 522, 563
MspR9I CCNGG 4 cut(s) 33, 522, 586, 757
MvaI CCWGG 3 cut(s) 33, 586, 757
MvnI CGCG 5 cut(s) 219, 339, 371, 718, 1136
MwoI GCNNNNNNNGC 8 cut(s) 70, 425, 437, 440, 670, 734, 766, 1100
NarI GGCGCC 1 cut(s) 1016
NciI CCSGG 1 cut(s) 522
NcoI CCATGG 1 cut(s) 54
NdeI CATATG 1 cut(s) 1146
NdeII GATC 5 cut(s) 286, 462, 577, 581, 812
NlaIII CATG 6 cut(s) 58, 265, 470, 556, 1014, 1177
NlaIV GGNNCC 6 cut(s) 94, 427, 561, 875, 1017, 1110
NmuCI GTSAC 3 cut(s) 41, 1060, 1165
PagI TCATGA 1 cut(s) 261
PaqCI CACCTGC 1 cut(s) 1012
PcsI WCGNNNNNNNCGW 2 cut(s) 291, 933
PfeI GAWTC 3 cut(s) 637, 713, 1043
PfoI TCCNGGA 1 cut(s) 31
PinAI ACCGGT 1 cut(s) 562
PleI GAGTC 1 cut(s) 1273
PluTI GGCGCC 1 cut(s) 1019
PmaCI CACGTG 1 cut(s) 126
PmlI CACGTG 1 cut(s) 126
PpsI GAGTC 1 cut(s) 1273
Ppu21I YACGTR 1 cut(s) 126
PpuMI RGGWCCY 2 cut(s) 493, 922
Psp5II RGGWCCY 2 cut(s) 493, 922
Psp6I CCWGG 3 cut(s) 31, 584, 755
PspCI CACGTG 1 cut(s) 126
PspFI CCCAGC 1 cut(s) 64
PspGI CCWGG 3 cut(s) 31, 584, 755
PspN4I GGNNCC 6 cut(s) 94, 427, 561, 875, 1017, 1110
PspPI GGNCC 6 cut(s) 92, 493, 662, 689, 922, 981
PspPPI RGGWCCY 2 cut(s) 493, 922
PsuI RGATCY 1 cut(s) 462
RsaI GTAC 3 cut(s) 23, 680, 1133
RsaNI GTAC 3 cut(s) 22, 679, 1132
RseI CAYNNNNRTG 2 cut(s) 53, 1178
Sau3AI GATC 5 cut(s) 286, 462, 577, 581, 812
Sau96I GGNCC 6 cut(s) 92, 493, 662, 689, 922, 981
SchI GAGTC 1 cut(s) 1274
ScrFI CCNGG 4 cut(s) 33, 522, 586, 757
SduI GDGCHC 2 cut(s) 307, 570
SfaNI GCATC 4 cut(s) 162, 183, 715, 721
SfoI GGCGCC 1 cut(s) 1017
SinI GGWCC 4 cut(s) 493, 689, 922, 981
SmiMI CAYNNNNRTG 2 cut(s) 53, 1178
Sse9I AATT 7 cut(s) 101, 231, 389, 515, 825, 1235, 1305
SspDI GGCGCC 1 cut(s) 1015
SspMI CTAG 1 cut(s) 150
StyD4I CCNGG 4 cut(s) 31, 520, 584, 755
StyI CCWWGG 1 cut(s) 54
TaaI ACNGT 1 cut(s) 1131
TaiI ACGT 5 cut(s) 128, 297, 318, 601, 687
TaqI TCGA 5 cut(s) 141, 393, 570, 580, 762
TaqII GACCGA 2 cut(s) 281, 588
TasI AATT 7 cut(s) 101, 231, 389, 515, 825, 1235, 1305
TatI WGTACW 1 cut(s) 678
TauI GCSGC 7 cut(s) 132, 174, 252, 431, 737, 898, 1021
TfiI GAWTC 3 cut(s) 637, 713, 1043
TscAI CASTG 1 cut(s) 1134
TseFI GTSAC 3 cut(s) 41, 1060, 1165
TseI GCWGC 6 cut(s) 26, 132, 431, 440, 769, 1141
Tsp45I GTSAC 3 cut(s) 41, 1060, 1165
TspDTI ATGAA 5 cut(s) 262, 334, 483, 720, 1163
TspGWI ACGGA 3 cut(s) 541, 649, 1184
TspRI CASTG 1 cut(s) 1134
VpaK11BI GGWCC 4 cut(s) 493, 689, 922, 981
XapI RAATTY 2 cut(s) 101, 389
XcmI CCANNNNNNNNNTGG 1 cut(s) 61
XspI CTAG 1 cut(s) 150
ZraI GACGTC 1 cut(s) 316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.